Rroxscaffold_6G00412940

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
35404360 .. 35405520
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00412940.1

Sequence Viewer

Length: 1023 bp
ATGGAGGAAGCAAACCTGCCCGAAGAGATTATAGTGCTTATCCTCTCCTGGCTGCCCGTGAAATCCTTACTCCGATTCACTTGCGTATCCAAACGCTTTCATTTCATCATTCTCTCTAACCCAAAATTTGCTAAATCACAATTTCAAGCAGCTCGTGAGCTCAAAACCCTCGATCACAGACTCCTCTACAACACAACCGTCCCTCCACTCGAATCCCTAGACTTGGAGACGCTGCCGTTATTTGGAGACTCTTCCTACCTCGAACGCAGACTCCTCTACTCCACAATCGCCCCTCGACTCGAATCCCTACACTTGGAGACGACGTCTTTTGGAGACCGTTCCTCCGTCAGAAAGCTACAGTTTCCTTTCCAGCCACCCGTCGGTCGTCTCTCGCTACTGGGCTCCTGCAATGGTATTGTATTTCTCGCCTTTGATGGGAGAGTATTCTATATCTGGAACCCATCGACTGGATTCTTCAGGAAATTACCTGATCCAGGTCTATTCGGAATCACCTCCTTCTTATCGGGGGACCCTTTGAACGAGGCACTTCATTGGCTCAATCAAGAGAACGGTATCGTGGCTTTTGATTTGGCCCAGGAGAAGTTCAGTAAAATAACAATGCCTAATTTCGATGAAAGTAGTTTAAATCAGTTCGGCTATCTTGGGGTTTCTGCTGAAGGATGCCTTTCTTTTGCTCTCTCTCTCTGGGATGCTCGTGACTGCATTCAAGTGTGGGTCATGAAAGAATATGGTGTGCATGACTCATGGACTAAGCTCTTTATCTTCAGGTTTTTGGATCCGCCAGAGGGGATGTGGTCTTTCAGTCGTTTATTGGTTTTGGAAACTAGTATTGTTGCCCACATATGCACTATGAAGGAGGTTGACAATGATTGTATTACCGACGTGAAAGGATTGATAAAGATTCTTCACAAAGAAGAGGAGAAGTGTGGTGCGTATGTGATTGAAGGCTTTGATCTTAAAATGATTCGATATCAAGAGAGTTTATGTCGGATAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

340

Amino Acids

38.92

Weight (kDa)

