Rorug02G0147800

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Reverse (-)
12962314 .. 12965410
3097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0147800.1

Sequence Viewer

Length: 1674 bp
ATGGTTTCTGAAGACTTCAACGAGCCAGAGACTCCAACCTTATCTCCTCGACGCACATGTCATTCTCCTTCTCCCTTAAAAGCCCCTGTGGGACGAAGAAGAGTTTGGCGCAATAGTGAGCAAACGAGAAGTAAAATGAAGTGCCCGTACTGCTCGGCCGGACAAGGCCGTTGTGCGACAACAACCTCCCGTCGTTCAATCACGGAGTGCACCTCCTGCGGGCGCGTGGTGGAAGAGCGCCAAACCCAATTCCACCACCTCTTCCACCTACGCGCCCAAGACAACCCTCTCTGCCTCGTCACCTCCGACCTCCCAACCCCTCCTCCGCCACCCCAAAACGACGACGTCGAAGACCCGTTCGAGCCCACGGGATTCATCACCGCCTTCTCCACCTGGTCCCTCGAGCCCAGCCCACTCTACCTCCGCTCCTCCCTCTCCTTCTCCGGCCACCTCGCCGAGCTCGAGCGCGTGCTCGAACTGTCCTCCGCCTCCGCCACCTCCTCCACCGTCGTGGTCGACAATCTCAGGGCGTATATGCAGATCATCGACGTGGCTTCGATTTTGGGATTGGATTATGACATTTCGGACCACGCGTTTCAGTTGTTCAGGGATTGTTGCTCCACTACTTGCTTGAGGAATCGGAGCGTTGAAGCCCTAGCTACTGCTGCTCTCGTCCAGGCCATTAGGGAGGCCCAAGAACCCAGAACCCTTCAGGAGATCTCAATTGCAGCTAATGTAGCGCAGAAGGAAATTGGTAAGTACATCAAGATACTTGGGGAAGCGCTTCAACTAAGTCAGCCTATCAACAGCAATTCCATATCGGTCCACATGCCGAGGTTTTGCACTCTCCTCCAGCTAAATACGTCTGCTCAGAAACTTGCAACTCATATTGGAGAGGTTGTTATCAACAAATGCTTCTGCACTCGCAGAAACCCCATTAGCATCTCTGCGGCTGCTATATATTTAGCCTGCCAGCTTGAAGACAAGCGAAAAACTCAGGCAGAGATTTGTAAGGTGACTGGTCTTACCGAAGTCACTCTCCGGAAAGTCTACAAGGAACTCTTGGAAAATTGGGATGATTTACTCCCATCTAATTATACTCCGGCTGTTCCTCCAGAAAGAGCATTTCCTACTACTGTAATTGCTTCAGGACGATCTTCAGCACCGAAAGCTGATTTACCTGAACTACCAGTTTTTTTGAACAGAGAGAGGCAGCCGGAGATAAAACCTGACAAACCAGAGGGATTAGATATGAACGTTGAGCCAACCGAAGAAGAGGATTTTGACAGTACAGTTAATTCTCGAGTTTCACAGTCACCAGTGGTGAACCTTTCAACACTTTTGTGGCAATCCCAGGTTCCATTTGGTACTTCTGGAAGTGCAGCAGTACTAAAGTCACAGAATATTGCCGTAGCAATGGACATCGATACGCCACAGAGTAACCAACACCTCGAGCACAAGTTGGACAAGGACACAAAGGGTTCTACTGGTAATCGAAATCCAACTTCAAGTTCGAGTTCACTTGCCAGGCAGTTTCGATACCCACCTTCCTCAGGTTCCTCTCCAAATGTTCAATATTCGCTTCCTCCAAAGCTTGGACCAGGTTACACTGAGCTTAGAGGTAGCAGGGGTCAAAATGGAAGTGAAAATTCCAAACAGAGTGGGGATGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

557

Amino Acids

61.29

Weight (kDa)

6.26

Isoelectric Point (pI)

65.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIIB PF00382 177 - 258 3e-10 Transcription factor TFIIB repeat
TFIIB PF00382 275 - 356 3.4e-16 Transcription factor TFIIB repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 57
