Rmu_sc0007173.1_g000008

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007173.1
OG0000082
Physical Location & Seq
Reverse (-)
13862 .. 17318
3457 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007173.1_g000008.1.cds

Sequence Viewer

Length: 1890 bp
atggcagacctaccggaagatatgatagtggaaatccttcacagggttccccaaaaacccttggtccgattcagccttgtttcaaaacggtggcattccattatatgtgacgacccacaattcaagaaatcctatgtgaaattagcatccgagaagcaaaccttaagtcgtagactcctcctctgcaccggtgccgcccacgctcaagtagaatccttagacttggagacgccgtcgtttggagtcacaaaagtcggctgtccattcaataatcgtgggtatcgtgtaaagctactaggctcctgcaatgggttggtatgtgtagctcttgttgagcctgagcaaaacttggatggccgctacgcagcagctcttgagtctatccgaaacttgtatatttggaacccatcaaacggattcttccaaaaattacacgaccctggtttttccggagaagatggtatcgtggtttactctggttttggccatttatcagctacagacgactacaaagtttttgtagccactggtaggagcaagtggcggccagttgggaattggtgggacatcaagaaggtcaagatattctcattaaggagtaagttatggaaaatgattgaactccctccagacgttagcctccggcggcgtcgggggaccctgtgcaatgaggcccttcattggatactcaatccctcttattcaagaggtatagatcatatcgttgcatttgatttggccaaggaagagttcagcaggcaaatcccgctgcctgactctctcatgaaggtccggggcgcattcaaagaacttggccaaggcgtttgttccgcaggatgcctgtgtgtgatgtcgagttcccgtaaagactctattgatttgtgggtgatgagagaatatggcgtgcgtgactcctggactaagttctttaactttatgattaccaacccgctgcgtgacacatatgagtgtaatgaacgaccaatcagcatggttactgaggaggatcaaagctttccagatctgaccaggagaacaacaaggccatcccgctggtacggtaaaaggtctgatgcagaacggatggcagcccaattcgaagagcagtttgatcgtgcaaaaggaggaaaacgaaaagttactagtagccacgccatagctcggttggtttgtgtagctcttgttgatcctgagcaaaagttggatgattggaacccagcagctcttgagtctatccgaaacttgtatatttggaacccatcaaacggattcttccaaaaattacatgaccctggtttttccggggaagatggtatcgtggtttactctggttttggccatttgtcagctacagacgactacaaattttttgtagccactggtaggagcaagtggcggccaagtgggaattggtgggagatgaagaaggtcaagatattctcgctgaggagtaagttatggaaaatgattgaactccctccagacattagcctccagcgtcgggggaccctgtgcaatgaggcccttcattggatgctctatccctatgaatcaagaggtacagatcatatcgttgcatttgatttggccaaggaagagttcagcaggcaaatcccgctgcctgactctctcatgaaggtccggggcgctttcaaagaacttggtgtttattcagcagaatgcctgtgtgtgatgtcgagttcccgtaaagacactattgatttgtgggtgatgagagaatatggcatgcatgactcctggactaagctctttaactttaggattaccaacccgcggtgtgactcgtttgtgtttaaaacatcagtcatagttacggaggagggtacactttctgtaattatacagagttggcttagatgggatcgatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

629

Amino Acids

72.35

Weight (kDa)

8.96

Isoelectric Point (pI)

48.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 191
AccI GTMKAC 1 cut(s) 172
AccII CGCG 1 cut(s) 1795
AccIII TCCGGA 1 cut(s) 449
