FvH4_2g36710

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000082
Physical Location & Seq
Reverse (-)
26821280 .. 26829078
7799 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36710.t1

Sequence Viewer

Length: 1158 bp
ATGGCGAGGGAATTGCCCCAAGATATTATAGAGAATAACATCCTCACCAGGCTTCCCGTCAAATCCCTAATCCGATTCACCTCCGTTTCGAAAAGCTGGCGTTCCGTTATACTTTACAACCCTAGATTCGCGAAATCCCAATTTGAATCATCTTCCAAGACTCACAGAGTCCTGGTCTCCAGCAACGACTCTCCTGAACTCAAATCTCTAGACTTGGAGTCGCCGTGGTTCGGACACAATTCCTTCTCTTCCAGGAAGCTGCATTTCCCATTCGAGCAGCAACCGGCGTGCTGCAACTTCCTAGGCTCCTCTAATGGCTTGGTGTTTGTATCATTGGACAACAGGTTCTACATCTGGAACCCCTCGACTCGATTCTTCAAGAAACTGCCTGGCATTGGTTATCCCTCGGATGAAAGCACCGTGCCAATGTACTATGGTGCTGGATATTTGTCCGCCACAGACAACTACAAGGTTCTGATAGCCTACATGCTTGATAGTCAAGAGGAGGAGAAAAGTGTCGAGGCCGTACATGTTTTATCATTGAAATCTCTCATTTGGAGAATGGGCAATGCTGATAGCCTTGGCACCAATATATTTACTTGTCTTCAGGGGACGCTTTCGAATGAGGTGCTACATTGGCTGTATGAGTACAACTATTCCACATACGATCTGGTTGCTTTTGATTTGGCTAGCGAGGAGTTCCGGATAATGCAGCTGCCGGATTTTGATGATGATGGTAGGAGTTTGCATAGGTGCGAGCTTGGGGTTGTTGGAGGGTGCCTGTGTGTTGCGAGTTATACTGATGCGGCTATTACTTGTGACTCTGTTGATTTTTGGGTGATGAGAGAATATGACGTGCGTGAGTCTTGGACTAAGGTTTTTAACCTGGATTTTTCCAACTTGCCTGTGCAGCCATTGCTTGAGAAATCACCGTGCGGTTGGTTTGCTATGGAAAGTAGCACAGTTGCCTTGAAATGGACTGGCAAGGGGATTTGGTTCATGAGGATTGATCATAAAGAACAAGATAAGCTCGGCCTGTATATGATTGAGGGGAGCGGGTTTGCGATTGTGGAATATGAAGAGAGTCTAATTTGGATTGAGGAGAAAGAGAAAGTTAAGAAGACTAGAACCTCATCTCGGAGCCTGAAAAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

386

Amino Acids

44.18

Weight (kDa)

