RchiOBHm_Chr5g0059111

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000082
Physical Location & Seq
Forward (+)
64004898 .. 64009872
4975 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33572

Sequence Viewer

Length: 1308 bp
ATGGCGGATTACCTACCCGAACATCTGATAGTTCAAATCCTGCAGAGGTTGCCGATCAAATCCCTAATCCGCTTCACCTCCGTTTCGAAACGCTGGCGTCTCATCATATTGTCGGACCCAAATTTCGCCAAATCCCAATTCCAGCAATCCCGGAGTCGCAGAGTCCTCTGCCTCGACCGCAAAGAATCTGAGTTCGATTCCCGGGACATGGAGTCGCCGTGGTCCACTGGAGAAAGCTCTACTGACAGAAAGCTCAGCTGCCCATTCAAGCAGCCGGGCTATAATCTCAACGCACTCTTCTCCTGCAATGGTTTAGTATGTGCAGCTCTGTCTGATCGAAACTGGACCGATTTGAACATCTATCTCTGGAACCCATCAACTCAGTTCTTCAAAAAACTACCCGGTGCTCCCTTACGATTTCCATTTACACGCTGTTATGGTTTTGGCTACTTGTCAGCCACTGGCGACTACAGAGTTCTCATAGGCAACTTCTGCACATTGAACAATAACCACCACATCTTCTCATCGAACACTAACAGTTGGAAAAGTATCCAATCCCCTTTACCTGTCCAAAGAGACGATCAGTGGATTCTTTCAAATGAGGCACTTCATTCGGTTGAGAAGGAGATACTTGCTTTCGATTTAAACCATGATAAGTTTCAAACAATGCCGCTGCCTGACCCGGAACCGGGTCAGTATATCAGAGAGCTAGGGGACTTTAGAGGCTGCCTGTGTGCATTTGATTATAAGAATCAATGTATTGGCTTTATTGATTTGTGGGTCATGAAAGAATATAACGTGGGTGAGTCCTGGACTAAGTTCTTTACCTTAAAGATTTTTGATCTGCAGCCTATGGTTGTACGTTATTTAAGGCCGATCATGGTTATGGAAACTAGTACAATTCTGGAGATAGAGCTTTCTAATGATCGTAGGCTTATTGATACTGAGTTCAAGTTGATAAAGAGTTGTCATAAGGAAGAGAAGTTTGAAACACATAAGATTAGCAGGAAGATGTATGCCAAAATGATTGGATATGAAGAGAGTCTACTTTGGCTTGGAGTCCATAACAACAGGAACTGCCCTATGGAACTAGCCAAGAAGGCTAGGAATGCTTCAGAAGCTGAGGGGCAGAATAATGGAGAACAAGGCAGAATGAATAGTGTCAATGTGGCTAACCAAGGGTCAAATCCTGTCAATGTGTGTGTTCAAAACCATGGCAGCAGCTCTGTTGATGTCCAACTGCAAACAAAACAGGCAACTGTAAAGGAGCAGGTCAGCAGAGCACCAAAGAGATCAAGAAAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

435

Amino Acids

50.24

Weight (kDa)

8.88

Isoelectric Point (pI)