AclWI GGATC 2 cut(s) 1014, 1181
AcoI YGGCCR 8 cut(s) 355, 484, 545, 738, 814, 1336, 1397, 1587
AcsI RAATTY 1 cut(s) 1364
AcyI GRCGYC 2 cut(s) 230, 649
AfaI GTAC 3 cut(s) 1058, 1561, 1846
AflII CTTAAG 1 cut(s) 163
AgeI ACCGGT 1 cut(s) 188
AgsI TTSAA 8 cut(s) 84, 124, 268, 620, 705, 805, 1472, 1654
AhlI ACTAGT 1 cut(s) 1142
AjnI CCWGG 5 cut(s) 439, 914, 1028, 1291, 1757
AjuI GAANNNNNNNTTGG 4 cut(s) 734, 766, 1583, 1615
Alw26I GTCTC 1 cut(s) 221
AlwI GGATC 2 cut(s) 1014, 1181
Aor13HI TCCGGA 1 cut(s) 449
ApeKI GCWGC 7 cut(s) 365, 368, 769, 952, 1088, 1220, 1618
ApoI RAATTY 1 cut(s) 1364
ArsI GACNNNNNNTTYG 2 cut(s) 151, 183
AsiGI ACCGGT 1 cut(s) 188
Asp700I GAANNNNTTC 1 cut(s) 36
AspLEI GCGC 2 cut(s) 800, 1649
AspS9I GGNCC 7 cut(s) 64, 657, 673, 790, 1506, 1522, 1639
AsuC2I CCSGG 3 cut(s) 794, 1303, 1643
AsuHPI GGTGA 2 cut(s) 898, 1741
AsuII TTCGAA 1 cut(s) 1098
AvaII GGWCC 5 cut(s) 64, 657, 790, 1506, 1639
BalI TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
BanI GGYRCC 1 cut(s) 191
BbvCI CCTCAGC 1 cut(s) 1445
BbvI GCAGC 7 cut(s) 377, 380, 756, 939, 1100, 1232, 1605
BccI CCATC 8 cut(s) 347, 415, 452, 1054, 1078, 1267, 1304, 1872
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 5 cut(s) 441, 916, 1030, 1293, 1759
BciVI GTATCC 1 cut(s) 678
BcnI CCSGG 3 cut(s) 794, 1303, 1643
BcoDI GTCTC 1 cut(s) 221
BcuI ACTAGT 1 cut(s) 1142
BfaI CTAG 2 cut(s) 296, 1143
BfmI CTRYAG 2 cut(s) 498, 1350
BfoI RGCGCY 1 cut(s) 1650
BfrI CTTAAG 1 cut(s) 163
BfuI GTATCC 1 cut(s) 678
BglII AGATCT 1 cut(s) 1021
Bme1390I CCNGG 8 cut(s) 441, 794, 916, 1030, 1293, 1303, 1643, 1759
Bme18I GGWCC 5 cut(s) 64, 657, 790, 1506, 1639
BmgT120I GGNCC 7 cut(s) 64, 657, 673, 790, 1506, 1522, 1639
BmrFI CCNGG 8 cut(s) 441, 794, 916, 1030, 1293, 1303, 1643, 1759
BmsI GCATC 4 cut(s) 155, 827, 1063, 1524
BpmI CTGGAG 3 cut(s) 612, 1464, 1478
Bpu10I CCTNAGC 3 cut(s) 339, 1191, 1445
Bpu14I TTCGAA 1 cut(s) 1098
BpuEI CTTGAG 3 cut(s) 189, 395, 1247
BpuMI CCSGG 3 cut(s) 794, 1303, 1643
Bsa29I ATCGAT 1 cut(s) 1885
BsaHI GRCGYC 2 cut(s) 230, 649
BsaWI WCCGGW 3 cut(s) 13, 188, 449
BsaXI ACNNNNNCTCC 2 cut(s) 218, 248
Bse118I RCCGGY 1 cut(s) 188
Bse1I ACTGG 3 cut(s) 532, 548, 1384
Bse3DI GCAATG 3 cut(s) 313, 673, 1522
BseAI TCCGGA 1 cut(s) 449
BseBI CCWGG 5 cut(s) 441, 916, 1030, 1293, 1759
BseCI ATCGAT 1 cut(s) 1885
BseGI GGATG 7 cut(s) 146, 358, 842, 1046, 1089, 1210, 1539
BseMI GCAATG 3 cut(s) 313, 673, 1522
