FvH4_6g14981

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000082
Physical Location & Seq
Reverse (-)
9292753 .. 9295192
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14981.t1

Sequence Viewer

Length: 1116 bp
ATGGCGGACGCGACCCTACCCGAAGATGTCATGGTGCTTATCCTCCGCTTGCTTCCCGTGAAATCCTTAATCCGATTCACCTGCGTTTCCAAACGCTTCCATTCCATCATTCTCTCCGACCCCAAATTTGCCAAATCCCAATTTGAAACAGCTCGTGACCGCAAAACCCTCGATCGCAGACTCCTCTACAACACAACCATCCATCCACTCAATCGCCGAGTCCGCGACTCCACAATTTCCACTCGCCTCGAATCCCTGCTTTTGGAGACGACGTCGTTTGGATACAGTTCCTCCGTTAGAAGGCTAAAGTATCCTTTCCGGCCACCGGCCGGTAATGACCTGCTACTGGGCTCCTCTAACGGTATTGTTTTTCTCGCATTTGATAAGAAAGTATTCTATGCCTGGAACCCATCCACTGGATTCTATAACGAATTACCTGACCCAGGTGATTTATGTGATCAACAATATTGTTTCCGTTCTGGTGTTGGCTATTTGTCGGCCACCAACGAATACAAAGTTTTTATAGCCTCCGATCAGACTCGGTACGGCATTTTCTCGTCGAGAGCTCAAACATGGAAACGACTTGAGGCGATTCCGGAATCATGTCTTTATTCTCCTCGGGGGACCCTTTTGAATGAGGCACTTCATTGGATTGATCACGACAACGGCCTCATGGTTTTTGATTTGGCACAGGAGAAGTTCAGAAAAATGGCACTGCCTAAATTCGATGAACGCGGTTTAAATCAGTGGGGAAATTTAGGGGTTTCTGCTGATGGTTGCCTGTCTTTTGCTTATTCTACGAAAGCTGATCGTGACTGTTTGTGTGTATGGGTCATGAAGGAATATGGTGTGCTTGACTCATGGACTAAGCTCTTTAACTTGTTTTCAAATCCGCCAGAGGGGCTTTGGGGTTACGGAAGTGTATTGGTTTTGGAAACTAGTATTGTTGCCCACATATACACTATAACGAAGGTTGACGATTGTAATTATGCCGACGTGAAAGGGTGGATAAAGATTCTTCACAAAGAAGAGGACAAGTGTGGCATGTATATGGTTGAGGGCTTTGATCTTAAGATGATTCAATATCAAGAGACTTTGCTTCGGTTAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

372

Amino Acids

42.54

Weight (kDa)

