Rroxscaffold_1G00021310

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000082
Physical Location & Seq
Reverse (-)
26119387 .. 26120535
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00021310.1

Sequence Viewer

Length: 1041 bp
ATGGATTTGAAACGTCCTATAAAAACCCGAAAGCCTCCCTCGCTCTCTTGTAGAGCGATGAAGCCAAAACTGATGGCGGATAACCTACCCGAAGATCTGATAGTTCAAATCCTGGAGAAGTTGCCGATCAAGTCCCTAATCCGCTTCACCTCCGTTTCGAAACGCTGGCGTCTCATCATATTGTCCGACCCCAACTTCGCCAAATCCCAATTCCAGCAAACCCGGAGTCGCAGAGTCCTCTGCCTCAACCGCAAAGAATCTGAATTCGAATCCTGGGACTTGGAGACACCGTGGTCCACCAGAGAAAGCTCTACTGACAGAAAGCTCAGCTGCCCATTCAAGCAGTCGAGCGATGAACTCTACTCACTCTCCTCCTGCAATGGTTTAGTATGTGCAGCTCTTTGTGATCAAAACCGGATTTCCACCAGCGACTACAAAGTTCTCATAGGCGACTACTTGTCATTGAATACTGACCCCCACATCTTCTCATCGAACACCAACATTTGGAAAAGTTTCAAATCCCCTTTCATTCTCCACAGGGACGATCAGTGGACTCTTTCAAATGAGGCACTTCATTTGGTTGCTTTGGTTGATAAGGAGATACTGGCTTTCGATTTAACACCTGAGAAATTCCGAACAATGCCGCTGCCTGACTCCGAACCGGGTCAGTATATCAGAGAGCTAGGGGACTTTAGAGGATGTCTGTGTGCATCTGATTATAAGAATCGACATATTGGCTTTATTGATTTGTGGATCATGAAAGAATATAACGTGGGTGAGTCCTGGACTAAGCTCTTTACCTTAAAGATTTCCGATCACCCTATGCTTGTATTTTATTCAAGGCCGATCAATCCGATCATGGTTATGGAAAGTAGTACAATTCTGGAGATAGGACTTTCTAATGAGGGTACGCATTTGGATACTGAGTTCAAGTTGATAAAGAGTTATCACAAGGAAGAGAAGTTTGAAACACGTAGGGTTAGCAGGAAGATGCATGGCAAAATTATTGGATATGAAGAGAGTCTACTATGGCTTGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

346

Amino Acids

40.23

Weight (kDa)

