Rw3G013410

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000082
Physical Location & Seq
Reverse (-)
13244239 .. 13246789
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G013410.1

Sequence Viewer

Length: 1194 bp
ATGTTTTTTTTAATAATAAGTGAACATAGTGCAATGGAGGAAGCAAACCTCCCCGAAGAGATTGTAGTGCTTATCCTCTCCTGGCTACCCGTGAAATCCTTACTCCGATTCACCTGCGTTTCCAAACGCTTTCATTTCATCATTCTCTCTAACCCAAAATTTGCTAAATCCCAATTTCAAGCAGCTCGTGAGCGCAAAACCCTGGATCAGAGACTCCTCTACAACACAACCGTCCCTCCACTCGAATCCCTAGACTTGGAGACGCTGCCGTTATTTGGAGACTCTTCCTACCTCGAACGCAGACTCCTCTACTCCAAAATCGCCCCTCGACTCGAATCCCTACACTTGGAGACGACGTCTTTTGGAGACCGTTCCTCCGTCAGAAAGCTACAGTTTCCTTTCCAGCCACCCGTCGGTCGTCTCTCGCTACTGGGCTCCTGCAATGGTATTGTATTTCTTGCCTTTGATGAGAGAGTATTCTATATCTGGAACCCATCGACTGGATTCTTTAGGAAATTACCTGATCCAGGTTCTTTATGTGATCAAAGATTTCTGTTCAATTATGGTGTTGGCTATTTGTCGGCCACCGACGACTACAAAATTTTCATAGCCACCGATGTGTACGCCATTTTCTCGTCGAGAGCTCAAGCTTGGAAAAAACTTGAGGTCTATTCGGAATCACCGCCTTCTTTTCGGGGGACCCTTTTGAACGAGGCACTTCATTGGCTCAATCAAGAGAACGGTATCGTGGCTTTTGATTTGGCCCAGGAGAAGTTCAGTAAAATGACAATGCCTAATTTCGATGAAAGAAGTTTAAATCAGTTCGGCTATCTTGGGGTTTCTGCTGAAGGATGCCTTTCTTTTGCTCTCTCTCTGTGGGATGCTCATGACTGTATTCAAGTGTGGGTCATGAAAGAATATGGTGTGCATGACTCATGGACTAAGCTCTATAACTTCAGGTTTTTGGATCCTCCAGAGGGGATGTGGTCTTTCAGTCGTGTATTGGTTTTGGAAACTAGTATTGTTGCCCACATATGCACTATGAAGGAGGTTGACAATGATTGTATTACCGACGTGAAAGGGTTGATAAAGATTCTTCACAAAGAAGAGGAGAAGTGTGGTGAGTATGTGATTGAAGGCTTTGAACTTAAAATGATTCGATATCAAGAGAGTTTATGTCGGATAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

397

Amino Acids

45.84

Weight (kDa)

