FvH4_1g18391

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Forward (+)
10708030 .. 10709433
1404 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18391.t1

Sequence Viewer

Length: 1188 bp
ATGAGCAAGAGGAGGAAATTAGGAATGACAGAAAATTACCTACCAGAAGACATCATTGTGAAAATCCTCCACAGGGTTCCCCTAAAACCCCTAGTACGATTCAGCACTGTTTCGAAAGGCTGGCATTCCATTATATTTGCCGACCCTCAATTCAAGAAATCCCATACGAAATTTGCTTCTGCGCAGCAAACCCTCAGTCGAAGACTCCTCTATTCCACGGCCTCTCAAGTTGAATCCTTAGTCTTGGAGACGCCGTCGTTTGGAGACACTTCTTCCGTCAGAAAGCTCAGCTGCCCCTTCAATAAACACGGGAATCGTATCAAGCTACTAGGCTCCTGTAATGGCTTGGTATGTGTAGCTCTTGAGTCCACGCGAAACTTGTATATTTGGAACCCAACAAACGGATTCTTCCAAAAGTTACCCGACCCTGGTTTCTCCCAAGAAGATAATATTGTGGTTTACTCTGGTTTAGGGCATTTGTCAGCCACAGACGACTACAAAGTTCTAGTTGCCGCCGGTAGAGCTAGAAGCAGAGATCGGCGCCGCAAACTTTATTTGCGGCGGGACGAGATCAAGGAGGTGAAGATATTCTCATTAAGGTCTAAGTTATGGATTGAACTGATCCCTCCACGCTTGACCCTTGAGCGTCAGGGGACTTTGTGCAATGAGGCACTTCATTGGTTGCATTGCAAAAGTATCGTTGTTTTTGATTTGGCCAAGGAAGAGTTCAGGCTAATGCCGCTGCCTGATTGTCTCATTCCTTTTCATTTTTACATCCGTCTTGGCGTTTCTTCTGGAGGATGCTTGTGTGTGACGTATACCTTCAATTTTGAAAACTCTATTGATTTGTGGGTGATGAGAGAATATGGCGTGCGTGAATCTTGGACTAAGCTCTTTAACTGTAACATTGCCGAACGGCCGCGTGGGACGTATGTCAGTCGACCAATCCTGGTTAAGGAGAGTACACTTTTTGTGTTTATATGGGATTGGGGGAACTGGGATAACAGGTTGGTCTTGAAGATCGATCATGAACAAGGGATAGTAGGCCAATATATGTTGCCTAAGGTTGACATGATTGAAAGGAGAATTGTGCCTAATATGATCCAATATATGATTGGATACGAAGAGAGTTCAGTTTGGCTTAGTGATTACCATGCATGTAGTGCACGAGAAGAAGAAGGTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

396

Amino Acids

45.8

Weight (kDa)

9.19

Isoelectric Point (pI)