8.5

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 27 - 63 2.5e-08 F-box-like
F-box PF00646 28 - 66 2.3e-10 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 720
AasI GACNNNNNNGTC 1 cut(s) 292
AccB7I CCANNNNNTGG 1 cut(s) 504
AccI GTMKAC 1 cut(s) 1024
AciI CCGC 4 cut(s) 77, 142, 250, 644
AclWI GGATC 1 cut(s) 761
AcsI RAATTY 2 cut(s) 263, 629
AcyI GRCGYC 1 cut(s) 169
AfaI GTAC 2 cut(s) 877, 910
AfiI CCNNNNNNNGG 1 cut(s) 504
AflIII ACRYGT 1 cut(s) 971
AgsI TTSAA 9 cut(s) 10, 107, 340, 466, 517, 561, 840, 931, 968
AhdI GACNNNNNGTC 1 cut(s) 457
AjnI CCWGG 3 cut(s) 111, 272, 782
AjuI GAANNNNNNNTTGG 2 cut(s) 194, 226
AloI GAACNNNNNNTCC 2 cut(s) 911, 943
AluBI AGCT 6 cut(s) 309, 325, 330, 398, 682, 793
AluI AGCT 6 cut(s) 309, 325, 330, 398, 682, 793
Alw26I GTCTC 2 cut(s) 176, 278
AlwI GGATC 1 cut(s) 761
AoxI GGCC 1 cut(s) 842
ApeKI GCWGC 3 cut(s) 330, 395, 646
ApoI RAATTY 2 cut(s) 263, 629
ArsI GACNNNNNNTTYG 4 cut(s) 179, 211, 211, 243
Asp700I GAANNNNTTC 1 cut(s) 512
AspS9I GGNCC 1 cut(s) 294
AsuC2I CCSGG 2 cut(s) 223, 663
AsuHPI GGTGA 3 cut(s) 139, 788, 809
AsuII TTCGAA 2 cut(s) 158, 267
AvaII GGWCC 1 cut(s) 294
BarI GAAGNNNNNNTAC 2 cut(s) 1008, 1040
BbvI GCAGC 3 cut(s) 317, 407, 633
BccI CCATC 1 cut(s) 67
BciT130I CCWGG 3 cut(s) 113, 274, 784
BciVI GTATCC 1 cut(s) 913
BclI TGATCA 1 cut(s) 406
BcnI CCSGG 2 cut(s) 223, 663
BcoDI GTCTC 2 cut(s) 176, 278
BfaI CTAG 1 cut(s) 683
BfuI GTATCC 1 cut(s) 913
BglII AGATCT 1 cut(s) 94
BisI GCNGC 4 cut(s) 331, 396, 644, 647
BlpI GCTNAGC 1 cut(s) 326
BlsI GCNGC 4 cut(s) 332, 397, 645, 648
Bme1390I CCNGG 5 cut(s) 113, 223, 274, 663, 784
Bme18I GGWCC 1 cut(s) 294
BmeRI GACNNNNNGTC 1 cut(s) 457
BmgT120I GGNCC 1 cut(s) 294
BmrFI CCNGG 5 cut(s) 113, 223, 274, 663, 784
BmsI GCATC 2 cut(s) 719, 981
BpmI CTGGAG 2 cut(s) 134, 905
Bpu1102I GCTNAGC 1 cut(s) 326
Bpu14I TTCGAA 2 cut(s) 158, 267
BpuMI CCSGG 2 cut(s) 223, 663
BsaAI YACGTR 1 cut(s) 974
BsaHI GRCGYC 1 cut(s) 169
BsaJI CCNNGG 2 cut(s) 273, 290
BsaWI WCCGGW 1 cut(s) 414
BsaXI ACNNNNNCTCC 4 cut(s) 275, 305, 353, 383
Bsc4I CCNNNNNNNGG 1 cut(s) 504
Bse1I ACTGG 1 cut(s) 609
Bse3DI GCAATG 1 cut(s) 385
BseBI CCWGG 3 cut(s) 113, 274, 784
BseDI CCNNGG 2 cut(s) 273, 290
BseGI GGATG 1 cut(s) 704
BseLI CCNNNNNNNGG 1 cut(s) 504
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 3 cut(s) 340, 615, 915
BseNI ACTGG 1 cut(s) 609
BseRI GAGGAG 1 cut(s) 361
BseXI GCAGC 3 cut(s) 317, 407, 633
BsgI GTGCAG 1 cut(s) 414
BshFI GGCC 1 cut(s) 844
BsiSI CCGG 3 cut(s) 223, 415, 662
BslFI GGGAC 4 cut(s) 118, 290, 554, 701
BslI CCNNNNNNNGG 1 cut(s) 504
BsmAI GTCTC 2 cut(s) 176, 278
BsmBI CGTCTC 1 cut(s) 176
BsmFI GGGAC 4 cut(s) 118, 290, 554, 701
BsnI GGCC 1 cut(s) 844
Bsp119I TTCGAA 2 cut(s) 158, 267
Bsp143I GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
Bsp1720I GCTNAGC 1 cut(s) 326
BspACI CCGC 4 cut(s) 77, 142, 250, 644
BspANI GGCC 1 cut(s) 844
BspCNI CTCAG 3 cut(s) 339, 616, 916
