RchiOBHm_Chr5g0059291

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000082
Physical Location & Seq
Forward (+)
64184000 .. 64185297
1298 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33589

Sequence Viewer

Length: 1071 bp
ATGGCGGATCACTTACCGGAACATGTGATAGTTCAAATCCTGGAGAGGTTGCCGACTAAATCCCTAATCCGCTTCACCTCCGTTTCAAAACGCTGGCGCTTCATCATACTGTCTGACCCACATTTCGCCAAGTCCCAATTCCAAATCGGTTCTCACCACCAAACCCTCCGTCACAGGCTCCTCATCTCCTCCGCCTCCGAATCTAGATTCAAGTCACTGGACTTGGATGCGCCGTCGCAGTCGCCGTTGGGAGACATTTGTTCGGTTAGGTGCCCATTGGCGCAACAACCGGGGAGCCCTCCTATCAGAATACTGTGCTCCTGCAATGGTTTGATACTTGCAACTCTTGAGGATCAAGAAAACAACATGTATATATGGAACCCATCTACTCAATTCTTCAAAAACTTACCTGACCCAGCTGATCTTCCCTCAAAACCTCAATGTCTAGTCTACTATGGTTTTGGCTATTTGTCGGCCACTGACGACTACAAAATTATTGCCAACCTTGAAGTCATCCTTGGTGGTGAGGTGGAGGGCAAGGAGATGCACATCTTCTCATCAAAAGCAAACATTTGGAAAAGGACTGAATCCCCTCTCGATTCCGACATTCAATACGAGGGGACTCTTTCAAACGAGGCACTTCATTGGTTGGACAACCTTGGCATCTTAGCTTTTGATCTAGCGAAGGAGGAGTTCCGAAGATTGCCGCTGCCTATTCTAGATGGTGACTTTAGGGGTCTCAGGGCTTTTGGAGACTGTCTCTGTGCATTTGATTTTGAAAATCTTGATTTGTGGGTGATGAAAGAATACGGCGTGGCTGACTCATGGACGAAGCTCTTTAAATTAAAGGTTTCCAATCAGCCTGAGAAGATATTTGGTTGCTGGCCAATGTCGGTAATGGAAACTAGTACATTTCTGCAGAAAGGGCCTTTATGCCGTGGTGGGGAGCTTGTGTTTGATTTGATAAGGAGTGTTCATACGGAAGAGAAGCCTGAAATGCATGTGTTGAGCAGCGATGCAGATTTCAGGGAAATGATCGAATATCAAGAGACACTACTTTGGCTTGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

356

Amino Acids

40.59

Weight (kDa)

5.27

Isoelectric Point (pI)