47.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 13 - 48 3e-06 F-box-like
F-box PF00646 14 - 45 4.7e-08 F-box domain
FBA_3 PF08268 76 - 297 3.9e-15 F-box associated beta propeller domain
FBA_1 PF07734 96 - 357 6.6e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 540
AccI GTMKAC 2 cut(s) 818, 940
AccII CGCG 2 cut(s) 373, 922
AciI CCGC 6 cut(s) 513, 544, 559, 562, 740, 920
AclWI GGATC 2 cut(s) 616, 1096
AcoI YGGCCR 2 cut(s) 714, 917
AcsI RAATTY 1 cut(s) 170
AcyI GRCGYC 2 cut(s) 251, 541
AfaI GTAC 2 cut(s) 96, 964
AfiI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 955
AgsI TTSAA 8 cut(s) 154, 233, 301, 617, 826, 833, 1018, 1079
AjnI CCWGG 2 cut(s) 427, 948
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
AluBI AGCT 6 cut(s) 286, 291, 325, 359, 524, 892
AluI AGCT 6 cut(s) 286, 291, 325, 359, 524, 892
Alw21I GWGCWC 1 cut(s) 1168
Alw26I GTCTC 3 cut(s) 242, 258, 758
Alw44I GTGCAC 1 cut(s) 1164
AlwI GGATC 2 cut(s) 616, 1096
AoxI GGCC 4 cut(s) 219, 714, 917, 1045
ApaLI GTGCAC 1 cut(s) 1164
ApeKI GCWGC 3 cut(s) 184, 291, 742
ApoI RAATTY 1 cut(s) 170
ArsI GACNNNNNNTTYG 2 cut(s) 181, 213
Asp700I GAANNNNTTC 1 cut(s) 587
AspLEI GCGC 2 cut(s) 184, 543
AsuHPI GGTGA 2 cut(s) 592, 865
AsuII TTCGAA 1 cut(s) 113
AxyI CCTNAGG 1 cut(s) 1062
BaeGI GKGCMC 1 cut(s) 1168
BalI TGGCCA 1 cut(s) 716
BanI GGYRCC 1 cut(s) 540
BauI CACGAG 1 cut(s) 1167
BbsI GAAGAC 2 cut(s) 54, 208
Bbv12I GWGCWC 1 cut(s) 1168
BbvI GCAGC 3 cut(s) 196, 278, 729
BceAI ACGGC 3 cut(s) 234, 238, 932
BcgI CGANNNNNNTGC 2 cut(s) 679, 713
BciT130I CCWGG 2 cut(s) 429, 950
BciVI GTATCC 1 cut(s) 1112
BcoDI GTCTC 3 cut(s) 242, 258, 758
BfaI CTAG 4 cut(s) 92, 329, 506, 525
BfoI RGCGCY 1 cut(s) 544
BfuI GTATCC 1 cut(s) 1112
BisI GCNGC 8 cut(s) 185, 292, 513, 544, 560, 740, 743, 920
BlpI GCTNAGC 1 cut(s) 287
BlsI GCNGC 8 cut(s) 186, 293, 514, 545, 561, 741, 744, 921
Bme1390I CCNGG 2 cut(s) 429, 950
BmiI GGNNCC 4 cut(s) 78, 334, 392, 542
BmrFI CCNGG 2 cut(s) 429, 950
BmrI ACTGGG 1 cut(s) 1006
BmsI GCATC 1 cut(s) 791
BmuI ACTGGG 1 cut(s) 1006
BoxI GACNNNNGTC 1 cut(s) 932
BpiI GAAGAC 2 cut(s) 54, 208
BpmI CTGGAG 1 cut(s) 816
Bpu1102I GCTNAGC 1 cut(s) 287
Bpu14I TTCGAA 1 cut(s) 113
BpuEI CTTGAG 3 cut(s) 210, 383, 662
Bsa29I ATCGAT 1 cut(s) 1023
BsaHI GRCGYC 2 cut(s) 251, 541
BsaJI CCNNGG 3 cut(s) 216, 427, 717
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 955
Bse118I RCCGGY 1 cut(s) 515
Bse1I ACTGG 1 cut(s) 1001
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 3 cut(s) 670, 685, 906
BseBI CCWGG 2 cut(s) 429, 950
BseCI ATCGAT 1 cut(s) 1023
BseDI CCNNGG 3 cut(s) 216, 427, 717
BseGI GGATG 2 cut(s) 774, 806
BseLI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 955
BseMI GCAATG 3 cut(s) 670, 685, 906
BseMII CTCAG 2 cut(s) 208, 301
BseNI ACTGG 1 cut(s) 1001
BseRI GAGGAG 2 cut(s) 25, 197
BseSI GKGCMC 1 cut(s) 1168
BseX3I CGGCCG 1 cut(s) 917
