FvH4_6g14972

F-box protein CPR30-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000082
Physical Location & Seq
Reverse (-)
9285725 .. 9286828
1104 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14972.t1

Sequence Viewer

Length: 1104 bp
ATGGAGGAAGCAACCCTACCCGAAGAGATTATAGTGCATATCGTCACCCGGCTGCCCGTGAAATCCTTACTCCGATTCACCTGTGTTTCCAAACGCTTCCATTCCATCATTCTCTCCGACCCCAAATTCGCTAAATCCCAATTGCAAGCAGCTCGTGACCGCAATACCCATACTCAGAGACTCCTCTACTCCGCAGACGGTCCTCGGTTCAAATCCCTAGACCTTGAAACGCCGTCGTTTGGGGACCCTTCCTCTGTCAGAGAGCTCCAATTGCCTTTCCAGCCAGATTCCAAATGTGTCACGCTATTGGGCTCCTGCAACGGTATTGTATTTCTCACTAATAATAAGGAAGTATATTATATGTGGAACCCGTCAACTAGATTCTTCAACAGATTACCTGACCCTGGTTTTTCACCAAGTCAAAGGGCGCTCGAGTTTTATGGTGTTGGCTATCTGCCGGCCACCGACGACTACAAAGATTTTGTAGTCTCCCCAGAATTGCTCAATAGCAAGAATATTTTGAGCCATATCCCGAATGAGGCCGCCATTTACTCGTCCGGATCGAACGCTTGGAAAACATTTGAGTTCGATGCATTACCTGTTATGGATTGGGATTGTCAGGGGACTCTTTTGAAAGAGGCCCTTCATTGGCTCGGTACTCAAAATCAAATCGTTGCTTTCGATTTGGCTCAGGAGGAGCAGCACAAGTTCAGGAAAATGCAGCTGCCGCCCAACCTCCATAATGGAAGAGGAGGTGGCAATTATTCAAACCGTTTTAGCGTTTCTGCTGTTGGAGGATGCCTGTCGCTGGCTCGTTATCAGCGGGCTGCCATTGACTGCATTGATGTATGGGTCATGAAAGAATATGATGTGCATGACTCGTGGACTAAACTTTATAACTTGAAGTTGTCAGACCCCCTTAAGGAGCGATGGAATTTCAGTCGTGTCTACATTATGGAAGCTAGTGTGGTTGCCGAGATATTTTCTCGAGTCCTTATGAGAGAACTGGTAAAGATTGATCAGACAGGAGAAGACAATATGATTGAGGGTGATTGGAATGACATGGTTCAATATGAAGAGAGTCTACTTCGGATAGATCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

368

Amino Acids

42.09

Weight (kDa)