53.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 41 8.1e-09 F-box-like
F-box PF00646 4 - 40 4.3e-10 F-box domain
FBA_1 PF07734 99 - 288 1.1e-18 F-box associated beta propeller domain
FBA_3 PF08268 100 - 278 2.5e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 450
AciI CCGC 4 cut(s) 5, 70, 192, 707
AclWI GGATC 2 cut(s) 15, 360
AcoI YGGCCR 2 cut(s) 474, 884
AfaI GTAC 1 cut(s) 910
AfiI CCNNNNNNNGG 1 cut(s) 943
AflIII ACRYGT 2 cut(s) 22, 366
AgsI TTSAA 8 cut(s) 35, 87, 211, 400, 509, 611, 630, 779
AhlI ACTAGT 1 cut(s) 905
AjnI CCWGG 1 cut(s) 39
AjuI GAANNNNNNNTTGG 4 cut(s) 122, 154, 501, 533
AluBI AGCT 4 cut(s) 419, 671, 835, 949
AluI AGCT 4 cut(s) 419, 671, 835, 949
Alw21I GWGCWC 1 cut(s) 320
Alw26I GTCTC 5 cut(s) 246, 743, 747, 764, 1043
AlwI GGATC 2 cut(s) 15, 360
AoxI GGCC 3 cut(s) 474, 884, 926
ApeKI GCWGC 2 cut(s) 709, 1011
ArsI GACNNNNNNTTYG 4 cut(s) 107, 139, 154, 186
AspLEI GCGC 3 cut(s) 99, 232, 283
AspS9I GGNCC 1 cut(s) 926
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 5 cut(s) 67, 146, 536, 737, 808
BaeGI GKGCMC 1 cut(s) 275
BalI TGGCCA 1 cut(s) 886
BanI GGYRCC 1 cut(s) 270
BanII GRGCYC 1 cut(s) 299
Bbv12I GWGCWC 1 cut(s) 320
BbvI GCAGC 2 cut(s) 696, 1023
BccI CCATC 2 cut(s) 391, 716
BceAI ACGGC 4 cut(s) 217, 229, 826, 921
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 5 cut(s) 246, 743, 747, 764, 1043
BcuI ACTAGT 1 cut(s) 905
BfaI CTAG 5 cut(s) 204, 446, 680, 719, 906
BfmI CTRYAG 1 cut(s) 917
BfoI RGCGCY 1 cut(s) 100
BisI GCNGC 3 cut(s) 707, 710, 1012
BlsI GCNGC 3 cut(s) 708, 711, 1013
Bme1390I CCNGG 2 cut(s) 41, 291
BmgT120I GGNCC 1 cut(s) 926
BmiI GGNNCC 4 cut(s) 179, 272, 296, 380
BmrFI CCNGG 2 cut(s) 41, 291
BmsI GCATC 4 cut(s) 217, 534, 672, 1006
BplI GAGNNNNNCTC 2 cut(s) 744, 776
BpmI CTGGAG 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 368
BpuMI CCSGG 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 548
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 4 cut(s) 290, 517, 658, 937
BsaWI WCCGGW 1 cut(s) 16
BsaXI ACNNNNNCTCC 2 cut(s) 938, 968
Bsc4I CCNNNNNNNGG 1 cut(s) 943
Bse1I ACTGG 1 cut(s) 222
Bse3DI GCAATG 1 cut(s) 331
Bse8I GATNNNNATC 1 cut(s) 548
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 4 cut(s) 290, 517, 658, 937
BseGI GGATG 2 cut(s) 232, 513
BseJI GATNNNNATC 1 cut(s) 548
BseLI CCNNNNNNNGG 1 cut(s) 943
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 2 cut(s) 754, 855
BseNI ACTGG 1 cut(s) 222
BseRI GAGGAG 3 cut(s) 170, 178, 704
BseSI GKGCMC 1 cut(s) 275
BseXI GCAGC 2 cut(s) 696, 1023
BseYI CCCAGC 1 cut(s) 415
BshFI GGCC 3 cut(s) 476, 886, 928
BshNI GGYRCC 1 cut(s) 270
BsiHKAI GWGCWC 1 cut(s) 320
BsiSI CCGG 2 cut(s) 17, 290
BslFI GGGAC 2 cut(s) 118, 634
BslI CCNNNNNNNGG 1 cut(s) 943
BsmAI GTCTC 5 cut(s) 246, 743, 747, 764, 1043
BsmFI GGGAC 2 cut(s) 118, 634
BsnI GGCC 3 cut(s) 476, 886, 928
Bso31I GGTCTC 1 cut(s) 743
Bsp1286I GDGCHC 3 cut(s) 275, 299, 320
Bsp143I GATC 5 cut(s) 7, 352, 421, 676, 1035
BspACI CCGC 4 cut(s) 5, 70, 192, 707
BspANI GGCC 3 cut(s) 476, 886, 928