5.39

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 43 1.7e-09 F-box domain
F-box-like PF12937 5 - 40 8.7e-09 F-box-like
FBA_1 PF07734 179 - 337 9.4e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 326
Acc36I ACCTGC 1 cut(s) 24
AccB7I CCANNNNNTGG 1 cut(s) 467
AciI CCGC 1 cut(s) 800
AclWI GGATC 3 cut(s) 485, 791, 804
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 3 cut(s) 460, 696, 769
AcyI GRCGYC 1 cut(s) 323
AfiI CCNNNNNNNGG 8 cut(s) 223, 242, 313, 380, 435, 467, 494, 806
AgsI TTSAA 4 cut(s) 146, 538, 728, 965
AhlI ACTAGT 1 cut(s) 845
AjiI CACGTC 1 cut(s) 904
AjnI CCWGG 3 cut(s) 47, 493, 594
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
AluBI AGCT 4 cut(s) 152, 160, 355, 775
AluI AGCT 4 cut(s) 152, 160, 355, 775
Alw21I GWGCWC 1 cut(s) 162
Alw26I GTCTC 5 cut(s) 221, 240, 311, 327, 392
AlwI GGATC 3 cut(s) 485, 791, 804
AoxI GGCC 1 cut(s) 591
ApeKI GCWGC 3 cut(s) 52, 149, 232
ApoI RAATTY 1 cut(s) 125
AspS9I GGNCC 2 cut(s) 529, 592
AsuHPI GGTGA 1 cut(s) 502
AvaII GGWCC 1 cut(s) 529
BaeI ACNNNNGTAYC 2 cut(s) 69, 102
BamHI GGATCC 1 cut(s) 796
BanII GRGCYC 2 cut(s) 162, 404
BauI CACGAG 2 cut(s) 153, 714
Bbv12I GWGCWC 1 cut(s) 162
BbvI GCAGC 3 cut(s) 39, 161, 219
BccI CCATC 2 cut(s) 428, 469
BceAI ACGGC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciT130I CCWGG 3 cut(s) 49, 495, 596
BciVI GTATCC 1 cut(s) 97
BcoDI GTCTC 5 cut(s) 221, 240, 311, 327, 392
BcuI ACTAGT 1 cut(s) 845
BfaI CTAG 2 cut(s) 218, 846
BfmI CTRYAG 1 cut(s) 356
BfuAI ACCTGC 1 cut(s) 24
BfuI GTATCC 1 cut(s) 97
BisI GCNGC 3 cut(s) 53, 150, 233
BlsI GCNGC 3 cut(s) 54, 151, 234
Bme1390I CCNGG 3 cut(s) 49, 495, 596
Bme18I GGWCC 1 cut(s) 529
BmgBI CACGTC 1 cut(s) 904
BmgT120I GGNCC 2 cut(s) 529, 592
BmiI GGNNCC 5 cut(s) 403, 458, 530, 531, 798
BmrFI CCNGG 3 cut(s) 49, 495, 596
BmrI ACTGGG 1 cut(s) 407
BmsI GCATC 2 cut(s) 671, 700
BmuI ACTGGG 1 cut(s) 407
BsaHI GRCGYC 1 cut(s) 323
BsaI GGTCTC 1 cut(s) 327
BsaJI CCNNGG 1 cut(s) 594
BsaXI ACNNNNNCTCC 8 cut(s) 187, 217, 255, 285, 308, 326, 338, 356
Bsc4I CCNNNNNNNGG 8 cut(s) 223, 242, 313, 380, 435, 467, 494, 806
Bse1I ACTGG 2 cut(s) 402, 472
Bse3DI GCAATG 1 cut(s) 415
BseBI CCWGG 3 cut(s) 49, 495, 596
BseDI CCNNGG 1 cut(s) 594
BseGI GGATG 3 cut(s) 686, 715, 816
BseLI CCNNNNNNNGG 8 cut(s) 223, 242, 313, 380, 435, 467, 494, 806
BseMI GCAATG 1 cut(s) 415
BseNI ACTGG 2 cut(s) 402, 472
BseRI GAGGAG 3 cut(s) 173, 263, 953
BseXI GCAGC 3 cut(s) 39, 161, 219
Bsh1285I CGRYCG 1 cut(s) 385
BshFI GGCC 1 cut(s) 593
BsiEI CGRYCG 1 cut(s) 385
BsiHKAI GWGCWC 1 cut(s) 162
BslFI GGGAC 2 cut(s) 185, 542
BslI CCNNNNNNNGG 8 cut(s) 223, 242, 313, 380, 435, 467, 494, 806
BsmAI GTCTC 5 cut(s) 221, 240, 311, 327, 392
BsmBI CGTCTC 3 cut(s) 221, 311, 392
BsmFI GGGAC 2 cut(s) 185, 542
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 1 cut(s) 593
Bso31I GGTCTC 1 cut(s) 327
Bsp1286I GDGCHC 2 cut(s) 162, 404
