Rorug02G0147500

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Reverse (-)
12943716 .. 12946293
2578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0147500.1

Sequence Viewer

Length: 1089 bp
ATGGATCGAGCAAGGAGGGCAAAAGAGTTGGTAGCAAACAAGAACAGCATGATATACATGGACCTCAAGGATATAGTCAAGGATCATGCTCTCCCATTCCTCCCCGCCAAATCACTGTTCAGGTTCAATGGGGTTTGTAAGGACTGGAAGATCCAGATCAGATCTCCTTTCTTTGCCCACAAGCAGTCAACTAGCTTTTCTGATGTCTCGGGCTTCTTTCTTGTTTCCGCATCAACCGTACCTTCATTTATCTCTATTGATTCCATGGCCTATGGTGTTCCCGACCCGTCACTGAAGTTTTTACCTGAGCCAGTTGACATAAGGGCTTCTTCCAATGGACTACTATGCTGCCAGGGACGTGAAGGCTATAAGGCTTACTACATCTGCAATCCGGTTACTAAGCAGTGGAAAAAACTTCCTAAACCAAATGCTGACCATGGATCTGACCCTGCTCTGGTTCTCATCTTTGAGCCGTCTTTGCTCAGTTTTGTGGCCGAGTACAAGCTGGTCTGTGCTTTCCCATCACAGGATTTTGAGAATGGACATGAATTTGAGATCTATTCCTCCAAGGAGGGGTCTTGGAGAATTTCTGGTGAGATTTTCTATGGCAGTGGATCTGTTGTGCCAAGATCTGGTGTTTCTGTGAATGACATAATCTATTGGTATGCATCAAGTGGTAGGATTCTTGTTTTTGACCTGAAGATGGAGAGGGCACAACTCCTTTATGGCCATGGTTATTATGATTCAATCTTGGGTGTGATTGATGGAAAGCTATGTTCGACCAAGGCTCAGGGTACTGGAGTAACCATAAGTGTGTTGTCTAATGCTTACACAAACACAATGCAGATGCACAGCTCAGTTAAGGCATGGGAAAGGAAACTTACAATCAATCTTACCCCTGCACCAGTACCTTCAACGGCTGGTAGTTCTACTGGTAGTTTATTGTTTGCAAGTGGGAATCTAGTATTGTACCGGTGTGGCTCAAAACTCCATTCGTACAACCTGCGGACTAAAGAAACTCTATACATAGGTGATGAGCTTTACCATGGGACATTTGTTCCTCATGTGAACAGCCTCGTGGAGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

362

Amino Acids

40.16

Weight (kDa)