AatII GACGTC 1 cut(s) 348
AccB7I CCANNNNNTGG 1 cut(s) 1595
AccBSI CCGCTC 1 cut(s) 426
AccI GTMKAC 2 cut(s) 516, 1050
AccII CGCG 4 cut(s) 225, 273, 468, 593
AccIII TCCGGA 1 cut(s) 1041
AciI CCGC 7 cut(s) 219, 326, 381, 424, 486, 492, 950
AclI AACGTT 1 cut(s) 1257
AcoI YGGCCR 2 cut(s) 156, 445
AcsI RAATTY 1 cut(s) 1648
AcuI CTGAAG 4 cut(s) 30, 695, 1131, 1143
AcyI GRCGYC 1 cut(s) 345
AdeI CACNNNGTG 1 cut(s) 207
AfaI GTAC 5 cut(s) 149, 761, 1291, 1369, 1389
AfeI AGCGCT 1 cut(s) 783
AfiI CCNNNNNNNGG 3 cut(s) 219, 1553, 1595
AflIII ACRYGT 2 cut(s) 56, 591
AgsI TTSAA 9 cut(s) 19, 198, 650, 788, 980, 1201, 1335, 1509, 1574
AjiI CACGTC 1 cut(s) 550
AjnI CCWGG 5 cut(s) 392, 675, 1353, 1526, 1600
AjuI GAANNNNNNNTTGG 4 cut(s) 88, 120, 1495, 1527
AleI CACNNNNGTG 2 cut(s) 509, 1342
AluBI AGCT 8 cut(s) 460, 659, 731, 856, 976, 1172, 1594, 1615
AluI AGCT 8 cut(s) 460, 659, 731, 856, 976, 1172, 1594, 1615
Alw21I GWGCWC 4 cut(s) 212, 462, 474, 1458
Alw26I GTCTC 1 cut(s) 23
Alw44I GTGCAC 1 cut(s) 208
Ama87I CYCGRG 4 cut(s) 401, 461, 1302, 1451
Aor13HI TCCGGA 1 cut(s) 1041
Aor51HI AGCGCT 1 cut(s) 783
AoxI GGCC 5 cut(s) 156, 166, 445, 678, 690
ApaLI GTGCAC 1 cut(s) 208
ApeKI GCWGC 5 cut(s) 665, 728, 953, 1213, 1382
ApoI RAATTY 1 cut(s) 1648
Asp700I GAANNNNTTC 1 cut(s) 783
AspLEI GCGC 7 cut(s) 111, 225, 240, 275, 468, 742, 784
AspS9I GGNCC 5 cut(s) 396, 586, 691, 823, 1598
AsuHPI GGTGA 5 cut(s) 292, 370, 1027, 1308, 1336
AvaI CYCGRG 4 cut(s) 401, 461, 1302, 1451
AvaII GGWCC 4 cut(s) 396, 586, 823, 1598
AxyI CCTNAGG 1 cut(s) 1552
BaeGI GKGCMC 2 cut(s) 146, 212
BanII GRGCYC 3 cut(s) 366, 408, 462
BarI GAAGNNNNNNTAC 2 cut(s) 131, 163
BbsI GAAGAC 3 cut(s) 18, 357, 987
Bbv12I GWGCWC 4 cut(s) 212, 462, 474, 1458
BbvI GCAGC 5 cut(s) 652, 740, 940, 1225, 1394
BccI CCATC 1 cut(s) 1096
BceAI ACGGC 2 cut(s) 153, 1394
BciT130I CCWGG 5 cut(s) 394, 677, 1355, 1528, 1602
BcoDI GTCTC 1 cut(s) 23
BfaI CTAG 1 cut(s) 656
BfoI RGCGCY 2 cut(s) 241, 785
BglII AGATCT 1 cut(s) 717
BisI GCNGC 6 cut(s) 666, 729, 951, 954, 1214, 1383
BlsI GCNGC 6 cut(s) 667, 730, 952, 955, 1215, 1384
BmcAI AGTACT 1 cut(s) 1389
Bme1390I CCNGG 5 cut(s) 394, 677, 1355, 1528, 1602
Bme18I GGWCC 4 cut(s) 396, 586, 823, 1598
BmeT110I CYCGRG 4 cut(s) 401, 461, 1302, 1451