Bsp143I GATC 4 cut(s) 172, 490, 796, 973
BspACI CCGC 1 cut(s) 800
BspANI GGCC 1 cut(s) 593
BspHI TCATGA 1 cut(s) 738
BspLI GGNNCC 5 cut(s) 403, 458, 530, 531, 798
BspMI ACCTGC 1 cut(s) 24
BspPI GGATC 3 cut(s) 485, 791, 804
BspTNI GGTCTC 1 cut(s) 327
BsrDI GCAATG 1 cut(s) 415
BsrI ACTGG 2 cut(s) 402, 472
BssECI CCNNGG 1 cut(s) 594
BssMI GATC 4 cut(s) 172, 490, 796, 973
BssNI GRCGYC 1 cut(s) 323
BssSI CACGAG 2 cut(s) 153, 714
Bst2BI CACGAG 2 cut(s) 153, 714
Bst2UI CCWGG 3 cut(s) 49, 495, 596
Bst4CI ACNGT 4 cut(s) 199, 338, 360, 572
Bst6I CTCTTC 3 cut(s) 18, 256, 930
BstACI GRCGYC 1 cut(s) 323
BstDEI CTNAG 1 cut(s) 771
BstENI CCTNNNNNAGG 1 cut(s) 492
BstF5I GGATG 3 cut(s) 686, 715, 816
BstKTI GATC 4 cut(s) 175, 493, 799, 976
BstMAI GTCTC 5 cut(s) 221, 240, 311, 327, 392
BstMBI GATC 4 cut(s) 172, 490, 796, 973
BstMCI CGRYCG 1 cut(s) 385
BstNI CCWGG 3 cut(s) 49, 495, 596
BstSCI CCNGG 3 cut(s) 47, 493, 594
BstSFI CTRYAG 1 cut(s) 356
BstV1I GCAGC 3 cut(s) 39, 161, 219
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
BsuI GTATCC 1 cut(s) 97
BsuRI GGCC 1 cut(s) 593
BtrI CACGTC 1 cut(s) 904
BtsCI GGATG 3 cut(s) 686, 715, 816
BveI ACCTGC 1 cut(s) 24
CciI TCATGA 1 cut(s) 738
Cfr13I GGNCC 2 cut(s) 529, 592
CseI GACGC 1 cut(s) 238
CviAII CATG 3 cut(s) 739, 758, 765
DdeI CTNAG 1 cut(s) 771
DpnI GATC 4 cut(s) 174, 492, 798, 975
DpnII GATC 4 cut(s) 172, 490, 796, 973
DraI TTTAAA 1 cut(s) 645
Eam1104I CTCTTC 3 cut(s) 18, 256, 930
EarI CTCTTC 3 cut(s) 18, 256, 930
EciI GGCGGA 1 cut(s) 789
Ecl136II GAGCTC 1 cut(s) 160
Eco24I GRGCYC 2 cut(s) 162, 404
Eco31I GGTCTC 1 cut(s) 327
Eco32I GATATC 1 cut(s) 992
Eco47I GGWCC 1 cut(s) 529
Eco53kI GAGCTC 1 cut(s) 160
Eco57I CTGAAG 3 cut(s) 460, 696, 769
EcoICRI GAGCTC 1 cut(s) 160
EcoNI CCTNNNNNAGG 1 cut(s) 492
EcoO109I RGGNCCY 1 cut(s) 529
EcoRII CCWGG 3 cut(s) 47, 493, 594
EcoRV GATATC 1 cut(s) 992
EcoT38I GRGCYC 2 cut(s) 162, 404
Esp3I CGTCTC 3 cut(s) 221, 311, 392
FaeI CATG 3 cut(s) 742, 761, 768
FalI AAGNNNNNCTT 2 cut(s) 669, 701
FaqI GGGAC 2 cut(s) 185, 542
FatI CATG 3 cut(s) 738, 757, 764
FauNDI CATATG 1 cut(s) 863
Fnu4HI GCNGC 3 cut(s) 53, 150, 233
FokI GGATG 3 cut(s) 693, 722, 823
FriOI GRGCYC 2 cut(s) 162, 404
Fsp4HI GCNGC 3 cut(s) 53, 150, 233
FspBI CTAG 2 cut(s) 218, 846
GluI GCNGC 3 cut(s) 53, 150, 233
HaeIII GGCC 1 cut(s) 593
HgaI GACGC 1 cut(s) 238
Hin1I GRCGYC 1 cut(s) 323
Hin1II CATG 3 cut(s) 742, 761, 768
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HphI GGTGA 1 cut(s) 502
Hpy166II GTNNAC 1 cut(s) 883
Hpy188I TCNGA 4 cut(s) 74, 350, 506, 1011
Hpy188III TCNNGA 7 cut(s) 155, 454, 478, 563, 716, 739, 995
Hpy8I GTNNAC 1 cut(s) 883
Hpy99I CGWCG 3 cut(s) 325, 383, 905
HpyAV CCTTC 4 cut(s) 526, 671, 868, 959
HpyCH4III ACNGT 4 cut(s) 199, 338, 360, 572
HpyCH4IV ACGT 2 cut(s) 323, 903
HpyCH4V TGCA 4 cut(s) 408, 723, 757, 867
HpyF3I CTNAG 1 cut(s) 771
HpySE526I ACGT 2 cut(s) 323, 903
