FvH4_3g15782

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000082
Physical Location & Seq
Reverse (-)
9937116 .. 9938811
1696 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15782.t1

Sequence Viewer

Length: 1482 bp
ATGGCCGAAACTGACCTACCTGAAGATGTTATGGTGAATATTCTGTGTTGGTTGCCCGTGAAATCCTTGATCAGGTTCACCTCCGTTTTGAAACGAAGGTGTTTCATCATCTTATCAGACCCCAAATTCGCCGCATCTCAATTCAAAGCAGCTCGTCAGCAGAAAACCCTAGGTCGCAGACTCATTTTCTCCACCGACGCCCCTCAACTCGAATCAGTAGACTTGGATGATACACCACCGTATGGCAGAAAGCTCAGCTTCCCTTTCGAGCAAACGGAGGACATTGATGTCAAGCTACTCGGCTCCTGCAATGGGTTGGTGTTTGTAGCCGTTGATGATACCAACTTCTACATCTGGAATCCATCAACCGGAGTCTCCATGCAGTTCCCTGAGCCAGGTTTTTATGACGCTAAAGGACTTCAATGTTATGGTGTTGGCTATGTGTCTGCCACCGATGACTACAAAGTTTTCGCAGCTGCATACCACATGGAGGAAGAGGAAGATGTGATGAAGATGTTCTCGTTGAGAACCAACGTTTGGAAAGCAATCCAACATCCTGGTCAGGAAGCCGGTTCTACGGCAACACTTTTGAATTTGACACTTCATTGGGTGAGCTGGAAAGTAATTCTTGCTTTTGATTTGGCACAGGAGGAGTTCACGACTATGCGTCTGCCTGTTAATGCCCAACCAGATTATGATGTAGATATTTTCCCCGATCTTATTGGGGTCTCTAAGGGATGCCTGTGTATAAGTGTTCATGCGAGGAGAGTTGGTGGCTCTGTCGATTTCTGGGTCATGAGAGAGTATGGAGTCTATGACTCGTGGACTAGCTATACATATACTCCCGCCGACGGCCTAGGCCTGTACCTACGTTTCTTGGTCTTTGAAAGTTGTACAGTTGCTGTAAAAAAAGGTGGGAGTCATACCAGGTTGTTGTTGGTAAAGATTGATCAGGAACAAGAAACGGAACTTGGCATGTATATGCATCAAGGCTACTGGCATTACGGGTTTGACATGATTCCACATGAAGATAATCTACTTTGGATTACTGATGTGGCTGTACAAGAACAACGGAGTGTGTCAGCAACTGCAACTGGATCCACTGTTGGTGACTCGTCACCTCTTGATGATGGATTGCTTCCAAAGGAAGGGCCTGATCATGAGGATAAGTTCGAGTCTCTGGGTCTCCAAATCCAGCGTATCCCTTTAGAAGTTGAACCTGGAAGCCTACCTATGAGTCCATCATTAGCAGAAACAGAGTTCCACCTTGAAGATGATATCATGGAGGTTCCTAGTACTGTTGAGCACCAATACATACCAAGCTTCATAAGAGGTTCCCCACAACCTAAAATGAATCAGATGGATGGAACAGTTTCTGAGAATCTGCCGTCATTAAGGAATGGCTGCGACGAAGTTGTTTGTTTTTCGCTGCAGTTGGATAACAATGAGGCCAAGAGACGACGTTCGGATACTTCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

494

Amino Acids

55.49

Weight (kDa)

4.68

Isoelectric Point (pI)