BseMII CTCAG 4 cut(s) 330, 990, 1182, 1436
BseNI ACTGG 3 cut(s) 532, 548, 1384
BseRI GAGGAG 5 cut(s) 167, 170, 1016, 1462, 1853
BseXI GCAGC 7 cut(s) 377, 380, 756, 939, 1100, 1232, 1605
BseYI CCCAGC 1 cut(s) 1216
BsgI GTGCAG 1 cut(s) 169
Bsh1236I CGCG 1 cut(s) 1795
BshNI GGYRCC 1 cut(s) 191
BshTI ACCGGT 1 cut(s) 188
BshVI ATCGAT 1 cut(s) 1885
BsiSI CCGG 7 cut(s) 14, 189, 450, 643, 793, 1302, 1642
BslFI GGGAC 3 cut(s) 578, 670, 1519
BsmAI GTCTC 1 cut(s) 221
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 3 cut(s) 578, 670, 1519
BsmI GAATGC 3 cut(s) 94, 800, 1685
Bsp119I TTCGAA 1 cut(s) 1098
Bsp13I TCCGGA 1 cut(s) 449
Bsp143I GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
BspCNI CTCAG 4 cut(s) 331, 991, 1183, 1437
BspDI ATCGAT 1 cut(s) 1885
BspEI TCCGGA 1 cut(s) 449
BspFNI CGCG 1 cut(s) 1795
BspHI TCATGA 2 cut(s) 783, 1632
BspPI GGATC 2 cut(s) 1014, 1181
BspQI GCTCTTC 1 cut(s) 1095
BspT104I TTCGAA 1 cut(s) 1098
BspT107I GGYRCC 1 cut(s) 191
BspTI CTTAAG 1 cut(s) 163
BsrDI GCAATG 3 cut(s) 313, 673, 1522
BsrFI RCCGGY 1 cut(s) 188
BsrI ACTGG 3 cut(s) 532, 548, 1384
BssAI RCCGGY 1 cut(s) 188
BssMI GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
BssNI GRCGYC 2 cut(s) 230, 649
BssT1I CCWWGG 4 cut(s) 60, 741, 817, 1590
Bst2UI CCWGG 5 cut(s) 441, 916, 1030, 1293, 1759
Bst4CI ACNGT 2 cut(s) 90, 1061
Bst6I CTCTTC 3 cut(s) 741, 1095, 1590
BstACI GRCGYC 2 cut(s) 230, 649
BstAFI CTTAAG 1 cut(s) 163
BstBI TTCGAA 1 cut(s) 1098
BstC8I GCNNGC 4 cut(s) 758, 905, 1607, 1748
BstDEI CTNAG 8 cut(s) 217, 339, 921, 999, 1191, 1445, 1764, 1874
BstDSI CCRYGG 1 cut(s) 1793
BstF5I GGATG 7 cut(s) 146, 358, 842, 1046, 1089, 1210, 1539
BstFNI CGCG 1 cut(s) 1795
BstH2I RGCGCY 1 cut(s) 1650
BstHHI GCGC 2 cut(s) 800, 1649
BstKTI GATC 7 cut(s) 718, 1009, 1024, 1114, 1189, 1567, 1885
BstMAI GTCTC 1 cut(s) 221
BstMBI GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
BstMWI GCNNNNNNNGC 3 cut(s) 200, 766, 1615
BstNI CCWGG 5 cut(s) 441, 916, 1030, 1293, 1759
BstNSI RCATGY 1 cut(s) 1750
BstSCI CCNGG 8 cut(s) 439, 792, 914, 1028, 1291, 1301, 1641, 1757
BstSFI CTRYAG 2 cut(s) 498, 1350
BstUI CGCG 1 cut(s) 1795
BstV1I GCAGC 7 cut(s) 377, 380, 756, 939, 1100, 1232, 1605
BstX2I RGATCY 1 cut(s) 1021
BstXI CCANNNNNNTGG 1 cut(s) 1053
BstYI RGATCY 1 cut(s) 1021
Bsu15I ATCGAT 1 cut(s) 1885
BsuI GTATCC 1 cut(s) 678
BsuTUI ATCGAT 1 cut(s) 1885
BtgI CCRYGG 1 cut(s) 1793