53.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 39 9.3e-08 F-box-like
F-box PF00646 5 - 42 2.7e-09 F-box domain
FBA_3 PF08268 76 - 273 8.5e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 747
Acc36I ACCTGC 1 cut(s) 1261
AccI GTMKAC 1 cut(s) 1045
AciI CCGC 4 cut(s) 5, 70, 178, 671
AcsI RAATTY 1 cut(s) 121
AcuI CTGAAG 1 cut(s) 1098
AcyI GRCGYC 1 cut(s) 97
AfaI GTAC 2 cut(s) 861, 898
AfiI CCNNNNNNNGG 3 cut(s) 208, 688, 689
AhdI GACNNNNNGTC 1 cut(s) 211
AhlI ACTAGT 1 cut(s) 893
AjnI CCWGG 1 cut(s) 809
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 8 cut(s) 237, 253, 258, 326, 709, 916, 1121, 1224
AluI AGCT 8 cut(s) 237, 253, 258, 326, 709, 916, 1121, 1224
Alw21I GWGCWC 2 cut(s) 409, 1285
Alw26I GTCTC 2 cut(s) 104, 570
AlwNI CAGNNNCTG 3 cut(s) 461, 1077, 1121
Ama87I CYCGRG 1 cut(s) 201
AoxI GGCC 1 cut(s) 872
ApeKI GCWGC 8 cut(s) 258, 271, 323, 673, 726, 847, 1218, 1221
ApoI RAATTY 1 cut(s) 121
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AspS9I GGNCC 3 cut(s) 115, 222, 345
AsuC2I CCSGG 7 cut(s) 151, 202, 203, 276, 402, 683, 690
AsuHPI GGTGA 2 cut(s) 67, 815
AsuII TTCGAA 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 201
AvaII GGWCC 3 cut(s) 115, 222, 345
BarI GAAGNNNNNNTAC 2 cut(s) 1029, 1061
Bbv12I GWGCWC 2 cut(s) 409, 1285
BbvCI CCTCAGC 1 cut(s) 1122
BbvI GCAGC 8 cut(s) 245, 283, 335, 660, 713, 859, 1230, 1233
BccI CCATC 1 cut(s) 382
BceAI ACGGC 1 cut(s) 202
BcgI CGANNNNNNTGC 2 cut(s) 594, 628
BciT130I CCWGG 1 cut(s) 811
BciVI GTATCC 1 cut(s) 560
BcnI CCSGG 7 cut(s) 151, 202, 203, 276, 402, 683, 690
BcoDI GTCTC 2 cut(s) 104, 570
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 4 cut(s) 710, 894, 1091, 1104
BfmI CTRYAG 3 cut(s) 41, 469, 845
BfuAI ACCTGC 1 cut(s) 1261
BfuI GTATCC 1 cut(s) 560
BglI GCCNNNNNGGC 1 cut(s) 1100
BisI GCNGC 9 cut(s) 259, 272, 324, 671, 674, 727, 848, 1219, 1222
BlpI GCTNAGC 1 cut(s) 254
BlsI GCNGC 9 cut(s) 260, 273, 325, 672, 675, 728, 849, 1220, 1223
Bme1390I CCNGG 8 cut(s) 151, 202, 203, 276, 402, 683, 690, 811
Bme18I GGWCC 3 cut(s) 115, 222, 345
BmeRI GACNNNNNGTC 1 cut(s) 211
BmeT110I CYCGRG 1 cut(s) 201
BmgT120I GGNCC 3 cut(s) 115, 222, 345
BmiI GGNNCC 3 cut(s) 117, 371, 687
BmrFI CCNGG 8 cut(s) 151, 202, 203, 276, 402, 683, 690, 811
BpmI CTGGAG 2 cut(s) 249, 926
Bpu10I CCTNAGC 1 cut(s) 1122
Bpu1102I GCTNAGC 1 cut(s) 254
Bpu14I TTCGAA 1 cut(s) 86
BpuMI CCSGG 7 cut(s) 151, 202, 203, 276, 402, 683, 690
BsaHI GRCGYC 1 cut(s) 97
BsaJI CCNNGG 4 cut(s) 201, 218, 1177, 1213
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 3 cut(s) 208, 688, 689
