Rmu_sc0008992.1_g000002

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008992.1
OG0000082
Physical Location & Seq
Forward (+)
18512 .. 21464
2953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008992.1_g000002.1.cds

Sequence Viewer

Length: 1449 bp
atggcaacaatgaacgaacacctccccgaagaaatcacaacacaaatcctttataggttacccccgaaactagtaatccgtttcagctgcacttcaaagagatggaggtcaattgtctcaaatccccaattcgccaaatcgcatttcaaattcgcttctgagaggagaaccctcagtcacagactcctgctctccacgccctctcatatggaatccttagacttgcaaacaccgtcgtttgtggacgactcttgtatcagaaagctcatctgcccattcaagcaaccagggcgccccgtcttcacactcggttcctgcaacgacgattacaaagttgttgtagctgctccatctgaggtgaatccagccatgcctatacatgtgttctcgtctaaatccacctcttggaaaaggtttgaatcccctccccacttctccttgatgcgttggttcgatacaattaggggcagtctcactaatgaggcactacattggctcgacgaattgcgtgagccggagctagacacttccagatacaccatcactgcttttgatttagacagagaagaatttcgggaaatgccgcttcccatttcgggtgagacactttcagaattatcgtttttaagaggcgtaggggttgtttttggagggtgcttgtgcgtatctagttttgatggtgagtattttcaattatgggcgatggtggaatatgatgttggtgaatcttggaccaagctgtttaagtttaagaatgcggggattcatcttgtgctacctgtcttctacacggaaacaagggttgttatgtggggatgcagattttgggatggggaggtggacgacctcttgataaggtttgatcataacgaagaagagaagcttgacagggctgcggtttgtagtgcgatatattggcttggtcgaaacggtcatattgggattggacgatctagaacatcccatcttcgagctctctcgacccgagagagagacccgacaacccgtgagaagggtccgaccaaaacgcagtcctccggccatctctcggcggcggaccaccgacgatcgctcccactccttggcgacgacgtcctcctagcgacggatcatccaatcggcgacggagggggacgatataaggcccgaaagcttgaaactttttttcggcaattatggacattttccggtgactccagtggcgatttggcttgcatggcatatgaaagttggtttactcctcgtgctctacgtggtagtgcagttctgactttatttttcaatgttagaggaagactagacggtggaagcactcgcctgacagacgtgaggaattgtcctggtggtgaagaaaagggaaggagttttcccgatgtcgtgtttttagtcaagggattaactcaccgatttggagattctgctttcaatcgaaatcgatatcaaggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

482

Amino Acids

54.86

Weight (kDa)

