Rroxscaffold_3G00248120

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000082
Physical Location & Seq
Reverse (-)
41414825 .. 41417538
2714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00248120.1

Sequence Viewer

Length: 1137 bp
ATGGCGTACAACGACCTTCCTGAGGACATCATTGTGAAAATTCTGACCAGGCTTCCTGTCAAGCCTTTGGTCCGATTCCGTTGTGTTTCGAAACGGTGGCGTTCTATACTGTCCGACTCCCAGTTTGCCAAATCCCATTTTAGACTAGCCTCAGAGCAGAAAACCCTCAGTCAGAGAGTCCTCGTCTCTGGCTCATCGAGTCTTGAATCTTTAGATTTGGAAAAGCCATTCGGAATCGGAAACGAGTCTTCAGTCAGAGAACTCGCCTGCCCACTCCAGCAATTTGGGGAACGCGTCTTGCTACTGGGATCGTGCAATGGCTTGGTGTTTATAGGTCTTGAAAATTGTAAACACTTGTCTATCTGGAACCCTTTGTTAGGACTTTTACACAACTTGCCTGCCCCAGGGTTTTCGACGAAAGAGAATAGCAATGTATCTCTTTATTATCATGGTTTTGCTTATGTTTCAGCCACTGACGACTACAAAGTTATTGCGGCAGCTGATTTTGGGGATGAAGTTGAGGTTGAGGTCGAGATCTTTTCAATGAGAGCTAATATTTGGAAAAGGATTGAAGCCCCTATCAAGTTTGTAATCCAGGGAGAGGGGGTTCTTTTAAATGAGGCACTTCATTGGCTTGATGATTCGAATGTACTAGAACCAGTTATCTTTGCATTTGATTTGGTAAAGGAGGAGTTCCGAAAAATACAGCTGCCTAATTTTGATGGAGATGGCAAGGATTTCCGCCATTTGGAGGTTATTTATGGAGGACGCCTGTTAGTATATCGTTGTACATCTTGTGCTCGTGGCACTTTTCGTTATATCGATTTTTGGGTCATGGAAGAGTATGGTGTTTCCCAATCCTGGACTAAGCTGTTTGACTACGAGGTTTCCCACAAGCCTGGGTATTGGTCCCTCATACCAATCCTGGTTATGGAGACTATAACACTTACTGTGCAGATGACCTGCAGGGCTGACATTTTGGTCAAGCATGATCATAAAGAAGGGAAGCTTTCCTTTCACTTTCTTGATAGATATAAGTGGGACATGATTAAATATGAGGAGAGTTTACTTTGGCTCAGTGATTATTATGCAGTGGAAGAGAAGGTCAAAAGACTCAAAACCGAACACAAGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

378

Amino Acids

43.64

Weight (kDa)

