Rw5G036390

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000082
Physical Location & Seq
Forward (+)
63870378 .. 63872024
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G036390.1

Sequence Viewer

Length: 1086 bp
ATGGCGGATCACTTACCGGAACATGTGATAGTTCAAATCCTGGAGAGGTTGCCGACTAAATCCCTAATCCGCTTCACCTCCGTTTCAAAACGCTGGCGCTTCATCATACTGTCCGACCCACAGTTCGCCAAGTCCCAATTCCAAATCGGTTCTCACTGCCAGACCCTCCGTCACAGGCTCCTCATCTCCTCCGCCTCCCGATCTGGATTCAAGTCACTGGACTTGGATGCGCCGCCTCCGCCGTCGCAGTCGCCTTTGGGAGACATTTATTCGGTTAGGTGCTCATTGGGGCAACAACCGGGGGGACGTCCTATCAGAATACTGTGCTCCTGCAATGGTTTGGTACTTGCAACTCTTCAGGATCAAGAAAACAACATGTATATCTGGAACCCATCAACTCAATTCTTCAAAAACTTACCTGACCCAGCTGATCTTCCCTCAAAACCTCAATGTCTAGTCTACTATGGTTTTGGCTATTTGTCGGCCACTGACGACTACAAAATTATTGCCAACCTTGAAGTCATCCTTGGTGGTGAGGTGGAGGGCAAGGAGATGCACATCTTCTCAACAAAAGCCAACATTTGGAAAAGGACTGAATCCCCTCTCGATTCCGACATTCAATACGAGGGGACACTTTCAAACGAGGCACTGCATTGGTTGGACATCCTTGGCATCTTAGCTTTTGATCTAGCAAAGGAGGAGTTCCGAAGATTGCCGCTGCCTATTCTAGATGGTGACTTTAGGGGTCTCAGGGCTTTTGGAGACTGTCTGTGTGCATTTGATTTTGAAAATCTTGATTTGTGGGTGATGAAAGAATACGGCGTGGCTGACTCATGGATGAAGCTCTTTAAATTAAAGGTTTCCAATCAGCCTGAGAAGATATTTGGTTGCTGGCCAATGTCGGTAATGGAAACTAGTACATTTCTGCAGAAAGGGACTTTATGCCGTGGTGGGGAGCTTGTGTTTGATTTGATAAGGAGTGTTCATACGGAAGAGAAGCCTGAAATGCATGTGTTGAGCAGCGATGCAGATTTCAGGGAAATGATCGAATATCAAGAGACTCTACTTTGGCTTGCTGCCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

361

Amino Acids

41.05

Weight (kDa)

5.36

Isoelectric Point (pI)