8.28

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1095
AccB1I GGYRCC 1 cut(s) 291
AccB7I CCANNNNNTGG 2 cut(s) 405, 1082
AciI CCGC 5 cut(s) 584, 758, 896, 1052, 1055
AclWI GGATC 1 cut(s) 1116
AcoI YGGCCR 1 cut(s) 1039
AcsI RAATTY 2 cut(s) 149, 569
AcyI GRCGYC 2 cut(s) 292, 1092
AfiI CCNNNNNNNGG 6 cut(s) 405, 596, 1012, 1048, 1082, 1105
AflIII ACRYGT 1 cut(s) 379
AgsI TTSAA 8 cut(s) 96, 148, 280, 419, 692, 1157, 1282, 1426
AhlI ACTAGT 1 cut(s) 70
AjiI CACGTC 1 cut(s) 1327
AjnI CCWGG 2 cut(s) 286, 1339
AjuI GAANNNNNNNTTGG 4 cut(s) 128, 160, 702, 734
AluBI AGCT 8 cut(s) 87, 265, 344, 520, 739, 883, 974, 1153
AluI AGCT 8 cut(s) 87, 265, 344, 520, 739, 883, 974, 1153
Alw21I GWGCWC 2 cut(s) 976, 1249
Alw26I GTCTC 4 cut(s) 121, 476, 596, 987
AlwI GGATC 1 cut(s) 1116
Ama87I CYCGRG 1 cut(s) 984
AoxI GGCC 2 cut(s) 1039, 1143
ApeKI GCWGC 3 cut(s) 87, 344, 893
ApoI RAATTY 2 cut(s) 149, 569
Asp700I GAANNNNTTC 1 cut(s) 570
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 4 cut(s) 732, 1016, 1057, 1144
AsuHPI GGTGA 7 cut(s) 370, 611, 692, 734, 1202, 1358, 1394
AvaI CYCGRG 1 cut(s) 984
AvaII GGWCC 3 cut(s) 732, 1016, 1057
BaeI ACNNNNGTAYC 2 cut(s) 238, 271
BanI GGYRCC 1 cut(s) 291
BanII GRGCYC 1 cut(s) 976
BauI CACGAG 1 cut(s) 1242
BbsI GAAGAC 3 cut(s) 292, 775, 1300
Bbv12I GWGCWC 2 cut(s) 976, 1249
BbvI GCAGC 3 cut(s) 74, 331, 880
BccI CCATC 8 cut(s) 96, 358, 548, 671, 697, 824, 972, 1050
BciT130I CCWGG 2 cut(s) 288, 1341
BclI TGATCA 1 cut(s) 862
BcoDI GTCTC 4 cut(s) 121, 476, 596, 987
BcuI ACTAGT 1 cut(s) 70
BfaI CTAG 6 cut(s) 71, 521, 669, 954, 1100, 1298
BfoI RGCGCY 1 cut(s) 295
BisI GCNGC 5 cut(s) 88, 345, 584, 894, 1053
BlsI GCNGC 5 cut(s) 89, 346, 585, 895, 1054
Bme1390I CCNGG 2 cut(s) 288, 1341
Bme18I GGWCC 3 cut(s) 732, 1016, 1057
BmeT110I CYCGRG 1 cut(s) 984
BmgBI CACGTC 1 cut(s) 1327
BmgT120I GGNCC 4 cut(s) 732, 1016, 1057, 1144
BmiI GGNNCC 3 cut(s) 293, 313, 1017
BmrFI CCNGG 2 cut(s) 288, 1341
BmsI GCATC 2 cut(s) 432, 806
BpiI GAAGAC 3 cut(s) 292, 775, 1300
BpmI CTGGAG 1 cut(s) 1180
Bsa29I ATCGAT 1 cut(s) 1435
BsaAI YACGTR 1 cut(s) 1253
BsaHI GRCGYC 2 cut(s) 292, 1092
BsaI GGTCTC 1 cut(s) 987
BsaJI CCNNGG 2 cut(s) 287, 1081
BsaWI WCCGGW 1 cut(s) 1187
BsaXI ACNNNNNCTCC 2 cut(s) 1056, 1086
Bsc4I CCNNNNNNNGG 6 cut(s) 405, 596, 1012, 1048, 1082, 1105
Bse1I ACTGG 1 cut(s) 1197
BseBI CCWGG 2 cut(s) 288, 1341
BseCI ATCGAT 1 cut(s) 1435
BseDI CCNNGG 2 cut(s) 287, 1081
BseGI GGATG 4 cut(s) 821, 835, 959, 1111
BseLI CCNNNNNNNGG 6 cut(s) 405, 596, 1012, 1048, 1082, 1105
BseMII CTCAG 3 cut(s) 150, 187, 345
BseNI ACTGG 1 cut(s) 1197
BseRI GAGGAG 2 cut(s) 178, 1230
BseXI GCAGC 3 cut(s) 74, 331, 880
BsgI GTGCAG 2 cut(s) 73, 1281
