RchiOBHm_Chr2g0109731

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
21085841 .. 21089830
3990 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48354

Sequence Viewer

Length: 1248 bp
ATGGTGGTTATGGCTTCTCCAAAGGCAACGCCAACGACGATGGAAGACCTCCCCATAGAAATTTTGATGCAAATATTCGATAGGTTATCCCTTAAACTATTAATCCAATTCAGCTGCGCTTCTAAGCGATGGAGGTCCCTTGTCGTCTCAAATCCCCAGTTCGCCAAATCGTACTTCAAGCTGAAAAAACTCTTGCTCGCCACCTCTTCTCAATTCGAATCCCTAAACTTGGAAAACTCGTCGTTTGGGGACGATTCTTCTGTCCGAAAGCTCGCCTGCCCATTCAAGCAACCGGCCCACGCCGTCAACATACTGGGCTCATGCAATGGTATGGTGTTTGTTGCAGTCAATGTTCATGATGGCTTTTATATCTGGAACCCCTCCACTGGGCTGTGCCGCAAATTGCCCAACCCAGGTTTTGCCTCGACTAATACAGACTTGGACTTATCAAAAACCATTATATGTCTCCACCACTGTGGTTTTGGCTATGTTTCTGCCACTGACGACTACAAAGTTGTTGTGGCCGCTCACATTATGAATTCAACCATGCCTCTAGAGATCTTTTCATCCAGAGCTGGCTCTTGGAGAAGGATTGAATGCCCTCCCCACTTTTCCTCATCGGCCTATATGAGTAAAACGAGGGGGACTTTTACTAATGAGGCGCTCCATTGGCTCCAAAAACTGCGTGAGCCAGAGCTGGACACTCCCGGAAACACCATCGCTGCTTTTGATTTAGCCAAAGAAGAGTTTCGGCAAATGCCGCTGCCTCTTTTGGGGGAGACGAGTTCAGATAGGGATTGTTTTTTCAGTGACATAGGGATTGTTTTTGGAGGGTGCCTGTGTGTGTCGAGTTTTAAGAGGCAGAGATGGGGAGCCGGGCATCGTAGTCTGCATGTTCAATTATGGGTCATGATGGAGTATGGTGTTTGTGATTCTTGGACCAAGCTGTTTAGGTTTGAGATGGACGATGTTAACCTTAGCCTACCAATCTGCTGCACAGAAACAATGATAGTTATGTCGACATACAAACGTTGCAATCTGGAGTTGATCAGGTTTCATCATGATGAAGAGAAGCTTGACAATGTTGCGGTTTGTAGTAGTGATCGATATACGCTTAAGATGGGTCTCTGTGAAATGATAGATTATGATGAGACGCTGCTTTGGCTTCCTGATTCTAGGGCTGAGGGTGGTGATCGAAAAAAGACTCAAAACCCAACAGAAGCAGAAGTATTGAAGAGGAGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

415

Amino Acids

46.94

Weight (kDa)

6.6

Isoelectric Point (pI)