6.04

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 44 3.3e-09 F-box-like
F-box PF00646 5 - 42 1.5e-11 F-box domain
FBA_3 PF08268 97 - 290 5.8e-17 F-box associated beta propeller domain
FBA_1 PF07734 104 - 300 1.7e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 980
Acc36I ACCTGC 1 cut(s) 971
AccII CGCG 1 cut(s) 294
AciI CCGC 2 cut(s) 494, 742
AclWI GGATC 1 cut(s) 316
AcsI RAATTY 1 cut(s) 39
AcuI CTGAAG 1 cut(s) 234
AcyI GRCGYC 1 cut(s) 769
AfaI GTAC 3 cut(s) 8, 651, 790
AfiI CCNNNNNNNGG 8 cut(s) 22, 377, 404, 601, 748, 751, 861, 931
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 4 cut(s) 206, 341, 543, 572
AjnI CCWGG 6 cut(s) 47, 403, 594, 860, 898, 924
AloI GAACNNNNNNTCC 2 cut(s) 591, 623
AluBI AGCT 5 cut(s) 500, 551, 709, 871, 1009
AluI AGCT 5 cut(s) 500, 551, 709, 871, 1009
Alw21I GWGCWC 1 cut(s) 802
Alw26I GTCTC 2 cut(s) 190, 929
AlwI GGATC 1 cut(s) 316
AlwNI CAGNNNCTG 1 cut(s) 473
ApeKI GCWGC 2 cut(s) 497, 709
ApoI RAATTY 1 cut(s) 39
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AspS9I GGNCC 2 cut(s) 70, 909
AsuII TTCGAA 2 cut(s) 89, 644
AvaII GGWCC 2 cut(s) 70, 909
AxyI CCTNAGG 1 cut(s) 21
BauI CACGAG 1 cut(s) 801
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 802
BbvI GCAGC 2 cut(s) 509, 696
BccI CCATC 2 cut(s) 716, 722
BciT130I CCWGG 6 cut(s) 49, 405, 596, 862, 900, 926
BclI TGATCA 1 cut(s) 991
BcoDI GTCTC 2 cut(s) 190, 929
BfaI CTAG 2 cut(s) 146, 653
BfmI CTRYAG 1 cut(s) 964
BfuAI ACCTGC 1 cut(s) 971
BglII AGATCT 1 cut(s) 534
BisI GCNGC 3 cut(s) 495, 498, 710
BlsI GCNGC 3 cut(s) 496, 499, 711
Bme1390I CCNGG 6 cut(s) 49, 405, 596, 862, 900, 926
Bme18I GGWCC 2 cut(s) 70, 909
BmgT120I GGNCC 2 cut(s) 70, 909
BmiI GGNNCC 2 cut(s) 368, 911
BmrFI CCNGG 6 cut(s) 49, 405, 596, 862, 900, 926
BmrI ACTGGG 2 cut(s) 115, 314
BmuI ACTGGG 2 cut(s) 115, 314
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 260
Bpu14I TTCGAA 2 cut(s) 89, 644
Bsa29I ATCGAT 1 cut(s) 822
BsaHI GRCGYC 1 cut(s) 769
BsaJI CCNNGG 4 cut(s) 403, 404, 595, 899
BsaXI ACNNNNNCTCC 2 cut(s) 591, 621
Bsc4I CCNNNNNNNGG 8 cut(s) 22, 377, 404, 601, 748, 751, 861, 931
Bse1I ACTGG 3 cut(s) 121, 309, 659
Bse21I CCTNAGG 1 cut(s) 21
Bse3DI GCAATG 2 cut(s) 322, 436
BseBI CCWGG 6 cut(s) 49, 405, 596, 862, 900, 926
BseCI ATCGAT 1 cut(s) 822
BseDI CCNNGG 4 cut(s) 403, 404, 595, 899
BseGI GGATG 1 cut(s) 517
BseLI CCNNNNNNNGG 8 cut(s) 22, 377, 404, 601, 748, 751, 861, 931
BseMI GCAATG 2 cut(s) 322, 436
BseMII CTCAG 4 cut(s) 12, 165, 181, 1090
BseNI ACTGG 3 cut(s) 121, 309, 659
BseRI GAGGAG 2 cut(s) 704, 1073
BseXI GCAGC 2 cut(s) 509, 696
BsgI GTGCAG 1 cut(s) 974
Bsh1236I CGCG 1 cut(s) 294
BshVI ATCGAT 1 cut(s) 822
BsiHKAI GWGCWC 1 cut(s) 802
BslFI GGGAC 2 cut(s) 895, 1055
BslI CCNNNNNNNGG 8 cut(s) 22, 377, 404, 601, 748, 751, 861, 931
BsmAI GTCTC 2 cut(s) 190, 929
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 2 cut(s) 895, 1055
Bsp119I TTCGAA 2 cut(s) 89, 644
Bsp1286I GDGCHC 1 cut(s) 802
Bsp1407I TGTACA 1 cut(s) 788