Bsh1285I CGRYCG 1 cut(s) 1070
BshFI GGCC 2 cut(s) 1041, 1145
BshNI GGYRCC 1 cut(s) 291
BshVI ATCGAT 1 cut(s) 1435
BsiEI CGRYCG 1 cut(s) 1070
BsiHKAI GWGCWC 2 cut(s) 976, 1249
BsiHKCI CYCGRG 1 cut(s) 984
BsiSI CCGG 3 cut(s) 515, 1038, 1188
BslFI GGGAC 1 cut(s) 1146
BslI CCNNNNNNNGG 6 cut(s) 405, 596, 1012, 1048, 1082, 1105
BsmAI GTCTC 4 cut(s) 121, 476, 596, 987
BsmFI GGGAC 1 cut(s) 1146
BsmI GAATGC 1 cut(s) 760
BsnI GGCC 2 cut(s) 1041, 1145
Bso31I GGTCTC 1 cut(s) 987
BsoBI CYCGRG 1 cut(s) 984
Bsp1286I GDGCHC 2 cut(s) 976, 1249
Bsp143I GATC 4 cut(s) 862, 950, 1067, 1108
BspACI CCGC 5 cut(s) 584, 758, 896, 1052, 1055
BspANI GGCC 2 cut(s) 1041, 1145
BspCNI CTCAG 3 cut(s) 151, 186, 346
BspDI ATCGAT 1 cut(s) 1435
BspLI GGNNCC 3 cut(s) 293, 313, 1017
BspPI GGATC 1 cut(s) 1116
BspT107I GGYRCC 1 cut(s) 291
BspTNI GGTCTC 1 cut(s) 987
BsrI ACTGG 1 cut(s) 1197
BssECI CCNNGG 2 cut(s) 287, 1081
BssMI GATC 4 cut(s) 862, 950, 1067, 1108
BssNI GRCGYC 2 cut(s) 292, 1092
BssSI CACGAG 1 cut(s) 1242
BssT1I CCWWGG 1 cut(s) 1081
Bst2BI CACGAG 1 cut(s) 1242
Bst2UI CCWGG 2 cut(s) 288, 1341
Bst4CI ACNGT 3 cut(s) 234, 932, 1304
Bst6I CTCTTC 1 cut(s) 870
BstACI GRCGYC 2 cut(s) 292, 1092
BstBAI YACGTR 1 cut(s) 1253
BstC8I GCNNGC 1 cut(s) 1213
BstDEI CTNAG 4 cut(s) 159, 173, 217, 354
BstEII GGTNACC 1 cut(s) 57
BstF5I GGATG 4 cut(s) 821, 835, 959, 1111
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 4 cut(s) 865, 953, 1070, 1111
BstMAI GTCTC 4 cut(s) 121, 476, 596, 987
BstMBI GATC 4 cut(s) 862, 950, 1067, 1108
BstMCI CGRYCG 1 cut(s) 1070
BstMWI GCNNNNNNNGC 3 cut(s) 196, 289, 1217
BstNI CCWGG 2 cut(s) 288, 1341
BstNSI RCATGY 1 cut(s) 383
BstPI GGTNACC 1 cut(s) 57
BstSCI CCNGG 2 cut(s) 286, 1339
BstV1I GCAGC 3 cut(s) 74, 331, 880
BstV2I GAAGAC 3 cut(s) 292, 775, 1300
Bsu15I ATCGAT 1 cut(s) 1435
BsuRI GGCC 2 cut(s) 1041, 1145
BsuTUI ATCGAT 1 cut(s) 1435
BtgZI GCGATG 1 cut(s) 716
BtrI CACGTC 1 cut(s) 1327
BtsCI GGATG 4 cut(s) 821, 835, 959, 1111
BtsI GCAGTG 1 cut(s) 543
BtsIMutI CAGTG 2 cut(s) 543, 1204
Cac8I GCNNGC 1 cut(s) 1213
CfoI GCGC 1 cut(s) 294
Cfr13I GGNCC 4 cut(s) 732, 1016, 1057, 1144
ClaI ATCGAT 1 cut(s) 1435
CviAII CATG 3 cut(s) 370, 380, 1216
DdeI CTNAG 4 cut(s) 159, 173, 217, 354
DinI GGCGCC 1 cut(s) 293
DpnI GATC 4 cut(s) 864, 952, 1069, 1110
DpnII GATC 4 cut(s) 862, 950, 1067, 1108
EaeI YGGCCR 1 cut(s) 1039
Eam1104I CTCTTC 1 cut(s) 870
EarI CTCTTC 1 cut(s) 870
EciI GGCGGA 1 cut(s) 1070
Ecl136II GAGCTC 1 cut(s) 974
Eco130I CCWWGG 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 976
Eco31I GGTCTC 1 cut(s) 987
Eco32I GATATC 1 cut(s) 1439
Eco47I GGWCC 3 cut(s) 732, 1016, 1057
Eco53kI GAGCTC 1 cut(s) 974
