Rroxscaffold_4G00277310

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000082
Physical Location & Seq
Forward (+)
783818 .. 784969
1152 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00277310.1

Sequence Viewer

Length: 1152 bp
ATGGCAGAAAATTTCCTACCGGAAGATATGATTGTGGAAATACTTCACAGGGTTCCCTTGAAACCCTTAGTCCGATTCAGCACTGTTTCAAAACGGTGGCATTCCATTATATGTGCCGACACACAACTCAAGAAATCCTATATGAAATTAGCATCCGGGAAGCAAACCCTCAGTCGTAGACTCCTCCTCTCCACCGGTACCGGTCACTCACAAGTTGAATCCTTGGACTTGGAGACGCCGTCATTTGGAGTCACAAAAGTAAGCTGCCCATTCAATAAACGTGGGTATCGTGTCAAGCTACTAGGCTCCTGCAATGGGTTGGTATGTGTAGCTCTTGTCTTTGATATTTGGAACCCAGGTCTTGAGTCTATCCACAATTTGTATATTTGGAACCCATCAAAAGGATTCTACCAAAAATTACACGACCCTGGTTTTTCCCTAGAAGATGGTGTCGTGCTTTACTCTGGTTTTGGCCATTTGTCAGCTACAGACGACTACAAAGTTTTTGTGGCCACTGGTAGGAGCAATTGGGTGGGGATCAGCAGATGGTGTGAGATGAAGAAGGTCAAGATATTCTCATTGAGGAGTAAGTTATGGAAAAGGATTGAACTCCCTCCAGACTTTTTCTTCACGCGTCGGGGGACTCTCTGCAATGAGGCCCTTCATTGGATGCTCTATCCCTCTGAATCAGGAGGCATAGATCATATCGTTGCATTTGATTTGGCCAAGGAAGACTTCAGCAGGCAAATCCCGCTGCCTGACTCTCTCATGGAAGGCCGGGACTGTGTCGTAGACCTTGGCATTTATTCCGAAGGATGCCTGTGTGTCGTGTCTAGTTCCAGCAAAGACTCTATTGATTTGTGGGTGATGAGAGAATATGGCGTGCGTGACTCCTGGACTAAGCACTTTAACTTTACGATTACCAACCCGCCGCGTGACACGTATAAGTTTGACACATCAATCATGGTTACGGAGGAGGGTACACTTTTTGTAGTTATATACGGTTGGCCTACCTGGGATAACAGGTTACTCTTGAAGATTGATCATAAACAACGTACACTGGACCAATATAAATTGCCAGAGGGTTACGTGATTGATACCATAATTCAAAATGAAGAGATGGAATATGAAGAGAGCCCACTTTGGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

383

Amino Acids

44.06

Weight (kDa)

