Rorug02G0095500

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Forward (+)
7813824 .. 7817666
3843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0095500.1

Sequence Viewer

Length: 2484 bp
ATGGCACTCCCCAAGAGTTTTGCGTTTTCTCTTTGTTTCTGTCTTTCTGTGATCCTCTGCAGCCTCGTTGCTAATGCTACTGACGTTTCTTATGATGGCAGAGCCATCACCATTGATGGCAAACGAAGGATTTTGAATTCTGGTTCCATACATTATCCTCGAAGTACACCACAAATGTGGCCAGACTTGATTAGGAAGTCAAAGGAAGGTGGACTCGATGCAATTGAGACTTATGTCTTCTGGAATGCGCATGAACCAGTTCGTCGTGAATACGATTTTACTGGTAATCTTGACCTGGTTAGGTTTATCAAAACGATTCAAGATGAAGGACTTTATGCTGTTCTTCGGATTGGTCCATATGTTTGTGCTGAATGGAATTATGGAGGACTTCCTGTTTGGCTCCATAACCTGCCAAACTGTCATATTCGAACAGCAAACGATGTTTTCATGAATGAGATGAAGAATTTCACTACATTGATCGTGGATATGATGAAAAAAGAGAAACTATTTGCATCTCAAGGAGGCCCTATCATTATTGCTCAGATTGAAAATGAATATGGGAATGTGGAATCATACTATGGAGATGCTGGAAAAGCATACATTAACTGGTCTGCAAACTTTGCTGAATCACTAAACATCGGAGTTCCATGGATTATGTGTCAACAAAAAGATGCTCCCGCATCAATGATAAACACATGTAATGGCTGGTATTGTGACACATTCAAGCCAAGTAACCCCAACACTCCTAAGATGTGGACTGAAAATTGGACTGGCTGGTTCAAGAGCTGGGGTGGTTTAGACCCACTTAGGACTGCTGAGGACGTTGCCTTTGCAGTAGCAAGGTTTTTCCAATATGGAGGCACATTTCAAAACTATTACATGTATCATGGTGGAACAAACTTTGGTAGAACAGCAGCTTCATACATTACCACCTCGTATGATTATGATGCCCCTCTTGATGAGTATGGCCATCTGAGTCAACCAAAATGGGGGCATTTGAAAGAGCTTCATGAGGTTTTGAAATCCATGGAATATACTCTCACCTATGGCAATATTACCACCACAGAATTGGGTAACTCTGTCTCGACCACTGTGTTTGCGACAAATGAGTCAAGTAGCTGCATTTTTGGCAATGCAAATAGCAGTTCAGATGCTACAATCACTTTCCAAGGAAACACATACACCATTCCTGCTTGGTCTGTTAGTATTCTTCCTGATTGCAAAAAAGAAGCATACAACACTGCTAAGGTAAACACCCAAACTACAGTGAAAGTAAAAAGTGTCAACAAGGCTGAGGATGAACCTGAATCCCTTCATTGGTCATGGAGGCCCGAGAAGACGGATGACACCCAGCTTCTTGGAAAAGGTGAAGTTGTGGCAAGTCATCTTATGGAACAAAAAGAGGCTGCAAATGATGCTAGTGATTATCTTTGGTACATGACAAGTGTTCAACTCAGTAAGGATGATCCAATTTTGAGTGGGAACATGACACTGAGGATAAATGAAACTGGTTACATTCTTCATGCTTATGTTAATGGAGAACATGTTGGTTCTCAATGGGCTGCTTATAACGTCTTCAACTACGTTTTCGAGAAACCTATCAAGTTGGTTCCCGGAGTGAACACAATTTCATTGCTCAGTGCTACTGTTGGATTTCCGAATTATGGAGGTGGATTTGAGGACATCAAAACTGGAGTAACTGGTCCTGTTCAATTGGTTGGACAAAGTGGAGATGAAACAGTGATCAAGGATTTGTCAGAACACAAATGGTCATACAAGGTTGGACTCCATGGCTTGAAAGACGAGCTCTTTAGCTCTGCTTCTCGTTTTGCAAATAAATGGTCAGTTGAAGGTTTACCAGTAAACCGGATGATGACATGGTATAAGACAACTTTCAAAGCTCCCCTAGGAACTGAACCAGTCGTCGTGGACTTACACGGGTTGGGTAAGGGGCATGCTTGGGTGAACGGGCATAGCATTGGGCGATATTGGCCAAGCTACTTGGCTCCAGAGGATGGTTGTAGTGTTGAAGCTTGTGACTACCGTGGTCCATACGACAATAACAAGTGTGTCTTCAACTGTGGCAAACCTACTCAAAGATGGTATCATGTTCCGCGATCCTTTTTGCAAGATGATGAGAACACATTGGTCTTGTTTGAGGAATTTGGTGGCAACCCATCTTATGTGAATTTCCAGACAATCAGAGTTGGAACTATTTGTGCAAATGCATATGACAATCATACATTGGAATTGGCATGCCAAGGTCGCCCCATTTCAGCAATCAAATTTGCTAGCTTTGGAAAACCTGAAGGGACTTGTGGATCATTTAAGAAAGGCACCTGTGATGGCACAACTGCTTTGTCCATCCTTCAAAAGGAATGTGTTGGAAAAGAGTCGTGCTCAATTGACGTATCAGAAAAGAAGTTCGGTTCCACAAATTGTGGCGATATTGTGAAGAGGCTGGCCGTGGAAGCAGTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

827

Amino Acids

92.14

Weight (kDa)

5.69

Isoelectric Point (pI)

32.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 36 - 338 1.3e-118 Glycosyl hydrolases family 35
Glyco_hydro_42 PF02449 57 - 206 8.3e-07 Beta-galactosidase
GHD PF17834 363 - 417 1.6e-21 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 625 - 714 5.2e-25 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 752 - 827 3.3e-18 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1569
AasI GACNNNNNNGTC 1 cut(s) 1108
Acc16I TGCGCA 1 cut(s) 249
Acc36I ACCTGC 1 cut(s) 417
AccB1I GGYRCC 1 cut(s) 2336
AccB7I CCANNNNNTGG 1 cut(s) 2015
AccII CGCG 1 cut(s) 2116
AciI CCGC 2 cut(s) 678, 2114
AclWI GGATC 4 cut(s) 46, 1460, 2112, 2329
AcoI YGGCCR 4 cut(s) 179, 967, 1991, 2463
AcsI RAATTY 5 cut(s) 136, 463, 2162, 2188, 2285
AcuI CTGAAG 1 cut(s) 2328
AfaI GTAC 2 cut(s) 166, 1436
AfiI CCNNNNNNNGG 5 cut(s) 989, 1317, 1664, 2015, 2374
AflIII ACRYGT 3 cut(s) 695, 879, 1543
AjnI CCWGG 1 cut(s) 294
AleI CACNNNNGTG 1 cut(s) 175
Alw21I GWGCWC 2 cut(s) 1809, 2402
Alw26I GTCTC 2 cut(s) 221, 1087
AlwI GGATC 4 cut(s) 46, 1460, 2112, 2329
Ama87I CYCGRG 1 cut(s) 1331
AoxI GGCC 6 cut(s) 179, 523, 967, 1328, 1991, 2463
ApeKI GCWGC 5 cut(s) 60, 914, 1119, 1406, 1562
ApoI RAATTY 5 cut(s) 136, 463, 2162, 2188, 2285
ArsI GACNNNNNNTTYG 6 cut(s) 378, 410, 812, 844, 1826, 1858
Asp700I GAANNNNTTC 3 cut(s) 258, 464, 1311
AspA2I CCTAGG 1 cut(s) 1906
AspLEI GCGC 1 cut(s) 250
AspS9I GGNCC 5 cut(s) 353, 524, 1329, 1703, 2048
AsuC2I CCSGG 1 cut(s) 1614
AsuHPI GGTGA 4 cut(s) 100, 1033, 1379, 1975
AsuII TTCGAA 1 cut(s) 427
AsuNHI GCTAGC 1 cut(s) 2291
AvaI CYCGRG 1 cut(s) 1331
AvaII GGWCC 3 cut(s) 353, 1703, 2048
AvrII CCTAGG 1 cut(s) 1906
BalI TGGCCA 3 cut(s) 181, 969, 1993
BanI GGYRCC 1 cut(s) 2336
BanII GRGCYC 1 cut(s) 1809