BspCNI CTCAG 2 cut(s) 753, 856
BspLI GGNNCC 4 cut(s) 179, 272, 296, 380
BspMAI CTGCAG 1 cut(s) 921
BspPI GGATC 2 cut(s) 15, 360
BspT107I GGYRCC 1 cut(s) 270
BspTNI GGTCTC 1 cut(s) 743
BsrDI GCAATG 1 cut(s) 331
BsrI ACTGG 1 cut(s) 222
BssECI CCNNGG 4 cut(s) 290, 517, 658, 937
BssMI GATC 5 cut(s) 7, 352, 421, 676, 1035
BssT1I CCWWGG 2 cut(s) 517, 658
Bst2UI CCWGG 1 cut(s) 41
Bst4CI ACNGT 3 cut(s) 111, 315, 758
Bst6I CTCTTC 1 cut(s) 978
BstC8I GCNNGC 2 cut(s) 95, 884
BstDEI CTNAG 3 cut(s) 667, 740, 864
BstDSI CCRYGG 1 cut(s) 937
BstF5I GGATG 2 cut(s) 232, 513
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 3 cut(s) 99, 232, 283
BstKTI GATC 5 cut(s) 10, 355, 424, 679, 1038
BstMAI GTCTC 5 cut(s) 246, 743, 747, 764, 1043
BstMBI GATC 5 cut(s) 7, 352, 421, 676, 1035
BstMWI GCNNNNNNNGC 2 cut(s) 925, 997
BstNI CCWGG 1 cut(s) 41
BstNSI RCATGY 3 cut(s) 26, 370, 1004
BstSCI CCNGG 2 cut(s) 39, 289
BstSFI CTRYAG 1 cut(s) 917
BstSLI GKGCMC 1 cut(s) 275
BstV1I GCAGC 2 cut(s) 696, 1023
BsuRI GGCC 3 cut(s) 476, 886, 928
BtgI CCRYGG 1 cut(s) 937
BtgZI GCGATG 1 cut(s) 1029
BtsCI GGATG 2 cut(s) 232, 513
BtsIMutI CAGTG 2 cut(s) 215, 477
Cac8I GCNNGC 2 cut(s) 95, 884
CfoI GCGC 3 cut(s) 99, 232, 283
Cfr13I GGNCC 1 cut(s) 926
Csp6I GTAC 1 cut(s) 909
CviAII CATG 4 cut(s) 23, 367, 825, 1001
CviQI GTAC 1 cut(s) 909
DdeI CTNAG 3 cut(s) 667, 740, 864
DpnI GATC 5 cut(s) 9, 354, 423, 678, 1037
DpnII GATC 5 cut(s) 7, 352, 421, 676, 1035
DraI TTTAAA 1 cut(s) 841
EaeI YGGCCR 2 cut(s) 474, 884
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
EciI GGCGGA 2 cut(s) 20, 181
Eco130I CCWWGG 2 cut(s) 517, 658
Eco24I GRGCYC 1 cut(s) 299
Eco31I GGTCTC 1 cut(s) 743
EcoO109I RGGNCCY 1 cut(s) 926
EcoRII CCWGG 1 cut(s) 39
EcoT14I CCWWGG 2 cut(s) 517, 658
EcoT22I ATGCAT 1 cut(s) 1002
EcoT38I GRGCYC 1 cut(s) 299
ErhI CCWWGG 2 cut(s) 517, 658
FaeI CATG 4 cut(s) 26, 370, 828, 1004
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FaqI GGGAC 2 cut(s) 118, 634
FatI CATG 4 cut(s) 22, 366, 824, 1000
FblI GTMKAC 1 cut(s) 450
Fnu4HI GCNGC 3 cut(s) 707, 710, 1012
FokI GGATG 2 cut(s) 239, 500
FriOI GRGCYC 1 cut(s) 299
Fsp4HI GCNGC 3 cut(s) 707, 710, 1012
FspBI CTAG 5 cut(s) 204, 446, 680, 719, 906
GlaI GCGC 3 cut(s) 98, 231, 282
GluI GCNGC 3 cut(s) 707, 710, 1012
GsaI CCCAGC 1 cut(s) 419
GsuI CTGGAG 1 cut(s) 62
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 3 cut(s) 476, 886, 928
HapII CCGG 2 cut(s) 17, 290
HhaI GCGC 3 cut(s) 99, 232, 283
Hin1II CATG 4 cut(s) 26, 370, 828, 1004
Hin6I GCGC 3 cut(s) 97, 230, 281
HinP1I GCGC 3 cut(s) 97, 230, 281
HinfI GANTC 6 cut(s) 200, 207, 587, 599, 622, 821
HpaII CCGG 2 cut(s) 17, 290
HphI GGTGA 5 cut(s) 67, 146, 536, 737, 808
Hpy166II GTNNAC 1 cut(s) 451
Hpy188I TCNGA 5 cut(s) 115, 199, 308, 604, 698
Hpy188III TCNNGA 7 cut(s) 204, 347, 356, 596, 719, 785, 1046
Hpy8I GTNNAC 1 cut(s) 451
Hpy99I CGWCG 1 cut(s) 238
HpyAV CCTTC 1 cut(s) 679
HpyCH4III ACNGT 3 cut(s) 111, 315, 758
HpyCH4V TGCA 7 cut(s) 324, 341, 547, 767, 919, 1000, 1019