5.66

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 40 3.1e-08 F-box-like
F-box PF00646 6 - 43 1.6e-09 F-box domain
FBA_3 PF08268 82 - 304 4.2e-10 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 85 - 301 7.1e-08 KIB1-4 beta-propeller
FBA_1 PF07734 100 - 347 1.6e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 897
AccI GTMKAC 2 cut(s) 948, 1084
AccIII TCCGGA 1 cut(s) 557
AciI CCGC 5 cut(s) 160, 192, 543, 728, 823
AclWI GGATC 1 cut(s) 568
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 2 cut(s) 125, 934
AfaI GTAC 1 cut(s) 658
AfiI CCNNNNNNNGG 6 cut(s) 239, 404, 538, 648, 808, 922
AflII CTTAAG 1 cut(s) 920
AgsI TTSAA 7 cut(s) 211, 227, 388, 634, 768, 904, 1070
AjnI CCWGG 1 cut(s) 403
AluBI AGCT 4 cut(s) 152, 265, 724, 962
AluI AGCT 4 cut(s) 152, 265, 724, 962
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 2 cut(s) 172, 493
AlwI GGATC 1 cut(s) 568
Ama87I CYCGRG 2 cut(s) 431, 987
Aor13HI TCCGGA 1 cut(s) 557
AoxI GGCC 3 cut(s) 459, 540, 639
ApeKI GCWGC 6 cut(s) 52, 149, 700, 721, 724, 827
ApoI RAATTY 2 cut(s) 125, 934
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AspLEI GCGC 1 cut(s) 430
AspS9I GGNCC 3 cut(s) 200, 244, 640
AsuC2I CCSGG 1 cut(s) 49
AsuHPI GGTGA 4 cut(s) 37, 70, 405, 1061
AvaI CYCGRG 2 cut(s) 431, 987
AvaII GGWCC 2 cut(s) 200, 244
BanII GRGCYC 2 cut(s) 267, 314
BarI GAAGNNNNNNTAC 3 cut(s) 32, 1068, 1100
BauI CACGAG 2 cut(s) 153, 880
BbsI GAAGAC 1 cut(s) 1038
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 6 cut(s) 39, 161, 711, 712, 733, 814
BccI CCATC 2 cut(s) 113, 924
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BciT130I CCWGG 1 cut(s) 405
BclI TGATCA 1 cut(s) 1018
BcnI CCSGG 1 cut(s) 49
BcoDI GTCTC 2 cut(s) 172, 493
BfaI CTAG 3 cut(s) 218, 378, 963
BfoI RGCGCY 1 cut(s) 431
BfrI CTTAAG 1 cut(s) 920
BisI GCNGC 8 cut(s) 53, 150, 543, 701, 722, 725, 728, 828
BlsI GCNGC 8 cut(s) 54, 151, 544, 702, 723, 726, 729, 829
Bme1390I CCNGG 2 cut(s) 49, 405
Bme18I GGWCC 2 cut(s) 200, 244
BmeT110I CYCGRG 2 cut(s) 431, 987
BmgT120I GGNCC 3 cut(s) 200, 244, 640
BmiI GGNNCC 4 cut(s) 245, 246, 313, 368
BmrFI CCNGG 2 cut(s) 49, 405
BmsI GCATC 2 cut(s) 580, 788
BpiI GAAGAC 1 cut(s) 1038
Bpu10I CCTNAGC 1 cut(s) 690
BpuMI CCSGG 1 cut(s) 49
BsaJI CCNNGG 2 cut(s) 203, 403
BsaWI WCCGGW 1 cut(s) 557
Bsc4I CCNNNNNNNGG 6 cut(s) 239, 404, 538, 648, 808, 922
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 557
BseBI CCWGG 1 cut(s) 405
BseDI CCNNGG 2 cut(s) 203, 403
BseGI GGATG 1 cut(s) 803
BseLI CCNNNNNNNGG 6 cut(s) 239, 404, 538, 648, 808, 922
BseMII CTCAG 2 cut(s) 188, 704
BseNI ACTGG 1 cut(s) 1011
BseRI GAGGAG 3 cut(s) 173, 710, 765
BseXI GCAGC 6 cut(s) 39, 161, 711, 712, 733, 814
BshFI GGCC 3 cut(s) 461, 542, 641
BsiHKAI GWGCWC 1 cut(s) 267
BsiHKCI CYCGRG 2 cut(s) 431, 987
BsiSI CCGG 3 cut(s) 49, 458, 558
BslFI GGGAC 2 cut(s) 257, 637
BslI CCNNNNNNNGG 6 cut(s) 239, 404, 538, 648, 808, 922
BsmAI GTCTC 2 cut(s) 172, 493
BsmFI GGGAC 2 cut(s) 257, 637
BsnI GGCC 3 cut(s) 461, 542, 641
BsoBI CYCGRG 2 cut(s) 431, 987
Bsp1286I GDGCHC 2 cut(s) 267, 314
Bsp13I TCCGGA 1 cut(s) 557
Bsp143I GATC 3 cut(s) 560, 1018, 1096
BspACI CCGC 5 cut(s) 160, 192, 543, 728, 823
BspANI GGCC 3 cut(s) 461, 542, 641
BspCNI CTCAG 2 cut(s) 187, 703
BspEI TCCGGA 1 cut(s) 557
