A Receptor for Ubiquitination Targets
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_1 | PF07734 | 48 - 227 | 3.7e-09 | F-box associated beta propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 84 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 177 |
| AccI | GTMKAC | 1 cut(s) | 763 |
| AciI | CCGC | 3 cut(s) | 356, 530, 668 |
| AclWI | GGATC | 1 cut(s) | 739 |
| AcsI | RAATTY | 1 cut(s) | 341 |
| AcyI | GRCGYC | 1 cut(s) | 85 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 177, 368 |
| AgsI | TTSAA | 3 cut(s) | 73, 191, 464 |
| AjnI | CCWGG | 2 cut(s) | 79, 727 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 474, 506 |
| AluBI | AGCT | 4 cut(s) | 58, 292, 511, 655 |
| AluI | AGCT | 4 cut(s) | 58, 292, 511, 655 |
| Alw26I | GTCTC | 1 cut(s) | 368 |
| AlwI | GGATC | 1 cut(s) | 739 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| ApoI | RAATTY | 1 cut(s) | 341 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 342 |
| AspLEI | GCGC | 1 cut(s) | 87 |
| AspS9I | GGNCC | 2 cut(s) | 504, 710 |
| AsuHPI | GGTGA | 5 cut(s) | 142, 383, 464, 484, 506 |
| AvaII | GGWCC | 2 cut(s) | 504, 710 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 31, 64 |
| BanI | GGYRCC | 1 cut(s) | 84 |
| BbsI | GAAGAC | 2 cut(s) | 85, 547 |
| BbvCI | CCTCAGC | 1 cut(s) | 789 |
| BbvI | GCAGC | 1 cut(s) | 103 |
| BccI | CCATC | 5 cut(s) | 130, 320, 443, 472, 596 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 141, 175, 670, 704 |
| BciT130I | CCWGG | 2 cut(s) | 81, 729 |
| BclI | TGATCA | 1 cut(s) | 634 |
| BcoDI | GTCTC | 1 cut(s) | 368 |
| BfaI | CTAG | 2 cut(s) | 293, 783 |
| BfmI | CTRYAG | 1 cut(s) | 147 |
| BfoI | RGCGCY | 1 cut(s) | 88 |
| BisI | GCNGC | 2 cut(s) | 117, 356 |
| BlsI | GCNGC | 2 cut(s) | 118, 357 |
| Bme1390I | CCNGG | 2 cut(s) | 81, 729 |
| Bme18I | GGWCC | 2 cut(s) | 504, 710 |
| BmgT120I | GGNCC | 2 cut(s) | 504, 710 |
| BmiI | GGNNCC | 2 cut(s) | 86, 106 |
| BmrFI | CCNGG | 2 cut(s) | 81, 729 |
| BmsI | GCATC | 2 cut(s) | 204, 578 |
| BpiI | GAAGAC | 2 cut(s) | 85, 547 |
| Bpu10I | CCTNAGC | 1 cut(s) | 789 |
| BsaHI | GRCGYC | 1 cut(s) | 85 |
| BsaJI | CCNNGG | 1 cut(s) | 80 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 177, 368 |
| Bse3DI | GCAATG | 1 cut(s) | 118 |
| BseBI | CCWGG | 2 cut(s) | 81, 729 |
| BseDI | CCNNGG | 1 cut(s) | 80 |
| BseGI | GGATG | 2 cut(s) | 593, 607 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 177, 368 |
| BseMI | GCAATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 2 cut(s) | 117, 780 |
| BseXI | GCAGC | 1 cut(s) | 103 |
| BshNI | GGYRCC | 1 cut(s) | 84 |
| BsiSI | CCGG | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 177, 368 |
| BsmAI | GTCTC | 1 cut(s) | 368 |
| BsmI | GAATGC | 1 cut(s) | 532 |
| Bsp143I | GATC | 3 cut(s) | 389, 634, 744 |
| BspACI | CCGC | 3 cut(s) | 356, 530, 668 |
| BspCNI | CTCAG | 2 cut(s) | 118, 781 |
| BspHI | TCATGA | 1 cut(s) | 775 |
| BspLI | GGNNCC | 2 cut(s) | 86, 106 |
| BspPI | GGATC | 1 cut(s) | 739 |
| BspT107I | GGYRCC | 1 cut(s) | 84 |