BbsI GAAGAC 4 cut(s) 229, 1343, 1567, 2065
Bbv12I GWGCWC 2 cut(s) 1809, 2402
BbvCI CCTCAGC 2 cut(s) 816, 1293
BbvI GCAGC 5 cut(s) 72, 926, 1106, 1393, 1549
BccI CCATC 9 cut(s) 89, 110, 113, 978, 2009, 2094, 2185, 2339, 2372
BceAI ACGGC 1 cut(s) 2450
BciT130I CCWGG 1 cut(s) 296
BclI TGATCA 1 cut(s) 1743
BcnI CCSGG 1 cut(s) 1614
BcoDI GTCTC 2 cut(s) 221, 1087
BfaI CTAG 3 cut(s) 1419, 1907, 2292
BfmI CTRYAG 2 cut(s) 58, 1263
BfuAI ACCTGC 1 cut(s) 417
BisI GCNGC 5 cut(s) 61, 915, 1120, 1407, 1563
BlnI CCTAGG 1 cut(s) 1906
BlsI GCNGC 5 cut(s) 62, 916, 1121, 1408, 1564
Bme1390I CCNGG 2 cut(s) 296, 1614
Bme18I GGWCC 3 cut(s) 353, 1703, 2048
BmeT110I CYCGRG 1 cut(s) 1331
BmgT120I GGNCC 5 cut(s) 353, 524, 1329, 1703, 2048
BmiI GGNNCC 6 cut(s) 145, 401, 1611, 2007, 2338, 2431
BmrFI CCNGG 2 cut(s) 296, 1614
BmsI GCATC 8 cut(s) 208, 521, 574, 661, 689, 937, 1141, 1405
BmtI GCTAGC 1 cut(s) 2295
BoxI GACNNNNGTC 1 cut(s) 233
BpiI GAAGAC 4 cut(s) 229, 1343, 1567, 2065
BplI GAGNNNNNCTC 2 cut(s) 2384, 2416
BpmI CTGGAG 2 cut(s) 1713, 1992
Bpu10I CCTNAGC 3 cut(s) 816, 1245, 1293
Bpu14I TTCGAA 1 cut(s) 427
BpuEI CTTGAG 1 cut(s) 501
BpuMI CCSGG 1 cut(s) 1614
BsaJI CCNNGG 8 cut(s) 647, 1026, 1168, 1789, 1906, 2044, 2260, 2466
BsaWI WCCGGW 1 cut(s) 1866
BsaXI ACNNNNNCTCC 2 cut(s) 1530, 1560
Bsc4I CCNNNNNNNGG 5 cut(s) 989, 1317, 1664, 2015, 2374
Bse1I ACTGG 9 cut(s) 257, 286, 611, 775, 1513, 1696, 1705, 1859, 1919
Bse3DI GCAATG 2 cut(s) 1138, 1631
BseBI CCWGG 1 cut(s) 296
BseDI CCNNGG 8 cut(s) 647, 1026, 1168, 1789, 1906, 2044, 2260, 2466
BseGI GGATG 6 cut(s) 1303, 1348, 1468, 1875, 2020, 2364
BseLI CCNNNNNNNGG 5 cut(s) 989, 1317, 1664, 2015, 2374
BseMI GCAATG 2 cut(s) 1138, 1631
BseMII CTCAG 7 cut(s) 554, 807, 965, 1284, 1468, 1484, 1651
BseNI ACTGG 9 cut(s) 257, 286, 611, 775, 1513, 1696, 1705, 1859, 1919
BseXI GCAGC 5 cut(s) 72, 926, 1106, 1393, 1549
BseYI CCCAGC 2 cut(s) 786, 1350
Bsh1236I CGCG 1 cut(s) 2116
BshFI GGCC 6 cut(s) 181, 525, 969, 1330, 1993, 2465
BshNI GGYRCC 1 cut(s) 2336
BsiHKAI GWGCWC 2 cut(s) 1809, 2402
BsiHKCI CYCGRG 1 cut(s) 1331
BsiSI CCGG 2 cut(s) 1614, 1867
BslFI GGGAC 1 cut(s) 2326
BslI CCNNNNNNNGG 5 cut(s) 989, 1317, 1664, 2015, 2374
BsmAI GTCTC 2 cut(s) 221, 1087
BsmFI GGGAC 1 cut(s) 2326