5.53

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 41 2.1e-06 F-box domain
FBA_3 PF08268 78 - 293 1.6e-18 F-box associated beta propeller domain
FBA_1 PF07734 103 - 305 5.3e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 584, 777
AccBSI CCGCTC 1 cut(s) 1056
AccII CGCG 1 cut(s) 131
AccIII TCCGGA 1 cut(s) 702
AciI CCGC 4 cut(s) 453, 806, 936, 1056
AcuI CTGAAG 1 cut(s) 590
AfaI GTAC 3 cut(s) 431, 528, 650
AfiI CCNNNNNNNGG 4 cut(s) 230, 395, 975, 1137
AflIII ACRYGT 1 cut(s) 529
AgsI TTSAA 4 cut(s) 146, 379, 544, 973
AhdI GACNNNNNGTC 1 cut(s) 217
AjiI CACGTC 1 cut(s) 856
AjnI CCWGG 5 cut(s) 47, 171, 251, 388, 885
AloI GAACNNNNNNTCC 2 cut(s) 329, 361
AluBI AGCT 5 cut(s) 96, 259, 715, 760, 1030
AluI AGCT 5 cut(s) 96, 259, 715, 760, 1030
Alw26I GTCTC 1 cut(s) 181
Aor13HI TCCGGA 1 cut(s) 702
AoxI GGCC 2 cut(s) 522, 1033
ApeKI GCWGC 6 cut(s) 259, 277, 291, 712, 715, 910
AspA2I CCTAGG 1 cut(s) 301
AsuHPI GGTGA 4 cut(s) 37, 70, 850, 921
AsuII TTCGAA 2 cut(s) 89, 620
AsuNHI GCTAGC 1 cut(s) 689
AvrII CCTAGG 1 cut(s) 301
BanI GGYRCC 2 cut(s) 584, 777
BbsI GAAGAC 2 cut(s) 596, 1127
BbvI GCAGC 6 cut(s) 246, 278, 289, 702, 724, 922
BccI CCATC 1 cut(s) 728
BceAI ACGGC 2 cut(s) 208, 509
BcgI CGANNNNNNTGC 5 cut(s) 29, 610, 644, 656, 690
BciT130I CCWGG 5 cut(s) 49, 173, 253, 390, 887
BclI TGATCA 1 cut(s) 1009
BcoDI GTCTC 1 cut(s) 181
BfaI CTAG 6 cut(s) 123, 209, 302, 690, 1125, 1156
BisI GCNGC 7 cut(s) 260, 278, 292, 713, 716, 807, 911
BlnI CCTAGG 1 cut(s) 301
BlsI GCNGC 7 cut(s) 261, 279, 293, 714, 717, 808, 912
Bme1390I CCNGG 5 cut(s) 49, 173, 253, 390, 887
BmeRI GACNNNNNGTC 1 cut(s) 217
BmgBI CACGTC 1 cut(s) 856
BmiI GGNNCC 5 cut(s) 307, 359, 586, 779, 1142
BmrFI CCNGG 5 cut(s) 49, 173, 253, 390, 887
BmsI GCATC 1 cut(s) 793
BmtI GCTAGC 1 cut(s) 693
BpiI GAAGAC 2 cut(s) 596, 1127
BpmI CTGGAG 1 cut(s) 163
Bpu14I TTCGAA 2 cut(s) 89, 620
BpuEI CTTGAG 1 cut(s) 941
BsaI GGTCTC 1 cut(s) 181
BsaJI CCNNGG 4 cut(s) 224, 301, 405, 580
BsaWI WCCGGW 1 cut(s) 702
BsaXI ACNNNNNCTCC 2 cut(s) 209, 239
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 395, 975, 1137
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 1 cut(s) 985
Bse3DI GCAATG 2 cut(s) 574, 914
BseAI TCCGGA 1 cut(s) 702
BseBI CCWGG 5 cut(s) 49, 173, 253, 390, 887
BseDI CCNNGG 4 cut(s) 224, 301, 405, 580
BseGI GGATG 2 cut(s) 39, 415
BseLI CCNNNNNNNGG 4 cut(s) 230, 395, 975, 1137
BseMI GCAATG 2 cut(s) 574, 914
BseNI ACTGG 1 cut(s) 985
BseRI GAGGAG 5 cut(s) 298, 518, 521, 710, 1115
BseXI GCAGC 6 cut(s) 246, 278, 289, 702, 724, 922
BsgI GTGCAG 1 cut(s) 929
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 2 cut(s) 524, 1035
BshNI GGYRCC 2 cut(s) 584, 777
BsiSI CCGG 3 cut(s) 284, 703, 719
BslFI GGGAC 1 cut(s) 625
BslI CCNNNNNNNGG 4 cut(s) 230, 395, 975, 1137
BsmAI GTCTC 1 cut(s) 181
BsmFI GGGAC 1 cut(s) 625
BsnI GGCC 2 cut(s) 524, 1035
Bso31I GGTCTC 1 cut(s) 181
Bsp119I TTCGAA 2 cut(s) 89, 620
Bsp13I TCCGGA 1 cut(s) 702
Bsp143I GATC 2 cut(s) 667, 1009
Bsp68I TCGCGA 1 cut(s) 131