8.67

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 107 - 245 7e-09 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 108 - 287 3.4e-14 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 110 - 240 1.9e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1011
AccB7I CCANNNNNTGG 1 cut(s) 632
AciI CCGC 3 cut(s) 105, 228, 1006
AclWI GGATC 5 cut(s) 12, 90, 145, 448, 622
AcoI YGGCCR 2 cut(s) 492, 727
AcsI RAATTY 2 cut(s) 548, 585
AcuI CTGAAG 2 cut(s) 314, 719
AfaI GTAC 6 cut(s) 240, 500, 796, 909, 971, 998
AfiI CCNNNNNNNGG 5 cut(s) 454, 526, 573, 632, 703
AgeI ACCGGT 1 cut(s) 972
AgsI TTSAA 3 cut(s) 127, 747, 915
AjiI CACGTC 1 cut(s) 359
AjnI CCWGG 1 cut(s) 351
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 5 cut(s) 195, 505, 772, 855, 1039
AluI AGCT 5 cut(s) 195, 505, 772, 855, 1039
Alw26I GTCTC 1 cut(s) 211
AlwI GGATC 5 cut(s) 12, 90, 145, 448, 622
Ama87I CYCGRG 1 cut(s) 208
AoxI GGCC 3 cut(s) 267, 492, 727
ApeKI GCWGC 1 cut(s) 348
ApoI RAATTY 2 cut(s) 548, 585
AsiGI ACCGGT 1 cut(s) 972
AspS9I GGNCC 1 cut(s) 61
AsuHPI GGTGA 2 cut(s) 605, 1043
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 1 cut(s) 61
BaeGI GKGCMC 1 cut(s) 715
BaeI ACNNNNGTAYC 2 cut(s) 786, 819
BalI TGGCCA 1 cut(s) 729
BauI CACGAG 1 cut(s) 1076
BbvI GCAGC 1 cut(s) 335
BccI CCATC 3 cut(s) 529, 697, 758
BceAI ACGGC 2 cut(s) 457, 933
BciT130I CCWGG 1 cut(s) 353
BcoDI GTCTC 1 cut(s) 211
BfaI CTAG 2 cut(s) 192, 962
BfuAI ACCTGC 1 cut(s) 1011
BglII AGATCT 3 cut(s) 161, 555, 629
BisI GCNGC 1 cut(s) 349
BlsI GCNGC 1 cut(s) 350
Bme1390I CCNGG 1 cut(s) 353
Bme18I GGWCC 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 208
BmgBI CACGTC 1 cut(s) 359
BmgT120I GGNCC 1 cut(s) 61
BmrFI CCNGG 1 cut(s) 353
BmsI GCATC 3 cut(s) 239, 677, 837
BpmI CTGGAG 1 cut(s) 819
Bpu10I CCTNAGC 2 cut(s) 306, 789
BpuEI CTTGAG 1 cut(s) 50
BsaBI GATNNNNATC 1 cut(s) 155
BsaJI CCNNGG 7 cut(s) 264, 352, 436, 567, 730, 783, 1045
BsaWI WCCGGW 2 cut(s) 391, 972
Bsc4I CCNNNNNNNGG 5 cut(s) 454, 526, 573, 632, 703
Bse118I RCCGGY 1 cut(s) 972
Bse1I ACTGG 5 cut(s) 149, 311, 802, 905, 937
Bse8I GATNNNNATC 1 cut(s) 155
BseBI CCWGG 1 cut(s) 353
BseDI CCNNGG 7 cut(s) 264, 352, 436, 567, 730, 783, 1045
BseJI GATNNNNATC 1 cut(s) 155
BseLI CCNNNNNNNGG 5 cut(s) 454, 526, 573, 632, 703
BseMII CTCAG 4 cut(s) 297, 496, 803, 870
BseNI ACTGG 5 cut(s) 149, 311, 802, 905, 937
BseSI GKGCMC 1 cut(s) 715
BseXI GCAGC 1 cut(s) 335
BsgI GTGCAG 1 cut(s) 885
BshFI GGCC 3 cut(s) 269, 494, 729
BshTI ACCGGT 1 cut(s) 972
BsiHKCI CYCGRG 1 cut(s) 208
BsiSI CCGG 2 cut(s) 392, 973
BslFI GGGAC 2 cut(s) 369, 1063
BslI CCNNNNNNNGG 5 cut(s) 454, 526, 573, 632, 703
BsmAI GTCTC 1 cut(s) 211
BsmFI GGGAC 2 cut(s) 369, 1063
BsnI GGCC 3 cut(s) 269, 494, 729