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 6 cut(s) 181, 525, 969, 1330, 1993, 2465
BsoBI CYCGRG 1 cut(s) 1331
Bsp119I TTCGAA 1 cut(s) 427
Bsp1286I GDGCHC 2 cut(s) 1809, 2402
Bsp143I GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
Bsp19I CCATGG 3 cut(s) 647, 1026, 1789
BspACI CCGC 2 cut(s) 678, 2114
BspANI GGCC 6 cut(s) 181, 525, 969, 1330, 1993, 2465
BspCNI CTCAG 7 cut(s) 553, 808, 966, 1285, 1467, 1485, 1650
BspFNI CGCG 1 cut(s) 2116
BspHI TCATGA 2 cut(s) 447, 1009
BspLI GGNNCC 6 cut(s) 145, 401, 1611, 2007, 2338, 2431
BspMAI CTGCAG 1 cut(s) 62
BspMI ACCTGC 1 cut(s) 417
BspOI GCTAGC 1 cut(s) 2295
BspPI GGATC 4 cut(s) 46, 1460, 2112, 2329
BspT104I TTCGAA 1 cut(s) 427
BspT107I GGYRCC 1 cut(s) 2336
BsrDI GCAATG 2 cut(s) 1138, 1631
BsrI ACTGG 9 cut(s) 257, 286, 611, 775, 1513, 1696, 1705, 1859, 1919
BssECI CCNNGG 8 cut(s) 647, 1026, 1168, 1789, 1906, 2044, 2260, 2466
BssMI GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
BssT1I CCWWGG 6 cut(s) 647, 1026, 1168, 1789, 1906, 2260
Bst2UI CCWGG 1 cut(s) 296
Bst4CI ACNGT 7 cut(s) 419, 1093, 1267, 1648, 1741, 2045, 2081
Bst6I CTCTTC 1 cut(s) 2450
BstAPI GCANNNNNTGC 2 cut(s) 620, 1415
BstBI TTCGAA 1 cut(s) 427
BstC8I GCNNGC 4 cut(s) 1956, 2257, 2293, 2463
BstDSI CCRYGG 5 cut(s) 647, 1026, 1789, 2044, 2466
BstENI CCTNNNNNAGG 1 cut(s) 2372
BstF5I GGATG 6 cut(s) 1303, 1348, 1468, 1875, 2020, 2364
BstFNI CGCG 1 cut(s) 2116
BstHHI GCGC 1 cut(s) 250
BstKTI GATC 6 cut(s) 54, 480, 1468, 1746, 2120, 2324
BstMAI GTCTC 2 cut(s) 221, 1087
BstMBI GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
BstMWI GCNNNNNNNGC 7 cut(s) 593, 620, 1128, 1415, 1990, 2265, 2471
BstNI CCWGG 1 cut(s) 296
BstNSI RCATGY 5 cut(s) 699, 883, 1547, 1958, 2259
BstPAI GACNNNNGTC 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 294, 1612
BstSFI CTRYAG 2 cut(s) 58, 1263
BstUI CGCG 1 cut(s) 2116
BstV1I GCAGC 5 cut(s) 72, 926, 1106, 1393, 1549
BstV2I GAAGAC 4 cut(s) 229, 1343, 1567, 2065
BstXI CCANNNNNNTGG 3 cut(s) 177, 1069, 1358
BsuRI GGCC 6 cut(s) 181, 525, 969, 1330, 1993, 2465
BtgI CCRYGG 5 cut(s) 647, 1026, 1789, 2044, 2466
BtsCI GGATG 6 cut(s) 1303, 1348, 1468, 1875, 2020, 2364
BtsI GCAGTG 1 cut(s) 1239
BtsIMutI CAGTG 6 cut(s) 1089, 1239, 1272, 1490, 1645, 1746
BveI ACCTGC 1 cut(s) 417
Cac8I GCNNGC 4 cut(s) 1956, 2257, 2293, 2463