53.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 88 - 280 2.3e-15 F-box associated beta propeller domain
FBA_3 PF08268 89 - 281 9.3e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 287
AccB7I CCANNNNNTGG 2 cut(s) 242, 537
AccI GTMKAC 1 cut(s) 219
AciI CCGC 2 cut(s) 132, 846
AclI AACGTT 1 cut(s) 534
AclWI GGATC 2 cut(s) 1092, 1105
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 125, 592
AcuI CTGAAG 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 4 cut(s) 866, 895, 1062, 1297
AfiI CCNNNNNNNGG 9 cut(s) 72, 242, 312, 368, 395, 490, 537, 851, 1148
AgsI TTSAA 8 cut(s) 91, 145, 422, 592, 887, 1217, 1271, 1476
AhdI GACNNNNNGTC 1 cut(s) 666
AjnI CCWGG 4 cut(s) 394, 556, 926, 1219
AjuI GAANNNNNNNTTGG 4 cut(s) 520, 552, 954, 986
AluBI AGCT 8 cut(s) 152, 253, 258, 295, 476, 615, 831, 1323
AluI AGCT 8 cut(s) 152, 253, 258, 295, 476, 615, 831, 1323
Alw21I GWGCWC 1 cut(s) 1308
Alw26I GTCTC 5 cut(s) 379, 733, 1182, 1190, 1450
AlwI GGATC 2 cut(s) 1092, 1105
AlwNI CAGNNNCTG 3 cut(s) 902, 1088, 1376
AoxI GGCC 5 cut(s) 3, 853, 859, 1151, 1449
ApeKI GCWGC 5 cut(s) 149, 473, 476, 1404, 1429
ApoI RAATTY 2 cut(s) 125, 592
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp700I GAANNNNTTC 2 cut(s) 515, 1372
AspA2I CCTAGG 2 cut(s) 169, 856
AspS9I GGNCC 1 cut(s) 1151
AsuHPI GGTGA 5 cut(s) 46, 70, 622, 1110, 1121
AvrII CCTAGG 2 cut(s) 169, 856
BamHI GGATCC 1 cut(s) 1097
BarI GAAGNNNNNNTAC 2 cut(s) 1020, 1052
BauI CACGAG 1 cut(s) 820
Bbv12I GWGCWC 1 cut(s) 1308
BbvI GCAGC 5 cut(s) 161, 463, 485, 1391, 1416
BccI CCATC 5 cut(s) 370, 1124, 1249, 1354, 1358
BceAI ACGGC 4 cut(s) 314, 594, 868, 1372
BciT130I CCWGG 4 cut(s) 396, 558, 928, 1221
BciVI GTATCC 2 cut(s) 1211, 1462
BclI TGATCA 3 cut(s) 69, 949, 1156
BcoDI GTCTC 5 cut(s) 379, 733, 1182, 1190, 1450
BfaI CTAG 4 cut(s) 170, 828, 857, 1293
BfmI CTRYAG 1 cut(s) 1430
BfuI GTATCC 2 cut(s) 1211, 1462
BisI GCNGC 6 cut(s) 132, 150, 474, 477, 1405, 1430
BlnI CCTAGG 2 cut(s) 169, 856
BlpI GCTNAGC 1 cut(s) 254
BlsI GCNGC 6 cut(s) 133, 151, 475, 478, 1406, 1431
BmcAI AGTACT 1 cut(s) 1297
Bme1390I CCNGG 4 cut(s) 396, 558, 928, 1221
BmeRI GACNNNNNGTC 1 cut(s) 666
BmgT120I GGNCC 1 cut(s) 1151
BmiI GGNNCC 4 cut(s) 304, 1099, 1290, 1336
BmrFI CCNGG 4 cut(s) 396, 558, 928, 1221
BmsI GCATC 3 cut(s) 143, 728, 994
Bpu10I CCTNAGC 1 cut(s) 390
Bpu1102I GCTNAGC 1 cut(s) 254
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 2 cut(s) 733, 1190
BsaJI CCNNGG 2 cut(s) 169, 856
BsaWI WCCGGW 1 cut(s) 368
BsaXI ACNNNNNCTCC 4 cut(s) 757, 787, 826, 856
Bsc4I CCNNNNNNNGG 9 cut(s) 72, 242, 312, 368, 395, 490, 537, 851, 1148
Bse118I RCCGGY 1 cut(s) 569
Bse1I ACTGG 2 cut(s) 1001, 1099
Bse3DI GCAATG 1 cut(s) 316
BseBI CCWGG 4 cut(s) 396, 558, 928, 1221
BseDI CCNNGG 2 cut(s) 169, 856
BseGI GGATG 4 cut(s) 232, 553, 743, 1369