BmgBI CACGTC 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 396, 586, 691, 823, 1598
BmiI GGNNCC 3 cut(s) 398, 1359, 1558
BmrFI CCNGG 5 cut(s) 394, 677, 1355, 1528, 1602
BmsI GCATC 2 cut(s) 951, 1657
BpiI GAAGAC 3 cut(s) 18, 357, 987
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 2 cut(s) 836, 1098
BpuEI CTTGAG 1 cut(s) 652
Bsa29I ATCGAT 1 cut(s) 1425
BsaHI GRCGYC 1 cut(s) 345
BsaJI CCNNGG 3 cut(s) 366, 833, 1353
BsaWI WCCGGW 1 cut(s) 1041
Bsc4I CCNNNNNNNGG 3 cut(s) 219, 1553, 1595
Bse1I ACTGG 4 cut(s) 1024, 1190, 1319, 1492
Bse21I CCTNAGG 1 cut(s) 1552
Bse3DI GCAATG 1 cut(s) 1422
BseAI TCCGGA 1 cut(s) 1041
BseBI CCWGG 5 cut(s) 394, 677, 1355, 1528, 1602
BseCI ATCGAT 1 cut(s) 1425
BseDI CCNNGG 3 cut(s) 366, 833, 1353
BseGI GGATG 2 cut(s) 1081, 1672
BseLI CCNNNNNNNGG 3 cut(s) 219, 1553, 1595
BseMI GCAATG 1 cut(s) 1422
BseMII CTCAG 5 cut(s) 538, 884, 1010, 1566, 1602
BseNI ACTGG 4 cut(s) 1024, 1190, 1319, 1492
BseRI GAGGAG 5 cut(s) 36, 312, 418, 490, 839
BseSI GKGCMC 2 cut(s) 146, 212
BseX3I CGGCCG 1 cut(s) 156
BseXI GCAGC 5 cut(s) 652, 740, 940, 1225, 1394
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 2 cut(s) 904, 1401
Bsh1236I CGCG 4 cut(s) 225, 273, 468, 593
Bsh1285I CGRYCG 1 cut(s) 159
BshFI GGCC 5 cut(s) 158, 168, 447, 680, 692
BshVI ATCGAT 1 cut(s) 1425
BsiEI CGRYCG 1 cut(s) 159
BsiHKAI GWGCWC 4 cut(s) 212, 462, 474, 1458
BsiHKCI CYCGRG 4 cut(s) 401, 461, 1302, 1451
BsiSI CCGG 5 cut(s) 159, 444, 1042, 1103, 1217
BslFI GGGAC 2 cut(s) 105, 382
BslI CCNNNNNNNGG 3 cut(s) 219, 1553, 1595
BsmAI GTCTC 1 cut(s) 23
BsmFI GGGAC 2 cut(s) 105, 382
BsnI GGCC 5 cut(s) 158, 168, 447, 680, 692
BsoBI CYCGRG 4 cut(s) 401, 461, 1302, 1451
Bsp1286I GDGCHC 7 cut(s) 146, 212, 366, 408, 462, 474, 1458
Bsp13I TCCGGA 1 cut(s) 1041
Bsp143I GATC 3 cut(s) 540, 717, 1154
BspACI CCGC 7 cut(s) 219, 326, 381, 424, 486, 492, 950
BspANI GGCC 5 cut(s) 158, 168, 447, 680, 692
BspCNI CTCAG 5 cut(s) 537, 883, 1009, 1565, 1603
BspDI ATCGAT 1 cut(s) 1425
BspEI TCCGGA 1 cut(s) 1041
BspFNI CGCG 4 cut(s) 225, 273, 468, 593
BspLI GGNNCC 3 cut(s) 398, 1359, 1558
BspQI GCTCTTC 1 cut(s) 228
BsrBI CCGCTC 1 cut(s) 426
BsrDI GCAATG 1 cut(s) 1422
BsrI ACTGG 4 cut(s) 1024, 1190, 1319, 1492
BssECI CCNNGG 3 cut(s) 366, 833, 1353