| BsrDI | GCAATG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 1 cut(s) | 80 |
| BssMI | GATC | 3 cut(s) | 389, 634, 744 |
| BssNI | GRCGYC | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 2 cut(s) | 81, 729 |
| Bst4CI | ACNGT | 2 cut(s) | 27, 737 |
| Bst6I | CTCTTC | 1 cut(s) | 642 |
| BstACI | GRCGYC | 1 cut(s) | 85 |
| BstDEI | CTNAG | 3 cut(s) | 10, 126, 789 |
| BstF5I | GGATG | 2 cut(s) | 593, 607 |
| BstH2I | RGCGCY | 1 cut(s) | 88 |
| BstHHI | GCGC | 1 cut(s) | 87 |
| BstKTI | GATC | 3 cut(s) | 392, 637, 747 |
| BstMAI | GTCTC | 1 cut(s) | 368 |
| BstMBI | GATC | 3 cut(s) | 389, 634, 744 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstNI | CCWGG | 2 cut(s) | 81, 729 |
| BstSCI | CCNGG | 2 cut(s) | 79, 727 |
| BstSFI | CTRYAG | 1 cut(s) | 147 |
| BstV1I | GCAGC | 1 cut(s) | 103 |
| BstV2I | GAAGAC | 2 cut(s) | 85, 547 |
| BtsCI | GGATG | 2 cut(s) | 593, 607 |
| BtsI | GCAGTG | 2 cut(s) | 159, 315 |
| BtsIMutI | CAGTG | 3 cut(s) | 159, 315, 733 |
| CciI | TCATGA | 1 cut(s) | 775 |
| CfoI | GCGC | 1 cut(s) | 87 |
| Cfr13I | GGNCC | 2 cut(s) | 504, 710 |
| CviAII | CATG | 2 cut(s) | 142, 776 |
| DdeI | CTNAG | 3 cut(s) | 10, 126, 789 |
| DinI | GGCGCC | 1 cut(s) | 86 |
| DpnI | GATC | 3 cut(s) | 391, 636, 746 |
| DpnII | GATC | 3 cut(s) | 389, 634, 744 |
| DraI | TTTAAA | 1 cut(s) | 399 |
| Eam1104I | CTCTTC | 1 cut(s) | 642 |
| EarI | CTCTTC | 1 cut(s) | 642 |
| Eco47I | GGWCC | 2 cut(s) | 504, 710 |
| EcoRII | CCWGG | 2 cut(s) | 79, 727 |
| EgeI | GGCGCC | 1 cut(s) | 86 |
| EheI | GGCGCC | 1 cut(s) | 86 |
| FaeI | CATG | 2 cut(s) | 145, 779 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 639, 671 |
| FatI | CATG | 2 cut(s) | 141, 775 |
| FauI | CCCGC | 1 cut(s) | 523 |
| FauNDI | CATATG | 1 cut(s) | 741 |
| FbaI | TGATCA | 1 cut(s) | 634 |
| FblI | GTMKAC | 1 cut(s) | 763 |
| Fnu4HI | GCNGC | 2 cut(s) | 117, 356 |
| FokI | GGATG | 2 cut(s) | 600, 614 |
| Fsp4HI | GCNGC | 2 cut(s) | 117, 356 |
| FspBI | CTAG | 2 cut(s) | 293, 783 |
| GlaI | GCGC | 1 cut(s) | 86 |
| GluI | GCNGC | 2 cut(s) | 117, 356 |
| HaeII | RGCGCY | 1 cut(s) | 88 |
| HapII | CCGG | 1 cut(s) | 287 |
| HhaI | GCGC | 1 cut(s) | 87 |
| Hin1I | GRCGYC | 1 cut(s) | 85 |
| Hin1II | CATG | 2 cut(s) | 145, 779 |
| Hin6I | GCGC | 1 cut(s) | 85 |
| HinP1I | GCGC | 1 cut(s) | 85 |
| HindIII | AAGCTT | 1 cut(s) | 653 |
| HinfI | GANTC | 7 cut(s) | 5, 41, 133, 191, 497, 535, 779 |
| HpaII | CCGG | 1 cut(s) | 287 |
| HphI | GGTGA | 5 cut(s) | 142, 383, 464, 484, 506 |
| Hpy166II | GTNNAC | 3 cut(s) | 37, 613, 764 |
| Hpy188I | TCNGA | 3 cut(s) | 53, 127, 385 |
| Hpy188III | TCNNGA | 4 cut(s) | 303, 347, 622, 776 |
| Hpy8I | GTNNAC | 3 cut(s) | 37, 613, 764 |
| Hpy99I | CGWCG | 2 cut(s) | 31, 275 |
| HpyAV | CCTTC | 1 cut(s) | 564 |
| HpyCH4III | ACNGT | 2 cut(s) | 27, 737 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 111, 591 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 3 cut(s) | 10, 126, 789 |
| Hsp92I | GRCGYC | 1 cut(s) | 85 |
| Hsp92II | CATG | 2 cut(s) | 145, 779 |
| HspAI | GCGC | 1 cut(s) | 85 |
| KasI | GGCGCC | 1 cut(s) | 84 |