BspHI TCATGA 1 cut(s) 756
BspPI GGATC 1 cut(s) 761
BspT104I TTCGAA 2 cut(s) 158, 267
BsrDI GCAATG 1 cut(s) 385
BsrI ACTGG 1 cut(s) 609
BssECI CCNNGG 2 cut(s) 273, 290
BssMI GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
BssNI GRCGYC 1 cut(s) 169
Bst2UI CCWGG 3 cut(s) 113, 274, 784
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 2 cut(s) 951, 1011
BstACI GRCGYC 1 cut(s) 169
BstBAI YACGTR 1 cut(s) 974
BstBI TTCGAA 2 cut(s) 158, 267
BstC8I GCNNGC 1 cut(s) 167
BstDEI CTNAG 4 cut(s) 326, 624, 789, 924
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 1 cut(s) 704
BstKTI GATC 8 cut(s) 97, 129, 409, 547, 756, 817, 849, 858
BstMAI GTCTC 2 cut(s) 176, 278
BstMBI GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
BstMWI GCNNNNNNNGC 2 cut(s) 40, 249
BstNI CCWGG 3 cut(s) 113, 274, 784
BstSCI CCNGG 5 cut(s) 111, 221, 272, 661, 782
BstV1I GCAGC 3 cut(s) 317, 407, 633
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 1 cut(s) 844
BtgI CCRYGG 1 cut(s) 290
BtgZI GCGATG 2 cut(s) 71, 366
BtsCI GGATG 1 cut(s) 704
BtsIMutI CAGTG 1 cut(s) 554
Cac8I GCNNGC 1 cut(s) 167
CciI TCATGA 1 cut(s) 756
Cfr13I GGNCC 1 cut(s) 294
CseI GACGC 1 cut(s) 158
Csp6I GTAC 2 cut(s) 876, 909
CviAII CATG 3 cut(s) 757, 859, 995
CviQI GTAC 2 cut(s) 876, 909
DdeI CTNAG 4 cut(s) 326, 624, 789, 924
DpnI GATC 8 cut(s) 96, 128, 408, 546, 755, 816, 848, 857
DpnII GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
DrdI GACNNNNNNGTC 1 cut(s) 292
DriI GACNNNNNGTC 1 cut(s) 457
DseDI GACNNNNNNGTC 1 cut(s) 292
Eam1104I CTCTTC 2 cut(s) 951, 1011
Eam1105I GACNNNNNGTC 1 cut(s) 457
EarI CTCTTC 2 cut(s) 951, 1011
EciI GGCGGA 1 cut(s) 92
Eco47I GGWCC 1 cut(s) 294
EcoRI GAATTC 1 cut(s) 263
EcoRII CCWGG 3 cut(s) 111, 272, 782
EcoT22I ATGCAT 1 cut(s) 996
Esp3I CGTCTC 1 cut(s) 176
FaeI CATG 3 cut(s) 760, 862, 998
FaqI GGGAC 4 cut(s) 118, 290, 554, 701
FatI CATG 3 cut(s) 756, 858, 994
FbaI TGATCA 1 cut(s) 406
FblI GTMKAC 1 cut(s) 1024
Fnu4HI GCNGC 4 cut(s) 331, 396, 644, 647
FokI GGATG 1 cut(s) 711
Fsp4HI GCNGC 4 cut(s) 331, 396, 644, 647
FspBI CTAG 1 cut(s) 683
GluI GCNGC 4 cut(s) 331, 396, 644, 647
GsuI CTGGAG 2 cut(s) 134, 905
HaeIII GGCC 1 cut(s) 844
HapII CCGG 3 cut(s) 223, 415, 662
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 169
Hin1II CATG 3 cut(s) 760, 862, 998
HinfI GANTC 9 cut(s) 226, 234, 257, 269, 553, 653, 724, 779, 1021
HpaII CCGG 3 cut(s) 223, 415, 662
HphI GGTGA 3 cut(s) 139, 788, 809
Hpy166II GTNNAC 3 cut(s) 297, 552, 1025
Hpy188I TCNGA 9 cut(s) 99, 187, 262, 635, 658, 677, 715, 814, 855
Hpy188III TCNNGA 2 cut(s) 757, 884
Hpy8I GTNNAC 3 cut(s) 297, 552, 1025
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 3 cut(s) 13, 771, 973
HpyCH4V TGCA 4 cut(s) 378, 395, 710, 994
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 249
HpyF3I CTNAG 4 cut(s) 326, 624, 789, 924
HpySE526I ACGT 3 cut(s) 13, 771, 973
Hsp92I GRCGYC 1 cut(s) 169
