Rmu_sc0006959.1_g000021

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006959.1
OG0000082
Physical Location & Seq
Reverse (-)
80305 .. 83296
2992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006959.1_g000021.1.cds

Sequence Viewer

Length: 1662 bp
atgtcagtagtaggcttgaagagcgacgaagccaaatttcatatggcgcaggagtgcttacccgaacatgtgatactcagaatcctggagaggttgccgatcaaatccctaatccgcttcacctccgtttcgaaacgctggcgtttcatcatctcctccgaccccaatttcgccaaatcccacttccacacagcttctcaccaccaaaccctgactcgcagactcctcctctccgacggccgtggctctcaattcgaatcccgagacctggagacgccctcgtcgttccgagacaagtcctccgtcagaaacctccggtgcccattgaagcaacccatcagacgaggaggtgatgtatgcgcactctgctcctgcaatggtttggttctcgcagctctccttgcccaacaaaacagaatgtacatctggaacccatccacttcattcttcaaacaattgcctgctcttccctcaaaatttcaatttctgcgcttttatggttttggctatgtttccgccactgatagctacaaagtcattgcaaagcgtcgtcttgaccacccacgaacggaggaggatgatgggagcgcccttatcttctcatccaaacccaacatttggaagaggatcgaatcccctcttttttccaaaatggcatataaggggactcttgtgaacgaggcacttcattggctcagctaccgtgatggggttatcattgcttttgatttggcgaaagaggagctccgaacaatgccgctgcctgagcataataatgtggagaatttcgggtatcttgaggcttttggaagctgcctgtgtgtatatgatgaggcctatattaagtctggctctgttgatttgtgggtcatgagagattatggtgttgctgactcctggactaagatgtttcgcttgaaggtttccgataggcctgaggatattaattatttgaagcctatcttggttacggaaactagtacatttctgctaaaagggacttttgatagtggtaggaagttggagtgcaagttgataaggagtggtcatgagaatgagcagcttgaaacatatatgcttagcaagcaaattgacaacatgctggcgtatgaagagagtctacttcggcctggtaaatacaataaaaggacttgcccaattgaactagccaagaaagctagaaatgcttcagaagctagaaataatggagaacagggtagagtaaatctcaatgaggataaccaggggccacatactgtcaatgtgtgtgttcaaaaccagggcagcagctctattgatgtccaagtgaaaaccaaagaaactagggcaaaggagcaggtcaagagagcaccaaacagatcaggaaaggttggagtgctatctgctgtagctcaaacatcactaacagttcaagcaaccttaaagcctgttcagtcatcatcccaaacatcccctgaagcttcgacacagccaactcaatcatcaaggaacactatgtatccgaaatctcgtgttgacccagtcactggttggtcacagaggtccaagactggggcaataaagtgtaacaagacaccagagaagccaaatcaaccaaaacaactaagcaggccaacagcagagacttctgatctcaagcagcagcccaacagagacttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

553

Amino Acids

62.58

Weight (kDa)

9.5

Isoelectric Point (pI)

54.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 280
Acc16I TGCGCA 1 cut(s) 361
Acc36I ACCTGC 1 cut(s) 1327
AccB1I GGYRCC 1 cut(s) 318
AccB7I CCANNNNNTGG 2 cut(s) 618, 1526
AccI GTMKAC 1 cut(s) 1120
AciI CCGC 3 cut(s) 115, 516, 758
AclWI GGATC 1 cut(s) 635
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 3 cut(s) 35, 476, 784
AcuI CTGAAG 2 cut(s) 1173, 1476
AcyI GRCGYC 1 cut(s) 275
AfaI GTAC 2 cut(s) 422, 982
