RchiOBHm_Chr2g0107811

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19402643 .. 19406103
3461 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48181

Sequence Viewer

Length: 1167 bp
ATGGCAGAAACAGAAGACCTACCTGAAGATATTATAGTGAACATCTTCTCTAGATTGCCCGTGAAGTCTTTAATCCGATTCACCTCCGTTTCAAAACGTCTGCGTTTCATTATATTGTCCGATCCCAAATTCGCCCAATCCCAATTAAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTCCACCGACACTTCTCAACTCGAATCCCTACACTTGGGTGATACGCCGTCGTTTGGAGAGCCTTCATCAGTTAGAAAGCTCAGCTTCCCTTTCCAGCCACAACTGGGCGGTTATGTCAAGCTGCTGGGCTCCTGCAATGGTCTTGTATTTCTAGCTGTTGATAATAAATTATTTTTTATCTGGAACCCATCCATTGGGTTCTTGAAGCAATTACCTGATCCAGGTTTTCCCTTAGATGATAATGTGCTACCCTATTATGGTGTTGCCTATTTATCCGCCACCGATGACTACAAAGTTTTGGTAGCCTCCTTTGGCTTTGGTGGAGCCAAGTTAGAGGTCGAGATGTTCTCATTGAGAACTCACATTTGGCAGAGGATTGAATCCCCTTGCCGCTCAGATGATGTTCTACTCTTTCATTGTCAGGGGACTCTCTTGAATGATGCATTTCATTGGGTAAACTACCACGACTACAACGAGGAAGAGGAGCATGAAATAGTTTCTTTTGACTTGGAAGACGAGGTGTTCCGGAGAATGCCACTGCCTAATTTCGACCATGATGCTAAGACTTTCAGCAAGCTCGGGGTTTGTGGAGGGTGCCTGTGTGTGTCGCGTTATCCCTATGGTGTTTGGTACTCTATTGATTTCTGGGTCATGAGAGAATATGGCGTCAGTGGCTCATGGATTATGCTTTTTAGCTTAAAGCTCTCTGATCCACCTCATTTGCCTCGTTTTTCTAGACAATTATTGGTTGTGGAAAGTAGTACAGTTTCCGCGCGTTGGACTGCCGAGGGGTTCGAGTTGATAAGGATTTATCATAAAGAAGACAACCAGCTTGGGCGGTATATGCTTAAGGGGCATCGGATTTCTATGATTGAATATGAAGAAAGTCTACTTTGGATTAGTGGTTATCATCCAGTAGAAGAGAAAGAGCAGGTCCAGATACTCGAAACCCATCAGAAGGCATCAGGAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

388

Amino Acids

44.56

Weight (kDa)