BtsCI GGATG 7 cut(s) 146, 358, 842, 1046, 1089, 1210, 1539
BtsIMutI CAGTG 2 cut(s) 525, 1377
Cac8I GCNNGC 4 cut(s) 758, 905, 1607, 1748
CciI TCATGA 2 cut(s) 783, 1632
CfoI GCGC 2 cut(s) 800, 1649
Cfr10I RCCGGY 1 cut(s) 188
Cfr13I GGNCC 7 cut(s) 64, 657, 673, 790, 1506, 1522, 1639
Cfr42I CCGCGG 1 cut(s) 1796
ClaI ATCGAT 1 cut(s) 1885
CseI GACGC 3 cut(s) 238, 638, 1487
Csp6I GTAC 3 cut(s) 1057, 1560, 1845
CspAI ACCGGT 1 cut(s) 188
CspCI CAANNNNNGTGG 2 cut(s) 256, 291
CviAII CATG 6 cut(s) 784, 991, 1286, 1633, 1747, 1751
CviQI GTAC 3 cut(s) 1057, 1560, 1845
DdeI CTNAG 8 cut(s) 217, 339, 921, 999, 1191, 1445, 1764, 1874
DpnI GATC 7 cut(s) 717, 1008, 1023, 1113, 1188, 1566, 1884
DpnII GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
DraI TTTAAA 1 cut(s) 1816
EaeI YGGCCR 8 cut(s) 355, 484, 545, 738, 814, 1336, 1397, 1587
Eam1104I CTCTTC 3 cut(s) 741, 1095, 1590
EarI CTCTTC 3 cut(s) 741, 1095, 1590
Eco130I CCWWGG 4 cut(s) 60, 741, 817, 1590
Eco47I GGWCC 5 cut(s) 64, 657, 790, 1506, 1639
EcoO109I RGGNCCY 4 cut(s) 657, 673, 1506, 1522
EcoRII CCWGG 5 cut(s) 439, 914, 1028, 1291, 1757
EcoT14I CCWWGG 4 cut(s) 60, 741, 817, 1590
EcoT22I ATGCAT 1 cut(s) 1752
ErhI CCWWGG 4 cut(s) 60, 741, 817, 1590
Esp3I CGTCTC 1 cut(s) 221
FaeI CATG 6 cut(s) 787, 994, 1289, 1636, 1750, 1754
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 3 cut(s) 578, 670, 1519
FatI CATG 6 cut(s) 783, 990, 1285, 1632, 1746, 1750
FauI CCCGC 5 cut(s) 774, 957, 1058, 1623, 1800
FauNDI CATATG 1 cut(s) 964
FblI GTMKAC 1 cut(s) 172
FokI GGATG 7 cut(s) 133, 365, 849, 1033, 1096, 1217, 1546
FspBI CTAG 2 cut(s) 296, 1143
GlaI GCGC 2 cut(s) 799, 1648
GsaI CCCAGC 1 cut(s) 1220
GsuI CTGGAG 3 cut(s) 612, 1464, 1478
HaeII RGCGCY 1 cut(s) 1650
HapII CCGG 7 cut(s) 14, 189, 450, 643, 793, 1302, 1642
HgaI GACGC 3 cut(s) 238, 638, 1487
HhaI GCGC 2 cut(s) 800, 1649
Hin1I GRCGYC 2 cut(s) 230, 649
Hin1II CATG 6 cut(s) 787, 994, 1289, 1636, 1750, 1754
Hin6I GCGC 2 cut(s) 798, 1647
HinP1I GCGC 2 cut(s) 798, 1647
HindIII AAGCTT 1 cut(s) 1012
HpaII CCGG 7 cut(s) 14, 189, 450, 643, 793, 1302, 1642
HphI GGTGA 2 cut(s) 898, 1741
Hpy166II GTNNAC 4 cut(s) 173, 472, 1324, 1847
Hpy188I TCNGA 6 cut(s) 68, 151, 386, 1026, 1072, 1238
Hpy8I GTNNAC 4 cut(s) 173, 472, 1324, 1847
Hpy99I CGWCG 3 cut(s) 238, 654, 1503
HpyAV CCTTC 7 cut(s) 47, 568, 686, 781, 1420, 1535, 1630
HpyCH4III ACNGT 2 cut(s) 90, 1061
HpyCH4IV ACGT 1 cut(s) 633