55.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 41 8e-09 F-box-like
F-box PF00646 4 - 40 5e-10 F-box domain
FBA_1 PF07734 105 - 292 3.1e-17 F-box associated beta propeller domain
FBA_3 PF08268 106 - 281 1.2e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 310
AccB7I CCANNNNNTGG 1 cut(s) 582
AccI GTMKAC 1 cut(s) 459
AciI CCGC 6 cut(s) 5, 70, 192, 233, 239, 716
AclWI GGATC 2 cut(s) 15, 369
AcoI YGGCCR 2 cut(s) 483, 893
AcuI CTGAAG 1 cut(s) 341
AcyI GRCGYC 1 cut(s) 307
AfaI GTAC 2 cut(s) 345, 919
AfiI CCNNNNNNNGG 2 cut(s) 582, 952
AflIII ACRYGT 2 cut(s) 22, 375
AgsI TTSAA 8 cut(s) 35, 87, 211, 409, 518, 620, 639, 788
AhdI GACNNNNNGTC 1 cut(s) 168
AhlI ACTAGT 1 cut(s) 914
AjnI CCWGG 1 cut(s) 39
AjuI GAANNNNNNNTTGG 4 cut(s) 122, 154, 510, 542
AluBI AGCT 4 cut(s) 428, 680, 844, 958
AluI AGCT 4 cut(s) 428, 680, 844, 958
Alw21I GWGCWC 2 cut(s) 284, 329
Alw26I GTCTC 4 cut(s) 255, 752, 756, 1052
AlwI GGATC 2 cut(s) 15, 369
AoxI GGCC 2 cut(s) 483, 893
ApeKI GCWGC 3 cut(s) 718, 1020, 1076
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AspLEI GCGC 2 cut(s) 99, 232
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 4 cut(s) 67, 545, 746, 817
BalI TGGCCA 1 cut(s) 895
Bbv12I GWGCWC 2 cut(s) 284, 329
BbvI GCAGC 3 cut(s) 705, 1032, 1063
BccI CCATC 2 cut(s) 400, 725
BceAI ACGGC 3 cut(s) 226, 835, 930
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 4 cut(s) 255, 752, 756, 1052
BcuI ACTAGT 1 cut(s) 914
BfaI CTAG 4 cut(s) 455, 689, 728, 915
BfmI CTRYAG 1 cut(s) 926
BfoI RGCGCY 1 cut(s) 100
BisI GCNGC 5 cut(s) 233, 716, 719, 1021, 1077
BlsI GCNGC 5 cut(s) 234, 717, 720, 1022, 1078
Bme1390I CCNGG 2 cut(s) 41, 300
BmeRI GACNNNNNGTC 1 cut(s) 168
BmiI GGNNCC 2 cut(s) 179, 389
BmrFI CCNGG 2 cut(s) 41, 300
BmsI GCATC 4 cut(s) 217, 543, 681, 1015
BpmI CTGGAG 1 cut(s) 62
BpuMI CCSGG 1 cut(s) 300
BsaBI GATNNNNATC 1 cut(s) 557
BsaHI GRCGYC 1 cut(s) 307
BsaI GGTCTC 1 cut(s) 752
BsaJI CCNNGG 4 cut(s) 299, 526, 667, 946
BsaWI WCCGGW 1 cut(s) 16
BsaXI ACNNNNNCTCC 2 cut(s) 947, 977
Bsc4I CCNNNNNNNGG 2 cut(s) 582, 952
Bse1I ACTGG 1 cut(s) 222
Bse3DI GCAATG 1 cut(s) 340
Bse8I GATNNNNATC 1 cut(s) 557
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 4 cut(s) 299, 526, 667, 946
BseGI GGATG 4 cut(s) 232, 522, 663, 843
BseJI GATNNNNATC 1 cut(s) 557
BseLI CCNNNNNNNGG 2 cut(s) 582, 952
BseMI GCAATG 1 cut(s) 340
BseMII CTCAG 2 cut(s) 763, 864
BseNI ACTGG 1 cut(s) 222
BseRI GAGGAG 3 cut(s) 170, 178, 713
BseXI GCAGC 3 cut(s) 705, 1032, 1063
BseYI CCCAGC 1 cut(s) 424
BshFI GGCC 2 cut(s) 485, 895
BsiHKAI GWGCWC 2 cut(s) 284, 329
BsiSI CCGG 2 cut(s) 17, 299
BslFI GGGAC 4 cut(s) 118, 318, 643, 949
BslI CCNNNNNNNGG 2 cut(s) 582, 952
BsmAI GTCTC 4 cut(s) 255, 752, 756, 1052
BsmFI GGGAC 4 cut(s) 118, 318, 643, 949
BsnI GGCC 2 cut(s) 485, 895
Bso31I GGTCTC 1 cut(s) 752
Bsp1286I GDGCHC 2 cut(s) 284, 329
Bsp143I GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
BspACI CCGC 6 cut(s) 5, 70, 192, 233, 239, 716
BspANI GGCC 2 cut(s) 485, 895
BspCNI CTCAG 2 cut(s) 762, 865
BspLI GGNNCC 2 cut(s) 179, 389
BspMAI CTGCAG 1 cut(s) 930
BspPI GGATC 2 cut(s) 15, 369
BspTNI GGTCTC 1 cut(s) 752