BseLI CCNNNNNNNGG 9 cut(s) 72, 242, 312, 368, 395, 490, 537, 851, 1148
BseMI GCAATG 1 cut(s) 316
BseMII CTCAG 3 cut(s) 268, 381, 1368
BseNI ACTGG 2 cut(s) 1001, 1099
BseRI GAGGAG 2 cut(s) 665, 778
BseXI GCAGC 5 cut(s) 161, 463, 485, 1391, 1416
BshFI GGCC 5 cut(s) 5, 855, 861, 1153, 1451
BsiHKAI GWGCWC 1 cut(s) 1308
BsiSI CCGG 2 cut(s) 369, 570
BslI CCNNNNNNNGG 9 cut(s) 72, 242, 312, 368, 395, 490, 537, 851, 1148
BsmAI GTCTC 5 cut(s) 379, 733, 1182, 1190, 1450
BsmBI CGTCTC 1 cut(s) 1450
BsnI GGCC 5 cut(s) 5, 855, 861, 1153, 1451
Bso31I GGTCTC 2 cut(s) 733, 1190
Bsp1286I GDGCHC 1 cut(s) 1308
Bsp1407I TGTACA 2 cut(s) 893, 1060
Bsp143I GATC 5 cut(s) 69, 715, 949, 1097, 1156
Bsp1720I GCTNAGC 1 cut(s) 254
BspACI CCGC 2 cut(s) 132, 846
BspANI GGCC 5 cut(s) 5, 855, 861, 1153, 1451
BspCNI CTCAG 3 cut(s) 267, 382, 1369
BspHI TCATGA 2 cut(s) 795, 1159
BspLI GGNNCC 4 cut(s) 304, 1099, 1290, 1336
BspMAI CTGCAG 1 cut(s) 1434
BspPI GGATC 2 cut(s) 1092, 1105
BspTNI GGTCTC 2 cut(s) 733, 1190
BsrDI GCAATG 1 cut(s) 316
BsrFI RCCGGY 1 cut(s) 569
BsrGI TGTACA 2 cut(s) 893, 1060
BsrI ACTGG 2 cut(s) 1001, 1099
BssAI RCCGGY 1 cut(s) 569
BssECI CCNNGG 2 cut(s) 169, 856
BssMI GATC 5 cut(s) 69, 715, 949, 1097, 1156
BssNI GRCGYC 1 cut(s) 198
BssSI CACGAG 1 cut(s) 820
BssT1I CCWWGG 2 cut(s) 169, 856
Bst2BI CACGAG 1 cut(s) 820
Bst2UI CCWGG 4 cut(s) 396, 558, 928, 1221
Bst4CI ACNGT 5 cut(s) 240, 898, 1105, 1300, 1372
Bst6I CTCTTC 1 cut(s) 489
BstACI GRCGYC 1 cut(s) 198
BstAUI TGTACA 2 cut(s) 893, 1060
BstDEI CTNAG 4 cut(s) 254, 390, 732, 1377
BstENI CCTNNNNNAGG 2 cut(s) 70, 393
BstF5I GGATG 4 cut(s) 232, 553, 743, 1369
BstKTI GATC 5 cut(s) 72, 718, 952, 1100, 1159
BstMAI GTCTC 5 cut(s) 379, 733, 1182, 1190, 1450
BstMBI GATC 5 cut(s) 69, 715, 949, 1097, 1156
BstNI CCWGG 4 cut(s) 396, 558, 928, 1221
BstNSI RCATGY 1 cut(s) 979
BstSCI CCNGG 4 cut(s) 394, 556, 926, 1219
BstSFI CTRYAG 1 cut(s) 1430
BstV1I GCAGC 5 cut(s) 161, 463, 485, 1391, 1416
BstX2I RGATCY 1 cut(s) 1097
BstXI CCANNNNNNTGG 1 cut(s) 557
BstYI RGATCY 1 cut(s) 1097
BsuI GTATCC 2 cut(s) 1211, 1462
BsuRI GGCC 5 cut(s) 5, 855, 861, 1153, 1451
BtsCI GGATG 4 cut(s) 232, 553, 743, 1369
BtsIMutI CAGTG 1 cut(s) 1101
CaiI CAGNNNCTG 3 cut(s) 902, 1088, 1376
CciI TCATGA 2 cut(s) 795, 1159
Cfr10I RCCGGY 1 cut(s) 569
Cfr13I GGNCC 1 cut(s) 1151
CseI GACGC 3 cut(s) 206, 416, 656
CsiI ACCWGGT 1 cut(s) 926
Csp6I GTAC 4 cut(s) 865, 894, 1061, 1296
CviAII CATG 9 cut(s) 379, 487, 758, 796, 976, 1015, 1025, 1160, 1282
CviQI GTAC 4 cut(s) 865, 894, 1061, 1296
DdeI CTNAG 4 cut(s) 254, 390, 732, 1377
DpnI GATC 5 cut(s) 71, 717, 951, 1099, 1158
DpnII GATC 5 cut(s) 69, 715, 949, 1097, 1156
DrdI GACNNNNNNGTC 1 cut(s) 287
DriI GACNNNNNGTC 1 cut(s) 666
DseDI GACNNNNNNGTC 1 cut(s) 287
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 489