52.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 52 1.3e-09 F-box domain
F-box-like PF12937 15 - 51 1.6e-08 F-box-like
FBA_3 PF08268 78 - 315 2.1e-13 F-box associated beta propeller domain
FBA_1 PF07734 98 - 356 1.3e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 834
AccBSI CCGCTC 1 cut(s) 527
AccI GTMKAC 1 cut(s) 1019
AciI CCGC 4 cut(s) 397, 525, 761, 1088
AclI AACGTT 1 cut(s) 1030
AcoI YGGCCR 1 cut(s) 522
AcsI RAATTY 2 cut(s) 60, 538
AfaI GTAC 1 cut(s) 173
AfiI CCNNNNNNNGG 5 cut(s) 229, 386, 387, 413, 773
AflII CTTAAG 1 cut(s) 1115
AgsI TTSAA 6 cut(s) 178, 286, 543, 596, 899, 1234
AjnI CCWGG 1 cut(s) 412
AjuI GAANNNNNNNTTGG 2 cut(s) 158, 190
AleI CACNNNNGTG 1 cut(s) 474
AluBI AGCT 7 cut(s) 114, 181, 271, 575, 697, 946, 1075
AluI AGCT 7 cut(s) 114, 181, 271, 575, 697, 946, 1075
Alw26I GTCTC 5 cut(s) 151, 470, 773, 1130, 1145
AoxI GGCC 3 cut(s) 294, 522, 621
ApeKI GCWGC 5 cut(s) 114, 722, 763, 993, 1156
ApoI RAATTY 2 cut(s) 60, 538
AseI ATTAAT 1 cut(s) 101
Asp700I GAANNNNTTC 1 cut(s) 747
AspLEI GCGC 2 cut(s) 119, 664
AspS9I GGNCC 3 cut(s) 135, 295, 939
AsuC2I CCSGG 2 cut(s) 708, 877
AsuHPI GGTGA 1 cut(s) 1202
AsuII TTCGAA 1 cut(s) 216
AvaII GGWCC 2 cut(s) 135, 939
BanI GGYRCC 1 cut(s) 834
BanII GRGCYC 1 cut(s) 320
BbsI GAAGAC 1 cut(s) 51
BbvCI CCTCAGC 1 cut(s) 1182
BbvI GCAGC 5 cut(s) 101, 709, 750, 980, 1143
BccI CCATC 8 cut(s) 34, 123, 353, 725, 861, 907, 955, 1114
BceAI ACGGC 1 cut(s) 287
BciT130I CCWGG 1 cut(s) 414
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 2 cut(s) 708, 877
BcoDI GTCTC 5 cut(s) 151, 470, 773, 1130, 1145
BfaI CTAG 2 cut(s) 554, 1176
BfoI RGCGCY 1 cut(s) 665
BfrI CTTAAG 1 cut(s) 1115
BglII AGATCT 1 cut(s) 558
BisI GCNGC 8 cut(s) 115, 397, 525, 723, 761, 764, 994, 1157
BlsI GCNGC 8 cut(s) 116, 398, 526, 724, 762, 765, 995, 1158
Bme1390I CCNGG 3 cut(s) 414, 708, 877
Bme18I GGWCC 2 cut(s) 135, 939
BmgT120I GGNCC 3 cut(s) 135, 295, 939
BmiI GGNNCC 5 cut(s) 137, 377, 674, 836, 874
BmrFI CCNGG 3 cut(s) 414, 708, 877
BmrI ACTGGG 3 cut(s) 151, 323, 396
BmsI GCATC 2 cut(s) 57, 889
BmuI ACTGGG 3 cut(s) 151, 323, 396
BpiI GAAGAC 1 cut(s) 51
BpmI CTGGAG 1 cut(s) 1061
Bpu10I CCTNAGC 2 cut(s) 977, 1182
Bpu14I TTCGAA 1 cut(s) 216
BpuMI CCSGG 2 cut(s) 708, 877
Bsa29I ATCGAT 1 cut(s) 1105
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 1 cut(s) 412
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 386, 387, 413, 773
Bse118I RCCGGY 1 cut(s) 292
Bse1I ACTGG 3 cut(s) 157, 318, 391
Bse3DI GCAATG 1 cut(s) 331
BseBI CCWGG 1 cut(s) 414
BseCI ATCGAT 1 cut(s) 1105
BseDI CCNNGG 1 cut(s) 412
BseGI GGATG 1 cut(s) 566
BseLI CCNNNNNNNGG 5 cut(s) 229, 386, 387, 413, 773