6.38

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 38 1.2e-08 F-box domain
F-box-like PF12937 6 - 43 1.4e-06 F-box-like
FBA_1 PF07734 80 - 334 2.2e-19 F-box associated beta propeller domain
FBA_3 PF08268 83 - 332 3.9e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 197
AccI GTMKAC 2 cut(s) 178, 792
AccII CGCG 2 cut(s) 634, 934
AciI CCGC 3 cut(s) 752, 929, 932
AclWI GGATC 1 cut(s) 545
AcoI YGGCCR 3 cut(s) 472, 510, 723
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 1 cut(s) 721
AcyI GRCGYC 1 cut(s) 236
AfaI GTAC 3 cut(s) 199, 982, 1057
AfiI CCNNNNNNNGG 5 cut(s) 245, 315, 401, 519, 666
AflIII ACRYGT 2 cut(s) 632, 939
AgeI ACCGGT 2 cut(s) 194, 200
AgsI TTSAA 7 cut(s) 61, 90, 218, 274, 608, 1036, 1109
AjnI CCWGG 4 cut(s) 355, 427, 893, 1013
AjuI GAANNNNNNNTTGG 2 cut(s) 719, 751
AluBI AGCT 4 cut(s) 264, 298, 332, 485
AluI AGCT 4 cut(s) 264, 298, 332, 485
Alw26I GTCTC 1 cut(s) 227
AlwI GGATC 1 cut(s) 545
AoxI GGCC 6 cut(s) 472, 510, 657, 723, 775, 1007
ApeKI GCWGC 2 cut(s) 264, 754
ApoI RAATTY 1 cut(s) 10
ArsI GACNNNNNNTTYG 2 cut(s) 157, 189
AsiGI ACCGGT 2 cut(s) 194, 200
Asp700I GAANNNNTTC 1 cut(s) 42
Asp718I GGTACC 1 cut(s) 197
AspS9I GGNCC 2 cut(s) 658, 1063
AsuC2I CCSGG 2 cut(s) 157, 779
AsuHPI GGTGA 1 cut(s) 877
AvaII GGWCC 1 cut(s) 1063
BaeI ACNNNNGTAYC 2 cut(s) 269, 302
BalI TGGCCA 3 cut(s) 474, 512, 725
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 1139
BbsI GAAGAC 1 cut(s) 738
BbvI GCAGC 2 cut(s) 251, 741
BccI CCATC 4 cut(s) 403, 440, 540, 1114
BceAI ACGGC 1 cut(s) 223
BciT130I CCWGG 4 cut(s) 357, 429, 895, 1015
BclI TGATCA 1 cut(s) 1042
BcnI CCSGG 2 cut(s) 157, 779
BcoDI GTCTC 1 cut(s) 227
BfaI CTAG 3 cut(s) 302, 440, 834
BfmI CTRYAG 1 cut(s) 486
BisI GCNGC 3 cut(s) 265, 755, 932
BlsI GCNGC 3 cut(s) 266, 756, 933
Bme1390I CCNGG 6 cut(s) 157, 357, 429, 779, 895, 1015
Bme18I GGWCC 1 cut(s) 1063
BmgT120I GGNCC 2 cut(s) 658, 1063
BmiI GGNNCC 5 cut(s) 54, 199, 307, 353, 392
BmrFI CCNGG 6 cut(s) 157, 357, 429, 779, 895, 1015
BmsI GCATC 3 cut(s) 161, 660, 806
BpiI GAAGAC 1 cut(s) 738
BpmI CTGGAG 1 cut(s) 600
BpuEI CTTGAG 2 cut(s) 113, 383
BpuMI CCSGG 2 cut(s) 157, 779
BsaAI YACGTR 2 cut(s) 942, 1090
BsaHI GRCGYC 1 cut(s) 236
BsaJI CCNNGG 6 cut(s) 222, 355, 427, 726, 796, 1014
BsaWI WCCGGW 3 cut(s) 19, 194, 200
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 5 cut(s) 245, 315, 401, 519, 666
Bse118I RCCGGY 2 cut(s) 194, 200
Bse1I ACTGG 2 cut(s) 520, 1065
Bse3DI GCAATG 2 cut(s) 319, 658
BseBI CCWGG 4 cut(s) 357, 429, 895, 1015