HpyCH4V TGCA 9 cut(s) 186, 306, 666, 728, 1076, 1118, 1515, 1577, 1750
HpyF10VI GCNNNNNNNGC 3 cut(s) 200, 766, 1615
HpyF3I CTNAG 8 cut(s) 217, 339, 921, 999, 1191, 1445, 1764, 1874
HpySE526I ACGT 1 cut(s) 633
Hsp92I GRCGYC 2 cut(s) 230, 649
Hsp92II CATG 6 cut(s) 787, 994, 1289, 1636, 1750, 1754
HspAI GCGC 2 cut(s) 798, 1647
KflI GGGWCCC 2 cut(s) 657, 1506
Kpn2I TCCGGA 1 cut(s) 449
KspI CCGCGG 1 cut(s) 1796
Kzo9I GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
LguI GCTCTTC 1 cut(s) 1095
LmnI GCTCC 3 cut(s) 305, 534, 1386
Lsp1109I GCAGC 7 cut(s) 377, 380, 756, 939, 1100, 1232, 1605
LweI GCATC 4 cut(s) 155, 827, 1063, 1524
MaeI CTAG 2 cut(s) 296, 1143
MaeII ACGT 1 cut(s) 633
MaeIII GTNAC 8 cut(s) 107, 244, 908, 956, 994, 1138, 1799, 1831
MalI GATC 7 cut(s) 717, 1008, 1023, 1113, 1188, 1566, 1884
MboI GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
MboII GAAGA 9 cut(s) 29, 412, 467, 758, 1112, 1264, 1319, 1435, 1607
MflI RGATCY 1 cut(s) 1021
MlsI TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
MluCI AATT 9 cut(s) 119, 140, 428, 556, 1094, 1280, 1364, 1408, 1857
MluNI TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
MmeI TCCRAC 1 cut(s) 1182
Mox20I TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
Mph1103I ATGCAT 1 cut(s) 1752
MroI TCCGGA 1 cut(s) 449
MroXI GAANNNNTTC 1 cut(s) 36
MscI TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
MseI TTAA 5 cut(s) 164, 593, 930, 1773, 1815
MslI CAYNNNNRTG 1 cut(s) 967
Msp20I TGGCCA 5 cut(s) 486, 740, 816, 1338, 1589
MspA1I CMGCKG 5 cut(s) 769, 952, 1053, 1618, 1795
MspCI CTTAAG 1 cut(s) 163
MspI CCGG 7 cut(s) 14, 189, 450, 643, 793, 1302, 1642
MspR9I CCNGG 8 cut(s) 441, 794, 916, 1030, 1293, 1303, 1643, 1759
Mva1269I GAATGC 3 cut(s) 94, 800, 1685
MvaI CCWGG 5 cut(s) 441, 916, 1030, 1293, 1759
MvnI CGCG 1 cut(s) 1795
MwoI GCNNNNNNNGC 3 cut(s) 200, 766, 1615
NciI CCSGG 3 cut(s) 794, 1303, 1643
NdeI CATATG 1 cut(s) 964
NdeII GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
NlaIII CATG 6 cut(s) 787, 994, 1289, 1636, 1750, 1754
NmuCI GTSAC 5 cut(s) 107, 244, 908, 956, 1799
NsiI ATGCAT 1 cut(s) 1752
NspI RCATGY 1 cut(s) 1750
NspV TTCGAA 1 cut(s) 1098
PaeI GCATGC 1 cut(s) 1750
PagI TCATGA 2 cut(s) 783, 1632
PciSI GCTCTTC 1 cut(s) 1095
PcsI WCGNNNNNNNCGW 1 cut(s) 280
PctI GAATGC 3 cut(s) 94, 800, 1685
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 5 cut(s) 69, 212, 417, 1269, 1550
PflFI GACNNNGTC 1 cut(s) 232