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 1 cut(s) 1173
BseNI ACTGG 3 cut(s) 157, 318, 391
BseXI GCAGC 5 cut(s) 101, 709, 750, 980, 1143
BsgI GTGCAG 1 cut(s) 979
BshFI GGCC 3 cut(s) 296, 524, 623
BshNI GGYRCC 1 cut(s) 834
BshVI ATCGAT 1 cut(s) 1105
BsiSI CCGG 3 cut(s) 293, 708, 876
BslFI GGGAC 3 cut(s) 121, 263, 658
BslI CCNNNNNNNGG 5 cut(s) 229, 386, 387, 413, 773
BsmAI GTCTC 5 cut(s) 151, 470, 773, 1130, 1145
BsmBI CGTCTC 3 cut(s) 151, 773, 1145
BsmFI GGGAC 3 cut(s) 121, 263, 658
BsmI GAATGC 1 cut(s) 602
BsnI GGCC 3 cut(s) 296, 524, 623
Bso31I GGTCTC 1 cut(s) 1130
Bsp119I TTCGAA 1 cut(s) 216
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 4 cut(s) 558, 1047, 1102, 1192
BspACI CCGC 4 cut(s) 397, 525, 761, 1088
BspANI GGCC 3 cut(s) 296, 524, 623
BspCNI CTCAG 1 cut(s) 1174
BspDI ATCGAT 1 cut(s) 1105
BspHI TCATGA 3 cut(s) 355, 909, 1060
BspLI GGNNCC 5 cut(s) 137, 377, 674, 836, 874
BspT104I TTCGAA 1 cut(s) 216
BspT107I GGYRCC 1 cut(s) 834
BspTI CTTAAG 1 cut(s) 1115
BspTNI GGTCTC 1 cut(s) 1130
BsrBI CCGCTC 1 cut(s) 527
BsrDI GCAATG 1 cut(s) 331
BsrFI RCCGGY 1 cut(s) 292
BsrI ACTGG 3 cut(s) 157, 318, 391
BssAI RCCGGY 1 cut(s) 292
BssECI CCNNGG 1 cut(s) 412
BssMI GATC 4 cut(s) 558, 1047, 1102, 1192
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 1 cut(s) 476
Bst6I CTCTTC 4 cut(s) 211, 738, 1062, 1229
BstAFI CTTAAG 1 cut(s) 1115
BstBI TTCGAA 1 cut(s) 216
BstC8I GCNNGC 4 cut(s) 198, 273, 277, 577
BstDEI CTNAG 3 cut(s) 123, 977, 1182
BstF5I GGATG 1 cut(s) 566
BstH2I RGCGCY 1 cut(s) 665
BstHHI GCGC 2 cut(s) 119, 664
BstKTI GATC 4 cut(s) 561, 1050, 1105, 1195
BstMAI GTCTC 5 cut(s) 151, 470, 773, 1130, 1145
BstMBI GATC 4 cut(s) 558, 1047, 1102, 1192
BstMWI GCNNNNNNNGC 3 cut(s) 670, 760, 1162
BstNI CCWGG 1 cut(s) 414
BstNSI RCATGY 1 cut(s) 896
BstSCI CCNGG 3 cut(s) 412, 706, 875
BstV1I GCAGC 5 cut(s) 101, 709, 750, 980, 1143
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 1 cut(s) 558
BstXI CCANNNNNNTGG 1 cut(s) 476
BstYI RGATCY 1 cut(s) 558
Bsu15I ATCGAT 1 cut(s) 1105
BsuRI GGCC 3 cut(s) 296, 524, 623
BsuTUI ATCGAT 1 cut(s) 1105
BtgZI GCGATG 2 cut(s) 142, 703
BtsCI GGATG 1 cut(s) 566
BtsIMutI CAGTG 4 cut(s) 384, 472, 498, 814
Cac8I GCNNGC 4 cut(s) 198, 273, 277, 577
CciI TCATGA 3 cut(s) 355, 909, 1060
CfoI GCGC 2 cut(s) 119, 664
Cfr10I RCCGGY 1 cut(s) 292
Cfr13I GGNCC 3 cut(s) 135, 295, 939
ClaI ATCGAT 1 cut(s) 1105
CseI GACGC 1 cut(s) 1162
Csp6I GTAC 1 cut(s) 172
CviAII CATG 6 cut(s) 321, 356, 547, 893, 910, 1061
CviQI GTAC 1 cut(s) 172
DdeI CTNAG 3 cut(s) 123, 977, 1182
DpnI GATC 4 cut(s) 560, 1049, 1104, 1194
DpnII GATC 4 cut(s) 558, 1047, 1102, 1192
EaeI YGGCCR 1 cut(s) 522
Eam1104I CTCTTC 4 cut(s) 211, 738, 1062, 1229