AfiI CCNNNNNNNGG 6 cut(s) 268, 568, 618, 709, 1526, 1551
AflIII ACRYGT 1 cut(s) 67
AhlI ACTAGT 1 cut(s) 977
AjnI CCWGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
AjuI GAANNNNNNNTTGG 4 cut(s) 167, 199, 947, 979
Alw21I GWGCWC 2 cut(s) 747, 1351
Alw26I GTCTC 5 cut(s) 258, 266, 285, 1616, 1647
AlwI GGATC 1 cut(s) 635
AlwNI CAGNNNCTG 1 cut(s) 1526
Ama87I CYCGRG 1 cut(s) 261
AoxI GGCC 6 cut(s) 238, 834, 932, 1127, 1247, 1610
ApeKI GCWGC 8 cut(s) 392, 760, 813, 1060, 1284, 1287, 1639, 1642
ApoI RAATTY 3 cut(s) 35, 476, 784
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
AseI ATTAAT 1 cut(s) 945
Asp700I GAANNNNTTC 1 cut(s) 1186
AspLEI GCGC 4 cut(s) 49, 362, 492, 590
AspS9I GGNCC 2 cut(s) 1247, 1542
AsuHPI GGTGA 3 cut(s) 112, 191, 362
AsuII TTCGAA 2 cut(s) 131, 255
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 1 cut(s) 1542
AxyI CCTNAGG 1 cut(s) 936
BaeGI GKGCMC 1 cut(s) 323
BanI GGYRCC 1 cut(s) 318
BanII GRGCYC 1 cut(s) 747
BarI GAAGNNNNNNTAC 2 cut(s) 1104, 1136
BauI CACGAG 1 cut(s) 1509
Bbv12I GWGCWC 2 cut(s) 747, 1351
BbvI GCAGC 8 cut(s) 404, 747, 800, 1072, 1296, 1299, 1651, 1654
BccI CCATC 4 cut(s) 344, 442, 575, 701
BceAI ACGGC 2 cut(s) 225, 253
BciT130I CCWGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
BciVI GTATCC 1 cut(s) 1509
BcoDI GTCTC 5 cut(s) 258, 266, 285, 1616, 1647
BcuI ACTAGT 1 cut(s) 977
BfaI CTAG 5 cut(s) 978, 1166, 1179, 1197, 1323
BfmI CTRYAG 1 cut(s) 1386
BfoI RGCGCY 1 cut(s) 591
BfuAI ACCTGC 1 cut(s) 1327
BfuI GTATCC 1 cut(s) 1509
BisI GCNGC 9 cut(s) 393, 758, 761, 814, 1061, 1285, 1288, 1640, 1643
BlpI GCTNAGC 2 cut(s) 695, 1079
BlsI GCNGC 9 cut(s) 394, 759, 762, 815, 1062, 1286, 1289, 1641, 1644
Bme1390I CCNGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
Bme18I GGWCC 1 cut(s) 1542
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 2 cut(s) 1247, 1542
BmiI GGNNCC 3 cut(s) 320, 431, 1248
BmrFI CCNGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
BmrI ACTGGG 2 cut(s) 1514, 1560
BmuI ACTGGG 2 cut(s) 1514, 1560
BplI GAGNNNNNCTC 4 cut(s) 263, 295, 1212, 1244
BpmI CTGGAG 2 cut(s) 107, 290
Bpu10I CCTNAGC 1 cut(s) 765
Bpu1102I GCTNAGC 2 cut(s) 695, 1079
Bpu14I TTCGAA 2 cut(s) 131, 255
BpuEI CTTGAG 2 cut(s) 818, 1619
BsaHI GRCGYC 1 cut(s) 275
BsaI GGTCTC 1 cut(s) 258
BsaJI CCNNGG 3 cut(s) 241, 1243, 1279
BsaWI WCCGGW 1 cut(s) 315
BsaXI ACNNNNNCTCC 6 cut(s) 284, 314, 339, 369, 1016, 1046
Bsc4I CCNNNNNNNGG 6 cut(s) 268, 568, 618, 709, 1526, 1551