BseXI GCAGC 3 cut(s) 196, 278, 729
Bsh1236I CGCG 2 cut(s) 373, 922
Bsh1285I CGRYCG 1 cut(s) 920
BshFI GGCC 4 cut(s) 221, 716, 919, 1047
BshNI GGYRCC 1 cut(s) 540
BshVI ATCGAT 1 cut(s) 1023
BsiEI CGRYCG 1 cut(s) 920
BsiHKAI GWGCWC 1 cut(s) 1168
BsiSI CCGG 1 cut(s) 516
BslFI GGGAC 3 cut(s) 578, 667, 940
BslI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 955
BsmAI GTCTC 3 cut(s) 242, 258, 758
BsmBI CGTCTC 1 cut(s) 242
BsmFI GGGAC 3 cut(s) 578, 667, 940
BsmI GAATGC 1 cut(s) 124
BsnI GGCC 4 cut(s) 221, 716, 919, 1047
Bsp119I TTCGAA 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 1168
Bsp143I GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
Bsp1720I GCTNAGC 1 cut(s) 287
BspACI CCGC 6 cut(s) 513, 544, 559, 562, 740, 920
BspANI GGCC 4 cut(s) 221, 716, 919, 1047
BspCNI CTCAG 2 cut(s) 207, 300
BspDI ATCGAT 1 cut(s) 1023
BspFNI CGCG 2 cut(s) 373, 922
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 4 cut(s) 78, 334, 392, 542
BspPI GGATC 2 cut(s) 616, 1096
BspT104I TTCGAA 1 cut(s) 113
BspT107I GGYRCC 1 cut(s) 540
BsrDI GCAATG 3 cut(s) 670, 685, 906
BsrFI RCCGGY 1 cut(s) 515
BsrI ACTGG 1 cut(s) 1001
BssAI RCCGGY 1 cut(s) 515
BssECI CCNNGG 3 cut(s) 216, 427, 717
BssMI GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
BssNAI GTATAC 1 cut(s) 819
BssNI GRCGYC 2 cut(s) 251, 541
BssSI CACGAG 1 cut(s) 1167
BssT1I CCWWGG 1 cut(s) 717
Bst1107I GTATAC 1 cut(s) 819
Bst2BI CACGAG 1 cut(s) 1167
Bst2UI CCWGG 2 cut(s) 429, 950
Bst4CI ACNGT 2 cut(s) 109, 902
Bst6I CTCTTC 2 cut(s) 717, 1119
BstACI GRCGYC 2 cut(s) 251, 541
BstAPI GCANNNNNTGC 1 cut(s) 1163
BstBI TTCGAA 1 cut(s) 113
BstC8I GCNNGC 2 cut(s) 122, 872
BstDEI CTNAG 7 cut(s) 194, 238, 287, 603, 888, 1062, 1142
BstDSI CCRYGG 1 cut(s) 216
BstENI CCTNNNNNAGG 1 cut(s) 953
BstF5I GGATG 2 cut(s) 774, 806
BstFNI CGCG 2 cut(s) 373, 922
BstH2I RGCGCY 1 cut(s) 544
BstHHI GCGC 2 cut(s) 184, 543
BstKTI GATC 6 cut(s) 538, 573, 624, 1023, 1027, 1104
BstMAI GTCTC 3 cut(s) 242, 258, 758
BstMBI GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
BstMCI CGRYCG 1 cut(s) 920
BstMWI GCNNNNNNNGC 3 cut(s) 521, 739, 1163
BstNI CCWGG 2 cut(s) 429, 950
BstNSI RCATGY 1 cut(s) 1161
BstPAI GACNNNNGTC 1 cut(s) 932
BstSCI CCNGG 2 cut(s) 427, 948
BstSLI GKGCMC 1 cut(s) 1168
BstUI CGCG 2 cut(s) 373, 922
BstV1I GCAGC 3 cut(s) 196, 278, 729
BstV2I GAAGAC 2 cut(s) 54, 208
BstZ17I GTATAC 1 cut(s) 819
BstZI CGGCCG 1 cut(s) 917
Bsu15I ATCGAT 1 cut(s) 1023
Bsu36I CCTNAGG 1 cut(s) 1062
BsuI GTATCC 1 cut(s) 1112
BsuRI GGCC 4 cut(s) 221, 716, 919, 1047
BsuTUI ATCGAT 1 cut(s) 1023
BtgI CCRYGG 1 cut(s) 216
BtsCI GGATG 2 cut(s) 774, 806
BtsIMutI CAGTG 1 cut(s) 105
Cac8I GCNNGC 2 cut(s) 122, 872
CciI TCATGA 1 cut(s) 1027
CfoI GCGC 2 cut(s) 184, 543
Cfr10I RCCGGY 1 cut(s) 515
ClaI ATCGAT 1 cut(s) 1023
CseI GACGC 2 cut(s) 259, 635
Csp6I GTAC 2 cut(s) 95, 963
CviAII CATG 4 cut(s) 1028, 1072, 1154, 1158