CciI TCATGA 2 cut(s) 447, 1009
CfoI GCGC 1 cut(s) 250
Cfr13I GGNCC 5 cut(s) 353, 524, 1329, 1703, 2048
CsiI ACCWGGT 1 cut(s) 294
Csp6I GTAC 2 cut(s) 165, 1435
CspCI CAANNNNNGTGG 2 cut(s) 1078, 1113
CviQI GTAC 2 cut(s) 165, 1435
DpnI GATC 6 cut(s) 53, 479, 1467, 1745, 2119, 2323
DpnII GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
DrdI GACNNNNNNGTC 1 cut(s) 1108
DseDI GACNNNNNNGTC 1 cut(s) 1108
EaeI YGGCCR 4 cut(s) 179, 967, 1991, 2463
Eam1104I CTCTTC 1 cut(s) 2450
EarI CTCTTC 1 cut(s) 2450
Ecl136II GAGCTC 1 cut(s) 1807
Eco130I CCWWGG 6 cut(s) 647, 1026, 1168, 1789, 1906, 2260
Eco24I GRGCYC 1 cut(s) 1809
Eco47I GGWCC 3 cut(s) 353, 1703, 2048
Eco53kI GAGCTC 1 cut(s) 1807
Eco57I CTGAAG 1 cut(s) 2328
Eco88I CYCGRG 1 cut(s) 1331
EcoICRI GAGCTC 1 cut(s) 1807
EcoNI CCTNNNNNAGG 1 cut(s) 2372
EcoO109I RGGNCCY 1 cut(s) 524
EcoRI GAATTC 1 cut(s) 136
EcoRII CCWGG 1 cut(s) 294
EcoT14I CCWWGG 6 cut(s) 647, 1026, 1168, 1789, 1906, 2260
EcoT22I ATGCAT 1 cut(s) 2230
EcoT38I GRGCYC 1 cut(s) 1809
ErhI CCWWGG 6 cut(s) 647, 1026, 1168, 1789, 1906, 2260
FalI AAGNNNNNCTT 2 cut(s) 2057, 2089
FaqI GGGAC 1 cut(s) 2326
FauI CCCGC 1 cut(s) 685
FauNDI CATATG 2 cut(s) 358, 2230
FbaI TGATCA 1 cut(s) 1743
Fnu4HI GCNGC 5 cut(s) 61, 915, 1120, 1407, 1563
FokI GGATG 6 cut(s) 1310, 1355, 1475, 1882, 2027, 2351
FriOI GRGCYC 1 cut(s) 1809
Fsp4HI GCNGC 5 cut(s) 61, 915, 1120, 1407, 1563
FspAI RTGCGCAY 1 cut(s) 249
FspBI CTAG 3 cut(s) 1419, 1907, 2292
FspI TGCGCA 1 cut(s) 249
GlaI GCGC 1 cut(s) 249
GluI GCNGC 5 cut(s) 61, 915, 1120, 1407, 1563
GsaI CCCAGC 2 cut(s) 790, 1354
GsuI CTGGAG 2 cut(s) 1713, 1992
HaeIII GGCC 6 cut(s) 181, 525, 969, 1330, 1993, 2465
HapII CCGG 2 cut(s) 1614, 1867
HhaI GCGC 1 cut(s) 250
Hin6I GCGC 1 cut(s) 248
HinP1I GCGC 1 cut(s) 248
HincII GTYRAC 3 cut(s) 662, 980, 1285
HindII GTYRAC 3 cut(s) 662, 980, 1285
HindIII AAGCTT 1 cut(s) 2031
HinfI GANTC 9 cut(s) 213, 316, 569, 626, 976, 1109, 1307, 1785, 2393
HpaII CCGG 2 cut(s) 1614, 1867
HphI GGTGA 4 cut(s) 100, 1033, 1379, 1975
Hpy188I TCNGA 9 cut(s) 348, 543, 641, 975, 1150, 1659, 1759, 2204, 2416
Hpy99I CGWCG 2 cut(s) 267, 1928
HpyAV CCTTC 7 cut(s) 120, 200, 320, 1322, 1844, 2303, 2378
HpyCH4III ACNGT 7 cut(s) 419, 1093, 1267, 1648, 1741, 2045, 2081