Eco88I CYCGRG 1 cut(s) 984
Eco91I GGTNACC 1 cut(s) 57
EcoICRI GAGCTC 1 cut(s) 974
EcoO65I GGTNACC 1 cut(s) 57
EcoRII CCWGG 2 cut(s) 286, 1339
EcoRV GATATC 1 cut(s) 1439
EcoT14I CCWWGG 1 cut(s) 1081
EcoT38I GRGCYC 1 cut(s) 976
EgeI GGCGCC 1 cut(s) 293
EheI GGCGCC 1 cut(s) 293
ErhI CCWWGG 1 cut(s) 1081
FaeI CATG 3 cut(s) 373, 383, 1219
FalI AAGNNNNNCTT 2 cut(s) 867, 899
FaqI GGGAC 1 cut(s) 1146
FatI CATG 3 cut(s) 369, 379, 1215
FauI CCCGC 1 cut(s) 751
FauNDI CATATG 2 cut(s) 207, 1222
FbaI TGATCA 1 cut(s) 862
Fnu4HI GCNGC 5 cut(s) 88, 345, 584, 894, 1053
FokI GGATG 4 cut(s) 828, 842, 946, 1098
FriOI GRGCYC 1 cut(s) 976
Fsp4HI GCNGC 5 cut(s) 88, 345, 584, 894, 1053
FspBI CTAG 6 cut(s) 71, 521, 669, 954, 1100, 1298
GlaI GCGC 1 cut(s) 293
GluI GCNGC 5 cut(s) 88, 345, 584, 894, 1053
GsuI CTGGAG 1 cut(s) 1180
HaeII RGCGCY 1 cut(s) 295
HaeIII GGCC 2 cut(s) 1041, 1145
HapII CCGG 3 cut(s) 515, 1038, 1188
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 2 cut(s) 292, 1092
Hin1II CATG 3 cut(s) 373, 383, 1219
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HindIII AAGCTT 2 cut(s) 881, 1151
HinfI GANTC 9 cut(s) 183, 212, 248, 361, 419, 725, 763, 1193, 1415
HpaII CCGG 3 cut(s) 515, 1038, 1188
HphI GGTGA 7 cut(s) 370, 611, 692, 734, 1202, 1358, 1394
Hpy166II GTNNAC 3 cut(s) 244, 841, 1236
Hpy188I TCNGA 6 cut(s) 160, 260, 355, 613, 1020, 1269
Hpy188III TCNNGA 6 cut(s) 531, 575, 850, 954, 979, 1370
Hpy8I GTNNAC 3 cut(s) 244, 841, 1236
Hpy99I CGWCG 8 cut(s) 238, 326, 503, 1068, 1091, 1094, 1108, 1127
HpyAV CCTTC 2 cut(s) 1006, 1353
HpyCH4III ACNGT 3 cut(s) 234, 932, 1304
HpyCH4IV ACGT 3 cut(s) 1092, 1252, 1326
HpyCH4V TGCA 6 cut(s) 90, 226, 318, 819, 1215, 1262
HpyF10VI GCNNNNNNNGC 3 cut(s) 196, 289, 1217
HpyF3I CTNAG 4 cut(s) 159, 173, 217, 354
HpySE526I ACGT 3 cut(s) 1092, 1252, 1326
Hsp92I GRCGYC 2 cut(s) 292, 1092
Hsp92II CATG 3 cut(s) 373, 383, 1219
HspAI GCGC 1 cut(s) 292
KasI GGCGCC 1 cut(s) 291
Ksp22I TGATCA 1 cut(s) 862
Kzo9I GATC 4 cut(s) 862, 950, 1067, 1108
LmnI GCTCC 3 cut(s) 352, 517, 1077
Lsp1109I GCAGC 3 cut(s) 74, 331, 880
LweI GCATC 2 cut(s) 432, 806
MaeI CTAG 6 cut(s) 71, 521, 669, 954, 1100, 1298
MaeII ACGT 3 cut(s) 1092, 1252, 1326
MaeIII GTNAC 3 cut(s) 57, 176, 1190
MalI GATC 4 cut(s) 864, 952, 1069, 1110
MboI GATC 4 cut(s) 862, 950, 1067, 1108
MboII GAAGA 9 cut(s) 41, 292, 578, 775, 884, 887, 959, 1305, 1361
MfeI CAATTG 1 cut(s) 111
MhlI GDGCHC 2 cut(s) 976, 1249
Mly113I GGCGCC 1 cut(s) 292
MlyI GAGTC 3 cut(s) 177, 242, 1187
MmeI TCCRAC 1 cut(s) 1043
MroXI GAANNNNTTC 1 cut(s) 570
MseI TTAA 4 cut(s) 626, 744, 750, 1397
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 3 cut(s) 515, 1038, 1188