CviQI GTAC 2 cut(s) 95, 963
DdeI CTNAG 7 cut(s) 194, 238, 287, 603, 888, 1062, 1142
DinI GGCGCC 1 cut(s) 542
DpnI GATC 6 cut(s) 537, 572, 623, 1022, 1026, 1103
DpnII GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
EaeI YGGCCR 2 cut(s) 714, 917
EagI CGGCCG 1 cut(s) 917
Eam1104I CTCTTC 2 cut(s) 717, 1119
EarI CTCTTC 2 cut(s) 717, 1119
EclXI CGGCCG 1 cut(s) 917
Eco130I CCWWGG 1 cut(s) 717
Eco52I CGGCCG 1 cut(s) 917
Eco81I CCTNAGG 1 cut(s) 1062
EcoNI CCTNNNNNAGG 1 cut(s) 953
EcoRII CCWGG 2 cut(s) 427, 948
EcoT14I CCWWGG 1 cut(s) 717
EcoT22I ATGCAT 1 cut(s) 1159
EgeI GGCGCC 1 cut(s) 542
EheI GGCGCC 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 717
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 4 cut(s) 1031, 1075, 1157, 1161
FaqI GGGAC 3 cut(s) 578, 667, 940
FatI CATG 4 cut(s) 1027, 1071, 1153, 1157
FauI CCCGC 1 cut(s) 555
FblI GTMKAC 2 cut(s) 818, 940
Fnu4HI GCNGC 8 cut(s) 185, 292, 513, 544, 560, 740, 743, 920
FokI GGATG 2 cut(s) 761, 813
Fsp4HI GCNGC 8 cut(s) 185, 292, 513, 544, 560, 740, 743, 920
FspBI CTAG 4 cut(s) 92, 329, 506, 525
FspI TGCGCA 1 cut(s) 183
GlaI GCGC 2 cut(s) 183, 542
GluI GCNGC 8 cut(s) 185, 292, 513, 544, 560, 740, 743, 920
GsuI CTGGAG 1 cut(s) 816
HaeII RGCGCY 1 cut(s) 544
HaeIII GGCC 4 cut(s) 221, 716, 919, 1047
HapII CCGG 1 cut(s) 516
HgaI GACGC 2 cut(s) 259, 635
HhaI GCGC 2 cut(s) 184, 543
Hin1I GRCGYC 2 cut(s) 251, 541
Hin1II CATG 4 cut(s) 1031, 1075, 1157, 1161
Hin6I GCGC 2 cut(s) 182, 541
HinP1I GCGC 2 cut(s) 182, 541
HincII GTYRAC 2 cut(s) 941, 1069
HindII GTYRAC 2 cut(s) 941, 1069
HinfI GANTC 7 cut(s) 99, 204, 233, 313, 365, 405, 878
HpaII CCGG 1 cut(s) 516
HphI GGTGA 2 cut(s) 592, 865
Hpy166II GTNNAC 7 cut(s) 369, 460, 819, 941, 965, 1069, 1166
Hpy188I TCNGA 1 cut(s) 281
Hpy188III TCNNGA 5 cut(s) 154, 362, 795, 1015, 1028
Hpy8I GTNNAC 7 cut(s) 369, 460, 819, 941, 965, 1069, 1166
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 3 cut(s) 307, 832, 1172
HpyCH4III ACNGT 2 cut(s) 109, 902
HpyCH4IV ACGT 2 cut(s) 815, 929
HpyCH4V TGCA 5 cut(s) 663, 685, 690, 1157, 1166
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 739, 1163
HpyF3I CTNAG 7 cut(s) 194, 238, 287, 603, 888, 1062, 1142
HpySE526I ACGT 2 cut(s) 815, 929
Hsp92I GRCGYC 2 cut(s) 251, 541
Hsp92II CATG 4 cut(s) 1031, 1075, 1157, 1161
HspAI GCGC 2 cut(s) 182, 541
KasI GGCGCC 1 cut(s) 540
Kzo9I GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
LmnI GCTCC 1 cut(s) 338
Lsp1109I GCAGC 3 cut(s) 196, 278, 729
LweI GCATC 1 cut(s) 791
MaeI CTAG 4 cut(s) 92, 329, 506, 525
MaeII ACGT 2 cut(s) 815, 929
MaeIII GTNAC 3 cut(s) 417, 811, 902
MalI GATC 6 cut(s) 537, 572, 623, 1022, 1026, 1103
MboI GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
MhlI GDGCHC 1 cut(s) 1168
MlsI TGGCCA 1 cut(s) 716
MluCI AATT 6 cut(s) 17, 34, 149, 170, 826, 1086
MluNI TGGCCA 1 cut(s) 716
Mly113I GGCGCC 1 cut(s) 541
MlyI GAGTC 2 cut(s) 198, 374