6.99

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 40 2e-07 F-box-like
F-box PF00646 6 - 43 7.2e-09 F-box domain
FBA_3 PF08268 117 - 290 9.7e-08 F-box associated beta propeller domain
FBA_1 PF07734 120 - 317 2.5e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
AatII GACGTC 1 cut(s) 275
Acc36I ACCTGC 2 cut(s) 89, 348
AccB7I CCANNNNNTGG 1 cut(s) 416
AccII CGCG 3 cut(s) 11, 225, 735
AccIII TCCGGA 1 cut(s) 595
AciI CCGC 6 cut(s) 5, 46, 160, 223, 735, 893
AcoI YGGCCR 3 cut(s) 320, 327, 498
AcsI RAATTY 3 cut(s) 125, 722, 754
AcyI GRCGYC 1 cut(s) 272
AfaI GTAC 1 cut(s) 545
AfiI CCNNNNNNNGG 8 cut(s) 262, 300, 325, 329, 346, 416, 443, 899
AflII CTTAAG 1 cut(s) 1070
AgsI TTSAA 4 cut(s) 146, 634, 888, 1082
AhlI ACTAGT 1 cut(s) 938
AjiI CACGTC 1 cut(s) 997
AjnI CCWGG 2 cut(s) 401, 442
AluBI AGCT 4 cut(s) 152, 566, 806, 871
AluI AGCT 4 cut(s) 152, 566, 806, 871
Alw21I GWGCWC 1 cut(s) 568
Alw26I GTCTC 2 cut(s) 260, 1085
Ama87I CYCGRG 1 cut(s) 618
Aor13HI TCCGGA 1 cut(s) 595
AoxI GGCC 4 cut(s) 320, 327, 498, 667
ApoI RAATTY 3 cut(s) 125, 722, 754
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp700I GAANNNNTTC 1 cut(s) 392
AspS9I GGNCC 1 cut(s) 624
AsuHPI GGTGA 2 cut(s) 70, 458
AvaI CYCGRG 1 cut(s) 618
AvaII GGWCC 1 cut(s) 624
BanII GRGCYC 2 cut(s) 353, 568
BauI CACGAG 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 568
BccI CCATC 5 cut(s) 113, 206, 210, 418, 767
BceAI ACGGC 2 cut(s) 562, 682
BcgI CGANNNNNNTGC 4 cut(s) 63, 97, 151, 185
BciT130I CCWGG 2 cut(s) 403, 444
BciVI GTATCC 2 cut(s) 275, 321
BclI TGATCA 2 cut(s) 457, 655
BcoDI GTCTC 2 cut(s) 260, 1085
BcuI ACTAGT 1 cut(s) 938
BfaI CTAG 1 cut(s) 939
BfrI CTTAAG 1 cut(s) 1070
BfuAI ACCTGC 2 cut(s) 89, 348
BfuI GTATCC 2 cut(s) 275, 321
BglI GCCNNNNNGGC 1 cut(s) 901
Bme1390I CCNGG 2 cut(s) 403, 444
Bme18I GGWCC 1 cut(s) 624
BmeT110I CYCGRG 1 cut(s) 618
BmgBI CACGTC 1 cut(s) 997
BmgT120I GGNCC 1 cut(s) 624
BmiI GGNNCC 4 cut(s) 352, 407, 625, 626
BmrFI CCNGG 2 cut(s) 403, 444
BmrI ACTGGG 1 cut(s) 356
BmuI ACTGGG 1 cut(s) 356
BpuEI CTTGAG 1 cut(s) 605
BsaHI GRCGYC 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 442, 617
BsaWI WCCGGW 1 cut(s) 595
BsaXI ACNNNNNCTCC 4 cut(s) 257, 275, 287, 305
Bsc4I CCNNNNNNNGG 8 cut(s) 262, 300, 325, 329, 346, 416, 443, 899
Bse118I RCCGGY 2 cut(s) 325, 329
Bse1I ACTGG 2 cut(s) 351, 421
BseAI TCCGGA 1 cut(s) 595
BseBI CCWGG 2 cut(s) 403, 444
BseDI CCNNGG 2 cut(s) 442, 617
BseGI GGATG 3 cut(s) 198, 202, 410