BspHI TCATGA 1 cut(s) 855
BspLI GGNNCC 4 cut(s) 245, 246, 313, 368
BspPI GGATC 1 cut(s) 568
BspTI CTTAAG 1 cut(s) 920
BsrFI RCCGGY 1 cut(s) 457
BsrI ACTGG 1 cut(s) 1011
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 2 cut(s) 203, 403
BssMI GATC 3 cut(s) 560, 1018, 1096
BssSI CACGAG 2 cut(s) 153, 880
Bst2BI CACGAG 2 cut(s) 153, 880
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 3 cut(s) 200, 323, 773
Bst6I CTCTTC 3 cut(s) 18, 742, 1071
BstAFI CTTAAG 1 cut(s) 920
BstC8I GCNNGC 4 cut(s) 147, 459, 810, 825
BstDEI CTNAG 2 cut(s) 174, 690
BstF5I GGATG 1 cut(s) 803
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 1 cut(s) 430
BstKTI GATC 3 cut(s) 563, 1021, 1099
BstMAI GTCTC 2 cut(s) 172, 493
BstMBI GATC 3 cut(s) 560, 1018, 1096
BstMWI GCNNNNNNNGC 3 cut(s) 271, 280, 727
BstNI CCWGG 1 cut(s) 405
BstSCI CCNGG 2 cut(s) 47, 403
BstV1I GCAGC 6 cut(s) 39, 161, 711, 712, 733, 814
BstV2I GAAGAC 1 cut(s) 1038
BsuRI GGCC 3 cut(s) 461, 542, 641
BtgZI GCGATG 1 cut(s) 943
BtsCI GGATG 1 cut(s) 803
Cac8I GCNNGC 4 cut(s) 147, 459, 810, 825
CciI TCATGA 1 cut(s) 855
CfoI GCGC 1 cut(s) 430
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 3 cut(s) 200, 244, 640
Csp6I GTAC 1 cut(s) 657
CviAII CATG 3 cut(s) 856, 875, 1063
CviQI GTAC 1 cut(s) 657
DdeI CTNAG 2 cut(s) 174, 690
DpnI GATC 3 cut(s) 562, 1020, 1098
DpnII GATC 3 cut(s) 560, 1018, 1096
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 3 cut(s) 18, 742, 1071
EarI CTCTTC 3 cut(s) 18, 742, 1071
Ecl136II GAGCTC 1 cut(s) 265
Eco24I GRGCYC 2 cut(s) 267, 314
Eco47I GGWCC 2 cut(s) 200, 244
Eco53kI GAGCTC 1 cut(s) 265
Eco88I CYCGRG 2 cut(s) 431, 987
EcoICRI GAGCTC 1 cut(s) 265
EcoO109I RGGNCCY 2 cut(s) 244, 640
EcoRII CCWGG 1 cut(s) 403
EcoT22I ATGCAT 1 cut(s) 595
EcoT38I GRGCYC 2 cut(s) 267, 314
FaeI CATG 3 cut(s) 859, 878, 1066
FalI AAGNNNNNCTT 2 cut(s) 627, 659
FaqI GGGAC 2 cut(s) 257, 637
FatI CATG 3 cut(s) 855, 874, 1062
FauI CCCGC 1 cut(s) 816
FbaI TGATCA 1 cut(s) 1018
FblI GTMKAC 2 cut(s) 948, 1084
Fnu4HI GCNGC 8 cut(s) 53, 150, 543, 701, 722, 725, 728, 828
FokI GGATG 1 cut(s) 810
FriOI GRGCYC 2 cut(s) 267, 314
Fsp4HI GCNGC 8 cut(s) 53, 150, 543, 701, 722, 725, 728, 828
FspBI CTAG 3 cut(s) 218, 378, 963
GlaI GCGC 1 cut(s) 429
GluI GCNGC 8 cut(s) 53, 150, 543, 701, 722, 725, 728, 828
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 3 cut(s) 461, 542, 641
HapII CCGG 3 cut(s) 49, 458, 558
HhaI GCGC 1 cut(s) 430
Hin1II CATG 3 cut(s) 859, 878, 1066
Hin6I GCGC 1 cut(s) 428
HinP1I GCGC 1 cut(s) 428
HincII GTYRAC 1 cut(s) 375
HindII GTYRAC 1 cut(s) 375
HinfI GANTC 8 cut(s) 75, 180, 287, 381, 625, 878, 990, 1081
HpaII CCGG 3 cut(s) 49, 458, 558
HphI GGTGA 4 cut(s) 37, 70, 405, 1061
Hpy166II GTNNAC 4 cut(s) 375, 885, 949, 1085
Hpy188I TCNGA 7 cut(s) 74, 118, 177, 260, 913, 1023, 1092
Hpy188III TCNNGA 7 cut(s) 155, 532, 558, 692, 712, 856, 987
Hpy8I GTNNAC 4 cut(s) 375, 885, 949, 1085
Hpy99I CGWCG 2 cut(s) 238, 470
HpyAV CCTTC 2 cut(s) 258, 653
HpyCH4III ACNGT 3 cut(s) 200, 323, 773
HpyCH4V TGCA 7 cut(s) 37, 145, 318, 593, 721, 840, 874
HpyF10VI GCNNNNNNNGC 3 cut(s) 271, 280, 727
HpyF3I CTNAG 2 cut(s) 174, 690
Hsp92II CATG 3 cut(s) 859, 878, 1066
HspAI GCGC 1 cut(s) 428
KflI GGGWCCC 1 cut(s) 244
Kpn2I TCCGGA 1 cut(s) 557