Bse1I ACTGG 3 cut(s) 1520, 1531, 1555
Bse21I CCTNAGG 1 cut(s) 936
Bse3DI GCAATG 3 cut(s) 382, 537, 717
BseBI CCWGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
BseDI CCNNGG 3 cut(s) 241, 1243, 1279
BseGI GGATG 5 cut(s) 434, 583, 602, 1439, 1448
BseLI CCNNNNNNNGG 6 cut(s) 268, 568, 618, 709, 1526, 1551
BseMI GCAATG 3 cut(s) 382, 537, 717
BseMII CTCAG 4 cut(s) 91, 709, 756, 927
BseNI ACTGG 3 cut(s) 1520, 1531, 1555
BseRI GAGGAG 6 cut(s) 145, 215, 218, 360, 587, 755
BseSI GKGCMC 1 cut(s) 323
BseX3I CGGCCG 1 cut(s) 238
BseXI GCAGC 8 cut(s) 404, 747, 800, 1072, 1296, 1299, 1651, 1654
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 6 cut(s) 240, 836, 934, 1129, 1249, 1612
BshNI GGYRCC 1 cut(s) 318
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 2 cut(s) 747, 1351
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 1 cut(s) 316
BslFI GGGAC 2 cut(s) 679, 1012
BslI CCNNNNNNNGG 6 cut(s) 268, 568, 618, 709, 1526, 1551
BsmAI GTCTC 5 cut(s) 258, 266, 285, 1616, 1647
BsmBI CGTCTC 1 cut(s) 266
BsmFI GGGAC 2 cut(s) 679, 1012
BsnI GGCC 6 cut(s) 240, 836, 934, 1129, 1249, 1612
Bso31I GGTCTC 1 cut(s) 258
BsoBI CYCGRG 1 cut(s) 261
Bsp119I TTCGAA 2 cut(s) 131, 255
Bsp1286I GDGCHC 3 cut(s) 323, 747, 1351
Bsp1407I TGTACA 1 cut(s) 420
Bsp143I GATC 4 cut(s) 99, 627, 1358, 1630
Bsp1720I GCTNAGC 2 cut(s) 695, 1079
BspACI CCGC 3 cut(s) 115, 516, 758
BspANI GGCC 6 cut(s) 240, 836, 934, 1129, 1249, 1612
BspCNI CTCAG 4 cut(s) 90, 708, 757, 928
BspHI TCATGA 2 cut(s) 870, 1048
BspLI GGNNCC 3 cut(s) 320, 431, 1248
BspMI ACCTGC 1 cut(s) 1327
BspPI GGATC 1 cut(s) 635
BspQI GCTCTTC 2 cut(s) 14, 471
BspT104I TTCGAA 2 cut(s) 131, 255
BspT107I GGYRCC 1 cut(s) 318
BspTNI GGTCTC 1 cut(s) 258
BsrDI GCAATG 3 cut(s) 382, 537, 717
BsrGI TGTACA 1 cut(s) 420
BsrI ACTGG 3 cut(s) 1520, 1531, 1555
BssECI CCNNGG 3 cut(s) 241, 1243, 1279
BssMI GATC 4 cut(s) 99, 627, 1358, 1630
BssNI GRCGYC 1 cut(s) 275
BssSI CACGAG 1 cut(s) 1509
Bst2BI CACGAG 1 cut(s) 1509
Bst2UI CCWGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
Bst4CI ACNGT 3 cut(s) 704, 1258, 1408
Bst6I CTCTTC 4 cut(s) 14, 471, 617, 1107
BstACI GRCGYC 1 cut(s) 275
BstAUI TGTACA 1 cut(s) 420
BstBI TTCGAA 2 cut(s) 131, 255
BstC8I GCNNGC 5 cut(s) 140, 462, 1085, 1104, 1610
BstDEI CTNAG 7 cut(s) 77, 695, 765, 903, 936, 1079, 1604
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 5 cut(s) 434, 583, 602, 1439, 1448
BstH2I RGCGCY 1 cut(s) 591
BstHHI GCGC 4 cut(s) 49, 362, 492, 590
BstKTI GATC 4 cut(s) 102, 630, 1361, 1633