BseLI CCNNNNNNNGG 8 cut(s) 262, 300, 325, 329, 346, 416, 443, 899
BseNI ACTGG 2 cut(s) 351, 421
BseRI GAGGAG 3 cut(s) 173, 343, 606
BseX3I CGGCCG 1 cut(s) 327
Bsh1236I CGCG 3 cut(s) 11, 225, 735
Bsh1285I CGRYCG 2 cut(s) 175, 330
BshFI GGCC 4 cut(s) 322, 329, 500, 669
BsiEI CGRYCG 2 cut(s) 175, 330
BsiHKAI GWGCWC 1 cut(s) 568
BsiHKCI CYCGRG 1 cut(s) 618
BsiSI CCGG 4 cut(s) 319, 326, 330, 596
BslFI GGGAC 1 cut(s) 637
BslI CCNNNNNNNGG 8 cut(s) 262, 300, 325, 329, 346, 416, 443, 899
BsmAI GTCTC 2 cut(s) 260, 1085
BsmBI CGTCTC 1 cut(s) 260
BsmFI GGGAC 1 cut(s) 637
BsnI GGCC 4 cut(s) 322, 329, 500, 669
BsoBI CYCGRG 1 cut(s) 618
Bsp1286I GDGCHC 2 cut(s) 353, 568
Bsp13I TCCGGA 1 cut(s) 595
Bsp143I GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
BspACI CCGC 6 cut(s) 5, 46, 160, 223, 735, 893
BspANI GGCC 4 cut(s) 322, 329, 500, 669
BspEI TCCGGA 1 cut(s) 595
BspFNI CGCG 3 cut(s) 11, 225, 735
BspHI TCATGA 1 cut(s) 834
BspLI GGNNCC 4 cut(s) 352, 407, 625, 626
BspMI ACCTGC 2 cut(s) 89, 348
BspTI CTTAAG 1 cut(s) 1070
BsrFI RCCGGY 2 cut(s) 325, 329
BsrI ACTGG 2 cut(s) 351, 421
BssAI RCCGGY 2 cut(s) 325, 329
BssECI CCNNGG 2 cut(s) 442, 617
BssMI GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
BssNI GRCGYC 1 cut(s) 272
BssSI CACGAG 1 cut(s) 153
Bst2BI CACGAG 1 cut(s) 153
Bst2UI CCWGG 2 cut(s) 403, 444
Bst4CI ACNGT 3 cut(s) 287, 362, 818
Bst6I CTCTTC 1 cut(s) 1023
BstACI GRCGYC 1 cut(s) 272
BstAFI CTTAAG 1 cut(s) 1070
BstC8I GCNNGC 1 cut(s) 50
BstDEI CTNAG 1 cut(s) 867
BstENI CCTNNNNNAGG 1 cut(s) 441
BstF5I GGATG 3 cut(s) 198, 202, 410
BstFNI CGCG 3 cut(s) 11, 225, 735
BstKTI GATC 6 cut(s) 175, 460, 535, 658, 811, 1069
BstMAI GTCTC 2 cut(s) 260, 1085
BstMBI GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
BstMCI CGRYCG 2 cut(s) 175, 330
BstMWI GCNNNNNNNGC 2 cut(s) 222, 901
BstNI CCWGG 2 cut(s) 403, 444
BstNSI RCATGY 1 cut(s) 1048
BstSCI CCNGG 2 cut(s) 401, 442
BstUI CGCG 3 cut(s) 11, 225, 735
BstZI CGGCCG 1 cut(s) 327
BsuI GTATCC 2 cut(s) 275, 321
BsuRI GGCC 4 cut(s) 322, 329, 500, 669
BtrI CACGTC 1 cut(s) 997
BtsCI GGATG 3 cut(s) 198, 202, 410
BtsI GCAGTG 1 cut(s) 713
BtsIMutI CAGTG 3 cut(s) 414, 713, 752
BveI ACCTGC 2 cut(s) 89, 348
Cac8I GCNNGC 1 cut(s) 50
CciI TCATGA 1 cut(s) 834
Cfr10I RCCGGY 2 cut(s) 325, 329
Cfr13I GGNCC 1 cut(s) 624
CseI GACGC 1 cut(s) 17
Csp6I GTAC 1 cut(s) 544
CviAII CATG 7 cut(s) 31, 573, 603, 673, 835, 861, 1045
CviQI GTAC 1 cut(s) 544
DdeI CTNAG 1 cut(s) 867
DpnI GATC 6 cut(s) 174, 459, 534, 657, 810, 1068
