A Receptor for Ubiquitination Targets
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 60 - 115 | 8e-08 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 204 |
| AccIII | TCCGGA | 1 cut(s) | 271 |
| AciI | CCGC | 2 cut(s) | 128, 338 |
| AgsI | TTSAA | 2 cut(s) | 177, 259 |
| AjnI | CCWGG | 1 cut(s) | 19 |
| AluBI | AGCT | 2 cut(s) | 8, 133 |
| AluI | AGCT | 2 cut(s) | 8, 133 |
| Alw26I | GTCTC | 1 cut(s) | 212 |
| Aor13HI | TCCGGA | 1 cut(s) | 271 |
| AoxI | GGCC | 1 cut(s) | 339 |
| AsuHPI | GGTGA | 1 cut(s) | 196 |
| BbsI | GAAGAC | 1 cut(s) | 245 |
| BccI | CCATC | 1 cut(s) | 23 |
| BciT130I | CCWGG | 1 cut(s) | 21 |
| BcoDI | GTCTC | 1 cut(s) | 212 |
| BisI | GCNGC | 1 cut(s) | 339 |
| BlpI | GCTNAGC | 1 cut(s) | 134 |
| BlsI | GCNGC | 1 cut(s) | 340 |
| Bme1390I | CCNGG | 1 cut(s) | 21 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BmrFI | CCNGG | 1 cut(s) | 21 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 1 cut(s) | 245 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 134 |
| BsaWI | WCCGGW | 1 cut(s) | 271 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 30 |
| BseAI | TCCGGA | 1 cut(s) | 271 |
| BseBI | CCWGG | 1 cut(s) | 21 |
| BseGI | GGATG | 3 cut(s) | 34, 39, 280 |
| BseNI | ACTGG | 1 cut(s) | 30 |
| BshFI | GGCC | 1 cut(s) | 341 |
| BsiSI | CCGG | 1 cut(s) | 272 |
| BsmAI | GTCTC | 1 cut(s) | 212 |
| BsnI | GGCC | 1 cut(s) | 341 |
| Bsp13I | TCCGGA | 1 cut(s) | 271 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 134 |
| BspACI | CCGC | 2 cut(s) | 128, 338 |
| BspANI | GGCC | 1 cut(s) | 341 |
| BspEI | TCCGGA | 1 cut(s) | 271 |
| BspHI | TCATGA | 1 cut(s) | 322 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BsrI | ACTGG | 1 cut(s) | 30 |
| Bst2UI | CCWGG | 1 cut(s) | 21 |
| Bst6I | CTCTTC | 1 cut(s) | 359 |
| BstDEI | CTNAG | 1 cut(s) | 134 |
| BstF5I | GGATG | 3 cut(s) | 34, 39, 280 |
| BstMAI | GTCTC | 1 cut(s) | 212 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstNI | CCWGG | 1 cut(s) | 21 |
| BstSCI | CCNGG | 1 cut(s) | 19 |
| BstV2I | GAAGAC | 1 cut(s) | 245 |
| BsuRI | GGCC | 1 cut(s) | 341 |
| BtsCI | GGATG | 3 cut(s) | 34, 39, 280 |
| CciI | TCATGA | 1 cut(s) | 322 |
| CviAII | CATG | 1 cut(s) | 323 |
| CviJI | RGCY | 6 cut(s) | 8, 17, 133, 138, 248, 341 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 17, 133, 138, 248, 341 |
| DdeI | CTNAG | 1 cut(s) | 134 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 204 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 204 |
| Eam1104I | CTCTTC | 1 cut(s) | 359 |
| EarI | CTCTTC | 1 cut(s) | 359 |
| EcoRII | CCWGG | 1 cut(s) | 19 |
| FaeI | CATG | 1 cut(s) | 326 |
| FaiI | YATR | 4 cut(s) | 225, 305, 324, 357 |
| FatI | CATG | 1 cut(s) | 322 |
| Fnu4HI | GCNGC | 1 cut(s) | 339 |
| FokI | GGATG | 3 cut(s) | 41, 46, 287 |
| Fsp4HI | GCNGC | 1 cut(s) | 339 |
| GluI | GCNGC | 1 cut(s) | 339 |
| HaeIII | GGCC | 1 cut(s) | 341 |
| HapII | CCGG | 1 cut(s) | 272 |
| Hin1II | CATG | 1 cut(s) | 326 |
| HpaII | CCGG | 1 cut(s) | 272 |
| HphI | GGTGA | 1 cut(s) | 196 |
| Hpy188I | TCNGA | 4 cut(s) | 54, 79, 286, 363 |
| Hpy188III | TCNNGA | 2 cut(s) | 272, 323 |
| HpyAV | CCTTC | 1 cut(s) | 175 |
| HpyCH4V | TGCA | 2 cut(s) | 152, 170 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 1 cut(s) | 134 |
| Hsp92II | CATG | 1 cut(s) | 326 |
| Kpn2I | TCCGGA | 1 cut(s) | 271 |
| LmnI | GCTCC | 3 cut(s) | 5, 22, 130 |
| LpnPI | CCDG | 5 cut(s) | 6, 11, 33, 285, 305 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeIII | GTNAC | 1 cut(s) | 184 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MluCI | AATT | 2 cut(s) | 147, 351 |
| MnlI | CCTC | 3 cut(s) | 73, 340, 360 |
| MroI | TCCGGA | 1 cut(s) | 271 |
| MseI | TTAA | 2 cut(s) | 146, 155 |
| MslI | CAYNNNNRTG | 1 cut(s) | 327 |
| MspI | CCGG | 1 cut(s) | 272 |
| MspR9I | CCNGG | 1 cut(s) | 21 |
| MvaI | CCWGG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NlaIII | CATG | 1 cut(s) | 326 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| NmuCI | GTSAC | 1 cut(s) | 184 |
| PagI | TCATGA | 1 cut(s) | 322 |
| PfoI | TCCNGGA | 1 cut(s) | 19 |
| PkrI | GCNGC | 1 cut(s) | 340 |
| Psp6I | CCWGG | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| RseI | CAYNNNNRTG | 1 cut(s) | 327 |
| SaqAI | TTAA | 2 cut(s) | 146, 155 |
| SatI | GCNGC | 1 cut(s) | 339 |
| ScrFI | CCNGG | 1 cut(s) | 21 |
| SetI | ASST | 8 cut(s) | 10, 84, 121, 135, 186, 317, 351, 371 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SgeI | CNNG | 9 cut(s) | 32, 33, 38, 102, 128, 183, 284, 304, 335 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 327 |
| Sse9I | AATT | 2 cut(s) | 147, 351 |
| SsiI | CCGC | 2 cut(s) | 128, 338 |
| StyD4I | CCNGG | 1 cut(s) | 19 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TaqII | GACCGA | 1 cut(s) | 214 |
| TasI | AATT | 2 cut(s) | 147, 351 |
| TauI | GCSGC | 1 cut(s) | 341 |
| Tru1I | TTAA | 2 cut(s) | 146, 155 |
| Tru9I | TTAA | 2 cut(s) | 146, 155 |
| TseFI | GTSAC | 1 cut(s) | 184 |
| Tsp45I | GTSAC | 1 cut(s) | 184 |
| TspDTI | ATGAA | 3 cut(s) | 292, 311, 344 |
| TspGWI | ACGGA | 1 cut(s) | 203 |