HpyCH4IV ACGT 5 cut(s) 84, 822, 1572, 1584, 2409
HpyF10VI GCNNNNNNNGC 7 cut(s) 593, 620, 1128, 1415, 1990, 2265, 2471
HpySE526I ACGT 5 cut(s) 84, 822, 1572, 1584, 2409
HspAI GCGC 1 cut(s) 248
Ksp22I TGATCA 1 cut(s) 1743
Kzo9I GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
LmnI GCTCC 4 cut(s) 405, 679, 1906, 2011
Lsp1109I GCAGC 5 cut(s) 72, 926, 1106, 1393, 1549
LweI GCATC 8 cut(s) 208, 521, 574, 661, 689, 937, 1141, 1405
MabI ACCWGGT 1 cut(s) 294
MaeI CTAG 3 cut(s) 1419, 1907, 2292
MaeII ACGT 5 cut(s) 84, 822, 1572, 1584, 2409
MaeIII GTNAC 6 cut(s) 713, 731, 1073, 1511, 1696, 2036
MalI GATC 6 cut(s) 53, 479, 1467, 1745, 2119, 2323
MboI GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
MboII GAAGA 9 cut(s) 229, 335, 472, 1202, 1348, 1511, 1567, 2065, 2467
MfeI CAATTG 3 cut(s) 222, 1712, 2403
MhlI GDGCHC 2 cut(s) 1809, 2402
MlsI TGGCCA 3 cut(s) 181, 969, 1993
MluNI TGGCCA 3 cut(s) 181, 969, 1993
MlyI GAGTC 5 cut(s) 207, 985, 1118, 1779, 2402
MmeI TCCRAC 5 cut(s) 1630, 1699, 1762, 2188, 2365
Mox20I TGGCCA 3 cut(s) 181, 969, 1993
Mph1103I ATGCAT 1 cut(s) 2230
MroXI GAANNNNTTC 3 cut(s) 258, 464, 1311
MscI TGGCCA 3 cut(s) 181, 969, 1993
MseI TTAA 3 cut(s) 603, 1533, 2328
MslI CAYNNNNRTG 2 cut(s) 175, 1527
Msp20I TGGCCA 3 cut(s) 181, 969, 1993
MspI CCGG 2 cut(s) 1614, 1867
MspR9I CCNGG 2 cut(s) 296, 1614
MunI CAATTG 3 cut(s) 222, 1712, 2403
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 1 cut(s) 296
MvnI CGCG 1 cut(s) 2116
MwoI GCNNNNNNNGC 7 cut(s) 593, 620, 1128, 1415, 1990, 2265, 2471
NciI CCSGG 1 cut(s) 1614
NcoI CCATGG 3 cut(s) 647, 1026, 1789
NdeI CATATG 2 cut(s) 358, 2230
NdeII GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
NheI GCTAGC 1 cut(s) 2291
NlaIV GGNNCC 6 cut(s) 145, 401, 1611, 2007, 2338, 2431
NmuCI GTSAC 2 cut(s) 713, 2036
NsbI TGCGCA 1 cut(s) 249
NsiI ATGCAT 1 cut(s) 2230
NspI RCATGY 5 cut(s) 699, 883, 1547, 1958, 2259
NspV TTCGAA 1 cut(s) 427
OliI CACNNNNGTG 1 cut(s) 175
PaeI GCATGC 2 cut(s) 1958, 2259
PagI TCATGA 2 cut(s) 447, 1009
PciI ACATGT 3 cut(s) 695, 879, 1543
PctI GAATGC 1 cut(s) 250
PdmI GAANNNNTTC 3 cut(s) 258, 464, 1311
PfeI GAWTC 4 cut(s) 316, 569, 626, 1307
PflMI CCANNNNNTGG 1 cut(s) 2015
PfoI TCCNGGA 1 cut(s) 1612
PkrI GCNGC 5 cut(s) 62, 916, 1121, 1408, 1564
PleI GAGTC 5 cut(s) 207, 984, 1117, 1779, 2401