DpnII GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
DraI TTTAAA 1 cut(s) 741
EaeI YGGCCR 3 cut(s) 320, 327, 498
EagI CGGCCG 1 cut(s) 327
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
EciI GGCGGA 2 cut(s) 20, 882
Ecl136II GAGCTC 1 cut(s) 566
EclXI CGGCCG 1 cut(s) 327
Eco24I GRGCYC 2 cut(s) 353, 568
Eco47I GGWCC 1 cut(s) 624
Eco52I CGGCCG 1 cut(s) 327
Eco53kI GAGCTC 1 cut(s) 566
Eco88I CYCGRG 1 cut(s) 618
EcoICRI GAGCTC 1 cut(s) 566
EcoNI CCTNNNNNAGG 1 cut(s) 441
EcoO109I RGGNCCY 1 cut(s) 624
EcoRII CCWGG 2 cut(s) 401, 442
EcoT38I GRGCYC 2 cut(s) 353, 568
Esp3I CGTCTC 1 cut(s) 260
FaeI CATG 7 cut(s) 34, 576, 606, 676, 838, 864, 1048
FaqI GGGAC 1 cut(s) 637
FatI CATG 7 cut(s) 30, 572, 602, 672, 834, 860, 1044
FbaI TGATCA 2 cut(s) 457, 655
FokI GGATG 3 cut(s) 185, 189, 397
FriOI GRGCYC 2 cut(s) 353, 568
FspBI CTAG 1 cut(s) 939
HaeIII GGCC 4 cut(s) 322, 329, 500, 669
HapII CCGG 4 cut(s) 319, 326, 330, 596
HgaI GACGC 1 cut(s) 17
Hin1I GRCGYC 1 cut(s) 272
Hin1II CATG 7 cut(s) 34, 576, 606, 676, 838, 864, 1048
HincII GTYRAC 1 cut(s) 976
HindII GTYRAC 1 cut(s) 976
HpaII CCGG 4 cut(s) 319, 326, 330, 596
HphI GGTGA 2 cut(s) 70, 458
Hpy166II GTNNAC 1 cut(s) 976
Hpy188I TCNGA 5 cut(s) 74, 118, 532, 537, 704
Hpy188III TCNNGA 7 cut(s) 155, 561, 596, 659, 812, 835, 1088
Hpy8I GTNNAC 1 cut(s) 976
Hpy99I CGWCG 4 cut(s) 274, 277, 562, 998
HpyAV CCTTC 3 cut(s) 294, 832, 964
HpyCH4III ACNGT 3 cut(s) 287, 362, 818
HpyCH4IV ACGT 2 cut(s) 272, 996
HpyF10VI GCNNNNNNNGC 2 cut(s) 222, 901
HpyF3I CTNAG 1 cut(s) 867
HpySE526I ACGT 2 cut(s) 272, 996
Hsp92I GRCGYC 1 cut(s) 272
Hsp92II CATG 7 cut(s) 34, 576, 606, 676, 838, 864, 1048
KflI GGGWCCC 1 cut(s) 624
Kpn2I TCCGGA 1 cut(s) 595
Ksp22I TGATCA 2 cut(s) 457, 655
Kzo9I GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
LmnI GCTCC 1 cut(s) 356
MaeI CTAG 1 cut(s) 939
MaeII ACGT 2 cut(s) 272, 996
MaeIII GTNAC 3 cut(s) 155, 812, 911
MalI GATC 6 cut(s) 174, 459, 534, 657, 810, 1068
MboI GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
MboII GAAGA 3 cut(s) 35, 1010, 1040
MhlI GDGCHC 2 cut(s) 353, 568
MluCI AATT 7 cut(s) 125, 140, 234, 431, 722, 754, 985
MlyI GAGTC 5 cut(s) 174, 221, 228, 532, 851
MmeI TCCRAC 1 cut(s) 141
MroI TCCGGA 1 cut(s) 595
MroXI GAANNNNTTC 1 cut(s) 392
MseI TTAA 4 cut(s) 68, 740, 876, 1071
MslI CAYNNNNRTG 1 cut(s) 1049
MspCI CTTAAG 1 cut(s) 1070
MspI CCGG 4 cut(s) 319, 326, 330, 596
MspR9I CCNGG 2 cut(s) 403, 444
MvaI CCWGG 2 cut(s) 403, 444