5.68

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 5.7e-08 F-box-like
F-box PF00646 6 - 43 6.3e-10 F-box domain
FBA_3 PF08268 87 - 285 2.8e-10 F-box associated beta propeller domain
FBA_1 PF07734 107 - 321 4.3e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1114
AccB1I GGYRCC 1 cut(s) 786
AccB7I CCANNNNNTGG 1 cut(s) 386
AccBSI CCGCTC 1 cut(s) 585
AccI GTMKAC 1 cut(s) 1081
AccII CGCG 3 cut(s) 802, 965, 967
AccIII TCCGGA 1 cut(s) 717
AciI CCGC 6 cut(s) 178, 300, 468, 583, 963, 1030
AclWI GGATC 3 cut(s) 116, 404, 896
AcsI RAATTY 1 cut(s) 128
AcuI CTGAAG 1 cut(s) 45
AcyI GRCGYC 1 cut(s) 858
AfaI GTAC 2 cut(s) 824, 955
AfiI CCNNNNNNNGG 8 cut(s) 226, 245, 296, 386, 413, 449, 969, 1150
AflII CTTAAG 1 cut(s) 1040
AgsI TTSAA 5 cut(s) 93, 397, 572, 628, 1067
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 412
AjuI GAANNNNNNNTTGG 2 cut(s) 541, 573
AleI CACNNNNGTG 1 cut(s) 228
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 3 cut(s) 116, 404, 896
Ama87I CYCGRG 1 cut(s) 770
Aor13HI TCCGGA 1 cut(s) 717
ApeKI GCWGC 2 cut(s) 152, 313
ApoI RAATTY 1 cut(s) 128
Asp700I GAANNNNTTC 1 cut(s) 44
AspLEI GCGC 1 cut(s) 967
AspS9I GGNCC 1 cut(s) 1126
AsuHPI GGTGA 2 cut(s) 73, 242
AvaI CYCGRG 1 cut(s) 770
AvaII GGWCC 1 cut(s) 1126
BanI GGYRCC 1 cut(s) 786
BanII GRGCYC 1 cut(s) 323
BarI GAAGNNNNNNTAC 2 cut(s) 1065, 1097
BbsI GAAGAC 3 cut(s) 21, 711, 1020
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 2 cut(s) 164, 300
BccI CCATC 2 cut(s) 388, 1152
BceAI ACGGC 1 cut(s) 223
BcgI CGANNNNNNTGC 4 cut(s) 169, 203, 731, 765
BciT130I CCWGG 1 cut(s) 414
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 3 cut(s) 51, 344, 927
BfrI CTTAAG 1 cut(s) 1040
BfuAI ACCTGC 1 cut(s) 1114
BisI GCNGC 4 cut(s) 153, 178, 314, 583
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 4 cut(s) 154, 179, 315, 584
Bme1390I CCNGG 1 cut(s) 414
Bme18I GGWCC 1 cut(s) 1126
BmeRI GACNNNNNGTC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 770
BmgT120I GGNCC 1 cut(s) 1126
BmiI GGNNCC 4 cut(s) 322, 377, 517, 788
BmrFI CCNGG 1 cut(s) 414
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 4 cut(s) 622, 739, 1057, 1163
BmuI ACTGGG 1 cut(s) 305
BpiI GAAGAC 3 cut(s) 21, 711, 1020
BplI GAGNNNNNCTC 2 cut(s) 524, 556
Bpu10I CCTNAGC 1 cut(s) 173
Bpu1102I GCTNAGC 1 cut(s) 272
BsaHI GRCGYC 1 cut(s) 858
BsaJI CCNNGG 1 cut(s) 978
BsaWI WCCGGW 1 cut(s) 717
Bsc4I CCNNNNNNNGG 8 cut(s) 226, 245, 296, 386, 413, 449, 969, 1150
Bse1I ACTGG 2 cut(s) 300, 1106
Bse3DI GCAATG 1 cut(s) 334
BseAI TCCGGA 1 cut(s) 717
BseBI CCWGG 1 cut(s) 414
BseDI CCNNGG 1 cut(s) 978
BseGI GGATG 2 cut(s) 380, 1102
BseLI CCNNNNNNNGG 8 cut(s) 226, 245, 296, 386, 413, 449, 969, 1150
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 3 cut(s) 187, 286, 600
BseNI ACTGG 2 cut(s) 300, 1106
BseRI GAGGAG 2 cut(s) 176, 689
BseXI GCAGC 2 cut(s) 164, 300
BseYI CCCAGC 1 cut(s) 316
Bsh1236I CGCG 3 cut(s) 802, 965, 967
BshNI GGYRCC 1 cut(s) 786
BsiHKCI CYCGRG 1 cut(s) 770
BsiSI CCGG 1 cut(s) 718
BslFI GGGAC 1 cut(s) 631
BslI CCNNNNNNNGG 8 cut(s) 226, 245, 296, 386, 413, 449, 969, 1150
BsmAI GTCTC 1 cut(s) 196
BsmBI CGTCTC 1 cut(s) 196
BsmFI GGGAC 1 cut(s) 631
BsmI GAATGC 1 cut(s) 729
BsoBI CYCGRG 1 cut(s) 770