BsrDI GCAATG 1 cut(s) 340
BsrI ACTGG 1 cut(s) 222
BssECI CCNNGG 4 cut(s) 299, 526, 667, 946
BssMI GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
BssNI GRCGYC 1 cut(s) 307
BssT1I CCWWGG 2 cut(s) 526, 667
Bst2UI CCWGG 1 cut(s) 41
Bst4CI ACNGT 4 cut(s) 111, 123, 324, 767
Bst6I CTCTTC 2 cut(s) 360, 987
BstACI GRCGYC 1 cut(s) 307
BstC8I GCNNGC 3 cut(s) 95, 893, 1074
BstDEI CTNAG 3 cut(s) 676, 749, 873
BstDSI CCRYGG 1 cut(s) 946
BstF5I GGATG 4 cut(s) 232, 522, 663, 843
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 2 cut(s) 99, 232
BstKTI GATC 6 cut(s) 10, 203, 364, 433, 688, 1047
BstMAI GTCTC 4 cut(s) 255, 752, 756, 1052
BstMBI GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
BstMWI GCNNNNNNNGC 2 cut(s) 238, 1006
BstNI CCWGG 1 cut(s) 41
BstNSI RCATGY 3 cut(s) 26, 379, 1013
BstSCI CCNGG 2 cut(s) 39, 298
BstSFI CTRYAG 1 cut(s) 926
BstV1I GCAGC 3 cut(s) 705, 1032, 1063
BsuRI GGCC 2 cut(s) 485, 895
BtgI CCRYGG 1 cut(s) 946
BtgZI GCGATG 1 cut(s) 1038
BtsCI GGATG 4 cut(s) 232, 522, 663, 843
BtsI GCAGTG 2 cut(s) 154, 647
BtsIMutI CAGTG 4 cut(s) 154, 215, 486, 647
Cac8I GCNNGC 3 cut(s) 95, 893, 1074
CfoI GCGC 2 cut(s) 99, 232
Csp6I GTAC 2 cut(s) 344, 918
CviAII CATG 4 cut(s) 23, 376, 834, 1010
CviQI GTAC 2 cut(s) 344, 918
DdeI CTNAG 3 cut(s) 676, 749, 873
DpnI GATC 6 cut(s) 9, 202, 363, 432, 687, 1046
DpnII GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
DraI TTTAAA 1 cut(s) 850
DriI GACNNNNNGTC 1 cut(s) 168
EaeI YGGCCR 2 cut(s) 483, 893
Eam1104I CTCTTC 2 cut(s) 360, 987
Eam1105I GACNNNNNGTC 1 cut(s) 168
EarI CTCTTC 2 cut(s) 360, 987
EciI GGCGGA 3 cut(s) 20, 181, 228
Eco130I CCWWGG 2 cut(s) 526, 667
Eco31I GGTCTC 1 cut(s) 752
Eco57I CTGAAG 1 cut(s) 341
EcoRII CCWGG 1 cut(s) 39
EcoT14I CCWWGG 2 cut(s) 526, 667
EcoT22I ATGCAT 1 cut(s) 1011
ErhI CCWWGG 2 cut(s) 526, 667
FaeI CATG 4 cut(s) 26, 379, 837, 1013
FaiI YATR 9 cut(s) 24, 107, 377, 381, 465, 835, 943, 987, 1011
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 4 cut(s) 118, 318, 643, 949
FatI CATG 4 cut(s) 22, 375, 833, 1009
FblI GTMKAC 1 cut(s) 459
Fnu4HI GCNGC 5 cut(s) 233, 716, 719, 1021, 1077
FokI GGATG 4 cut(s) 239, 509, 650, 850
Fsp4HI GCNGC 5 cut(s) 233, 716, 719, 1021, 1077
FspBI CTAG 4 cut(s) 455, 689, 728, 915
GlaI GCGC 2 cut(s) 98, 231
GluI GCNGC 5 cut(s) 233, 716, 719, 1021, 1077
GsaI CCCAGC 1 cut(s) 428
GsuI CTGGAG 1 cut(s) 62
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 2 cut(s) 485, 895
HapII CCGG 2 cut(s) 17, 299
HhaI GCGC 2 cut(s) 99, 232
Hin1I GRCGYC 1 cut(s) 307
Hin1II CATG 4 cut(s) 26, 379, 837, 1013
Hin6I GCGC 2 cut(s) 97, 230
HinP1I GCGC 2 cut(s) 97, 230
HinfI GANTC 5 cut(s) 207, 596, 608, 830, 1060
HpaII CCGG 2 cut(s) 17, 299
HphI GGTGA 4 cut(s) 67, 545, 746, 817
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 4 cut(s) 115, 317, 613, 707
Hpy188III TCNNGA 9 cut(s) 198, 204, 359, 365, 385, 605, 728, 794, 1055
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 1 cut(s) 247
HpyCH4III ACNGT 4 cut(s) 111, 123, 324, 767
HpyCH4IV ACGT 1 cut(s) 307
HpyCH4V TGCA 8 cut(s) 333, 350, 556, 652, 776, 928, 1009, 1028
HpyF10VI GCNNNNNNNGC 2 cut(s) 238, 1006