EarI CTCTTC 4 cut(s) 211, 738, 1062, 1229
Eco24I GRGCYC 1 cut(s) 320
Eco31I GGTCTC 1 cut(s) 1130
Eco47I GGWCC 2 cut(s) 135, 939
EcoO109I RGGNCCY 1 cut(s) 135
EcoRI GAATTC 1 cut(s) 538
EcoRII CCWGG 1 cut(s) 412
EcoT38I GRGCYC 1 cut(s) 320
Esp3I CGTCTC 3 cut(s) 151, 773, 1145
FaeI CATG 6 cut(s) 324, 359, 550, 896, 913, 1064
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 3 cut(s) 121, 263, 658
FatI CATG 6 cut(s) 320, 355, 546, 892, 909, 1060
FbaI TGATCA 1 cut(s) 1047
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 8 cut(s) 115, 397, 525, 723, 761, 764, 994, 1157
FokI GGATG 1 cut(s) 553
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 8 cut(s) 115, 397, 525, 723, 761, 764, 994, 1157
FspBI CTAG 2 cut(s) 554, 1176
GlaI GCGC 2 cut(s) 118, 663
GluI GCNGC 8 cut(s) 115, 397, 525, 723, 761, 764, 994, 1157
GsuI CTGGAG 1 cut(s) 1061
HaeII RGCGCY 1 cut(s) 665
HaeIII GGCC 3 cut(s) 296, 524, 623
HapII CCGG 3 cut(s) 293, 708, 876
HgaI GACGC 1 cut(s) 1162
HhaI GCGC 2 cut(s) 119, 664
Hin1II CATG 6 cut(s) 324, 359, 550, 896, 913, 1064
Hin6I GCGC 2 cut(s) 117, 662
HinP1I GCGC 2 cut(s) 117, 662
HincII GTYRAC 3 cut(s) 307, 973, 1020
HindII GTYRAC 3 cut(s) 307, 973, 1020
HindIII AAGCTT 1 cut(s) 1073
HinfI GANTC 5 cut(s) 218, 254, 932, 1172, 1204
HpaI GTTAAC 1 cut(s) 973
HpaII CCGG 3 cut(s) 293, 708, 876
HphI GGTGA 1 cut(s) 1202
Hpy166II GTNNAC 3 cut(s) 307, 973, 1020
Hpy188I TCNGA 2 cut(s) 266, 790
Hpy188III TCNNGA 8 cut(s) 356, 373, 554, 570, 910, 1040, 1061, 1169
Hpy8I GTNNAC 3 cut(s) 307, 973, 1020
Hpy99I CGWCG 2 cut(s) 40, 244
HpyAV CCTTC 1 cut(s) 582
HpyCH4III ACNGT 1 cut(s) 476
HpyCH4IV ACGT 1 cut(s) 1030
HpyCH4V TGCA 6 cut(s) 70, 324, 344, 892, 996, 1035
HpyF10VI GCNNNNNNNGC 3 cut(s) 670, 760, 1162
HpyF3I CTNAG 3 cut(s) 123, 977, 1182
HpySE526I ACGT 1 cut(s) 1030
Hsp92II CATG 6 cut(s) 324, 359, 550, 896, 913, 1064
HspAI GCGC 2 cut(s) 117, 662
Ksp22I TGATCA 1 cut(s) 1047
KspAI GTTAAC 1 cut(s) 973
Kzo9I GATC 4 cut(s) 558, 1047, 1102, 1192
LmnI GCTCC 3 cut(s) 669, 678, 872
Lsp1109I GCAGC 5 cut(s) 101, 709, 750, 980, 1143
LweI GCATC 2 cut(s) 57, 889
MaeI CTAG 2 cut(s) 554, 1176
MaeII ACGT 1 cut(s) 1030
MaeIII GTNAC 1 cut(s) 809
MalI GATC 4 cut(s) 560, 1049, 1104, 1194
MbiI CCGCTC 1 cut(s) 527
MboI GATC 4 cut(s) 558, 1047, 1102, 1192
MboII GAAGA 6 cut(s) 56, 198, 249, 755, 1079, 1246
MflI RGATCY 1 cut(s) 558
MhlI GDGCHC 1 cut(s) 320
MluCI AATT 7 cut(s) 60, 107, 212, 401, 538, 899, 1243
MlyI GAGTC 1 cut(s) 1198
MroXI GAANNNNTTC 1 cut(s) 747
MseI TTAA 6 cut(s) 93, 101, 855, 972, 1116, 1246
MslI CAYNNNNRTG 2 cut(s) 474, 1062
MspA1I CMGCKG 2 cut(s) 114, 763
MspCI CTTAAG 1 cut(s) 1115
MspI CCGG 3 cut(s) 293, 708, 876
MspR9I CCNGG 3 cut(s) 414, 708, 877