MspR9I CCNGG 2 cut(s) 288, 1341
MunI CAATTG 1 cut(s) 111
Mva1269I GAATGC 1 cut(s) 760
MvaI CCWGG 2 cut(s) 288, 1341
MwoI GCNNNNNNNGC 3 cut(s) 196, 289, 1217
NarI GGCGCC 1 cut(s) 292
NdeI CATATG 2 cut(s) 207, 1222
NdeII GATC 4 cut(s) 862, 950, 1067, 1108
NlaIII CATG 3 cut(s) 373, 383, 1219
NlaIV GGNNCC 3 cut(s) 293, 313, 1017
NmeAIII GCCGAG 1 cut(s) 1028
NmuCI GTSAC 2 cut(s) 176, 1190
NspI RCATGY 1 cut(s) 383
PciI ACATGT 1 cut(s) 379
PcsI WCGNNNNNNNCGW 1 cut(s) 1249
PctI GAATGC 1 cut(s) 760
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 6 cut(s) 212, 361, 419, 725, 763, 1415
PflFI GACNNNGTC 1 cut(s) 1091
PflMI CCANNNNNTGG 2 cut(s) 405, 1082
PkrI GCNGC 5 cut(s) 89, 346, 585, 895, 1054
Ple19I CGATCG 1 cut(s) 1070
PleI GAGTC 3 cut(s) 177, 242, 1187
PluTI GGCGCC 1 cut(s) 295
PpsI GAGTC 3 cut(s) 177, 242, 1187
Ppu21I YACGTR 1 cut(s) 1253
PscI ACATGT 1 cut(s) 379
Psp124BI GAGCTC 1 cut(s) 976
Psp6I CCWGG 2 cut(s) 286, 1339
PspEI GGTNACC 1 cut(s) 57
PspGI CCWGG 2 cut(s) 286, 1339
PspN4I GGNNCC 3 cut(s) 293, 313, 1017
PspPI GGNCC 4 cut(s) 732, 1016, 1057, 1144
PsyI GACNNNGTC 1 cut(s) 1091
PvuI CGATCG 1 cut(s) 1070
PvuII CAGCTG 1 cut(s) 87
SacI GAGCTC 1 cut(s) 976
SaqAI TTAA 4 cut(s) 626, 744, 750, 1397
SatI GCNGC 5 cut(s) 88, 345, 584, 894, 1053
Sau3AI GATC 4 cut(s) 862, 950, 1067, 1108
Sau96I GGNCC 4 cut(s) 732, 1016, 1057, 1144
SchI GAGTC 3 cut(s) 177, 242, 1187
ScrFI CCNGG 2 cut(s) 288, 1341
SduI GDGCHC 2 cut(s) 976, 1249
SfaNI GCATC 2 cut(s) 432, 806
SfoI GGCGCC 1 cut(s) 293
SinI GGWCC 3 cut(s) 732, 1016, 1057
SpeI ACTAGT 1 cut(s) 70
SsiI CCGC 5 cut(s) 584, 758, 896, 1052, 1055
SspDI GGCGCC 1 cut(s) 291
SspMI CTAG 6 cut(s) 71, 521, 669, 954, 1100, 1298
SstI GAGCTC 1 cut(s) 976
StyD4I CCNGG 2 cut(s) 286, 1339
StyI CCWWGG 1 cut(s) 1081
TaaI ACNGT 3 cut(s) 234, 932, 1304
TaiI ACGT 3 cut(s) 1095, 1255, 1329
TaqI TCGA 7 cut(s) 453, 498, 925, 970, 980, 1429, 1435
TauI GCSGC 2 cut(s) 586, 1055
TfiI GAWTC 6 cut(s) 212, 361, 419, 725, 763, 1415
Tru1I TTAA 4 cut(s) 626, 744, 750, 1397
Tru9I TTAA 4 cut(s) 626, 744, 750, 1397
TscAI CASTG 2 cut(s) 550, 1204
TseFI GTSAC 2 cut(s) 176, 1190
TseI GCWGC 3 cut(s) 87, 344, 893
Tsp45I GTSAC 2 cut(s) 176, 1190
TspDTI ATGAA 3 cut(s) 26, 755, 1239
TspGWI ACGGA 4 cut(s) 68, 806, 1121, 1140
TspRI CASTG 2 cut(s) 550, 1204
Tth111I GACNNNGTC 1 cut(s) 1091
Van91I CCANNNNNTGG 2 cut(s) 405, 1082
VpaK11BI GGWCC 3 cut(s) 732, 1016, 1057
XapI RAATTY 2 cut(s) 149, 569
XbaI TCTAGA 1 cut(s) 953
XceI RCATGY 1 cut(s) 383
XcmI CCANNNNNNNNNTGG 1 cut(s) 1204
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 6 cut(s) 71, 521, 669, 954, 1100, 1298
ZraI GACGTC 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.