PfoI TCCNGGA 2 cut(s) 914, 1757
PinAI ACCGGT 1 cut(s) 188
PpuMI RGGWCCY 2 cut(s) 657, 1506
Psp5II RGGWCCY 2 cut(s) 657, 1506
Psp6I CCWGG 5 cut(s) 439, 914, 1028, 1291, 1757
PspFI CCCAGC 1 cut(s) 1216
PspGI CCWGG 5 cut(s) 439, 914, 1028, 1291, 1757
PspPI GGNCC 7 cut(s) 64, 657, 673, 790, 1506, 1522, 1639
PspPPI RGGWCCY 2 cut(s) 657, 1506
PsuI RGATCY 1 cut(s) 1021
PsyI GACNNNGTC 1 cut(s) 232
RsaI GTAC 3 cut(s) 1058, 1561, 1846
RsaNI GTAC 3 cut(s) 1057, 1560, 1845
RseI CAYNNNNRTG 1 cut(s) 967
SacII CCGCGG 1 cut(s) 1796
SapI GCTCTTC 1 cut(s) 1095
SaqAI TTAA 5 cut(s) 164, 593, 930, 1773, 1815
Sau3AI GATC 7 cut(s) 715, 1006, 1021, 1111, 1186, 1564, 1882
Sau96I GGNCC 7 cut(s) 64, 657, 673, 790, 1506, 1522, 1639
ScrFI CCNGG 8 cut(s) 441, 794, 916, 1030, 1293, 1303, 1643, 1759
SfaNI GCATC 4 cut(s) 155, 827, 1063, 1524
SfcI CTRYAG 2 cut(s) 498, 1350
Sfr303I CCGCGG 1 cut(s) 1796
SfuI TTCGAA 1 cut(s) 1098
SgrAI CRCCGGYG 1 cut(s) 188
SgrBI CCGCGG 1 cut(s) 1796
SinI GGWCC 5 cut(s) 64, 657, 790, 1506, 1639
SmiMI CAYNNNNRTG 1 cut(s) 967
SmlI CTYRAG 4 cut(s) 163, 204, 374, 1226
SmoI CTYRAG 4 cut(s) 163, 204, 374, 1226
SpeI ACTAGT 1 cut(s) 1142
SphI GCATGC 1 cut(s) 1750
Sse9I AATT 9 cut(s) 119, 140, 428, 556, 1094, 1280, 1364, 1408, 1857
SspMI CTAG 2 cut(s) 296, 1143
StyD4I CCNGG 8 cut(s) 439, 792, 914, 1028, 1291, 1301, 1641, 1757
StyI CCWWGG 4 cut(s) 60, 741, 817, 1590
TaaI ACNGT 2 cut(s) 90, 1061
TaiI ACGT 1 cut(s) 636
TaqI TCGA 4 cut(s) 854, 1098, 1697, 1885
TasI AATT 9 cut(s) 119, 140, 428, 556, 1094, 1280, 1364, 1408, 1857
TauI GCSGC 5 cut(s) 197, 360, 547, 649, 1399
TfiI GAWTC 5 cut(s) 69, 212, 417, 1269, 1550
Tru1I TTAA 5 cut(s) 164, 593, 930, 1773, 1815
Tru9I TTAA 5 cut(s) 164, 593, 930, 1773, 1815
TscAI CASTG 2 cut(s) 532, 1384
TseFI GTSAC 5 cut(s) 107, 244, 908, 956, 1799
TseI GCWGC 7 cut(s) 365, 368, 769, 952, 1088, 1220, 1618
Tsp45I GTSAC 5 cut(s) 107, 244, 908, 956, 1799
TspDTI ATGAA 7 cut(s) 668, 800, 990, 1436, 1517, 1563, 1649
TspGWI ACGGA 4 cut(s) 429, 1096, 1281, 1850
TspRI CASTG 2 cut(s) 532, 1384
Tth111I GACNNNGTC 1 cut(s) 232
Vha464I CTTAAG 1 cut(s) 163
VpaK11BI GGWCC 5 cut(s) 64, 657, 790, 1506, 1639
XapI RAATTY 1 cut(s) 1364
XceI RCATGY 1 cut(s) 1750
XcmI CCANNNNNNNNNTGG 3 cut(s) 555, 1162, 1407
XmiI GTMKAC 1 cut(s) 172
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 2 cut(s) 296, 1143
Zsp2I ATGCAT 1 cut(s) 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.