BseDI CCNNGG 6 cut(s) 222, 355, 427, 726, 796, 1014
BseGI GGATG 3 cut(s) 152, 675, 821
BseLI CCNNNNNNNGG 5 cut(s) 245, 315, 401, 519, 666
BseMI GCAATG 2 cut(s) 319, 658
BseMII CTCAG 1 cut(s) 184
BseNI ACTGG 2 cut(s) 520, 1065
BseRI GAGGAG 4 cut(s) 173, 176, 598, 989
BseXI GCAGC 2 cut(s) 251, 741
Bsh1236I CGCG 2 cut(s) 634, 934
BshFI GGCC 6 cut(s) 474, 512, 659, 725, 777, 1009
BshNI GGYRCC 1 cut(s) 197
BshTI ACCGGT 2 cut(s) 194, 200
BsiSI CCGG 5 cut(s) 20, 156, 195, 201, 778
BslFI GGGAC 2 cut(s) 655, 794
BslI CCNNNNNNNGG 5 cut(s) 245, 315, 401, 519, 666
BsmAI GTCTC 1 cut(s) 227
BsmBI CGTCTC 1 cut(s) 227
BsmFI GGGAC 2 cut(s) 655, 794
BsmI GAATGC 1 cut(s) 100
BsnI GGCC 6 cut(s) 474, 512, 659, 725, 777, 1009
Bsp1286I GDGCHC 1 cut(s) 1139
Bsp143I GATC 3 cut(s) 537, 700, 1042
BspACI CCGC 3 cut(s) 752, 929, 932
BspANI GGCC 6 cut(s) 474, 512, 659, 725, 777, 1009
BspCNI CTCAG 1 cut(s) 183
BspFNI CGCG 2 cut(s) 634, 934
BspLI GGNNCC 5 cut(s) 54, 199, 307, 353, 392
BspPI GGATC 1 cut(s) 545
BspT107I GGYRCC 1 cut(s) 197
BsrDI GCAATG 2 cut(s) 319, 658
BsrFI RCCGGY 2 cut(s) 194, 200
BsrI ACTGG 2 cut(s) 520, 1065
BssAI RCCGGY 2 cut(s) 194, 200
BssECI CCNNGG 6 cut(s) 222, 355, 427, 726, 796, 1014
BssMI GATC 3 cut(s) 537, 700, 1042
BssNI GRCGYC 1 cut(s) 236
BssT1I CCWWGG 3 cut(s) 222, 726, 796
Bst2UI CCWGG 4 cut(s) 357, 429, 895, 1015
Bst4CI ACNGT 4 cut(s) 85, 96, 785, 1004
Bst6I CTCTTC 2 cut(s) 1110, 1125
BstACI GRCGYC 1 cut(s) 236
BstBAI YACGTR 2 cut(s) 942, 1090
BstC8I GCNNGC 2 cut(s) 743, 884
BstDEI CTNAG 3 cut(s) 67, 170, 900
BstF5I GGATG 3 cut(s) 152, 675, 821
BstFNI CGCG 2 cut(s) 634, 934
BstKTI GATC 3 cut(s) 540, 703, 1045
BstMAI GTCTC 1 cut(s) 227
BstMBI GATC 3 cut(s) 537, 700, 1042
BstMWI GCNNNNNNNGC 1 cut(s) 751
BstNI CCWGG 4 cut(s) 357, 429, 895, 1015
BstSCI CCNGG 6 cut(s) 155, 355, 427, 777, 893, 1013
BstSFI CTRYAG 1 cut(s) 486
BstUI CGCG 2 cut(s) 634, 934
BstV1I GCAGC 2 cut(s) 251, 741
BstV2I GAAGAC 1 cut(s) 738
BsuRI GGCC 6 cut(s) 474, 512, 659, 725, 777, 1009
BtsCI GGATG 3 cut(s) 152, 675, 821
BtsIMutI CAGTG 3 cut(s) 81, 513, 1058
Cac8I GCNNGC 2 cut(s) 743, 884
Cfr10I RCCGGY 2 cut(s) 194, 200
Cfr13I GGNCC 2 cut(s) 658, 1063
CseI GACGC 2 cut(s) 244, 623
Csp6I GTAC 3 cut(s) 198, 981, 1056
CspAI ACCGGT 2 cut(s) 194, 200
CspCI CAANNNNNGTGG 2 cut(s) 262, 297
CviAII CATG 2 cut(s) 769, 964
CviQI GTAC 3 cut(s) 198, 981, 1056
DdeI CTNAG 3 cut(s) 67, 170, 900
DpnI GATC 3 cut(s) 539, 702, 1044
DpnII GATC 3 cut(s) 537, 700, 1042