BssMI GATC 3 cut(s) 540, 717, 1154
BssNI GRCGYC 1 cut(s) 345
Bst2UI CCWGG 5 cut(s) 394, 677, 1355, 1528, 1602
Bst4CI ACNGT 6 cut(s) 480, 508, 1138, 1289, 1294, 1314
Bst6I CTCTTC 4 cut(s) 94, 228, 266, 1269
BstACI GRCGYC 1 cut(s) 345
BstAPI GCANNNNNTGC 1 cut(s) 216
BstC8I GCNNGC 4 cut(s) 221, 470, 970, 974
BstDEI CTNAG 7 cut(s) 524, 791, 870, 996, 1552, 1611, 1616
BstDSI CCRYGG 1 cut(s) 366
BstENI CCTNNNNNAGG 1 cut(s) 1551
BstF5I GGATG 2 cut(s) 1081, 1672
BstFNI CGCG 4 cut(s) 225, 273, 468, 593
BstH2I RGCGCY 2 cut(s) 241, 785
BstHHI GCGC 7 cut(s) 111, 225, 240, 275, 468, 742, 784
BstKTI GATC 3 cut(s) 543, 720, 1157
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 3 cut(s) 540, 717, 1154
BstMCI CGRYCG 1 cut(s) 159
BstMWI GCNNNNNNNGC 5 cut(s) 150, 216, 665, 737, 1169
BstNI CCWGG 5 cut(s) 394, 677, 1355, 1528, 1602
BstNSI RCATGY 2 cut(s) 60, 832
BstSCI CCNGG 5 cut(s) 392, 675, 1353, 1526, 1600
BstSLI GKGCMC 2 cut(s) 146, 212
BstUI CGCG 4 cut(s) 225, 273, 468, 593
BstV1I GCAGC 5 cut(s) 652, 740, 940, 1225, 1394
BstV2I GAAGAC 3 cut(s) 18, 357, 987
BstX2I RGATCY 1 cut(s) 717
BstXI CCANNNNNNTGG 1 cut(s) 511
BstYI RGATCY 1 cut(s) 717
BstZI CGGCCG 1 cut(s) 156
Bsu15I ATCGAT 1 cut(s) 1425
Bsu36I CCTNAGG 1 cut(s) 1552
BsuRI GGCC 5 cut(s) 158, 168, 447, 680, 692
BsuTUI ATCGAT 1 cut(s) 1425
BtgI CCRYGG 1 cut(s) 366
BtrI CACGTC 1 cut(s) 550
BtsCI GGATG 2 cut(s) 1081, 1672
BtsIMutI CAGTG 2 cut(s) 1326, 1608
Cac8I GCNNGC 4 cut(s) 221, 470, 970, 974
CfoI GCGC 7 cut(s) 111, 225, 240, 275, 468, 742, 784
Cfr13I GGNCC 5 cut(s) 396, 586, 691, 823, 1598
ClaI ATCGAT 1 cut(s) 1425
CseI GACGC 1 cut(s) 60
CsiI ACCWGGT 2 cut(s) 392, 1600
Csp6I GTAC 5 cut(s) 148, 760, 1290, 1368, 1388
CspCI CAANNNNNGTGG 1 cut(s) 1642
CviAII CATG 2 cut(s) 57, 829
CviQI GTAC 5 cut(s) 148, 760, 1290, 1368, 1388
DdeI CTNAG 7 cut(s) 524, 791, 870, 996, 1552, 1611, 1616
DpnI GATC 3 cut(s) 542, 719, 1156
DpnII GATC 3 cut(s) 540, 717, 1154
DraIII CACNNNGTG 1 cut(s) 207
DrdI GACNNNNNNGTC 1 cut(s) 57
DseDI GACNNNNNNGTC 1 cut(s) 57
EaeI YGGCCR 2 cut(s) 156, 445
EagI CGGCCG 1 cut(s) 156
Eam1104I CTCTTC 4 cut(s) 94, 228, 266, 1269
EarI CTCTTC 4 cut(s) 94, 228, 266, 1269
EciI GGCGGA 3 cut(s) 315, 475, 481
Ecl136II GAGCTC 1 cut(s) 460