Hsp92I GRCGYC 1 cut(s) 323
Hsp92II CATG 3 cut(s) 742, 761, 768
KflI GGGWCCC 1 cut(s) 529
Kzo9I GATC 4 cut(s) 172, 490, 796, 973
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 3 cut(s) 39, 161, 219
LweI GCATC 2 cut(s) 671, 700
MaeI CTAG 2 cut(s) 218, 846
MaeII ACGT 2 cut(s) 323, 903
MaeIII GTNAC 1 cut(s) 716
MalI GATC 4 cut(s) 174, 492, 798, 975
MboI GATC 4 cut(s) 172, 490, 796, 973
MboII GAAGA 6 cut(s) 35, 243, 466, 775, 917, 947
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 2 cut(s) 162, 404
MluCI AATT 4 cut(s) 125, 140, 482, 625
MlyI GAGTC 5 cut(s) 174, 242, 264, 291, 755
MmeI TCCRAC 1 cut(s) 989
MseI TTAA 2 cut(s) 644, 978
MslI CAYNNNNRTG 1 cut(s) 728
MspR9I CCNGG 3 cut(s) 49, 495, 596
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 3 cut(s) 49, 495, 596
NdeI CATATG 1 cut(s) 863
NdeII GATC 4 cut(s) 172, 490, 796, 973
NlaIII CATG 3 cut(s) 742, 761, 768
NlaIV GGNNCC 5 cut(s) 403, 458, 530, 531, 798
NmuCI GTSAC 1 cut(s) 716
PagI TCATGA 1 cut(s) 738
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 7 cut(s) 75, 212, 302, 471, 507, 922, 985
PflFI GACNNNGTC 1 cut(s) 322
PflMI CCANNNNNTGG 1 cut(s) 467
PkrI GCNGC 3 cut(s) 54, 151, 234
PleI GAGTC 5 cut(s) 174, 242, 264, 291, 755
PpsI GAGTC 5 cut(s) 174, 242, 264, 291, 755
PpuMI RGGWCCY 1 cut(s) 529
Psp124BI GAGCTC 1 cut(s) 162
Psp5II RGGWCCY 1 cut(s) 529
Psp6I CCWGG 3 cut(s) 47, 493, 594
PspGI CCWGG 3 cut(s) 47, 493, 594
PspN4I GGNNCC 5 cut(s) 403, 458, 530, 531, 798
PspPI GGNCC 2 cut(s) 529, 592
PspPPI RGGWCCY 1 cut(s) 529
PsuI RGATCY 1 cut(s) 796
PsyI GACNNNGTC 1 cut(s) 322
RseI CAYNNNNRTG 1 cut(s) 728
SacI GAGCTC 1 cut(s) 162
SaqAI TTAA 2 cut(s) 644, 978
SatI GCNGC 3 cut(s) 53, 150, 233
Sau3AI GATC 4 cut(s) 172, 490, 796, 973
Sau96I GGNCC 2 cut(s) 529, 592
SchI GAGTC 5 cut(s) 174, 242, 264, 291, 755
ScrFI CCNGG 3 cut(s) 49, 495, 596
SduI GDGCHC 2 cut(s) 162, 404
SfaNI GCATC 2 cut(s) 671, 700
SfcI CTRYAG 1 cut(s) 356
SinI GGWCC 1 cut(s) 529
SmiMI CAYNNNNRTG 1 cut(s) 728
SpeI ACTAGT 1 cut(s) 845
Sse9I AATT 4 cut(s) 125, 140, 482, 625
SsiI CCGC 1 cut(s) 800
SspMI CTAG 2 cut(s) 218, 846
SstI GAGCTC 1 cut(s) 162
StyD4I CCNGG 3 cut(s) 47, 493, 594
TaaI ACNGT 4 cut(s) 199, 338, 360, 572
TaiI ACGT 2 cut(s) 326, 906
TaqI TCGA 8 cut(s) 171, 210, 261, 295, 300, 464, 630, 988
TaqII GACCGA 1 cut(s) 371
TasI AATT 4 cut(s) 125, 140, 482, 625
TfiI GAWTC 7 cut(s) 75, 212, 302, 471, 507, 922, 985
Tru1I TTAA 2 cut(s) 644, 978
Tru9I TTAA 2 cut(s) 644, 978
TseFI GTSAC 1 cut(s) 716
TseI GCWGC 3 cut(s) 52, 149, 232
Tsp45I GTSAC 1 cut(s) 716
TspDTI ATGAA 6 cut(s) 89, 94, 539, 648, 755, 887
TspGWI ACGGA 1 cut(s) 334
Tth111I GACNNNGTC 1 cut(s) 322
Van91I CCANNNNNTGG 1 cut(s) 467
VpaK11BI GGWCC 1 cut(s) 529
XagI CCTNNNNNAGG 1 cut(s) 492
XapI RAATTY 1 cut(s) 125
XcmI CCANNNNNNNNNTGG 1 cut(s) 810
XspI CTAG 2 cut(s) 218, 846
ZraI GACGTC 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.