5.52

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 54 2.8e-09 F-box domain
F-box-like PF12937 16 - 51 1.7e-08 F-box-like
Beta-prop_KIB1-4 PF03478 125 - 316 5e-06 KIB1-4 beta-propeller
FBA_3 PF08268 126 - 315 1.6e-08 F-box associated beta propeller domain
FBA_1 PF07734 143 - 394 1.4e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 122
AatII GACGTC 1 cut(s) 359
Acc36I ACCTGC 1 cut(s) 122
AccB7I CCANNNNNTGG 1 cut(s) 500
AciI CCGC 1 cut(s) 683
AclWI GGATC 4 cut(s) 213, 518, 962, 975
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 2 cut(s) 158, 600
AcuI CTGAAG 2 cut(s) 867, 940
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 1 cut(s) 623
AfiI CCNNNNNNNGG 7 cut(s) 256, 275, 346, 413, 500, 527, 977
AgsI TTSAA 6 cut(s) 179, 559, 709, 899, 1136, 1145
AhlI ACTAGT 1 cut(s) 1016
AjiI CACGTC 1 cut(s) 1075
AjnI CCWGG 4 cut(s) 80, 201, 526, 765
AleI CACNNNNGTG 1 cut(s) 617
AloI GAACNNNNNNTCC 2 cut(s) 288, 320
AluBI AGCT 5 cut(s) 185, 388, 644, 650, 946
AluI AGCT 5 cut(s) 185, 388, 644, 650, 946
Alw21I GWGCWC 1 cut(s) 646
Alw26I GTCTC 6 cut(s) 205, 254, 273, 344, 360, 425
AlwI GGATC 4 cut(s) 213, 518, 962, 975
AoxI GGCC 2 cut(s) 582, 762
ApeKI GCWGC 2 cut(s) 182, 265
ApoI RAATTY 2 cut(s) 158, 600
AspLEI GCGC 1 cut(s) 195
AspS9I GGNCC 2 cut(s) 699, 763
AsuHPI GGTGA 3 cut(s) 103, 672, 1133
AvaII GGWCC 1 cut(s) 699
BamHI GGATCC 1 cut(s) 967
BanII GRGCYC 2 cut(s) 437, 646
BauI CACGAG 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 646
BbvI GCAGC 2 cut(s) 194, 252
BccI CCATC 1 cut(s) 502
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 4 cut(s) 82, 203, 528, 767
BclI TGATCA 1 cut(s) 541
BcoDI GTCTC 6 cut(s) 205, 254, 273, 344, 360, 425
BcuI ACTAGT 1 cut(s) 1016
BfaI CTAG 2 cut(s) 251, 1017
BfmI CTRYAG 1 cut(s) 389
BfuAI ACCTGC 1 cut(s) 122
BisI GCNGC 2 cut(s) 183, 266
BlsI GCNGC 2 cut(s) 184, 267
Bme1390I CCNGG 4 cut(s) 82, 203, 528, 767
Bme18I GGWCC 1 cut(s) 699
BmgBI CACGTC 1 cut(s) 1075
BmgT120I GGNCC 2 cut(s) 699, 763
BmiI GGNNCC 5 cut(s) 436, 491, 700, 701, 969
BmrFI CCNGG 4 cut(s) 82, 203, 528, 767
BmrI ACTGGG 1 cut(s) 440
BmsI GCATC 2 cut(s) 842, 871
BmuI ACTGGG 1 cut(s) 440
BpmI CTGGAG 1 cut(s) 957
BpuEI CTTGAG 2 cut(s) 630, 683
BsaHI GRCGYC 1 cut(s) 356
BsaI GGTCTC 1 cut(s) 360
BsaJI CCNNGG 2 cut(s) 201, 765
BsaXI ACNNNNNCTCC 8 cut(s) 220, 250, 288, 318, 341, 359, 371, 389
Bsc4I CCNNNNNNNGG 7 cut(s) 256, 275, 346, 413, 500, 527, 977
Bse1I ACTGG 2 cut(s) 435, 505
Bse3DI GCAATG 2 cut(s) 39, 448
BseBI CCWGG 4 cut(s) 82, 203, 528, 767
BseDI CCNNGG 2 cut(s) 201, 765
BseGI GGATG 3 cut(s) 857, 886, 987
BseLI CCNNNNNNNGG 7 cut(s) 256, 275, 346, 413, 500, 527, 977
BseMI GCAATG 2 cut(s) 39, 448
BseNI ACTGG 2 cut(s) 435, 505
BseRI GAGGAG 3 cut(s) 206, 296, 1124
BseXI GCAGC 2 cut(s) 194, 252
Bsh1285I CGRYCG 1 cut(s) 418
BshFI GGCC 2 cut(s) 584, 764
BsiEI CGRYCG 1 cut(s) 418
BsiHKAI GWGCWC 1 cut(s) 646
BslFI GGGAC 2 cut(s) 218, 712
BslI CCNNNNNNNGG 7 cut(s) 256, 275, 346, 413, 500, 527, 977
BsmAI GTCTC 6 cut(s) 205, 254, 273, 344, 360, 425
BsmBI CGTCTC 3 cut(s) 254, 344, 425