BstMAI GTCTC 5 cut(s) 258, 266, 285, 1616, 1647
BstMBI GATC 4 cut(s) 99, 627, 1358, 1630
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 8 cut(s) 21, 366, 401, 766, 1084, 1175, 1184, 1193
BstNI CCWGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
BstNSI RCATGY 2 cut(s) 71, 1102
BstSCI CCNGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
BstSFI CTRYAG 1 cut(s) 1386
BstSLI GKGCMC 1 cut(s) 323
BstV1I GCAGC 8 cut(s) 404, 747, 800, 1072, 1296, 1299, 1651, 1654
BstZI CGGCCG 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 936
BsuI GTATCC 1 cut(s) 1509
BsuRI GGCC 6 cut(s) 240, 836, 934, 1129, 1249, 1612
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 5 cut(s) 434, 583, 602, 1439, 1448
BtsIMutI CAGTG 2 cut(s) 519, 1524
BveI ACCTGC 1 cut(s) 1327
Cac8I GCNNGC 5 cut(s) 140, 462, 1085, 1104, 1610
CaiI CAGNNNCTG 1 cut(s) 1526
CciI TCATGA 2 cut(s) 870, 1048
CfoI GCGC 4 cut(s) 49, 362, 492, 590
Cfr13I GGNCC 2 cut(s) 1247, 1542
CseI GACGC 2 cut(s) 283, 536
Csp6I GTAC 2 cut(s) 421, 981
CviAII CATG 4 cut(s) 68, 871, 1049, 1099
CviQI GTAC 2 cut(s) 421, 981
DdeI CTNAG 7 cut(s) 77, 695, 765, 903, 936, 1079, 1604
DpnI GATC 4 cut(s) 101, 629, 1360, 1632
DpnII GATC 4 cut(s) 99, 627, 1358, 1630
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 238
EagI CGGCCG 1 cut(s) 238
Eam1104I CTCTTC 4 cut(s) 14, 471, 617, 1107
EarI CTCTTC 4 cut(s) 14, 471, 617, 1107
EciI GGCGGA 1 cut(s) 505
Ecl136II GAGCTC 1 cut(s) 745
EclXI CGGCCG 1 cut(s) 238
Eco147I AGGCCT 2 cut(s) 836, 934
Eco24I GRGCYC 1 cut(s) 747
Eco31I GGTCTC 1 cut(s) 258
Eco47I GGWCC 1 cut(s) 1542
Eco52I CGGCCG 1 cut(s) 238
Eco53kI GAGCTC 1 cut(s) 745
Eco57I CTGAAG 2 cut(s) 1173, 1476
Eco81I CCTNAGG 1 cut(s) 936
Eco88I CYCGRG 1 cut(s) 261
EcoICRI GAGCTC 1 cut(s) 745
EcoRII CCWGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
EcoT38I GRGCYC 1 cut(s) 747
Esp3I CGTCTC 1 cut(s) 266
FaeI CATG 4 cut(s) 71, 874, 1052, 1102
FalI AAGNNNNNCTT 2 cut(s) 947, 979
FaqI GGGAC 2 cut(s) 679, 1012
FatI CATG 4 cut(s) 67, 870, 1048, 1098
FauNDI CATATG 1 cut(s) 42
FblI GTMKAC 1 cut(s) 1120
Fnu4HI GCNGC 9 cut(s) 393, 758, 761, 814, 1061, 1285, 1288, 1640, 1643
FokI GGATG 5 cut(s) 421, 589, 590, 1426, 1435
FriOI GRGCYC 1 cut(s) 747
Fsp4HI GCNGC 9 cut(s) 393, 758, 761, 814, 1061, 1285, 1288, 1640, 1643
FspAI RTGCGCAY 1 cut(s) 361
FspBI CTAG 5 cut(s) 978, 1166, 1179, 1197, 1323
FspI TGCGCA 1 cut(s) 361
GlaI GCGC 4 cut(s) 48, 361, 491, 589
GluI GCNGC 9 cut(s) 393, 758, 761, 814, 1061, 1285, 1288, 1640, 1643