Eam1105I GACNNNNNGTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 489
Eco130I CCWWGG 2 cut(s) 169, 856
Eco147I AGGCCT 1 cut(s) 861
Eco31I GGTCTC 2 cut(s) 733, 1190
Eco32I GATATC 1 cut(s) 1279
Eco57I CTGAAG 1 cut(s) 42
EcoNI CCTNNNNNAGG 2 cut(s) 70, 393
EcoO109I RGGNCCY 1 cut(s) 1151
EcoRII CCWGG 4 cut(s) 394, 556, 926, 1219
EcoRV GATATC 1 cut(s) 1279
EcoT14I CCWWGG 2 cut(s) 169, 856
EcoT22I ATGCAT 1 cut(s) 987
ErhI CCWWGG 2 cut(s) 169, 856
Esp3I CGTCTC 1 cut(s) 1450
FaeI CATG 9 cut(s) 382, 490, 761, 799, 979, 1018, 1028, 1163, 1285
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 612, 644
FatI CATG 9 cut(s) 378, 486, 757, 795, 975, 1014, 1024, 1159, 1281
FauI CCCGC 1 cut(s) 853
FbaI TGATCA 3 cut(s) 69, 949, 1156
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 6 cut(s) 132, 150, 474, 477, 1405, 1430
FokI GGATG 4 cut(s) 239, 540, 750, 1376
Fsp4HI GCNGC 6 cut(s) 132, 150, 474, 477, 1405, 1430
FspBI CTAG 4 cut(s) 170, 828, 857, 1293
GluI GCNGC 6 cut(s) 132, 150, 474, 477, 1405, 1430
HaeIII GGCC 5 cut(s) 5, 855, 861, 1153, 1451
HapII CCGG 2 cut(s) 369, 570
HgaI GACGC 3 cut(s) 206, 416, 656
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 9 cut(s) 382, 490, 761, 799, 979, 1018, 1028, 1163, 1285
HindIII AAGCTT 1 cut(s) 1321
HpaII CCGG 2 cut(s) 369, 570
HphI GGTGA 5 cut(s) 46, 70, 622, 1110, 1121
Hpy166II GTNNAC 4 cut(s) 78, 220, 657, 825
Hpy188I TCNGA 4 cut(s) 118, 1359, 1378, 1468
Hpy188III TCNNGA 7 cut(s) 355, 563, 658, 796, 953, 1124, 1160
Hpy8I GTNNAC 4 cut(s) 78, 220, 657, 825
Hpy99I CGWCG 4 cut(s) 200, 854, 1412, 1464
HpyAV CCTTC 2 cut(s) 90, 1142
HpyCH4III ACNGT 5 cut(s) 240, 898, 1105, 1300, 1372
HpyCH4IV ACGT 3 cut(s) 534, 871, 1462
HpyCH4V TGCA 6 cut(s) 309, 382, 479, 985, 1091, 1432
HpyF3I CTNAG 4 cut(s) 254, 390, 732, 1377
HpySE526I ACGT 3 cut(s) 534, 871, 1462
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 9 cut(s) 382, 490, 761, 799, 979, 1018, 1028, 1163, 1285
Ksp22I TGATCA 3 cut(s) 69, 949, 1156
Kzo9I GATC 5 cut(s) 69, 715, 949, 1097, 1156
LmnI GCTCC 1 cut(s) 308
Lsp1109I GCAGC 5 cut(s) 161, 463, 485, 1391, 1416
LweI GCATC 3 cut(s) 143, 728, 994
MabI ACCWGGT 1 cut(s) 926
MaeI CTAG 4 cut(s) 170, 828, 857, 1293
MaeII ACGT 3 cut(s) 534, 871, 1462
MaeIII GTNAC 2 cut(s) 1109, 1116
MalI GATC 5 cut(s) 71, 717, 951, 1099, 1158
MboI GATC 5 cut(s) 69, 715, 949, 1097, 1156
MboII GAAGA 6 cut(s) 35, 506, 512, 523, 1040, 1283
MflI RGATCY 1 cut(s) 1097
MhlI GDGCHC 1 cut(s) 1308
MluCI AATT 4 cut(s) 125, 140, 592, 624
MlyI GAGTC 8 cut(s) 174, 381, 812, 819, 928, 1106, 1184, 1246
MmeI TCCRAC 2 cut(s) 574, 1416
Mph1103I ATGCAT 1 cut(s) 987
MroXI GAANNNNTTC 2 cut(s) 515, 1372
MseI TTAA 2 cut(s) 678, 1394
MslI CAYNNNNRTG 2 cut(s) 662, 980
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 2 cut(s) 369, 570
MspR9I CCNGG 4 cut(s) 396, 558, 928, 1221