Bsp1286I GDGCHC 1 cut(s) 323
Bsp13I TCCGGA 1 cut(s) 717
Bsp143I GATC 3 cut(s) 121, 409, 901
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 6 cut(s) 178, 300, 468, 583, 963, 1030
BspCNI CTCAG 3 cut(s) 186, 285, 599
BspEI TCCGGA 1 cut(s) 717
BspFNI CGCG 3 cut(s) 802, 965, 967
BspHI TCATGA 1 cut(s) 843
BspLI GGNNCC 4 cut(s) 322, 377, 517, 788
BspMI ACCTGC 1 cut(s) 1114
BspPI GGATC 3 cut(s) 116, 404, 896
BspT107I GGYRCC 1 cut(s) 786
BspTI CTTAAG 1 cut(s) 1040
BsrBI CCGCTC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 334
BsrI ACTGG 2 cut(s) 300, 1106
BssECI CCNNGG 1 cut(s) 978
BssMI GATC 3 cut(s) 121, 409, 901
BssNI GRCGYC 1 cut(s) 858
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 1 cut(s) 958
Bst6I CTCTTC 2 cut(s) 666, 1107
BstACI GRCGYC 1 cut(s) 858
BstAFI CTTAAG 1 cut(s) 1040
BstC8I GCNNGC 1 cut(s) 767
BstDEI CTNAG 5 cut(s) 173, 272, 424, 586, 753
BstENI CCTNNNNNAGG 1 cut(s) 411
BstF5I GGATG 2 cut(s) 380, 1102
BstFNI CGCG 3 cut(s) 802, 965, 967
BstHHI GCGC 1 cut(s) 967
BstKTI GATC 3 cut(s) 124, 412, 904
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 3 cut(s) 121, 409, 901
BstMWI GCNNNNNNNGC 3 cut(s) 864, 1036, 1045
BstNI CCWGG 1 cut(s) 414
BstSCI CCNGG 1 cut(s) 412
BstUI CGCG 3 cut(s) 802, 965, 967
BstV1I GCAGC 2 cut(s) 164, 300
BstV2I GAAGAC 3 cut(s) 21, 711, 1020
BtsCI GGATG 2 cut(s) 380, 1102
BtsI GCAGTG 1 cut(s) 728
BtsIMutI CAGTG 2 cut(s) 728, 868
BveI ACCTGC 1 cut(s) 1114
Cac8I GCNNGC 1 cut(s) 767
CciI TCATGA 1 cut(s) 843
CfoI GCGC 1 cut(s) 967
Cfr13I GGNCC 1 cut(s) 1126
CseI GACGC 1 cut(s) 847
Csp6I GTAC 2 cut(s) 823, 954
CspCI CAANNNNNGTGG 2 cut(s) 894, 929
CviAII CATG 4 cut(s) 680, 746, 844, 870
CviQI GTAC 2 cut(s) 823, 954
DdeI CTNAG 5 cut(s) 173, 272, 424, 586, 753
DpnI GATC 3 cut(s) 123, 411, 903
DpnII GATC 3 cut(s) 121, 409, 901
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 2 cut(s) 666, 1107
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 2 cut(s) 666, 1107
EciI GGCGGA 1 cut(s) 457
Eco24I GRGCYC 1 cut(s) 323
Eco47I GGWCC 1 cut(s) 1126
Eco57I CTGAAG 1 cut(s) 45
Eco88I CYCGRG 1 cut(s) 770
EcoNI CCTNNNNNAGG 1 cut(s) 411
EcoRII CCWGG 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 637
EcoT38I GRGCYC 1 cut(s) 323
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 4 cut(s) 683, 749, 847, 873
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 1 cut(s) 631
FatI CATG 4 cut(s) 679, 745, 843, 869
FblI GTMKAC 1 cut(s) 1081
Fnu4HI GCNGC 4 cut(s) 153, 178, 314, 583
FokI GGATG 2 cut(s) 367, 1089
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 4 cut(s) 153, 178, 314, 583
FspBI CTAG 3 cut(s) 51, 344, 927
GlaI GCGC 1 cut(s) 966
GluI GCNGC 4 cut(s) 153, 178, 314, 583
GsaI CCCAGC 1 cut(s) 320
HapII CCGG 1 cut(s) 718
HgaI GACGC 1 cut(s) 847
HhaI GCGC 1 cut(s) 967
Hin1I GRCGYC 1 cut(s) 858
Hin1II CATG 4 cut(s) 683, 749, 847, 873
Hin6I GCGC 1 cut(s) 965
HinP1I GCGC 1 cut(s) 965
HinfI GANTC 5 cut(s) 78, 183, 215, 572, 619
HpaII CCGG 1 cut(s) 718
HphI GGTGA 2 cut(s) 73, 242
Hpy166II GTNNAC 3 cut(s) 40, 649, 1082
Hpy188I TCNGA 6 cut(s) 77, 121, 589, 901, 1053, 1149
Hpy8I GTNNAC 3 cut(s) 40, 649, 1082
Hpy99I CGWCG 1 cut(s) 244
HpyAV CCTTC 2 cut(s) 264, 1144