GsuI CTGGAG 2 cut(s) 107, 290
HaeII RGCGCY 1 cut(s) 591
HaeIII GGCC 6 cut(s) 240, 836, 934, 1129, 1249, 1612
HapII CCGG 1 cut(s) 316
HgaI GACGC 2 cut(s) 283, 536
HhaI GCGC 4 cut(s) 49, 362, 492, 590
Hin1I GRCGYC 1 cut(s) 275
Hin1II CATG 4 cut(s) 71, 874, 1052, 1102
Hin6I GCGC 4 cut(s) 47, 360, 490, 588
HinP1I GCGC 4 cut(s) 47, 360, 490, 588
HincII GTYRAC 1 cut(s) 1516
HindII GTYRAC 1 cut(s) 1516
HindIII AAGCTT 1 cut(s) 1458
HinfI GANTC 8 cut(s) 81, 214, 222, 257, 632, 667, 893, 1117
HpaII CCGG 1 cut(s) 316
HphI GGTGA 3 cut(s) 112, 191, 362
Hpy166II GTNNAC 3 cut(s) 676, 1121, 1516
Hpy188III TCNNGA 8 cut(s) 261, 427, 554, 797, 871, 1049, 1342, 1362
Hpy8I GTNNAC 3 cut(s) 676, 1121, 1516
Hpy99I CGWCG 4 cut(s) 29, 239, 286, 552
HpyAV CCTTC 1 cut(s) 913
HpyCH4III ACNGT 3 cut(s) 704, 1258, 1408
HpyCH4V TGCA 3 cut(s) 375, 542, 1029
HpyF10VI GCNNNNNNNGC 8 cut(s) 21, 366, 401, 766, 1084, 1175, 1184, 1193
HpyF3I CTNAG 7 cut(s) 77, 695, 765, 903, 936, 1079, 1604
Hsp92I GRCGYC 1 cut(s) 275
Hsp92II CATG 4 cut(s) 71, 874, 1052, 1102
HspAI GCGC 4 cut(s) 47, 360, 490, 588
Kzo9I GATC 4 cut(s) 99, 627, 1358, 1630
LguI GCTCTTC 2 cut(s) 14, 471
LmnI GCTCC 5 cut(s) 374, 585, 742, 750, 1333
Lsp1109I GCAGC 8 cut(s) 404, 747, 800, 1072, 1296, 1299, 1651, 1654
MaeI CTAG 5 cut(s) 978, 1166, 1179, 1197, 1323
MaeIII GTNAC 4 cut(s) 967, 1522, 1533, 1565
MalI GATC 4 cut(s) 101, 629, 1360, 1632
MboI GATC 4 cut(s) 99, 627, 1358, 1630
MboII GAAGA 6 cut(s) 31, 439, 458, 589, 634, 1124
MfeI CAATTG 2 cut(s) 455, 1158
MhlI GDGCHC 3 cut(s) 323, 747, 1351
MlyI GAGTC 5 cut(s) 208, 216, 661, 887, 1126
MmeI TCCRAC 4 cut(s) 183, 258, 1002, 1351
MroXI GAANNNNTTC 1 cut(s) 1186
MseI TTAA 3 cut(s) 843, 945, 1421
MslI CAYNNNNRTG 2 cut(s) 774, 1053
MspA1I CMGCKG 1 cut(s) 760
MspI CCGG 1 cut(s) 316
MspR9I CCNGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
MunI CAATTG 2 cut(s) 455, 1158
MvaI CCWGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
MwoI GCNNNNNNNGC 8 cut(s) 21, 366, 401, 766, 1084, 1175, 1184, 1193
NdeI CATATG 1 cut(s) 42
NdeII GATC 4 cut(s) 99, 627, 1358, 1630
NlaIII CATG 4 cut(s) 71, 874, 1052, 1102
NlaIV GGNNCC 3 cut(s) 320, 431, 1248
NmuCI GTSAC 2 cut(s) 1522, 1533
NsbI TGCGCA 1 cut(s) 361
NspI RCATGY 2 cut(s) 71, 1102
NspV TTCGAA 2 cut(s) 131, 255
PagI TCATGA 2 cut(s) 870, 1048
PceI AGGCCT 2 cut(s) 836, 934
PciI ACATGT 1 cut(s) 67
PciSI GCTCTTC 2 cut(s) 14, 471
PcsI WCGNNNNNNNCGW 1 cut(s) 281
PdmI GAANNNNTTC 1 cut(s) 1186