EclXI CGGCCG 1 cut(s) 156
Eco24I GRGCYC 3 cut(s) 366, 408, 462
Eco47I GGWCC 4 cut(s) 396, 586, 823, 1598
Eco47III AGCGCT 1 cut(s) 783
Eco52I CGGCCG 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 4 cut(s) 30, 695, 1131, 1143
Eco81I CCTNAGG 1 cut(s) 1552
Eco88I CYCGRG 4 cut(s) 401, 461, 1302, 1451
EcoICRI GAGCTC 1 cut(s) 460
EcoNI CCTNNNNNAGG 1 cut(s) 1551
EcoRII CCWGG 5 cut(s) 392, 675, 1353, 1526, 1600
EcoT38I GRGCYC 3 cut(s) 366, 408, 462
FaeI CATG 2 cut(s) 60, 832
FalI AAGNNNNNCTT 2 cut(s) 1046, 1078
FaqI GGGAC 2 cut(s) 105, 382
FatI CATG 2 cut(s) 56, 828
FauI CCCGC 1 cut(s) 212
FblI GTMKAC 2 cut(s) 516, 1050
Fnu4HI GCNGC 6 cut(s) 666, 729, 951, 954, 1214, 1383
FokI GGATG 1 cut(s) 1088
FriOI GRGCYC 3 cut(s) 366, 408, 462
Fsp4HI GCNGC 6 cut(s) 666, 729, 951, 954, 1214, 1383
FspBI CTAG 1 cut(s) 656
GlaI GCGC 7 cut(s) 110, 224, 239, 274, 467, 741, 783
GluI GCNGC 6 cut(s) 666, 729, 951, 954, 1214, 1383
GsaI CCCAGC 1 cut(s) 411
GsuI CTGGAG 2 cut(s) 836, 1098
HaeII RGCGCY 2 cut(s) 241, 785
HaeIII GGCC 5 cut(s) 158, 168, 447, 680, 692
HapII CCGG 5 cut(s) 159, 444, 1042, 1103, 1217
HgaI GACGC 1 cut(s) 60
HhaI GCGC 7 cut(s) 111, 225, 240, 275, 468, 742, 784
Hin1I GRCGYC 1 cut(s) 345
Hin1II CATG 2 cut(s) 60, 832
Hin6I GCGC 7 cut(s) 109, 223, 238, 273, 466, 740, 782
HinP1I GCGC 7 cut(s) 109, 223, 238, 273, 466, 740, 782
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HindIII AAGCTT 1 cut(s) 1592
HinfI GANTC 3 cut(s) 31, 372, 637
HpaII CCGG 5 cut(s) 159, 444, 1042, 1103, 1217
HphI GGTGA 5 cut(s) 292, 370, 1027, 1308, 1336
Hpy166II GTNNAC 6 cut(s) 210, 517, 826, 1051, 1327, 1520
Hpy188I TCNGA 5 cut(s) 10, 307, 586, 642, 873
Hpy188III TCNNGA 7 cut(s) 713, 766, 1042, 1115, 1149, 1302, 1374
Hpy8I GTNNAC 6 cut(s) 210, 517, 826, 1051, 1327, 1520
Hpy99I CGWCG 7 cut(s) 54, 195, 344, 347, 350, 512, 551
HpyAV CCTTC 6 cut(s) 78, 394, 448, 719, 739, 1557
HpyCH4III ACNGT 6 cut(s) 480, 508, 1138, 1289, 1294, 1314
HpyCH4IV ACGT 4 cut(s) 345, 549, 863, 1257
HpyCH4V TGCA 7 cut(s) 210, 538, 728, 843, 881, 921, 1382
HpyF10VI GCNNNNNNNGC 5 cut(s) 150, 216, 665, 737, 1169
HpyF3I CTNAG 7 cut(s) 524, 791, 870, 996, 1552, 1611, 1616
HpySE526I ACGT 4 cut(s) 345, 549, 863, 1257
Hsp92I GRCGYC 1 cut(s) 345