HpyF3I CTNAG 3 cut(s) 676, 749, 873
HpySE526I ACGT 1 cut(s) 307
Hsp92I GRCGYC 1 cut(s) 307
Hsp92II CATG 4 cut(s) 26, 379, 837, 1013
HspAI GCGC 2 cut(s) 97, 230
Kzo9I GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
LmnI GCTCC 3 cut(s) 183, 332, 955
Lsp1109I GCAGC 3 cut(s) 705, 1032, 1063
LweI GCATC 4 cut(s) 217, 543, 681, 1015
MaeI CTAG 4 cut(s) 455, 689, 728, 915
MaeII ACGT 1 cut(s) 307
MaeIII GTNAC 3 cut(s) 170, 213, 734
MalI GATC 6 cut(s) 9, 202, 363, 432, 687, 1046
MboI GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
MboII GAAGA 7 cut(s) 347, 397, 425, 553, 720, 889, 1004
MhlI GDGCHC 2 cut(s) 284, 329
MlsI TGGCCA 1 cut(s) 895
MluCI AATT 4 cut(s) 137, 401, 501, 851
MluNI TGGCCA 1 cut(s) 895
MlyI GAGTC 2 cut(s) 824, 1054
MmeI TCCRAC 3 cut(s) 138, 636, 639
Mox20I TGGCCA 1 cut(s) 895
Mph1103I ATGCAT 1 cut(s) 1011
MscI TGGCCA 1 cut(s) 895
MseI TTAA 3 cut(s) 849, 854, 1084
Msp20I TGGCCA 1 cut(s) 895
MspA1I CMGCKG 2 cut(s) 428, 718
MspI CCGG 2 cut(s) 17, 299
MspR9I CCNGG 2 cut(s) 41, 300
MvaI CCWGG 1 cut(s) 41
MwoI GCNNNNNNNGC 2 cut(s) 238, 1006
NciI CCSGG 1 cut(s) 300
NdeII GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
NlaIII CATG 4 cut(s) 26, 379, 837, 1013
NlaIV GGNNCC 2 cut(s) 179, 389
NmuCI GTSAC 3 cut(s) 170, 213, 734
NsiI ATGCAT 1 cut(s) 1011
NspI RCATGY 3 cut(s) 26, 379, 1013
PciI ACATGT 2 cut(s) 22, 375
PfeI GAWTC 3 cut(s) 207, 596, 608
PflMI CCANNNNNTGG 1 cut(s) 582
PfoI TCCNGGA 1 cut(s) 39
PkrI GCNGC 5 cut(s) 234, 717, 720, 1022, 1078
PleI GAGTC 2 cut(s) 824, 1054
PpsI GAGTC 2 cut(s) 824, 1054
PscI ACATGT 2 cut(s) 22, 375
Psp6I CCWGG 1 cut(s) 39
PspFI CCCAGC 1 cut(s) 424
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 2 cut(s) 179, 389
PstI CTGCAG 1 cut(s) 930
PvuII CAGCTG 1 cut(s) 428
RsaI GTAC 2 cut(s) 345, 919
RsaNI GTAC 2 cut(s) 344, 918
SaqAI TTAA 3 cut(s) 849, 854, 1084
SatI GCNGC 5 cut(s) 233, 716, 719, 1021, 1077
Sau3AI GATC 6 cut(s) 7, 200, 361, 430, 685, 1044
SchI GAGTC 2 cut(s) 824, 1054
ScrFI CCNGG 2 cut(s) 41, 300
SduI GDGCHC 2 cut(s) 284, 329
SfaNI GCATC 4 cut(s) 217, 543, 681, 1015
SfcI CTRYAG 1 cut(s) 926
SpeI ACTAGT 1 cut(s) 914
Sse9I AATT 4 cut(s) 137, 401, 501, 851
SsiI CCGC 6 cut(s) 5, 70, 192, 233, 239, 716
SspMI CTAG 4 cut(s) 455, 689, 728, 915
StyD4I CCNGG 2 cut(s) 39, 298
StyI CCWWGG 2 cut(s) 526, 667
TaaI ACNGT 4 cut(s) 111, 123, 324, 767
TaiI ACGT 1 cut(s) 310
TaqI TCGA 2 cut(s) 606, 1047
TasI AATT 4 cut(s) 137, 401, 501, 851
TatI WGTACW 1 cut(s) 917
TauI GCSGC 2 cut(s) 235, 718
TfiI GAWTC 3 cut(s) 207, 596, 608
Tru1I TTAA 3 cut(s) 849, 854, 1084
Tru9I TTAA 3 cut(s) 849, 854, 1084
TscAI CASTG 4 cut(s) 161, 222, 493, 654
TseFI GTSAC 3 cut(s) 170, 213, 734
TseI GCWGC 3 cut(s) 718, 1020, 1076
Tsp45I GTSAC 3 cut(s) 170, 213, 734
TspDTI ATGAA 4 cut(s) 91, 824, 854, 974
TspGWI ACGGA 3 cut(s) 70, 158, 1004
TspRI CASTG 4 cut(s) 161, 222, 493, 654
Van91I CCANNNNNTGG 1 cut(s) 582
XbaI TCTAGA 1 cut(s) 727
XceI RCATGY 3 cut(s) 26, 379, 1013
XmiI GTMKAC 1 cut(s) 459
XspI CTAG 4 cut(s) 455, 689, 728, 915
ZraI GACGTC 1 cut(s) 308
Zsp2I ATGCAT 1 cut(s) 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.