PpsI GAGTC 5 cut(s) 207, 984, 1117, 1779, 2401
PscI ACATGT 3 cut(s) 695, 879, 1543
PshAI GACNNNNGTC 1 cut(s) 233
PsiI TTATAA 1 cut(s) 1569
Psp124BI GAGCTC 1 cut(s) 1809
Psp6I CCWGG 1 cut(s) 294
PspFI CCCAGC 2 cut(s) 786, 1350
PspGI CCWGG 1 cut(s) 294
PspN4I GGNNCC 6 cut(s) 145, 401, 1611, 2007, 2338, 2431
PspPI GGNCC 5 cut(s) 353, 524, 1329, 1703, 2048
PstI CTGCAG 1 cut(s) 62
RsaI GTAC 2 cut(s) 166, 1436
RsaNI GTAC 2 cut(s) 165, 1435
RseI CAYNNNNRTG 2 cut(s) 175, 1527
SacI GAGCTC 1 cut(s) 1809
SaqAI TTAA 3 cut(s) 603, 1533, 2328
SatI GCNGC 5 cut(s) 61, 915, 1120, 1407, 1563
Sau3AI GATC 6 cut(s) 51, 477, 1465, 1743, 2117, 2321
Sau96I GGNCC 5 cut(s) 353, 524, 1329, 1703, 2048
SchI GAGTC 5 cut(s) 207, 985, 1118, 1779, 2402
ScrFI CCNGG 2 cut(s) 296, 1614
SduI GDGCHC 2 cut(s) 1809, 2402
SexAI ACCWGGT 1 cut(s) 294
SfaNI GCATC 8 cut(s) 208, 521, 574, 661, 689, 937, 1141, 1405
SfcI CTRYAG 2 cut(s) 58, 1263
SfuI TTCGAA 1 cut(s) 427
SinI GGWCC 3 cut(s) 353, 1703, 2048
SmiMI CAYNNNNRTG 2 cut(s) 175, 1527
SmlI CTYRAG 1 cut(s) 516
SmoI CTYRAG 1 cut(s) 516
SphI GCATGC 2 cut(s) 1958, 2259
SsiI CCGC 2 cut(s) 678, 2114
SspI AATATT 1 cut(s) 1054
SspMI CTAG 3 cut(s) 1419, 1907, 2292
SstI GAGCTC 1 cut(s) 1809
StyD4I CCNGG 2 cut(s) 294, 1612
StyI CCWWGG 6 cut(s) 647, 1026, 1168, 1789, 1906, 2260
TaaI ACNGT 7 cut(s) 419, 1093, 1267, 1648, 1741, 2045, 2081
TaiI ACGT 5 cut(s) 87, 825, 1575, 1587, 2412
TaqI TCGA 5 cut(s) 160, 216, 427, 1085, 1590
TatI WGTACW 1 cut(s) 164
TfiI GAWTC 4 cut(s) 316, 569, 626, 1307
Tru1I TTAA 3 cut(s) 603, 1533, 2328
Tru9I TTAA 3 cut(s) 603, 1533, 2328
TscAI CASTG 6 cut(s) 1096, 1246, 1272, 1497, 1645, 1746
TseFI GTSAC 2 cut(s) 713, 2036
TseI GCWGC 5 cut(s) 60, 914, 1119, 1406, 1562
Tsp45I GTSAC 2 cut(s) 713, 2036
TspGWI ACGGA 1 cut(s) 1355
TspRI CASTG 6 cut(s) 1096, 1246, 1272, 1497, 1645, 1746
Van91I CCANNNNNTGG 1 cut(s) 2015
VpaK11BI GGWCC 3 cut(s) 353, 1703, 2048
XagI CCTNNNNNAGG 1 cut(s) 2372
XapI RAATTY 5 cut(s) 136, 463, 2162, 2188, 2285
XceI RCATGY 5 cut(s) 699, 883, 1547, 1958, 2259
XcmI CCANNNNNNNNNTGG 1 cut(s) 1066
XmaJI CCTAGG 1 cut(s) 1906
XmnI GAANNNNTTC 3 cut(s) 258, 464, 1311
XspI CTAG 3 cut(s) 1419, 1907, 2292
Zsp2I ATGCAT 1 cut(s) 2230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.