Bsp143I GATC 3 cut(s) 308, 534, 991
BspACI CCGC 2 cut(s) 494, 742
BspCNI CTCAG 4 cut(s) 13, 164, 180, 1089
BspDI ATCGAT 1 cut(s) 822
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 2 cut(s) 368, 911
BspMAI CTGCAG 1 cut(s) 968
BspMI ACCTGC 1 cut(s) 971
BspPI GGATC 1 cut(s) 316
BspT104I TTCGAA 2 cut(s) 89, 644
BsrDI GCAATG 2 cut(s) 322, 436
BsrGI TGTACA 1 cut(s) 788
BsrI ACTGG 3 cut(s) 121, 309, 659
BssECI CCNNGG 4 cut(s) 403, 404, 595, 899
BssMI GATC 3 cut(s) 308, 534, 991
BssNI GRCGYC 1 cut(s) 769
BssSI CACGAG 1 cut(s) 801
Bst2BI CACGAG 1 cut(s) 801
Bst2UI CCWGG 6 cut(s) 49, 405, 596, 862, 900, 926
Bst4CI ACNGT 3 cut(s) 96, 111, 952
Bst6I CTCTTC 2 cut(s) 834, 1092
BstACI GRCGYC 1 cut(s) 769
BstAUI TGTACA 1 cut(s) 788
BstBI TTCGAA 2 cut(s) 89, 644
BstC8I GCNNGC 2 cut(s) 268, 399
BstDEI CTNAG 5 cut(s) 21, 151, 167, 867, 1076
BstENI CCTNNNNNAGG 3 cut(s) 20, 375, 402
BstF5I GGATG 1 cut(s) 517
BstFNI CGCG 1 cut(s) 294
BstKTI GATC 3 cut(s) 311, 537, 994
BstMAI GTCTC 2 cut(s) 190, 929
BstMBI GATC 3 cut(s) 308, 534, 991
BstNI CCWGG 6 cut(s) 49, 405, 596, 862, 900, 926
BstSCI CCNGG 6 cut(s) 47, 403, 594, 860, 898, 924
BstSFI CTRYAG 1 cut(s) 964
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 2 cut(s) 509, 696
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 1 cut(s) 534
BstXI CCANNNNNNTGG 2 cut(s) 284, 899
BstYI RGATCY 1 cut(s) 534
Bsu15I ATCGAT 1 cut(s) 822
Bsu36I CCTNAGG 1 cut(s) 21
BsuTUI ATCGAT 1 cut(s) 822
BtsCI GGATG 1 cut(s) 517
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 3 cut(s) 471, 1084, 1098
BveI ACCTGC 1 cut(s) 971
Cac8I GCNNGC 2 cut(s) 268, 399
CaiI CAGNNNCTG 1 cut(s) 473
Cfr13I GGNCC 2 cut(s) 70, 909
ClaI ATCGAT 1 cut(s) 822
CseI GACGC 2 cut(s) 283, 777
Csp6I GTAC 3 cut(s) 7, 650, 789
CviAII CATG 4 cut(s) 449, 835, 989, 1045
CviQI GTAC 3 cut(s) 7, 650, 789
DdeI CTNAG 5 cut(s) 21, 151, 167, 867, 1076
DpnI GATC 3 cut(s) 310, 536, 993
DpnII GATC 3 cut(s) 308, 534, 991
DraI TTTAAA 1 cut(s) 615
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
Eam1104I CTCTTC 2 cut(s) 834, 1092
EarI CTCTTC 2 cut(s) 834, 1092
EciI GGCGGA 1 cut(s) 731
Eco47I GGWCC 2 cut(s) 70, 909
Eco57I CTGAAG 1 cut(s) 234
Eco81I CCTNAGG 1 cut(s) 21
EcoNI CCTNNNNNAGG 3 cut(s) 20, 375, 402
EcoRII CCWGG 6 cut(s) 47, 403, 594, 860, 898, 924
Esp3I CGTCTC 1 cut(s) 190
FaeI CATG 4 cut(s) 452, 838, 992, 1048
FalI AAGNNNNNCTT 4 cut(s) 993, 1025, 998, 1030
FaqI GGGAC 2 cut(s) 895, 1055
FatI CATG 4 cut(s) 448, 834, 988, 1044
FbaI TGATCA 1 cut(s) 991
Fnu4HI GCNGC 3 cut(s) 495, 498, 710
FokI GGATG 1 cut(s) 524
Fsp4HI GCNGC 3 cut(s) 495, 498, 710
FspBI CTAG 2 cut(s) 146, 653
GluI GCNGC 3 cut(s) 495, 498, 710
GsuI CTGGAG 1 cut(s) 260
HgaI GACGC 2 cut(s) 283, 777
Hin1I GRCGYC 1 cut(s) 769
Hin1II CATG 4 cut(s) 452, 838, 992, 1048
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 9 cut(s) 75, 116, 177, 199, 206, 234, 245, 641, 1113
Hpy166II GTNNAC 2 cut(s) 350, 1067
Hpy188I TCNGA 9 cut(s) 45, 74, 115, 154, 174, 233, 239, 257, 698