Bse1I ACTGG 3 cut(s) 232, 347, 466
Bse3DI GCAATG 1 cut(s) 313
BseBI CCWGG 1 cut(s) 811
BseDI CCNNGG 4 cut(s) 201, 218, 1177, 1213
BseLI CCNNNNNNNGG 3 cut(s) 208, 688, 689
BseMI GCAATG 1 cut(s) 313
BseMII CTCAG 5 cut(s) 180, 268, 395, 936, 1113
BseNI ACTGG 3 cut(s) 232, 347, 466
BseXI GCAGC 8 cut(s) 245, 283, 335, 660, 713, 859, 1230, 1233
BsgI GTGCAG 2 cut(s) 342, 478
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 1 cut(s) 874
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 2 cut(s) 409, 1285
BsiHKCI CYCGRG 1 cut(s) 201
BsiSI CCGG 6 cut(s) 151, 202, 275, 402, 683, 689
BslFI GGGAC 2 cut(s) 218, 728
BslI CCNNNNNNNGG 3 cut(s) 208, 688, 689
BsmAI GTCTC 2 cut(s) 104, 570
BsmBI CGTCTC 2 cut(s) 104, 570
BsmFI GGGAC 2 cut(s) 218, 728
BsmI GAATGC 1 cut(s) 1114
BsnI GGCC 1 cut(s) 874
BsoBI CYCGRG 1 cut(s) 201
Bsp119I TTCGAA 1 cut(s) 86
Bsp1286I GDGCHC 2 cut(s) 409, 1285
Bsp143I GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
Bsp1720I GCTNAGC 1 cut(s) 254
Bsp19I CCATGG 1 cut(s) 1213
BspACI CCGC 4 cut(s) 5, 70, 178, 671
BspANI GGCC 1 cut(s) 874
BspCNI CTCAG 5 cut(s) 181, 267, 394, 937, 1114
BspHI TCATGA 1 cut(s) 783
BspLI GGNNCC 3 cut(s) 117, 371, 687
BspMAI CTGCAG 2 cut(s) 45, 849
BspMI ACCTGC 1 cut(s) 1261
BspT104I TTCGAA 1 cut(s) 86
BsrDI GCAATG 1 cut(s) 313
BsrI ACTGG 3 cut(s) 232, 347, 466
BssECI CCNNGG 4 cut(s) 201, 218, 1177, 1213
BssMI GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
BssNI GRCGYC 1 cut(s) 97
BssT1I CCWWGG 2 cut(s) 1177, 1213
Bst2UI CCWGG 1 cut(s) 811
Bst4CI ACNGT 2 cut(s) 539, 1261
Bst6I CTCTTC 3 cut(s) 302, 972, 1032
BstACI GRCGYC 1 cut(s) 97
BstAPI GCANNNNNTGC 2 cut(s) 49, 492
BstBI TTCGAA 1 cut(s) 86
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 6 cut(s) 189, 254, 381, 816, 945, 1122
BstDSI CCRYGG 2 cut(s) 218, 1213
BstKTI GATC 7 cut(s) 57, 337, 583, 844, 879, 928, 1295
BstMAI GTCTC 2 cut(s) 104, 570
BstMBI GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
BstMCI CGRYCG 1 cut(s) 178
BstMWI GCNNNNNNNGC 6 cut(s) 49, 177, 492, 1100, 1109, 1118
BstNI CCWGG 1 cut(s) 811
BstSCI CCNGG 8 cut(s) 149, 200, 201, 274, 400, 681, 688, 809
BstSFI CTRYAG 3 cut(s) 41, 469, 845
BstV1I GCAGC 8 cut(s) 245, 283, 335, 660, 713, 859, 1230, 1233
BsuI GTATCC 1 cut(s) 560
BsuRI GGCC 1 cut(s) 874
BtgI CCRYGG 2 cut(s) 218, 1213
BtsIMutI CAGTG 3 cut(s) 225, 459, 590
BveI ACCTGC 1 cut(s) 1261
Cac8I GCNNGC 1 cut(s) 95
CaiI CAGNNNCTG 3 cut(s) 461, 1077, 1121
CciI TCATGA 1 cut(s) 783
Cfr13I GGNCC 3 cut(s) 115, 222, 345
Cfr9I CCCGGG 1 cut(s) 201
CseI GACGC 1 cut(s) 86
Csp6I GTAC 2 cut(s) 860, 897