BsoBI CYCGRG 1 cut(s) 208
Bsp1286I GDGCHC 1 cut(s) 715
Bsp143I GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
Bsp19I CCATGG 4 cut(s) 264, 436, 730, 1045
BspACI CCGC 3 cut(s) 105, 228, 1006
BspANI GGCC 3 cut(s) 269, 494, 729
BspCNI CTCAG 4 cut(s) 298, 495, 802, 869
BspMI ACCTGC 1 cut(s) 1011
BspPI GGATC 5 cut(s) 12, 90, 145, 448, 622
BsrFI RCCGGY 1 cut(s) 972
BsrI ACTGG 5 cut(s) 149, 311, 802, 905, 937
BssAI RCCGGY 1 cut(s) 972
BssECI CCNNGG 7 cut(s) 264, 352, 436, 567, 730, 783, 1045
BssMI GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
BssSI CACGAG 1 cut(s) 1076
BssT1I CCWWGG 6 cut(s) 264, 436, 567, 730, 783, 1045
Bst2BI CACGAG 1 cut(s) 1076
Bst2UI CCWGG 1 cut(s) 353
Bst4CI ACNGT 2 cut(s) 117, 238
BstDEI CTNAG 5 cut(s) 306, 399, 482, 789, 856
BstDSI CCRYGG 4 cut(s) 264, 436, 730, 1045
BstKTI GATC 9 cut(s) 7, 85, 153, 159, 164, 443, 558, 617, 632
BstMAI GTCTC 1 cut(s) 211
BstMBI GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
BstMWI GCNNNNNNNGC 2 cut(s) 17, 478
BstNI CCWGG 1 cut(s) 353
BstSCI CCNGG 1 cut(s) 351
BstSLI GKGCMC 1 cut(s) 715
BstV1I GCAGC 1 cut(s) 335
BstX2I RGATCY 6 cut(s) 150, 161, 440, 555, 614, 629
BstYI RGATCY 6 cut(s) 150, 161, 440, 555, 614, 629
BsuRI GGCC 3 cut(s) 269, 494, 729
BtgI CCRYGG 4 cut(s) 264, 436, 730, 1045
BtrI CACGTC 1 cut(s) 359
BtsI GCAGTG 2 cut(s) 410, 616
BtsIMutI CAGTG 4 cut(s) 113, 290, 410, 616
BveI ACCTGC 1 cut(s) 1011
Cfr10I RCCGGY 1 cut(s) 972
Cfr13I GGNCC 1 cut(s) 61
Csp6I GTAC 6 cut(s) 239, 499, 795, 908, 970, 997
CspAI ACCGGT 1 cut(s) 972
CviQI GTAC 6 cut(s) 239, 499, 795, 908, 970, 997
DdeI CTNAG 5 cut(s) 306, 399, 482, 789, 856
DpnI GATC 9 cut(s) 6, 84, 152, 158, 163, 442, 557, 616, 631
DpnII GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
EaeI YGGCCR 2 cut(s) 492, 727
Eco130I CCWWGG 6 cut(s) 264, 436, 567, 730, 783, 1045
Eco47I GGWCC 1 cut(s) 61
Eco57I CTGAAG 2 cut(s) 314, 719
Eco88I CYCGRG 1 cut(s) 208
EcoRII CCWGG 1 cut(s) 351
EcoT14I CCWWGG 6 cut(s) 264, 436, 567, 730, 783, 1045
EcoT22I ATGCAT 1 cut(s) 670
ErhI CCWWGG 6 cut(s) 264, 436, 567, 730, 783, 1045
FalI AAGNNNNNCTT 2 cut(s) 313, 345
FaqI GGGAC 2 cut(s) 369, 1063
FauI CCCGC 1 cut(s) 112
Fnu4HI GCNGC 1 cut(s) 349
Fsp4HI GCNGC 1 cut(s) 349
FspBI CTAG 2 cut(s) 192, 962
GluI GCNGC 1 cut(s) 349
GsuI CTGGAG 1 cut(s) 819
HaeIII GGCC 3 cut(s) 269, 494, 729
HapII CCGG 2 cut(s) 392, 973
HincII GTYRAC 2 cut(s) 189, 316
HindII GTYRAC 2 cut(s) 189, 316
HinfI GANTC 4 cut(s) 260, 682, 743, 958
HpaII CCGG 2 cut(s) 392, 973
HphI GGTGA 2 cut(s) 605, 1043
Hpy166II GTNNAC 3 cut(s) 189, 316, 1069
Hpy188I TCNGA 3 cut(s) 161, 202, 445
Hpy188III TCNNGA 2 cut(s) 154, 281
Hpy8I GTNNAC 3 cut(s) 189, 316, 1069
HpyAV CCTTC 3 cut(s) 252, 356, 921