Hpy188III TCNNGA 7 cut(s) 20, 203, 338, 364, 532, 1025, 1134
Hpy8I GTNNAC 2 cut(s) 350, 1067
Hpy99I CGWCG 1 cut(s) 418
HpyAV CCTTC 3 cut(s) 26, 995, 1096
HpyCH4III ACNGT 3 cut(s) 96, 111, 952
HpyCH4V TGCA 5 cut(s) 315, 671, 955, 966, 1091
HpyF3I CTNAG 5 cut(s) 21, 151, 167, 867, 1076
Hsp92I GRCGYC 1 cut(s) 769
Hsp92II CATG 4 cut(s) 452, 838, 992, 1048
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 3 cut(s) 308, 534, 991
Lsp1109I GCAGC 2 cut(s) 509, 696
MaeI CTAG 2 cut(s) 146, 653
MalI GATC 3 cut(s) 310, 536, 993
MboI GATC 3 cut(s) 308, 534, 991
MboII GAAGA 3 cut(s) 240, 851, 1109
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 1 cut(s) 802
MluCI AATT 4 cut(s) 39, 281, 343, 715
MluI ACGCGT 1 cut(s) 292
MlyI GAGTC 5 cut(s) 110, 186, 208, 254, 1107
MmeI TCCRAC 1 cut(s) 138
MseI TTAA 2 cut(s) 614, 1050
MslI CAYNNNNRTG 1 cut(s) 32
MspA1I CMGCKG 2 cut(s) 500, 709
MspR9I CCNGG 6 cut(s) 49, 405, 596, 862, 900, 926
MvaI CCWGG 6 cut(s) 49, 405, 596, 862, 900, 926
MvnI CGCG 1 cut(s) 294
NdeII GATC 3 cut(s) 308, 534, 991
NlaIII CATG 4 cut(s) 452, 838, 992, 1048
NlaIV GGNNCC 2 cut(s) 368, 911
NspV TTCGAA 2 cut(s) 89, 644
PasI CCCWGGG 1 cut(s) 404
PfeI GAWTC 4 cut(s) 75, 206, 234, 641
PfoI TCCNGGA 1 cut(s) 860
PkrI GCNGC 3 cut(s) 496, 499, 711
PleI GAGTC 5 cut(s) 110, 185, 207, 253, 1107
PpsI GAGTC 5 cut(s) 110, 185, 207, 253, 1107
Psp6I CCWGG 6 cut(s) 47, 403, 594, 860, 898, 924
PspGI CCWGG 6 cut(s) 47, 403, 594, 860, 898, 924
PspN4I GGNNCC 2 cut(s) 368, 911
PspPI GGNCC 2 cut(s) 70, 909
PstI CTGCAG 1 cut(s) 968
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 1 cut(s) 534
PvuII CAGCTG 2 cut(s) 500, 709
RsaI GTAC 3 cut(s) 8, 651, 790
RsaNI GTAC 3 cut(s) 7, 650, 789
RseI CAYNNNNRTG 1 cut(s) 32
SaqAI TTAA 2 cut(s) 614, 1050
SatI GCNGC 3 cut(s) 495, 498, 710
Sau3AI GATC 3 cut(s) 308, 534, 991
Sau96I GGNCC 2 cut(s) 70, 909
SbfI CCTGCAGG 1 cut(s) 968
SchI GAGTC 5 cut(s) 110, 186, 208, 254, 1107
ScrFI CCNGG 6 cut(s) 49, 405, 596, 862, 900, 926
SdaI CCTGCAGG 1 cut(s) 968
SduI GDGCHC 1 cut(s) 802
SfcI CTRYAG 1 cut(s) 964
SfuI TTCGAA 2 cut(s) 89, 644
SinI GGWCC 2 cut(s) 70, 909
SmiMI CAYNNNNRTG 1 cut(s) 32
Sse8387I CCTGCAGG 1 cut(s) 968
Sse9I AATT 4 cut(s) 39, 281, 343, 715
SsiI CCGC 2 cut(s) 494, 742
SspI AATATT 1 cut(s) 556
SspMI CTAG 2 cut(s) 146, 653
StyD4I CCNGG 6 cut(s) 47, 403, 594, 860, 898, 924
TaaI ACNGT 3 cut(s) 96, 111, 952
TaqI TCGA 6 cut(s) 89, 197, 413, 531, 644, 822
TasI AATT 4 cut(s) 39, 281, 343, 715
TatI WGTACW 2 cut(s) 649, 788
TauI GCSGC 1 cut(s) 497
TfiI GAWTC 4 cut(s) 75, 206, 234, 641
Tru1I TTAA 2 cut(s) 614, 1050
Tru9I TTAA 2 cut(s) 614, 1050
TscAI CASTG 3 cut(s) 478, 1084, 1098
TseI GCWGC 2 cut(s) 497, 709
TspDTI ATGAA 2 cut(s) 528, 617
TspGWI ACGGA 1 cut(s) 68
TspRI CASTG 3 cut(s) 478, 1084, 1098
VpaK11BI GGWCC 2 cut(s) 70, 909
XagI CCTNNNNNAGG 3 cut(s) 20, 375, 402
XapI RAATTY 1 cut(s) 39
XspI CTAG 2 cut(s) 146, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.