BspACI CCGC 4 cut(s) 453, 806, 936, 1056
BspANI GGCC 2 cut(s) 524, 1035
BspEI TCCGGA 1 cut(s) 702
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 5 cut(s) 307, 359, 586, 779, 1142
BspOI GCTAGC 1 cut(s) 693
BspT104I TTCGAA 2 cut(s) 89, 620
BspT107I GGYRCC 2 cut(s) 584, 777
BspTNI GGTCTC 1 cut(s) 181
BsrBI CCGCTC 1 cut(s) 1056
BsrDI GCAATG 2 cut(s) 574, 914
BsrFI RCCGGY 1 cut(s) 283
BsrI ACTGG 1 cut(s) 985
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 4 cut(s) 224, 301, 405, 580
BssMI GATC 2 cut(s) 667, 1009
BssT1I CCWWGG 2 cut(s) 301, 580
Bst2UI CCWGG 5 cut(s) 49, 173, 253, 390, 887
Bst4CI ACNGT 3 cut(s) 421, 933, 964
Bst6I CTCTTC 2 cut(s) 253, 1074
BstAPI GCANNNNNTGC 1 cut(s) 916
BstBI TTCGAA 2 cut(s) 89, 620
BstC8I GCNNGC 4 cut(s) 98, 289, 691, 758
BstDEI CTNAG 1 cut(s) 873
BstDSI CCRYGG 1 cut(s) 224
BstF5I GGATG 2 cut(s) 39, 415
BstFNI CGCG 1 cut(s) 131
BstKTI GATC 2 cut(s) 670, 1012
BstMAI GTCTC 1 cut(s) 181
BstMBI GATC 2 cut(s) 667, 1009
BstMWI GCNNNNNNNGC 3 cut(s) 637, 910, 916
BstNI CCWGG 5 cut(s) 49, 173, 253, 390, 887
BstNSI RCATGY 2 cut(s) 490, 533
BstSCI CCNGG 5 cut(s) 47, 171, 251, 388, 885
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 6 cut(s) 246, 278, 289, 702, 724, 922
BstV2I GAAGAC 2 cut(s) 596, 1127
BsuRI GGCC 2 cut(s) 524, 1035
BtgI CCRYGG 1 cut(s) 224
BtrI CACGTC 1 cut(s) 856
BtsCI GGATG 2 cut(s) 39, 415
BtuMI TCGCGA 1 cut(s) 131
Cac8I GCNNGC 4 cut(s) 98, 289, 691, 758
CciI TCATGA 1 cut(s) 999
Cfr10I RCCGGY 1 cut(s) 283
CseI GACGC 1 cut(s) 622
Csp6I GTAC 3 cut(s) 430, 527, 649
CviAII CATG 3 cut(s) 487, 530, 1000
CviQI GTAC 3 cut(s) 430, 527, 649
DdeI CTNAG 1 cut(s) 873
DpnI GATC 2 cut(s) 669, 1011
DpnII GATC 2 cut(s) 667, 1009
DriI GACNNNNNGTC 1 cut(s) 217
Eam1104I CTCTTC 2 cut(s) 253, 1074
Eam1105I GACNNNNNGTC 1 cut(s) 217
EarI CTCTTC 2 cut(s) 253, 1074
EciI GGCGGA 1 cut(s) 442
Eco130I CCWWGG 2 cut(s) 301, 580
Eco31I GGTCTC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 590
EcoRII CCWGG 5 cut(s) 47, 171, 251, 388, 885
EcoT14I CCWWGG 2 cut(s) 301, 580
ErhI CCWWGG 2 cut(s) 301, 580
FaeI CATG 3 cut(s) 490, 533, 1003
FaqI GGGAC 1 cut(s) 625
FatI CATG 3 cut(s) 486, 529, 999
FauI CCCGC 1 cut(s) 1049
FbaI TGATCA 1 cut(s) 1009
Fnu4HI GCNGC 7 cut(s) 260, 278, 292, 713, 716, 807, 911
FokI GGATG 2 cut(s) 26, 422
Fsp4HI GCNGC 7 cut(s) 260, 278, 292, 713, 716, 807, 911
FspBI CTAG 6 cut(s) 123, 209, 302, 690, 1125, 1156
GluI GCNGC 7 cut(s) 260, 278, 292, 713, 716, 807, 911
GsuI CTGGAG 1 cut(s) 163
HaeIII GGCC 2 cut(s) 524, 1035
HapII CCGG 3 cut(s) 284, 703, 719
HgaI GACGC 1 cut(s) 622
Hin1II CATG 3 cut(s) 490, 533, 1003
HpaII CCGG 3 cut(s) 284, 703, 719
HphI GGTGA 4 cut(s) 37, 70, 850, 921
Hpy188I TCNGA 5 cut(s) 74, 233, 409, 477, 1140
Hpy188III TCNNGA 8 cut(s) 130, 194, 209, 355, 379, 500, 703, 1000
HpyAV CCTTC 1 cut(s) 253
HpyCH4III ACNGT 3 cut(s) 421, 933, 964
HpyCH4IV ACGT 1 cut(s) 855
HpyCH4V TGCA 5 cut(s) 262, 294, 712, 748, 910
HpyF10VI GCNNNNNNNGC 3 cut(s) 637, 910, 916