HpyCH4III ACNGT 2 cut(s) 117, 238
HpyCH4IV ACGT 1 cut(s) 358
HpyCH4V TGCA 6 cut(s) 387, 668, 844, 850, 902, 950
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 478
HpyF3I CTNAG 5 cut(s) 306, 399, 482, 789, 856
HpySE526I ACGT 1 cut(s) 358
Kzo9I GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
Lsp1109I GCAGC 1 cut(s) 335
LweI GCATC 3 cut(s) 239, 677, 837
MaeI CTAG 2 cut(s) 192, 962
MaeII ACGT 1 cut(s) 358
MaeIII GTNAC 3 cut(s) 288, 394, 802
MalI GATC 9 cut(s) 6, 84, 152, 158, 163, 442, 557, 616, 631
MboI GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
MboII GAAGA 3 cut(s) 160, 321, 712
MflI RGATCY 6 cut(s) 150, 161, 440, 555, 614, 629
MhlI GDGCHC 1 cut(s) 715
MlsI TGGCCA 1 cut(s) 729
MluCI AATT 2 cut(s) 548, 585
MluNI TGGCCA 1 cut(s) 729
MnlI CCTC 8 cut(s) 9, 74, 110, 565, 574, 702, 1071, 1085
Mox20I TGGCCA 1 cut(s) 729
Mph1103I ATGCAT 1 cut(s) 670
MscI TGGCCA 1 cut(s) 729
MseI TTAA 1 cut(s) 861
MslI CAYNNNNRTG 1 cut(s) 812
Msp20I TGGCCA 1 cut(s) 729
MspI CCGG 2 cut(s) 392, 973
MspR9I CCNGG 1 cut(s) 353
MvaI CCWGG 1 cut(s) 353
MwoI GCNNNNNNNGC 2 cut(s) 17, 478
NcoI CCATGG 4 cut(s) 264, 436, 730, 1045
NdeII GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 1 cut(s) 288
NsiI ATGCAT 1 cut(s) 670
PfeI GAWTC 4 cut(s) 260, 682, 743, 958
PflMI CCANNNNNTGG 1 cut(s) 632
PinAI ACCGGT 1 cut(s) 972
PkrI GCNGC 1 cut(s) 350
Psp6I CCWGG 1 cut(s) 351
PspGI CCWGG 1 cut(s) 351
PspPI GGNCC 1 cut(s) 61
PsuI RGATCY 6 cut(s) 150, 161, 440, 555, 614, 629
RsaI GTAC 6 cut(s) 240, 500, 796, 909, 971, 998
RsaNI GTAC 6 cut(s) 239, 499, 795, 908, 970, 997
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 1 cut(s) 861
SatI GCNGC 1 cut(s) 349
Sau3AI GATC 9 cut(s) 4, 82, 150, 156, 161, 440, 555, 614, 629
Sau96I GGNCC 1 cut(s) 61
ScrFI CCNGG 1 cut(s) 353
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 3 cut(s) 239, 677, 837
SinI GGWCC 1 cut(s) 61
SmiMI CAYNNNNRTG 1 cut(s) 812
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
Sse9I AATT 2 cut(s) 548, 585
SsiI CCGC 3 cut(s) 105, 228, 1006
SspMI CTAG 2 cut(s) 192, 962
StyD4I CCNGG 1 cut(s) 351
StyI CCWWGG 6 cut(s) 264, 436, 567, 730, 783, 1045
TaaI ACNGT 2 cut(s) 117, 238
TaiI ACGT 1 cut(s) 361
TaqI TCGA 2 cut(s) 7, 779
TasI AATT 2 cut(s) 548, 585
TatI WGTACW 1 cut(s) 498
TfiI GAWTC 4 cut(s) 260, 682, 743, 958
Tru1I TTAA 1 cut(s) 861
Tru9I TTAA 1 cut(s) 861
TscAI CASTG 4 cut(s) 120, 297, 410, 616
TseFI GTSAC 1 cut(s) 288
TseI GCWGC 1 cut(s) 348
Tsp45I GTSAC 1 cut(s) 288
TspDTI ATGAA 2 cut(s) 234, 561
TspRI CASTG 4 cut(s) 120, 297, 410, 616
Van91I CCANNNNNTGG 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 61
XapI RAATTY 2 cut(s) 548, 585
XspI CTAG 2 cut(s) 192, 962
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.