MvaI CCWGG 4 cut(s) 396, 558, 928, 1221
NdeII GATC 5 cut(s) 69, 715, 949, 1097, 1156
NlaIII CATG 9 cut(s) 382, 490, 761, 799, 979, 1018, 1028, 1163, 1285
NlaIV GGNNCC 4 cut(s) 304, 1099, 1290, 1336
NmeAIII GCCGAG 1 cut(s) 279
NmuCI GTSAC 2 cut(s) 1109, 1116
NsiI ATGCAT 1 cut(s) 987
NspI RCATGY 1 cut(s) 979
PagI TCATGA 2 cut(s) 795, 1159
PceI AGGCCT 1 cut(s) 861
PdmI GAANNNNTTC 2 cut(s) 515, 1372
PfeI GAWTC 5 cut(s) 212, 358, 1018, 1354, 1381
PflMI CCANNNNNTGG 2 cut(s) 242, 537
PkrI GCNGC 6 cut(s) 133, 151, 475, 478, 1406, 1431
PleI GAGTC 8 cut(s) 174, 380, 812, 818, 927, 1106, 1183, 1245
PpsI GAGTC 8 cut(s) 174, 380, 812, 818, 927, 1106, 1183, 1245
Psp1406I AACGTT 1 cut(s) 534
Psp6I CCWGG 4 cut(s) 394, 556, 926, 1219
PspGI CCWGG 4 cut(s) 394, 556, 926, 1219
PspN4I GGNNCC 4 cut(s) 304, 1099, 1290, 1336
PspPI GGNCC 1 cut(s) 1151
PstI CTGCAG 1 cut(s) 1434
PstNI CAGNNNCTG 3 cut(s) 902, 1088, 1376
PsuI RGATCY 1 cut(s) 1097
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 4 cut(s) 866, 895, 1062, 1297
RsaNI GTAC 4 cut(s) 865, 894, 1061, 1296
RseI CAYNNNNRTG 2 cut(s) 662, 980
SaqAI TTAA 2 cut(s) 678, 1394
SatI GCNGC 6 cut(s) 132, 150, 474, 477, 1405, 1430
Sau3AI GATC 5 cut(s) 69, 715, 949, 1097, 1156
Sau96I GGNCC 1 cut(s) 1151
ScaI AGTACT 1 cut(s) 1297
SchI GAGTC 8 cut(s) 174, 381, 812, 819, 928, 1106, 1184, 1246
ScrFI CCNGG 4 cut(s) 396, 558, 928, 1221
SduI GDGCHC 1 cut(s) 1308
SexAI ACCWGGT 1 cut(s) 926
SfaNI GCATC 3 cut(s) 143, 728, 994
SfcI CTRYAG 1 cut(s) 1430
SmiMI CAYNNNNRTG 2 cut(s) 662, 980
Sse9I AATT 4 cut(s) 125, 140, 592, 624
SseBI AGGCCT 1 cut(s) 861
SsiI CCGC 2 cut(s) 132, 846
SspI AATATT 1 cut(s) 40
SspMI CTAG 4 cut(s) 170, 828, 857, 1293
StuI AGGCCT 1 cut(s) 861
StyD4I CCNGG 4 cut(s) 394, 556, 926, 1219
StyI CCWWGG 2 cut(s) 169, 856
TaaI ACNGT 5 cut(s) 240, 898, 1105, 1300, 1372
TaiI ACGT 3 cut(s) 537, 874, 1465
TaqI TCGA 4 cut(s) 210, 267, 783, 1173
TasI AATT 4 cut(s) 125, 140, 592, 624
TatI WGTACW 3 cut(s) 893, 1060, 1295
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 5 cut(s) 212, 358, 1018, 1354, 1381
Tru1I TTAA 2 cut(s) 678, 1394
Tru9I TTAA 2 cut(s) 678, 1394
TscAI CASTG 1 cut(s) 1108
TseFI GTSAC 2 cut(s) 1109, 1116
TseI GCWGC 5 cut(s) 149, 473, 476, 1404, 1429
Tsp45I GTSAC 2 cut(s) 1109, 1116
TspDTI ATGAA 7 cut(s) 94, 524, 593, 746, 1041, 1315, 1367
TspGWI ACGGA 4 cut(s) 73, 290, 980, 1087
TspRI CASTG 1 cut(s) 1108
Van91I CCANNNNNTGG 2 cut(s) 242, 537
XagI CCTNNNNNAGG 2 cut(s) 70, 393
XapI RAATTY 2 cut(s) 125, 592
XceI RCATGY 1 cut(s) 979
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmaJI CCTAGG 2 cut(s) 169, 856
XmiI GTMKAC 1 cut(s) 219
XmnI GAANNNNTTC 2 cut(s) 515, 1372
XspI CTAG 4 cut(s) 170, 828, 857, 1293
ZrmI AGTACT 1 cut(s) 1297
Zsp2I ATGCAT 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.