Hsp92II CATG 2 cut(s) 60, 832
HspAI GCGC 7 cut(s) 109, 223, 238, 273, 466, 740, 782
Kpn2I TCCGGA 1 cut(s) 1041
Kzo9I GATC 3 cut(s) 540, 717, 1154
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 3 cut(s) 431, 623, 642
Lsp1109I GCAGC 5 cut(s) 652, 740, 940, 1225, 1394
LweI GCATC 2 cut(s) 951, 1657
MabI ACCWGGT 2 cut(s) 392, 1600
MaeI CTAG 1 cut(s) 656
MaeII ACGT 4 cut(s) 345, 549, 863, 1257
MaeIII GTNAC 7 cut(s) 298, 1015, 1033, 1314, 1395, 1439, 1604
MalI GATC 3 cut(s) 542, 719, 1156
MbiI CCGCTC 1 cut(s) 426
MboI GATC 3 cut(s) 540, 717, 1154
MfeI CAATTG 1 cut(s) 723
MflI RGATCY 1 cut(s) 717
MhlI GDGCHC 7 cut(s) 146, 212, 366, 408, 462, 474, 1458
MluCI AATT 9 cut(s) 248, 723, 750, 811, 1069, 1093, 1140, 1297, 1648
MluI ACGCGT 1 cut(s) 591
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 4 cut(s) 59, 330, 1443, 1526
MroI TCCGGA 1 cut(s) 1041
MroXI GAANNNNTTC 1 cut(s) 783
MseI TTAA 2 cut(s) 77, 1296
MslI CAYNNNNRTG 3 cut(s) 509, 548, 1342
MspI CCGG 5 cut(s) 159, 444, 1042, 1103, 1217
MspR9I CCNGG 5 cut(s) 394, 677, 1355, 1528, 1602
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 5 cut(s) 394, 677, 1355, 1528, 1602
MvnI CGCG 4 cut(s) 225, 273, 468, 593
MwoI GCNNNNNNNGC 5 cut(s) 150, 216, 665, 737, 1169
NdeII GATC 3 cut(s) 540, 717, 1154
NlaIII CATG 2 cut(s) 60, 832
NlaIV GGNNCC 3 cut(s) 398, 1359, 1558
NmeAIII GCCGAG 3 cut(s) 134, 481, 858
NmuCI GTSAC 5 cut(s) 298, 1015, 1033, 1314, 1395
NspI RCATGY 2 cut(s) 60, 832
OliI CACNNNNGTG 2 cut(s) 509, 1342
PaeR7I CTCGAG 4 cut(s) 401, 461, 1302, 1451
PciI ACATGT 1 cut(s) 56
PciSI GCTCTTC 1 cut(s) 228
PcsI WCGNNNNNNNCGW 4 cut(s) 303, 345, 459, 590
PdmI GAANNNNTTC 1 cut(s) 783
PfeI GAWTC 2 cut(s) 372, 637
PflFI GACNNNGTC 1 cut(s) 344
PflMI CCANNNNNTGG 1 cut(s) 1595
PkrI GCNGC 6 cut(s) 667, 730, 952, 955, 1215, 1384
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PscI ACATGT 1 cut(s) 56
Psp124BI GAGCTC 1 cut(s) 462
Psp1406I AACGTT 1 cut(s) 1257
Psp6I CCWGG 5 cut(s) 392, 675, 1353, 1526, 1600
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 5 cut(s) 392, 675, 1353, 1526, 1600
PspN4I GGNNCC 3 cut(s) 398, 1359, 1558
PspPI GGNCC 5 cut(s) 396, 586, 691, 823, 1598
PspXI VCTCGAGB 3 cut(s) 401, 461, 1451
PsuI RGATCY 1 cut(s) 717
PsyI GACNNNGTC 1 cut(s) 344