CviAII CATG 5 cut(s) 208, 650, 784, 880, 1214
CviQI GTAC 2 cut(s) 860, 897
DdeI CTNAG 6 cut(s) 189, 254, 381, 816, 945, 1122
DpnI GATC 7 cut(s) 56, 336, 582, 843, 878, 927, 1294
DpnII GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
DraI TTTAAA 1 cut(s) 645
DriI GACNNNNNGTC 1 cut(s) 211
Eam1104I CTCTTC 3 cut(s) 302, 972, 1032
Eam1105I GACNNNNNGTC 1 cut(s) 211
EarI CTCTTC 3 cut(s) 302, 972, 1032
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 1177, 1213
Eco47I GGWCC 3 cut(s) 115, 222, 345
Eco57I CTGAAG 1 cut(s) 1098
Eco88I CYCGRG 1 cut(s) 201
EcoRII CCWGG 1 cut(s) 809
EcoT14I CCWWGG 2 cut(s) 1177, 1213
ErhI CCWWGG 2 cut(s) 1177, 1213
Esp3I CGTCTC 2 cut(s) 104, 570
FaeI CATG 5 cut(s) 211, 653, 787, 883, 1217
FaqI GGGAC 2 cut(s) 218, 728
FatI CATG 5 cut(s) 207, 649, 783, 879, 1213
FblI GTMKAC 1 cut(s) 1045
Fnu4HI GCNGC 9 cut(s) 259, 272, 324, 671, 674, 727, 848, 1219, 1222
Fsp4HI GCNGC 9 cut(s) 259, 272, 324, 671, 674, 727, 848, 1219, 1222
FspBI CTAG 4 cut(s) 710, 894, 1091, 1104
GluI GCNGC 9 cut(s) 259, 272, 324, 671, 674, 727, 848, 1219, 1222
GsuI CTGGAG 2 cut(s) 249, 926
HaeIII GGCC 1 cut(s) 874
HapII CCGG 6 cut(s) 151, 202, 275, 402, 683, 689
HgaI GACGC 1 cut(s) 86
Hin1I GRCGYC 1 cut(s) 97
Hin1II CATG 5 cut(s) 211, 653, 787, 883, 1217
HpaII CCGG 6 cut(s) 151, 202, 275, 402, 683, 689
HphI GGTGA 2 cut(s) 67, 815
Hpy166II GTNNAC 2 cut(s) 225, 1046
Hpy188I TCNGA 6 cut(s) 27, 115, 190, 334, 704, 1117
Hpy188III TCNNGA 4 cut(s) 367, 784, 905, 1296
Hpy8I GTNNAC 2 cut(s) 225, 1046
HpyAV CCTTC 2 cut(s) 616, 1093
HpyCH4III ACNGT 2 cut(s) 539, 1261
HpyCH4IV ACGT 2 cut(s) 798, 862
HpyCH4V TGCA 7 cut(s) 43, 306, 323, 495, 737, 847, 1243
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 177, 492, 1100, 1109, 1118
HpyF3I CTNAG 6 cut(s) 189, 254, 381, 816, 945, 1122
HpySE526I ACGT 2 cut(s) 798, 862
Hsp92I GRCGYC 1 cut(s) 97
Hsp92II CATG 5 cut(s) 211, 653, 787, 883, 1217
Kzo9I GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
LmnI GCTCC 2 cut(s) 412, 1267
Lsp1109I GCAGC 8 cut(s) 245, 283, 335, 660, 713, 859, 1230, 1233
MaeI CTAG 4 cut(s) 710, 894, 1091, 1104
MaeII ACGT 2 cut(s) 798, 862
MalI GATC 7 cut(s) 56, 336, 582, 843, 878, 927, 1294
MboI GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
MboII GAAGA 6 cut(s) 289, 379, 511, 989, 1021, 1049
MhlI GDGCHC 2 cut(s) 409, 1285
MluCI AATT 3 cut(s) 121, 137, 900
MlyI GAGTC 6 cut(s) 163, 171, 221, 815, 1051, 1068
MmeI TCCRAC 3 cut(s) 93, 521, 1261
MnlI CCTC 7 cut(s) 39, 88, 176, 182, 595, 716, 1117
MseI TTAA 3 cut(s) 644, 830, 869
MslI CAYNNNNRTG 1 cut(s) 884
MspA1I CMGCKG 2 cut(s) 258, 673