Hsp92II CATG 3 cut(s) 760, 862, 998
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
Lsp1109I GCAGC 3 cut(s) 317, 407, 633
LweI GCATC 2 cut(s) 719, 981
MaeI CTAG 1 cut(s) 683
MaeII ACGT 3 cut(s) 13, 771, 973
MalI GATC 8 cut(s) 96, 128, 408, 546, 755, 816, 848, 857
MboI GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
MboII GAAGA 5 cut(s) 104, 475, 968, 1000, 1028
MflI RGATCY 1 cut(s) 94
MluCI AATT 5 cut(s) 209, 263, 629, 879, 1002
MlyI GAGTC 6 cut(s) 235, 243, 547, 647, 788, 1030
MmeI TCCRAC 1 cut(s) 210
MnlI CCTC 9 cut(s) 45, 49, 160, 248, 254, 382, 559, 689, 898
Mph1103I ATGCAT 1 cut(s) 996
MroXI GAANNNNTTC 1 cut(s) 512
MseI TTAA 2 cut(s) 617, 803
MslI CAYNNNNRTG 1 cut(s) 863
MspA1I CMGCKG 2 cut(s) 330, 646
MspI CCGG 3 cut(s) 223, 415, 662
MspR9I CCNGG 5 cut(s) 113, 223, 274, 663, 784
MvaI CCWGG 3 cut(s) 113, 274, 784
MwoI GCNNNNNNNGC 2 cut(s) 40, 249
NciI CCSGG 2 cut(s) 223, 663
NdeII GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
NlaIII CATG 3 cut(s) 760, 862, 998
NsiI ATGCAT 1 cut(s) 996
NspV TTCGAA 2 cut(s) 158, 267
PagI TCATGA 1 cut(s) 756
PdmI GAANNNNTTC 1 cut(s) 512
PfeI GAWTC 3 cut(s) 257, 269, 724
PflMI CCANNNNNTGG 1 cut(s) 504
PfoI TCCNGGA 2 cut(s) 111, 782
PkrI GCNGC 4 cut(s) 332, 397, 645, 648
PleI GAGTC 6 cut(s) 234, 242, 547, 647, 787, 1029
PpsI GAGTC 6 cut(s) 234, 242, 547, 647, 787, 1029
Ppu21I YACGTR 1 cut(s) 974
PsiI TTATAA 1 cut(s) 720
Psp6I CCWGG 3 cut(s) 111, 272, 782
PspGI CCWGG 3 cut(s) 111, 272, 782
PspPI GGNCC 1 cut(s) 294
PsuI RGATCY 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 330
RsaI GTAC 2 cut(s) 877, 910
RsaNI GTAC 2 cut(s) 876, 909
RseI CAYNNNNRTG 1 cut(s) 863
SaqAI TTAA 2 cut(s) 617, 803
SatI GCNGC 4 cut(s) 331, 396, 644, 647
Sau3AI GATC 8 cut(s) 94, 126, 406, 544, 753, 814, 846, 855
Sau96I GGNCC 1 cut(s) 294
SchI GAGTC 6 cut(s) 235, 243, 547, 647, 788, 1030
ScrFI CCNGG 5 cut(s) 113, 223, 274, 663, 784
SfaNI GCATC 2 cut(s) 719, 981
SfuI TTCGAA 2 cut(s) 158, 267
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 1 cut(s) 863
Sse9I AATT 5 cut(s) 209, 263, 629, 879, 1002
SsiI CCGC 4 cut(s) 77, 142, 250, 644
SspMI CTAG 1 cut(s) 683
StyD4I CCNGG 5 cut(s) 111, 221, 272, 661, 782
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 3 cut(s) 16, 774, 976
TaqI TCGA 6 cut(s) 158, 267, 347, 491, 612, 727
TasI AATT 5 cut(s) 209, 263, 629, 879, 1002
TatI WGTACW 1 cut(s) 875
TauI GCSGC 1 cut(s) 646
TfiI GAWTC 3 cut(s) 257, 269, 724
Tru1I TTAA 2 cut(s) 617, 803
Tru9I TTAA 2 cut(s) 617, 803
TscAI CASTG 1 cut(s) 554
TseI GCWGC 3 cut(s) 330, 395, 646
TspDTI ATGAA 6 cut(s) 74, 369, 517, 563, 773, 1029
TspGWI ACGGA 1 cut(s) 142
TspRI CASTG 1 cut(s) 554
Van91I CCANNNNNTGG 1 cut(s) 504
VpaK11BI GGWCC 1 cut(s) 294
XapI RAATTY 2 cut(s) 263, 629
XmiI GTMKAC 1 cut(s) 1024
XmnI GAANNNNTTC 1 cut(s) 512
XspI CTAG 1 cut(s) 683
Zsp2I ATGCAT 1 cut(s) 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.