HpyCH4III ACNGT 1 cut(s) 958
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 2 cut(s) 327, 635
HpyF10VI GCNNNNNNNGC 3 cut(s) 864, 1036, 1045
HpyF3I CTNAG 5 cut(s) 173, 272, 424, 586, 753
HpySE526I ACGT 1 cut(s) 97
Hsp92I GRCGYC 1 cut(s) 858
Hsp92II CATG 4 cut(s) 683, 749, 847, 873
HspAI GCGC 1 cut(s) 965
Kpn2I TCCGGA 1 cut(s) 717
Kzo9I GATC 3 cut(s) 121, 409, 901
LmnI GCTCC 3 cut(s) 326, 515, 676
Lsp1109I GCAGC 2 cut(s) 164, 300
LweI GCATC 4 cut(s) 622, 739, 1057, 1163
MaeI CTAG 3 cut(s) 51, 344, 927
MaeII ACGT 1 cut(s) 97
MalI GATC 3 cut(s) 123, 411, 903
MbiI CCGCTC 1 cut(s) 585
MboI GATC 3 cut(s) 121, 409, 901
MboII GAAGA 8 cut(s) 26, 37, 38, 683, 716, 1025, 1085, 1124
MhlI GDGCHC 1 cut(s) 323
MluCI AATT 6 cut(s) 128, 143, 359, 401, 736, 932
MlyI GAGTC 2 cut(s) 177, 613
MmeI TCCRAC 1 cut(s) 950
Mph1103I ATGCAT 1 cut(s) 637
MroI TCCGGA 1 cut(s) 717
MroXI GAANNNNTTC 1 cut(s) 44
MseI TTAA 4 cut(s) 71, 146, 890, 1041
MslI CAYNNNNRTG 1 cut(s) 228
MspCI CTTAAG 1 cut(s) 1040
MspI CCGG 1 cut(s) 718
MspR9I CCNGG 1 cut(s) 414
Mva1269I GAATGC 1 cut(s) 729
MvaI CCWGG 1 cut(s) 414
MvnI CGCG 3 cut(s) 802, 965, 967
MwoI GCNNNNNNNGC 3 cut(s) 864, 1036, 1045
NdeII GATC 3 cut(s) 121, 409, 901
NlaIII CATG 4 cut(s) 683, 749, 847, 873
NlaIV GGNNCC 4 cut(s) 322, 377, 517, 788
NmeAIII GCCGAG 1 cut(s) 1003
NsiI ATGCAT 1 cut(s) 637
OliI CACNNNNGTG 1 cut(s) 228
PagI TCATGA 1 cut(s) 843
PcsI WCGNNNNNNNCGW 2 cut(s) 195, 663
PctI GAATGC 1 cut(s) 729
PdmI GAANNNNTTC 1 cut(s) 44
PfeI GAWTC 3 cut(s) 78, 215, 572
PflMI CCANNNNNTGG 1 cut(s) 386
PkrI GCNGC 4 cut(s) 154, 179, 315, 584
PleI GAGTC 2 cut(s) 177, 613
PpsI GAGTC 2 cut(s) 177, 613
Psp6I CCWGG 1 cut(s) 412
PspFI CCCAGC 1 cut(s) 316
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 4 cut(s) 322, 377, 517, 788
PspPI GGNCC 1 cut(s) 1126
RsaI GTAC 2 cut(s) 824, 955
RsaNI GTAC 2 cut(s) 823, 954
RseI CAYNNNNRTG 1 cut(s) 228
SaqAI TTAA 4 cut(s) 71, 146, 890, 1041
SatI GCNGC 4 cut(s) 153, 178, 314, 583
Sau3AI GATC 3 cut(s) 121, 409, 901
Sau96I GGNCC 1 cut(s) 1126
SchI GAGTC 2 cut(s) 177, 613
ScrFI CCNGG 1 cut(s) 414
SduI GDGCHC 1 cut(s) 323
SfaNI GCATC 4 cut(s) 622, 739, 1057, 1163
SinI GGWCC 1 cut(s) 1126
SmiMI CAYNNNNRTG 1 cut(s) 228
SmlI CTYRAG 1 cut(s) 1040
SmoI CTYRAG 1 cut(s) 1040
Sse9I AATT 6 cut(s) 128, 143, 359, 401, 736, 932
SsiI CCGC 6 cut(s) 178, 300, 468, 583, 963, 1030
SspMI CTAG 3 cut(s) 51, 344, 927
StyD4I CCNGG 1 cut(s) 412
TaaI ACNGT 1 cut(s) 958
TaiI ACGT 1 cut(s) 100
TaqI TCGA 5 cut(s) 213, 531, 741, 987, 1137
TasI AATT 6 cut(s) 128, 143, 359, 401, 736, 932
TatI WGTACW 1 cut(s) 953
TauI GCSGC 2 cut(s) 180, 585
TfiI GAWTC 3 cut(s) 78, 215, 572
Tru1I TTAA 4 cut(s) 71, 146, 890, 1041
Tru9I TTAA 4 cut(s) 71, 146, 890, 1041
TscAI CASTG 2 cut(s) 735, 868
TseI GCWGC 2 cut(s) 152, 313
TspDTI ATGAA 6 cut(s) 97, 246, 596, 629, 696, 1086
TspGWI ACGGA 1 cut(s) 76
TspRI CASTG 2 cut(s) 735, 868
Van91I CCANNNNNTGG 1 cut(s) 386
Vha464I CTTAAG 1 cut(s) 1040
VpaK11BI GGWCC 1 cut(s) 1126
XagI CCTNNNNNAGG 1 cut(s) 411
XapI RAATTY 1 cut(s) 128
XbaI TCTAGA 2 cut(s) 50, 926
XmiI GTMKAC 1 cut(s) 1081
XmnI GAANNNNTTC 1 cut(s) 44
XspI CTAG 3 cut(s) 51, 344, 927
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.