transcription regulatory region sequence-specific DNA binding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAD_binding_6 | PF08030 | 6 - 107 | 8.4e-24 | Ferric reductase NAD binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 233 |
| AccI | GTMKAC | 1 cut(s) | 147 |
| AclWI | GGATC | 1 cut(s) | 111 |
| AflIII | ACRYGT | 1 cut(s) | 353 |
| AgsI | TTSAA | 1 cut(s) | 122 |
| AjnI | CCWGG | 1 cut(s) | 52 |
| AluBI | AGCT | 2 cut(s) | 194, 293 |
| AluI | AGCT | 2 cut(s) | 194, 293 |
| AlwI | GGATC | 1 cut(s) | 111 |
| AspS9I | GGNCC | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 2 cut(s) | 170, 172 |
| AvaII | GGWCC | 1 cut(s) | 187 |
| BanI | GGYRCC | 1 cut(s) | 233 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 315, 347 |
| BciT130I | CCWGG | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 1 cut(s) | 54 |
| Bme18I | GGWCC | 1 cut(s) | 187 |
| BmgT120I | GGNCC | 1 cut(s) | 187 |
| BmiI | GGNNCC | 1 cut(s) | 235 |
| BmrFI | CCNGG | 1 cut(s) | 54 |
| BmsI | GCATC | 2 cut(s) | 151, 310 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| BseBI | CCWGG | 1 cut(s) | 54 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseGI | GGATG | 3 cut(s) | 91, 222, 301 |
| BshNI | GGYRCC | 1 cut(s) | 233 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| Bsp19I | CCATGG | 1 cut(s) | 183 |
| BspLI | GGNNCC | 1 cut(s) | 235 |
| BspPI | GGATC | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 1 cut(s) | 233 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| BssMI | GATC | 1 cut(s) | 103 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst2UI | CCWGG | 1 cut(s) | 54 |
| Bst4CI | ACNGT | 1 cut(s) | 316 |
| Bst6I | CTCTTC | 1 cut(s) | 147 |
| BstDSI | CCRYGG | 1 cut(s) | 183 |
| BstEII | GGTNACC | 1 cut(s) | 48 |
| BstF5I | GGATG | 3 cut(s) | 91, 222, 301 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstNI | CCWGG | 1 cut(s) | 54 |
| BstPI | GGTNACC | 1 cut(s) | 48 |
| BstSCI | CCNGG | 1 cut(s) | 52 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| BtgI | CCRYGG | 1 cut(s) | 183 |
| BtsCI | GGATG | 3 cut(s) | 91, 222, 301 |
| BtsIMutI | CAGTG | 1 cut(s) | 321 |
| Cfr13I | GGNCC | 1 cut(s) | 187 |
| CviAII | CATG | 4 cut(s) | 82, 184, 203, 212 |
| CviJI | RGCY | 3 cut(s) | 57, 194, 293 |
| CviKI_1 | RGCY | 3 cut(s) | 57, 194, 293 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| DraI | TTTAAA | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco47I | GGWCC | 1 cut(s) | 187 |
| Eco91I | GGTNACC | 1 cut(s) | 48 |
| EcoO65I | GGTNACC | 1 cut(s) | 48 |
| EcoRII | CCWGG | 1 cut(s) | 52 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| FaeI | CATG | 4 cut(s) | 85, 187, 206, 215 |
| FaiI | YATR | 6 cut(s) | 83, 185, 204, 213, 229, 351 |
| FatI | CATG | 4 cut(s) | 81, 183, 202, 211 |
| FblI | GTMKAC | 1 cut(s) | 147 |
| FokI | GGATG | 3 cut(s) | 98, 209, 288 |
| Hin1II | CATG | 4 cut(s) | 85, 187, 206, 215 |
| HincII | GTYRAC | 2 cut(s) | 171, 220 |
| HindII | GTYRAC | 2 cut(s) | 171, 220 |
| HinfI | GANTC | 2 cut(s) | 78, 247 |
| HphI | GGTGA | 2 cut(s) | 170, 172 |
| Hpy166II | GTNNAC | 4 cut(s) | 148, 171, 220, 282 |
| Hpy188I | TCNGA | 1 cut(s) | 117 |
| Hpy188III | TCNNGA | 1 cut(s) | 343 |
| Hpy8I | GTNNAC | 4 cut(s) | 148, 171, 220, 282 |
| HpyCH4III | ACNGT | 1 cut(s) | 316 |
| HpyCH4IV | ACGT | 1 cut(s) | 355 |
| HpyCH4V | TGCA | 2 cut(s) | 164, 257 |
| HpySE526I | ACGT | 1 cut(s) | 355 |
| Hsp92II | CATG | 4 cut(s) | 85, 187, 206, 215 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LpnPI | CCDG | 5 cut(s) | 39, 66, 250, 348, 356 |
| LweI | GCATC | 2 cut(s) | 151, 310 |
| MaeII | ACGT | 1 cut(s) | 355 |
| MaeIII | GTNAC | 1 cut(s) | 48 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 3 cut(s) | 21, 164, 335 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MluCI | AATT | 1 cut(s) | 265 |
| MlyI | GAGTC | 2 cut(s) | 87, 241 |
| MnlI | CCTC | 2 cut(s) | 14, 148 |
| MseI | TTAA | 2 cut(s) | 72, 358 |
| MspR9I | CCNGG | 1 cut(s) | 54 |
| MvaI | CCWGG | 1 cut(s) | 54 |
| NcoI | CCATGG | 1 cut(s) | 183 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 4 cut(s) | 85, 187, 206, 215 |
| NlaIV | GGNNCC | 1 cut(s) | 235 |
| PleI | GAGTC | 2 cut(s) | 86, 241 |
| PpsI | GAGTC | 2 cut(s) | 86, 241 |
| Psp6I | CCWGG | 1 cut(s) | 52 |
| PspEI | GGTNACC | 1 cut(s) | 48 |
| PspGI | CCWGG | 1 cut(s) | 52 |
| PspN4I | GGNNCC | 1 cut(s) | 235 |
| PspPI | GGNCC | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| SaqAI | TTAA | 2 cut(s) | 72, 358 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| Sau96I | GGNCC | 1 cut(s) | 187 |
| SchI | GAGTC | 2 cut(s) | 87, 241 |
| ScrFI | CCNGG | 1 cut(s) | 54 |
| SetI | ASST | 8 cut(s) | 55, 115, 138, 170, 196, 265, 295, 358 |
| SfaNI | GCATC | 2 cut(s) | 151, 310 |
| SinI | GGWCC | 1 cut(s) | 187 |
| Sse9I | AATT | 1 cut(s) | 265 |
| StyD4I | CCNGG | 1 cut(s) | 52 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaaI | ACNGT | 1 cut(s) | 316 |
| TaiI | ACGT | 1 cut(s) | 358 |
| TaqI | TCGA | 1 cut(s) | 311 |
| TasI | AATT | 1 cut(s) | 265 |
| Tru1I | TTAA | 2 cut(s) | 72, 358 |
| Tru9I | TTAA | 2 cut(s) | 72, 358 |
| TscAI | CASTG | 1 cut(s) | 321 |
| TspDTI | ATGAA | 1 cut(s) | 102 |
| TspRI | CASTG | 1 cut(s) | 321 |
| VpaK11BI | GGWCC | 1 cut(s) | 187 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 209 |
| XmiI | GTMKAC | 1 cut(s) | 147 |