KroI GCCGGC 1 cut(s) 457
KroNI GCCGGC 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 1018
Kzo9I GATC 3 cut(s) 560, 1018, 1096
LmnI GCTCC 4 cut(s) 270, 317, 697, 925
Lsp1109I GCAGC 6 cut(s) 39, 161, 711, 712, 733, 814
LweI GCATC 2 cut(s) 580, 788
MaeI CTAG 3 cut(s) 218, 378, 963
MaeIII GTNAC 3 cut(s) 43, 155, 298
MalI GATC 3 cut(s) 562, 1020, 1098
MboI GATC 3 cut(s) 560, 1018, 1096
MboII GAAGA 5 cut(s) 35, 376, 759, 1043, 1088
MfeI CAATTG 2 cut(s) 140, 269
MhlI GDGCHC 2 cut(s) 267, 314
MluCI AATT 6 cut(s) 125, 140, 269, 497, 760, 934
MlyI GAGTC 5 cut(s) 174, 619, 872, 999, 1090
MmeI TCCRAC 2 cut(s) 141, 772
Mph1103I ATGCAT 1 cut(s) 595
MroI TCCGGA 1 cut(s) 557
MroNI GCCGGC 1 cut(s) 457
MseI TTAA 1 cut(s) 921
MspA1I CMGCKG 2 cut(s) 724, 823
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 3 cut(s) 49, 458, 558
MspR9I CCNGG 2 cut(s) 49, 405
MunI CAATTG 2 cut(s) 140, 269
MvaI CCWGG 1 cut(s) 405
MwoI GCNNNNNNNGC 3 cut(s) 271, 280, 727
NaeI GCCGGC 1 cut(s) 459
NciI CCSGG 1 cut(s) 49
NdeII GATC 3 cut(s) 560, 1018, 1096
NgoMIV GCCGGC 1 cut(s) 457
NlaIII CATG 3 cut(s) 859, 878, 1066
NlaIV GGNNCC 4 cut(s) 245, 246, 313, 368
NmeAIII GCCGAG 1 cut(s) 1000
NmuCI GTSAC 3 cut(s) 43, 155, 298
NsiI ATGCAT 1 cut(s) 595
PaeR7I CTCGAG 2 cut(s) 431, 987
PagI TCATGA 1 cut(s) 855
PcsI WCGNNNNNNNCGW 2 cut(s) 560, 678
PdiI GCCGGC 1 cut(s) 459
PfeI GAWTC 3 cut(s) 75, 287, 381
PkrI GCNGC 8 cut(s) 54, 151, 544, 702, 723, 726, 729, 829
PleI GAGTC 5 cut(s) 174, 619, 872, 998, 1089
PpsI GAGTC 5 cut(s) 174, 619, 872, 998, 1089
PpuMI RGGWCCY 1 cut(s) 244
PsiI TTATAA 1 cut(s) 897
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 1 cut(s) 403
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 4 cut(s) 245, 246, 313, 368
PspPI GGNCC 3 cut(s) 200, 244, 640
PspPPI RGGWCCY 1 cut(s) 244
PspXI VCTCGAGB 1 cut(s) 431
PvuII CAGCTG 1 cut(s) 724
RsaI GTAC 1 cut(s) 658
RsaNI GTAC 1 cut(s) 657
SacI GAGCTC 1 cut(s) 267
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 8 cut(s) 53, 150, 543, 701, 722, 725, 728, 828
Sau3AI GATC 3 cut(s) 560, 1018, 1096
Sau96I GGNCC 3 cut(s) 200, 244, 640
SchI GAGTC 5 cut(s) 174, 619, 872, 999, 1090
ScrFI CCNGG 2 cut(s) 49, 405
SduI GDGCHC 2 cut(s) 267, 314
SfaNI GCATC 2 cut(s) 580, 788
Sfr274I CTCGAG 2 cut(s) 431, 987
SinI GGWCC 2 cut(s) 200, 244
SlaI CTCGAG 2 cut(s) 431, 987
SmlI CTYRAG 3 cut(s) 431, 920, 987
SmoI CTYRAG 3 cut(s) 431, 920, 987
Sse9I AATT 6 cut(s) 125, 140, 269, 497, 760, 934
SsiI CCGC 5 cut(s) 160, 192, 543, 728, 823
SspI AATATT 1 cut(s) 517
SspMI CTAG 3 cut(s) 218, 378, 963
SstI GAGCTC 1 cut(s) 267
StyD4I CCNGG 2 cut(s) 47, 403
TaaI ACNGT 3 cut(s) 200, 323, 773
TaqI TCGA 5 cut(s) 432, 563, 588, 681, 988
TasI AATT 6 cut(s) 125, 140, 269, 497, 760, 934
TauI GCSGC 2 cut(s) 545, 730
TfiI GAWTC 3 cut(s) 75, 287, 381
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TseFI GTSAC 3 cut(s) 43, 155, 298
TseI GCWGC 6 cut(s) 52, 149, 700, 721, 724, 827
Tsp45I GTSAC 3 cut(s) 43, 155, 298
TspDTI ATGAA 3 cut(s) 635, 872, 1089
Vha464I CTTAAG 1 cut(s) 920
VpaK11BI GGWCC 2 cut(s) 200, 244
XapI RAATTY 2 cut(s) 125, 934
XhoI CTCGAG 2 cut(s) 431, 987
XmiI GTMKAC 2 cut(s) 948, 1084
XspI CTAG 3 cut(s) 218, 378, 963
Zsp2I ATGCAT 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.