PfeI GAWTC 3 cut(s) 81, 257, 632
PflFI GACNNNGTC 1 cut(s) 1520
PflMI CCANNNNNTGG 2 cut(s) 618, 1526
PfoI TCCNGGA 2 cut(s) 84, 896
PkrI GCNGC 9 cut(s) 394, 759, 762, 815, 1062, 1286, 1289, 1641, 1644
PleI GAGTC 5 cut(s) 208, 216, 661, 887, 1125
PpsI GAGTC 5 cut(s) 208, 216, 661, 887, 1125
PscI ACATGT 1 cut(s) 67
PshBI ATTAAT 1 cut(s) 945
Psp124BI GAGCTC 1 cut(s) 747
Psp6I CCWGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
PspGI CCWGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
PspN4I GGNNCC 3 cut(s) 320, 431, 1248
PspPI GGNCC 2 cut(s) 1247, 1542
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
PstNI CAGNNNCTG 1 cut(s) 1526
PsyI GACNNNGTC 1 cut(s) 1520
RsaI GTAC 2 cut(s) 422, 982
RsaNI GTAC 2 cut(s) 421, 981
RseI CAYNNNNRTG 2 cut(s) 774, 1053
SacI GAGCTC 1 cut(s) 747
SapI GCTCTTC 2 cut(s) 14, 471
SaqAI TTAA 3 cut(s) 843, 945, 1421
SatI GCNGC 9 cut(s) 393, 758, 761, 814, 1061, 1285, 1288, 1640, 1643
Sau3AI GATC 4 cut(s) 99, 627, 1358, 1630
Sau96I GGNCC 2 cut(s) 1247, 1542
SchI GAGTC 5 cut(s) 208, 216, 661, 887, 1126
ScrFI CCNGG 6 cut(s) 86, 269, 898, 1131, 1244, 1280
SduI GDGCHC 3 cut(s) 323, 747, 1351
SfcI CTRYAG 1 cut(s) 1386
SfuI TTCGAA 2 cut(s) 131, 255
SinI GGWCC 1 cut(s) 1542
SmiMI CAYNNNNRTG 2 cut(s) 774, 1053
SmlI CTYRAG 2 cut(s) 797, 1634
SmoI CTYRAG 2 cut(s) 797, 1634
SpeI ACTAGT 1 cut(s) 977
SseBI AGGCCT 2 cut(s) 836, 934
SsiI CCGC 3 cut(s) 115, 516, 758
SspMI CTAG 5 cut(s) 978, 1166, 1179, 1197, 1323
SstI GAGCTC 1 cut(s) 747
StuI AGGCCT 2 cut(s) 836, 934
StyD4I CCNGG 6 cut(s) 84, 267, 896, 1129, 1242, 1278
TaaI ACNGT 3 cut(s) 704, 1258, 1408
TaqI TCGA 4 cut(s) 131, 255, 630, 1463
TatI WGTACW 2 cut(s) 420, 980
TauI GCSGC 1 cut(s) 760
TfiI GAWTC 3 cut(s) 81, 257, 632
Tru1I TTAA 3 cut(s) 843, 945, 1421
Tru9I TTAA 3 cut(s) 843, 945, 1421
TscAI CASTG 2 cut(s) 526, 1531
TseFI GTSAC 2 cut(s) 1522, 1533
TseI GCWGC 8 cut(s) 392, 760, 813, 1060, 1284, 1287, 1639, 1642
Tsp45I GTSAC 2 cut(s) 1522, 1533
TspDTI ATGAA 5 cut(s) 29, 136, 432, 677, 1125
TspGWI ACGGA 4 cut(s) 115, 292, 584, 986
TspRI CASTG 2 cut(s) 526, 1531
Tth111I GACNNNGTC 1 cut(s) 1520
Van91I CCANNNNNTGG 2 cut(s) 618, 1526
VpaK11BI GGWCC 1 cut(s) 1542
VspI ATTAAT 1 cut(s) 945
XapI RAATTY 3 cut(s) 35, 476, 784
XceI RCATGY 2 cut(s) 71, 1102
XcmI CCANNNNNNNNNTGG 2 cut(s) 40, 1527
XmiI GTMKAC 1 cut(s) 1120
XmnI GAANNNNTTC 1 cut(s) 1186
XspI CTAG 5 cut(s) 978, 1166, 1179, 1197, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.