| Ksp22I | TGATCA | 1 cut(s) | 634 |
| Kzo9I | GATC | 3 cut(s) | 389, 634, 744 |
| LmnI | GCTCC | 2 cut(s) | 124, 289 |
| Lsp1109I | GCAGC | 1 cut(s) | 103 |
| LweI | GCATC | 2 cut(s) | 204, 578 |
| MaeI | CTAG | 2 cut(s) | 293, 783 |
| MaeIII | GTNAC | 1 cut(s) | 731 |
| MalI | GATC | 3 cut(s) | 391, 636, 746 |
| MboI | GATC | 3 cut(s) | 389, 634, 744 |
| MboII | GAAGA | 5 cut(s) | 85, 350, 547, 656, 659 |
| MluCI | AATT | 4 cut(s) | 231, 275, 341, 464 |
| Mly113I | GGCGCC | 1 cut(s) | 85 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 9 cut(s) | 121, 184, 207, 247, 416, 601, 629, 784, 789 |
| MroXI | GAANNNNTTC | 1 cut(s) | 342 |
| MseI | TTAA | 3 cut(s) | 398, 516, 522 |
| MspI | CCGG | 1 cut(s) | 287 |
| MspR9I | CCNGG | 2 cut(s) | 81, 729 |
| Mva1269I | GAATGC | 1 cut(s) | 532 |
| MvaI | CCWGG | 2 cut(s) | 81, 729 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NarI | GGCGCC | 1 cut(s) | 85 |
| NdeI | CATATG | 1 cut(s) | 741 |
| NdeII | GATC | 3 cut(s) | 389, 634, 744 |
| NlaIII | CATG | 2 cut(s) | 145, 779 |
| NlaIV | GGNNCC | 2 cut(s) | 86, 106 |
| NmuCI | GTSAC | 1 cut(s) | 731 |
| PagI | TCATGA | 1 cut(s) | 775 |
| PctI | GAATGC | 1 cut(s) | 532 |
| PdmI | GAANNNNTTC | 1 cut(s) | 342 |
| PfeI | GAWTC | 6 cut(s) | 5, 133, 191, 497, 535, 779 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 177 |
| PkrI | GCNGC | 2 cut(s) | 118, 357 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PluTI | GGCGCC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| Psp6I | CCWGG | 2 cut(s) | 79, 727 |
| PspGI | CCWGG | 2 cut(s) | 79, 727 |
| PspN4I | GGNNCC | 2 cut(s) | 86, 106 |
| PspPI | GGNCC | 2 cut(s) | 504, 710 |
| SaqAI | TTAA | 3 cut(s) | 398, 516, 522 |
| SatI | GCNGC | 2 cut(s) | 117, 356 |
| Sau3AI | GATC | 3 cut(s) | 389, 634, 744 |
| Sau96I | GGNCC | 2 cut(s) | 504, 710 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 2 cut(s) | 81, 729 |
| SfaNI | GCATC | 2 cut(s) | 204, 578 |
| SfcI | CTRYAG | 1 cut(s) | 147 |
| SfoI | GGCGCC | 1 cut(s) | 86 |
| SinI | GGWCC | 2 cut(s) | 504, 710 |
| Sse9I | AATT | 4 cut(s) | 231, 275, 341, 464 |
| SsiI | CCGC | 3 cut(s) | 356, 530, 668 |
| SspDI | GGCGCC | 1 cut(s) | 84 |
| SspMI | CTAG | 2 cut(s) | 293, 783 |
| StyD4I | CCNGG | 2 cut(s) | 79, 727 |
| TaaI | ACNGT | 2 cut(s) | 27, 737 |
| TaqI | TCGA | 3 cut(s) | 225, 270, 697 |
| TasI | AATT | 4 cut(s) | 231, 275, 341, 464 |
| TauI | GCSGC | 1 cut(s) | 358 |
| TfiI | GAWTC | 6 cut(s) | 5, 133, 191, 497, 535, 779 |
| Tru1I | TTAA | 3 cut(s) | 398, 516, 522 |
| Tru9I | TTAA | 3 cut(s) | 398, 516, 522 |
| TscAI | CASTG | 3 cut(s) | 159, 322, 740 |
| TseFI | GTSAC | 1 cut(s) | 731 |
| TseI | GCWGC | 1 cut(s) | 116 |
| Tsp45I | GTSAC | 1 cut(s) | 731 |
| TspDTI | ATGAA | 3 cut(s) | 527, 764, 771 |
| TspGWI | ACGGA | 1 cut(s) | 578 |
| TspRI | CASTG | 3 cut(s) | 159, 322, 740 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 177 |
| VpaK11BI | GGWCC | 2 cut(s) | 504, 710 |
| XapI | RAATTY | 1 cut(s) | 341 |
| XmiI | GTMKAC | 1 cut(s) | 763 |
| XmnI | GAANNNNTTC | 1 cut(s) | 342 |
| XspI | CTAG | 2 cut(s) | 293, 783 |