RsaI GTAC 5 cut(s) 149, 761, 1291, 1369, 1389
RsaNI GTAC 5 cut(s) 148, 760, 1290, 1368, 1388
RseI CAYNNNNRTG 3 cut(s) 509, 548, 1342
SacI GAGCTC 1 cut(s) 462
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 228
SaqAI TTAA 2 cut(s) 77, 1296
SatI GCNGC 6 cut(s) 666, 729, 951, 954, 1214, 1383
Sau3AI GATC 3 cut(s) 540, 717, 1154
Sau96I GGNCC 5 cut(s) 396, 586, 691, 823, 1598
ScaI AGTACT 1 cut(s) 1389
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 5 cut(s) 394, 677, 1355, 1528, 1602
SduI GDGCHC 7 cut(s) 146, 212, 366, 408, 462, 474, 1458
SexAI ACCWGGT 2 cut(s) 392, 1600
SfaNI GCATC 2 cut(s) 951, 1657
Sfr274I CTCGAG 4 cut(s) 401, 461, 1302, 1451
SinI GGWCC 4 cut(s) 396, 586, 823, 1598
SlaI CTCGAG 4 cut(s) 401, 461, 1302, 1451
SmiMI CAYNNNNRTG 3 cut(s) 509, 548, 1342
SmlI CTYRAG 5 cut(s) 401, 461, 631, 1302, 1451
SmoI CTYRAG 5 cut(s) 401, 461, 631, 1302, 1451
Sse9I AATT 9 cut(s) 248, 723, 750, 811, 1069, 1093, 1140, 1297, 1648
SsiI CCGC 7 cut(s) 219, 326, 381, 424, 486, 492, 950
SspI AATATT 2 cut(s) 1405, 1577
SspMI CTAG 1 cut(s) 656
SstI GAGCTC 1 cut(s) 462
StyD4I CCNGG 5 cut(s) 392, 675, 1353, 1526, 1600
TaaI ACNGT 6 cut(s) 480, 508, 1138, 1289, 1294, 1314
TaiI ACGT 4 cut(s) 348, 552, 866, 1260
TaqII GACCGA 1 cut(s) 811
TasI AATT 9 cut(s) 248, 723, 750, 811, 1069, 1093, 1140, 1297, 1648
TatI WGTACW 3 cut(s) 759, 1289, 1387
TauI GCSGC 1 cut(s) 953
TfiI GAWTC 2 cut(s) 372, 637
Tru1I TTAA 2 cut(s) 77, 1296
Tru9I TTAA 2 cut(s) 77, 1296
TscAI CASTG 2 cut(s) 1326, 1615
TseFI GTSAC 5 cut(s) 298, 1015, 1033, 1314, 1395
TseI GCWGC 5 cut(s) 665, 728, 953, 1213, 1382
Tsp45I GTSAC 5 cut(s) 298, 1015, 1033, 1314, 1395
TspDTI ATGAA 3 cut(s) 152, 364, 1268
TspGWI ACGGA 1 cut(s) 218
TspRI CASTG 2 cut(s) 1326, 1615
Tth111I GACNNNGTC 1 cut(s) 344
Van91I CCANNNNNTGG 1 cut(s) 1595
VneI GTGCAC 1 cut(s) 208
VpaK11BI GGWCC 4 cut(s) 396, 586, 823, 1598
XagI CCTNNNNNAGG 1 cut(s) 1551
XapI RAATTY 1 cut(s) 1648
XceI RCATGY 2 cut(s) 60, 832
XcmI CCANNNNNNNNNTGG 1 cut(s) 1361
XhoI CTCGAG 4 cut(s) 401, 461, 1302, 1451
XmiI GTMKAC 2 cut(s) 516, 1050
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 1 cut(s) 656
ZraI GACGTC 1 cut(s) 346
ZrmI AGTACT 1 cut(s) 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.