HpyF3I CTNAG 1 cut(s) 873
HpySE526I ACGT 1 cut(s) 855
Hsp92II CATG 3 cut(s) 490, 533, 1003
Kpn2I TCCGGA 1 cut(s) 702
Ksp22I TGATCA 1 cut(s) 1009
Kzo9I GATC 2 cut(s) 667, 1009
LmnI GCTCC 3 cut(s) 311, 1053, 1140
Lsp1109I GCAGC 6 cut(s) 246, 278, 289, 702, 724, 922
LweI GCATC 1 cut(s) 793
MaeI CTAG 6 cut(s) 123, 209, 302, 690, 1125, 1156
MaeII ACGT 1 cut(s) 855
MaeIII GTNAC 1 cut(s) 818
MalI GATC 2 cut(s) 669, 1011
MbiI CCGCTC 1 cut(s) 1056
MboI GATC 2 cut(s) 667, 1009
MboII GAAGA 6 cut(s) 144, 240, 367, 596, 1091, 1132
MluCI AATT 4 cut(s) 11, 140, 238, 1089
MlyI GAGTC 8 cut(s) 154, 177, 182, 227, 361, 815, 872, 1093
MmeI TCCRAC 2 cut(s) 751, 921
MroI TCCGGA 1 cut(s) 702
MseI TTAA 2 cut(s) 882, 1116
MspA1I CMGCKG 1 cut(s) 715
MspI CCGG 3 cut(s) 284, 703, 719
MspR9I CCNGG 5 cut(s) 49, 173, 253, 390, 887
MvaI CCWGG 5 cut(s) 49, 173, 253, 390, 887
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 3 cut(s) 637, 910, 916
NdeII GATC 2 cut(s) 667, 1009
NheI GCTAGC 1 cut(s) 689
NlaIII CATG 3 cut(s) 490, 533, 1003
NlaIV GGNNCC 5 cut(s) 307, 359, 586, 779, 1142
NmeAIII GCCGAG 1 cut(s) 1011
NmuCI GTSAC 1 cut(s) 818
NruI TCGCGA 1 cut(s) 131
NspI RCATGY 2 cut(s) 490, 533
NspV TTCGAA 2 cut(s) 89, 620
PagI TCATGA 1 cut(s) 999
PciI ACATGT 1 cut(s) 529
PfeI GAWTC 4 cut(s) 75, 126, 146, 372
PfoI TCCNGGA 1 cut(s) 251
PkrI GCNGC 7 cut(s) 261, 279, 293, 714, 717, 808, 912
PleI GAGTC 8 cut(s) 154, 176, 182, 226, 361, 815, 871, 1092
PpsI GAGTC 8 cut(s) 154, 176, 182, 226, 361, 815, 871, 1092
PscI ACATGT 1 cut(s) 529
Psp6I CCWGG 5 cut(s) 47, 171, 251, 388, 885
PspGI CCWGG 5 cut(s) 47, 171, 251, 388, 885
PspN4I GGNNCC 5 cut(s) 307, 359, 586, 779, 1142
PvuII CAGCTG 1 cut(s) 715
RruI TCGCGA 1 cut(s) 131
RsaI GTAC 3 cut(s) 431, 528, 650
RsaNI GTAC 3 cut(s) 430, 527, 649
SaqAI TTAA 2 cut(s) 882, 1116
SatI GCNGC 7 cut(s) 260, 278, 292, 713, 716, 807, 911
Sau3AI GATC 2 cut(s) 667, 1009
SchI GAGTC 8 cut(s) 154, 177, 182, 227, 361, 815, 872, 1093
ScrFI CCNGG 5 cut(s) 49, 173, 253, 390, 887
SfaNI GCATC 1 cut(s) 793
SfuI TTCGAA 2 cut(s) 89, 620
SmlI CTYRAG 1 cut(s) 920
SmoI CTYRAG 1 cut(s) 920
Sse9I AATT 4 cut(s) 11, 140, 238, 1089
SsiI CCGC 4 cut(s) 453, 806, 936, 1056
SspMI CTAG 6 cut(s) 123, 209, 302, 690, 1125, 1156
StyD4I CCNGG 5 cut(s) 47, 171, 251, 388, 885
StyI CCWWGG 2 cut(s) 301, 580
TaaI ACNGT 3 cut(s) 421, 933, 964
TaiI ACGT 1 cut(s) 858
TaqI TCGA 6 cut(s) 89, 273, 365, 370, 519, 620
TasI AATT 4 cut(s) 11, 140, 238, 1089
TatI WGTACW 2 cut(s) 429, 648
TauI GCSGC 1 cut(s) 809
TfiI GAWTC 4 cut(s) 75, 126, 146, 372
Tru1I TTAA 2 cut(s) 882, 1116
Tru9I TTAA 2 cut(s) 882, 1116
TseFI GTSAC 1 cut(s) 818
TseI GCWGC 6 cut(s) 259, 277, 291, 712, 715, 910
Tsp45I GTSAC 1 cut(s) 818
TspDTI ATGAA 3 cut(s) 426, 988, 1092
TspGWI ACGGA 2 cut(s) 73, 94
XbaI TCTAGA 1 cut(s) 208
XceI RCATGY 2 cut(s) 490, 533
XcmI CCANNNNNNNNNTGG 1 cut(s) 667
XmaJI CCTAGG 1 cut(s) 301
XspI CTAG 6 cut(s) 123, 209, 302, 690, 1125, 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.