EaeI YGGCCR 3 cut(s) 472, 510, 723
Eam1104I CTCTTC 2 cut(s) 1110, 1125
EarI CTCTTC 2 cut(s) 1110, 1125
Eco130I CCWWGG 3 cut(s) 222, 726, 796
Eco24I GRGCYC 1 cut(s) 1139
Eco47I GGWCC 1 cut(s) 1063
Eco57I CTGAAG 1 cut(s) 721
EcoO109I RGGNCCY 1 cut(s) 658
EcoRII CCWGG 4 cut(s) 355, 427, 893, 1013
EcoT14I CCWWGG 3 cut(s) 222, 726, 796
EcoT38I GRGCYC 1 cut(s) 1139
ErhI CCWWGG 3 cut(s) 222, 726, 796
Esp3I CGTCTC 1 cut(s) 227
FaeI CATG 2 cut(s) 772, 967
FalI AAGNNNNNCTT 2 cut(s) 719, 751
FaqI GGGAC 2 cut(s) 655, 794
FatI CATG 2 cut(s) 768, 963
FauI CCCGC 2 cut(s) 759, 936
FbaI TGATCA 1 cut(s) 1042
FblI GTMKAC 2 cut(s) 178, 792
Fnu4HI GCNGC 3 cut(s) 265, 755, 932
FokI GGATG 3 cut(s) 139, 682, 828
FriOI GRGCYC 1 cut(s) 1139
Fsp4HI GCNGC 3 cut(s) 265, 755, 932
FspBI CTAG 3 cut(s) 302, 440, 834
GluI GCNGC 3 cut(s) 265, 755, 932
GsuI CTGGAG 1 cut(s) 600
HaeIII GGCC 6 cut(s) 474, 512, 659, 725, 777, 1009
HapII CCGG 5 cut(s) 20, 156, 195, 201, 778
HgaI GACGC 2 cut(s) 244, 623
Hin1I GRCGYC 1 cut(s) 236
Hin1II CATG 2 cut(s) 772, 967
HpaII CCGG 5 cut(s) 20, 156, 195, 201, 778
HphI GGTGA 1 cut(s) 877
Hpy166II GTNNAC 4 cut(s) 179, 793, 983, 1058
Hpy188I TCNGA 3 cut(s) 74, 685, 811
Hpy188III TCNNGA 6 cut(s) 130, 362, 568, 617, 690, 1033
Hpy8I GTNNAC 4 cut(s) 179, 793, 983, 1058
Hpy99I CGWCG 1 cut(s) 639
HpyAV CCTTC 4 cut(s) 556, 671, 767, 806
HpyCH4III ACNGT 4 cut(s) 85, 96, 785, 1004
HpyCH4IV ACGT 4 cut(s) 280, 941, 1054, 1089
HpyCH4V TGCA 3 cut(s) 312, 651, 713
HpyF10VI GCNNNNNNNGC 1 cut(s) 751
HpyF3I CTNAG 3 cut(s) 67, 170, 900
HpySE526I ACGT 4 cut(s) 280, 941, 1054, 1089
Hsp92I GRCGYC 1 cut(s) 236
Hsp92II CATG 2 cut(s) 772, 967
KpnI GGTACC 1 cut(s) 201
Ksp22I TGATCA 1 cut(s) 1042
Kzo9I GATC 3 cut(s) 537, 700, 1042
LmnI GCTCC 2 cut(s) 311, 522
Lsp1109I GCAGC 2 cut(s) 251, 741
LweI GCATC 3 cut(s) 161, 660, 806
MaeI CTAG 3 cut(s) 302, 440, 834
MaeII ACGT 4 cut(s) 280, 941, 1054, 1089
MaeIII GTNAC 7 cut(s) 203, 250, 887, 935, 967, 1026, 1085
MalI GATC 3 cut(s) 539, 702, 1044
MboI GATC 3 cut(s) 537, 700, 1042
MboII GAAGA 8 cut(s) 35, 455, 571, 619, 743, 1048, 1127, 1142
MfeI CAATTG 1 cut(s) 526
MhlI GDGCHC 1 cut(s) 1139
MlsI TGGCCA 3 cut(s) 474, 512, 725
MluCI AATT 7 cut(s) 10, 146, 376, 416, 526, 1073, 1104
MluI ACGCGT 1 cut(s) 632
MluNI TGGCCA 3 cut(s) 474, 512, 725
MlyI GAGTC 7 cut(s) 174, 258, 374, 637, 755, 842, 884
Mox20I TGGCCA 3 cut(s) 474, 512, 725
MroXI GAANNNNTTC 1 cut(s) 42
MscI TGGCCA 3 cut(s) 474, 512, 725
MseI TTAA 1 cut(s) 909