Mox20I TGGCCA 1 cut(s) 716
Mph1103I ATGCAT 1 cut(s) 1159
MroXI GAANNNNTTC 1 cut(s) 587
MscI TGGCCA 1 cut(s) 716
MseI TTAA 3 cut(s) 596, 897, 954
MslI CAYNNNNRTG 1 cut(s) 56
Msp20I TGGCCA 1 cut(s) 716
MspA1I CMGCKG 2 cut(s) 291, 742
MspI CCGG 1 cut(s) 516
MspR9I CCNGG 2 cut(s) 429, 950
Mva1269I GAATGC 1 cut(s) 124
MvaI CCWGG 2 cut(s) 429, 950
MvnI CGCG 2 cut(s) 373, 922
MwoI GCNNNNNNNGC 3 cut(s) 521, 739, 1163
NarI GGCGCC 1 cut(s) 541
NdeII GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
NlaIII CATG 4 cut(s) 1031, 1075, 1157, 1161
NlaIV GGNNCC 4 cut(s) 78, 334, 392, 542
NmuCI GTSAC 1 cut(s) 811
NsbI TGCGCA 1 cut(s) 183
NsiI ATGCAT 1 cut(s) 1159
NspI RCATGY 1 cut(s) 1161
NspV TTCGAA 1 cut(s) 113
PagI TCATGA 1 cut(s) 1027
PctI GAATGC 1 cut(s) 124
PdmI GAANNNNTTC 1 cut(s) 587
PfeI GAWTC 5 cut(s) 99, 233, 313, 405, 878
PflFI GACNNNGTC 1 cut(s) 253
PkrI GCNGC 8 cut(s) 186, 293, 514, 545, 561, 741, 744, 921
PleI GAGTC 2 cut(s) 198, 373
PluTI GGCGCC 1 cut(s) 544
PpsI GAGTC 2 cut(s) 198, 373
PshAI GACNNNNGTC 1 cut(s) 932
Psp6I CCWGG 2 cut(s) 427, 948
PspGI CCWGG 2 cut(s) 427, 948
PspN4I GGNNCC 4 cut(s) 78, 334, 392, 542
PsyI GACNNNGTC 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 291
RsaI GTAC 2 cut(s) 96, 964
RsaNI GTAC 2 cut(s) 95, 963
RseI CAYNNNNRTG 1 cut(s) 56
SalI GTCGAC 1 cut(s) 939
SaqAI TTAA 3 cut(s) 596, 897, 954
SatI GCNGC 8 cut(s) 185, 292, 513, 544, 560, 740, 743, 920
Sau3AI GATC 6 cut(s) 535, 570, 621, 1020, 1024, 1101
SchI GAGTC 2 cut(s) 198, 374
ScrFI CCNGG 2 cut(s) 429, 950
SduI GDGCHC 1 cut(s) 1168
SfaNI GCATC 1 cut(s) 791
SfoI GGCGCC 1 cut(s) 542
SfuI TTCGAA 1 cut(s) 113
SmiMI CAYNNNNRTG 1 cut(s) 56
SmlI CTYRAG 3 cut(s) 225, 362, 641
SmoI CTYRAG 3 cut(s) 225, 362, 641
Sse9I AATT 6 cut(s) 17, 34, 149, 170, 826, 1086
SsiI CCGC 6 cut(s) 513, 544, 559, 562, 740, 920
SspDI GGCGCC 1 cut(s) 540
SspI AATATT 1 cut(s) 451
SspMI CTAG 4 cut(s) 92, 329, 506, 525
StyD4I CCNGG 2 cut(s) 427, 948
StyI CCWWGG 1 cut(s) 717
TaaI ACNGT 2 cut(s) 109, 902
TaiI ACGT 2 cut(s) 818, 932
TaqI TCGA 4 cut(s) 113, 199, 940, 1023
TasI AATT 6 cut(s) 17, 34, 149, 170, 826, 1086
TatI WGTACW 1 cut(s) 962
TauI GCSGC 5 cut(s) 515, 546, 562, 742, 922
TfiI GAWTC 5 cut(s) 99, 233, 313, 405, 878
Tru1I TTAA 3 cut(s) 596, 897, 954
Tru9I TTAA 3 cut(s) 596, 897, 954
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 1 cut(s) 811
TseI GCWGC 3 cut(s) 184, 291, 742
Tsp45I GTSAC 1 cut(s) 811
TspDTI ATGAA 3 cut(s) 665, 755, 1044
TspGWI ACGGA 3 cut(s) 265, 417, 767
TspRI CASTG 1 cut(s) 112
Tth111I GACNNNGTC 1 cut(s) 253
VneI GTGCAC 1 cut(s) 1164
XagI CCTNNNNNAGG 1 cut(s) 953
XapI RAATTY 1 cut(s) 170
XceI RCATGY 1 cut(s) 1161
XcmI CCANNNNNNNNNTGG 1 cut(s) 1112
XmiI GTMKAC 2 cut(s) 818, 940
XmnI GAANNNNTTC 1 cut(s) 587
XspI CTAG 4 cut(s) 92, 329, 506, 525
Zsp2I ATGCAT 1 cut(s) 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.