Mva1269I GAATGC 1 cut(s) 602
MvaI CCWGG 1 cut(s) 414
MwoI GCNNNNNNNGC 3 cut(s) 670, 760, 1162
NciI CCSGG 2 cut(s) 708, 877
NdeII GATC 4 cut(s) 558, 1047, 1102, 1192
NlaIII CATG 6 cut(s) 324, 359, 550, 896, 913, 1064
NlaIV GGNNCC 5 cut(s) 137, 377, 674, 836, 874
NmuCI GTSAC 1 cut(s) 809
NspI RCATGY 1 cut(s) 896
NspV TTCGAA 1 cut(s) 216
OliI CACNNNNGTG 1 cut(s) 474
PagI TCATGA 3 cut(s) 355, 909, 1060
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PctI GAATGC 1 cut(s) 602
PdmI GAANNNNTTC 1 cut(s) 747
PfeI GAWTC 4 cut(s) 218, 254, 932, 1172
PfoI TCCNGGA 1 cut(s) 706
PkrI GCNGC 8 cut(s) 116, 398, 526, 724, 762, 765, 995, 1158
PleI GAGTC 1 cut(s) 1198
PpsI GAGTC 1 cut(s) 1198
PpuMI RGGWCCY 1 cut(s) 135
PshBI ATTAAT 1 cut(s) 101
Psp1406I AACGTT 1 cut(s) 1030
Psp5II RGGWCCY 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 412
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 5 cut(s) 137, 377, 674, 836, 874
PspPI GGNCC 3 cut(s) 135, 295, 939
PspPPI RGGWCCY 1 cut(s) 135
PsuI RGATCY 1 cut(s) 558
PvuII CAGCTG 1 cut(s) 114
RsaI GTAC 1 cut(s) 173
RsaNI GTAC 1 cut(s) 172
RseI CAYNNNNRTG 2 cut(s) 474, 1062
SalI GTCGAC 1 cut(s) 1018
SaqAI TTAA 6 cut(s) 93, 101, 855, 972, 1116, 1246
SatI GCNGC 8 cut(s) 115, 397, 525, 723, 761, 764, 994, 1157
Sau3AI GATC 4 cut(s) 558, 1047, 1102, 1192
Sau96I GGNCC 3 cut(s) 135, 295, 939
SchI GAGTC 1 cut(s) 1198
ScrFI CCNGG 3 cut(s) 414, 708, 877
SduI GDGCHC 1 cut(s) 320
SfaNI GCATC 2 cut(s) 57, 889
SfuI TTCGAA 1 cut(s) 216
SinI GGWCC 2 cut(s) 135, 939
SmiMI CAYNNNNRTG 2 cut(s) 474, 1062
SmlI CTYRAG 1 cut(s) 1115
SmoI CTYRAG 1 cut(s) 1115
Sse9I AATT 7 cut(s) 60, 107, 212, 401, 538, 899, 1243
SsiI CCGC 4 cut(s) 397, 525, 761, 1088
SspI AATATT 1 cut(s) 75
SspMI CTAG 2 cut(s) 554, 1176
StyD4I CCNGG 3 cut(s) 412, 706, 875
TaaI ACNGT 1 cut(s) 476
TaiI ACGT 1 cut(s) 1033
TaqI TCGA 7 cut(s) 78, 216, 425, 848, 1019, 1105, 1195
TasI AATT 7 cut(s) 60, 107, 212, 401, 538, 899, 1243
TauI GCSGC 3 cut(s) 399, 527, 763
TfiI GAWTC 4 cut(s) 218, 254, 932, 1172
Tru1I TTAA 6 cut(s) 93, 101, 855, 972, 1116, 1246
Tru9I TTAA 6 cut(s) 93, 101, 855, 972, 1116, 1246
TscAI CASTG 4 cut(s) 391, 479, 505, 814
TseFI GTSAC 1 cut(s) 809
TseI GCWGC 5 cut(s) 114, 722, 763, 993, 1156
Tsp45I GTSAC 1 cut(s) 809
TspDTI ATGAA 5 cut(s) 344, 551, 555, 1046, 1080
TspRI CASTG 4 cut(s) 391, 479, 505, 814
Vha464I CTTAAG 1 cut(s) 1115
VpaK11BI GGWCC 2 cut(s) 135, 939
VspI ATTAAT 1 cut(s) 101
XapI RAATTY 2 cut(s) 60, 538
XbaI TCTAGA 1 cut(s) 553
XceI RCATGY 1 cut(s) 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 1019
XmnI GAANNNNTTC 1 cut(s) 747
XspI CTAG 2 cut(s) 554, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.