Msp20I TGGCCA 3 cut(s) 474, 512, 725
MspA1I CMGCKG 1 cut(s) 754
MspI CCGG 5 cut(s) 20, 156, 195, 201, 778
MspR9I CCNGG 6 cut(s) 157, 357, 429, 779, 895, 1015
MunI CAATTG 1 cut(s) 526
Mva1269I GAATGC 1 cut(s) 100
MvaI CCWGG 4 cut(s) 357, 429, 895, 1015
MvnI CGCG 2 cut(s) 634, 934
MwoI GCNNNNNNNGC 1 cut(s) 751
NciI CCSGG 2 cut(s) 157, 779
NdeII GATC 3 cut(s) 537, 700, 1042
NlaIII CATG 2 cut(s) 772, 967
NlaIV GGNNCC 5 cut(s) 54, 199, 307, 353, 392
NmuCI GTSAC 4 cut(s) 203, 250, 887, 935
PcsI WCGNNNNNNNCGW 1 cut(s) 286
PctI GAATGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 4 cut(s) 75, 218, 405, 686
PflFI GACNNNGTC 2 cut(s) 238, 785
PfoI TCCNGGA 2 cut(s) 155, 893
PinAI ACCGGT 2 cut(s) 194, 200
PkrI GCNGC 3 cut(s) 266, 756, 933
PleI GAGTC 7 cut(s) 174, 257, 373, 637, 755, 842, 884
PpsI GAGTC 7 cut(s) 174, 257, 373, 637, 755, 842, 884
Ppu21I YACGTR 2 cut(s) 942, 1090
Psp6I CCWGG 4 cut(s) 355, 427, 893, 1013
PspGI CCWGG 4 cut(s) 355, 427, 893, 1013
PspN4I GGNNCC 5 cut(s) 54, 199, 307, 353, 392
PspPI GGNCC 2 cut(s) 658, 1063
PsyI GACNNNGTC 2 cut(s) 238, 785
RsaI GTAC 3 cut(s) 199, 982, 1057
RsaNI GTAC 3 cut(s) 198, 981, 1056
SaqAI TTAA 1 cut(s) 909
SatI GCNGC 3 cut(s) 265, 755, 932
Sau3AI GATC 3 cut(s) 537, 700, 1042
Sau96I GGNCC 2 cut(s) 658, 1063
SchI GAGTC 7 cut(s) 174, 258, 374, 637, 755, 842, 884
ScrFI CCNGG 6 cut(s) 157, 357, 429, 779, 895, 1015
SduI GDGCHC 1 cut(s) 1139
SfaNI GCATC 3 cut(s) 161, 660, 806
SfcI CTRYAG 1 cut(s) 486
SinI GGWCC 1 cut(s) 1063
SmlI CTYRAG 2 cut(s) 128, 362
SmoI CTYRAG 2 cut(s) 128, 362
Sse9I AATT 7 cut(s) 10, 146, 376, 416, 526, 1073, 1104
SsiI CCGC 3 cut(s) 752, 929, 932
SspMI CTAG 3 cut(s) 302, 440, 834
StyD4I CCNGG 6 cut(s) 155, 355, 427, 777, 893, 1013
StyI CCWWGG 3 cut(s) 222, 726, 796
TaaI ACNGT 4 cut(s) 85, 96, 785, 1004
TaiI ACGT 4 cut(s) 283, 944, 1057, 1092
TasI AATT 7 cut(s) 10, 146, 376, 416, 526, 1073, 1104
TauI GCSGC 1 cut(s) 934
TfiI GAWTC 4 cut(s) 75, 218, 405, 686
Tru1I TTAA 1 cut(s) 909
Tru9I TTAA 1 cut(s) 909
TscAI CASTG 3 cut(s) 88, 520, 1065
TseFI GTSAC 4 cut(s) 203, 250, 887, 935
TseI GCWGC 2 cut(s) 264, 754
Tsp45I GTSAC 4 cut(s) 203, 250, 887, 935
TspDTI ATGAA 5 cut(s) 158, 572, 653, 1128, 1143
TspGWI ACGGA 1 cut(s) 986
TspRI CASTG 3 cut(s) 88, 520, 1065
Tth111I GACNNNGTC 2 cut(s) 238, 785
VpaK11BI GGWCC 1 cut(s) 1063
XapI RAATTY 1 cut(s) 10
XmiI GTMKAC 2 cut(s) 178, 792
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 3 cut(s) 302, 440, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.