MspI CCGG 6 cut(s) 151, 202, 275, 402, 683, 689
MspR9I CCNGG 8 cut(s) 151, 202, 203, 276, 402, 683, 690, 811
Mva1269I GAATGC 1 cut(s) 1114
MvaI CCWGG 1 cut(s) 811
MwoI GCNNNNNNNGC 6 cut(s) 49, 177, 492, 1100, 1109, 1118
NciI CCSGG 7 cut(s) 151, 202, 203, 276, 402, 683, 690
NcoI CCATGG 1 cut(s) 1213
NdeII GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
NlaIII CATG 5 cut(s) 211, 653, 787, 883, 1217
NlaIV GGNNCC 3 cut(s) 117, 371, 687
NspV TTCGAA 1 cut(s) 86
PagI TCATGA 1 cut(s) 783
PctI GAATGC 1 cut(s) 1114
PfeI GAWTC 4 cut(s) 185, 197, 589, 751
PfoI TCCNGGA 2 cut(s) 149, 809
PkrI GCNGC 9 cut(s) 260, 273, 325, 672, 675, 728, 849, 1220, 1223
PleI GAGTC 6 cut(s) 162, 170, 220, 814, 1050, 1067
PpsI GAGTC 6 cut(s) 162, 170, 220, 814, 1050, 1067
PsiI TTATAA 1 cut(s) 747
Psp6I CCWGG 1 cut(s) 809
PspGI CCWGG 1 cut(s) 809
PspN4I GGNNCC 3 cut(s) 117, 371, 687
PspPI GGNCC 3 cut(s) 115, 222, 345
PstI CTGCAG 2 cut(s) 45, 849
PstNI CAGNNNCTG 3 cut(s) 461, 1077, 1121
PvuII CAGCTG 1 cut(s) 258
RsaI GTAC 2 cut(s) 861, 898
RsaNI GTAC 2 cut(s) 860, 897
RseI CAYNNNNRTG 1 cut(s) 884
SaqAI TTAA 3 cut(s) 644, 830, 869
SatI GCNGC 9 cut(s) 259, 272, 324, 671, 674, 727, 848, 1219, 1222
Sau3AI GATC 7 cut(s) 54, 334, 580, 841, 876, 925, 1292
Sau96I GGNCC 3 cut(s) 115, 222, 345
SchI GAGTC 6 cut(s) 163, 171, 221, 815, 1051, 1068
ScrFI CCNGG 8 cut(s) 151, 202, 203, 276, 402, 683, 690, 811
SduI GDGCHC 2 cut(s) 409, 1285
SfcI CTRYAG 3 cut(s) 41, 469, 845
SfuI TTCGAA 1 cut(s) 86
SinI GGWCC 3 cut(s) 115, 222, 345
SmaI CCCGGG 1 cut(s) 203
SmiMI CAYNNNNRTG 1 cut(s) 884
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 3 cut(s) 121, 137, 900
SsiI CCGC 4 cut(s) 5, 70, 178, 671
SspMI CTAG 4 cut(s) 710, 894, 1091, 1104
StyD4I CCNGG 8 cut(s) 149, 200, 201, 274, 400, 681, 688, 809
StyI CCWWGG 2 cut(s) 1177, 1213
TaaI ACNGT 2 cut(s) 539, 1261
TaiI ACGT 2 cut(s) 801, 865
TaqI TCGA 6 cut(s) 86, 174, 195, 337, 527, 639
TaqII GACCGA 1 cut(s) 362
TasI AATT 3 cut(s) 121, 137, 900
TatI WGTACW 1 cut(s) 896
TauI GCSGC 1 cut(s) 673
TfiI GAWTC 4 cut(s) 185, 197, 589, 751
Tru1I TTAA 3 cut(s) 644, 830, 869
Tru9I TTAA 3 cut(s) 644, 830, 869
TscAI CASTG 3 cut(s) 232, 466, 590
TseI GCWGC 8 cut(s) 258, 271, 323, 673, 726, 847, 1218, 1221
TspDTI ATGAA 4 cut(s) 599, 800, 1050, 1169
TspGWI ACGGA 1 cut(s) 70
TspMI CCCGGG 1 cut(s) 201
TspRI CASTG 3 cut(s) 232, 466, 590
VpaK11BI GGWCC 3 cut(s) 115, 222, 345
XapI RAATTY 1 cut(s) 121
XmaI CCCGGG 1 cut(s) 201
XmiI GTMKAC 1 cut(s) 1045
XspI CTAG 4 cut(s) 710, 894, 1091, 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.