MvnI CGCG 3 cut(s) 11, 225, 735
MwoI GCNNNNNNNGC 2 cut(s) 222, 901
NdeII GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
NlaIII CATG 7 cut(s) 34, 576, 606, 676, 838, 864, 1048
NlaIV GGNNCC 4 cut(s) 352, 407, 625, 626
NmeAIII GCCGAG 1 cut(s) 242
NmuCI GTSAC 2 cut(s) 155, 812
NspI RCATGY 1 cut(s) 1048
PagI TCATGA 1 cut(s) 834
PaqCI CACCTGC 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 7 cut(s) 75, 251, 420, 592, 599, 1015, 1078
PflFI GACNNNGTC 1 cut(s) 271
PflMI CCANNNNNTGG 1 cut(s) 416
Ple19I CGATCG 1 cut(s) 175
PleI GAGTC 5 cut(s) 174, 221, 227, 532, 851
PpsI GAGTC 5 cut(s) 174, 221, 227, 532, 851
PpuMI RGGWCCY 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 568
Psp5II RGGWCCY 1 cut(s) 624
Psp6I CCWGG 2 cut(s) 401, 442
PspGI CCWGG 2 cut(s) 401, 442
PspN4I GGNNCC 4 cut(s) 352, 407, 625, 626
PspPI GGNCC 1 cut(s) 624
PspPPI RGGWCCY 1 cut(s) 624
PsyI GACNNNGTC 1 cut(s) 271
PvuI CGATCG 1 cut(s) 175
RsaI GTAC 1 cut(s) 545
RsaNI GTAC 1 cut(s) 544
RseI CAYNNNNRTG 1 cut(s) 1049
SacI GAGCTC 1 cut(s) 568
SaqAI TTAA 4 cut(s) 68, 740, 876, 1071
Sau3AI GATC 6 cut(s) 172, 457, 532, 655, 808, 1066
Sau96I GGNCC 1 cut(s) 624
SchI GAGTC 5 cut(s) 174, 221, 228, 532, 851
ScrFI CCNGG 2 cut(s) 403, 444
SduI GDGCHC 2 cut(s) 353, 568
SinI GGWCC 1 cut(s) 624
SmiMI CAYNNNNRTG 1 cut(s) 1049
SmlI CTYRAG 2 cut(s) 584, 1070
SmoI CTYRAG 2 cut(s) 584, 1070
SpeI ACTAGT 1 cut(s) 938
Sse9I AATT 7 cut(s) 125, 140, 234, 431, 722, 754, 985
SsiI CCGC 6 cut(s) 5, 46, 160, 223, 735, 893
SspI AATATT 1 cut(s) 467
SspMI CTAG 1 cut(s) 939
SstI GAGCTC 1 cut(s) 568
StyD4I CCNGG 2 cut(s) 401, 442
TaaI ACNGT 3 cut(s) 287, 362, 818
TaiI ACGT 2 cut(s) 275, 999
TaqI TCGA 4 cut(s) 171, 249, 560, 726
TasI AATT 7 cut(s) 125, 140, 234, 431, 722, 754, 985
TfiI GAWTC 7 cut(s) 75, 251, 420, 592, 599, 1015, 1078
Tru1I TTAA 4 cut(s) 68, 740, 876, 1071
Tru9I TTAA 4 cut(s) 68, 740, 876, 1071
TscAI CASTG 3 cut(s) 421, 720, 752
TseFI GTSAC 2 cut(s) 155, 812
Tsp45I GTSAC 2 cut(s) 155, 812
TspDTI ATGAA 3 cut(s) 635, 744, 851
TspGWI ACGGA 3 cut(s) 283, 464, 930
TspRI CASTG 3 cut(s) 421, 720, 752
Tth111I GACNNNGTC 1 cut(s) 271
Van91I CCANNNNNTGG 1 cut(s) 416
Vha464I CTTAAG 1 cut(s) 1070
VpaK11BI GGWCC 1 cut(s) 624
XagI CCTNNNNNAGG 1 cut(s) 441
XapI RAATTY 3 cut(s) 125, 722, 754
XceI RCATGY 1 cut(s) 1048
XcmI CCANNNNNNNNNTGG 1 cut(s) 903
XmnI GAANNNNTTC 1 cut(s) 392
XspI CTAG 1 cut(s) 939
ZraI GACGTC 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.