HpyF10VI GCNNNNNNNGC 2 cut(s) 925, 997
HpyF3I CTNAG 3 cut(s) 667, 740, 864
Hsp92II CATG 4 cut(s) 26, 370, 828, 1004
HspAI GCGC 3 cut(s) 97, 230, 281
Kzo9I GATC 5 cut(s) 7, 352, 421, 676, 1035
LmnI GCTCC 4 cut(s) 183, 294, 323, 946
Lsp1109I GCAGC 2 cut(s) 696, 1023
LweI GCATC 4 cut(s) 217, 534, 672, 1006
MaeI CTAG 5 cut(s) 204, 446, 680, 719, 906
MaeIII GTNAC 3 cut(s) 170, 213, 725
MalI GATC 5 cut(s) 9, 354, 423, 678, 1037
MboI GATC 5 cut(s) 7, 352, 421, 676, 1035
MboII GAAGA 6 cut(s) 388, 416, 544, 711, 880, 995
MhlI GDGCHC 3 cut(s) 275, 299, 320
MlsI TGGCCA 1 cut(s) 886
MluCI AATT 4 cut(s) 137, 392, 492, 842
MluNI TGGCCA 1 cut(s) 886
MlyI GAGTC 2 cut(s) 616, 815
MmeI TCCRAC 2 cut(s) 627, 630
Mox20I TGGCCA 1 cut(s) 886
Mph1103I ATGCAT 1 cut(s) 1002
MscI TGGCCA 1 cut(s) 886
MseI TTAA 2 cut(s) 840, 845
Msp20I TGGCCA 1 cut(s) 886
MspA1I CMGCKG 2 cut(s) 419, 709
MspI CCGG 2 cut(s) 17, 290
MspR9I CCNGG 2 cut(s) 41, 291
MvaI CCWGG 1 cut(s) 41
MwoI GCNNNNNNNGC 2 cut(s) 925, 997
NciI CCSGG 1 cut(s) 291
NdeII GATC 5 cut(s) 7, 352, 421, 676, 1035
NlaIII CATG 4 cut(s) 26, 370, 828, 1004
NlaIV GGNNCC 4 cut(s) 179, 272, 296, 380
NmuCI GTSAC 3 cut(s) 170, 213, 725
NsiI ATGCAT 1 cut(s) 1002
NspI RCATGY 3 cut(s) 26, 370, 1004
PciI ACATGT 2 cut(s) 22, 366
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PfeI GAWTC 4 cut(s) 200, 207, 587, 599
PfoI TCCNGGA 1 cut(s) 39
PkrI GCNGC 3 cut(s) 708, 711, 1013
PleI GAGTC 2 cut(s) 616, 815
PpsI GAGTC 2 cut(s) 616, 815
PscI ACATGT 2 cut(s) 22, 366
Psp6I CCWGG 1 cut(s) 39
PspFI CCCAGC 1 cut(s) 415
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 4 cut(s) 179, 272, 296, 380
PspPI GGNCC 1 cut(s) 926
PstI CTGCAG 1 cut(s) 921
PvuII CAGCTG 1 cut(s) 419
RsaI GTAC 1 cut(s) 910
RsaNI GTAC 1 cut(s) 909
SaqAI TTAA 2 cut(s) 840, 845
SatI GCNGC 3 cut(s) 707, 710, 1012
Sau3AI GATC 5 cut(s) 7, 352, 421, 676, 1035
Sau96I GGNCC 1 cut(s) 926
SchI GAGTC 2 cut(s) 616, 815
ScrFI CCNGG 2 cut(s) 41, 291
SduI GDGCHC 3 cut(s) 275, 299, 320
SfaNI GCATC 4 cut(s) 217, 534, 672, 1006
SfcI CTRYAG 1 cut(s) 917
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
SpeI ACTAGT 1 cut(s) 905
Sse9I AATT 4 cut(s) 137, 392, 492, 842
SsiI CCGC 4 cut(s) 5, 70, 192, 707
SspMI CTAG 5 cut(s) 204, 446, 680, 719, 906
StyD4I CCNGG 2 cut(s) 39, 289
StyI CCWWGG 2 cut(s) 517, 658
TaaI ACNGT 3 cut(s) 111, 315, 758
TaqI TCGA 2 cut(s) 597, 1038
TasI AATT 4 cut(s) 137, 392, 492, 842
TatI WGTACW 1 cut(s) 908
TauI GCSGC 1 cut(s) 709
TfiI GAWTC 4 cut(s) 200, 207, 587, 599
Tru1I TTAA 2 cut(s) 840, 845
Tru9I TTAA 2 cut(s) 840, 845
TscAI CASTG 2 cut(s) 222, 484
TseFI GTSAC 3 cut(s) 170, 213, 725
TseI GCWGC 2 cut(s) 709, 1011
Tsp45I GTSAC 3 cut(s) 170, 213, 725
TspDTI ATGAA 4 cut(s) 91, 632, 815, 965
TspGWI ACGGA 3 cut(s) 70, 158, 995
TspRI CASTG 2 cut(s) 222, 484
XbaI TCTAGA 2 cut(s) 203, 718
XceI RCATGY 3 cut(s) 26, 370, 1004
XmiI GTMKAC 1 cut(s) 450
XspI CTAG 5 cut(s) 204, 446, 680, 719, 906
Zsp2I ATGCAT 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.