BsmFI GGGAC 2 cut(s) 218, 712
BsnI GGCC 2 cut(s) 584, 764
Bso31I GGTCTC 1 cut(s) 360
Bsp1286I GDGCHC 2 cut(s) 437, 646
Bsp143I GATC 4 cut(s) 205, 523, 541, 967
BspACI CCGC 1 cut(s) 683
BspANI GGCC 2 cut(s) 584, 764
BspHI TCATGA 2 cut(s) 886, 909
BspLI GGNNCC 5 cut(s) 436, 491, 700, 701, 969
BspMI ACCTGC 1 cut(s) 122
BspPI GGATC 4 cut(s) 213, 518, 962, 975
BspTNI GGTCTC 1 cut(s) 360
BsrDI GCAATG 2 cut(s) 39, 448
BsrI ACTGG 2 cut(s) 435, 505
BssECI CCNNGG 2 cut(s) 201, 765
BssMI GATC 4 cut(s) 205, 523, 541, 967
BssNI GRCGYC 1 cut(s) 356
BssSI CACGAG 1 cut(s) 186
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 4 cut(s) 82, 203, 528, 767
Bst4CI ACNGT 5 cut(s) 232, 371, 393, 743, 893
Bst6I CTCTTC 3 cut(s) 51, 289, 1101
BstACI GRCGYC 1 cut(s) 356
BstDEI CTNAG 1 cut(s) 942
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 3 cut(s) 857, 886, 987
BstHHI GCGC 1 cut(s) 195
BstKTI GATC 4 cut(s) 208, 526, 544, 970
BstMAI GTCTC 6 cut(s) 205, 254, 273, 344, 360, 425
BstMBI GATC 4 cut(s) 205, 523, 541, 967
BstMCI CGRYCG 1 cut(s) 418
BstNI CCWGG 4 cut(s) 82, 203, 528, 767
BstSCI CCNGG 4 cut(s) 80, 201, 526, 765
BstSFI CTRYAG 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 194, 252
BstX2I RGATCY 1 cut(s) 967
BstYI RGATCY 1 cut(s) 967
BsuRI GGCC 2 cut(s) 584, 764
BtrI CACGTC 1 cut(s) 1075
BtsCI GGATG 3 cut(s) 857, 886, 987
BveI ACCTGC 1 cut(s) 122
CciI TCATGA 2 cut(s) 886, 909
CfoI GCGC 1 cut(s) 195
Cfr13I GGNCC 2 cut(s) 699, 763
CseI GACGC 1 cut(s) 271
Csp6I GTAC 1 cut(s) 622
CviAII CATG 4 cut(s) 887, 910, 929, 936
CviQI GTAC 1 cut(s) 622
DdeI CTNAG 1 cut(s) 942
DpnI GATC 4 cut(s) 207, 525, 543, 969
DpnII GATC 4 cut(s) 205, 523, 541, 967
DraI TTTAAA 1 cut(s) 816
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 3 cut(s) 51, 289, 1101
EarI CTCTTC 3 cut(s) 51, 289, 1101
Ecl136II GAGCTC 1 cut(s) 644
Eco24I GRGCYC 2 cut(s) 437, 646
Eco31I GGTCTC 1 cut(s) 360
Eco32I GATATC 1 cut(s) 1163
Eco47I GGWCC 1 cut(s) 699
Eco53kI GAGCTC 1 cut(s) 644
Eco57I CTGAAG 2 cut(s) 867, 940
EcoICRI GAGCTC 1 cut(s) 644
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 699
EcoRII CCWGG 4 cut(s) 80, 201, 526, 765
EcoRV GATATC 1 cut(s) 1163
EcoT38I GRGCYC 2 cut(s) 437, 646
Esp3I CGTCTC 3 cut(s) 254, 344, 425
FaeI CATG 4 cut(s) 890, 913, 932, 939
FalI AAGNNNNNCTT 2 cut(s) 840, 872
FaqI GGGAC 2 cut(s) 218, 712
FatI CATG 4 cut(s) 886, 909, 928, 935
FauNDI CATATG 1 cut(s) 1034
FbaI TGATCA 1 cut(s) 541
Fnu4HI GCNGC 2 cut(s) 183, 266
FokI GGATG 3 cut(s) 864, 893, 994
FriOI GRGCYC 2 cut(s) 437, 646
Fsp4HI GCNGC 2 cut(s) 183, 266
FspBI CTAG 2 cut(s) 251, 1017
GlaI GCGC 1 cut(s) 194
GluI GCNGC 2 cut(s) 183, 266
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 2 cut(s) 584, 764
HgaI GACGC 1 cut(s) 271
HhaI GCGC 1 cut(s) 195
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 4 cut(s) 890, 913, 932, 939
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HindIII AAGCTT 1 cut(s) 648
HphI GGTGA 3 cut(s) 103, 672, 1133
Hpy166II GTNNAC 3 cut(s) 23, 622, 1054
Hpy188I TCNGA 5 cut(s) 107, 210, 383, 676, 1182
Hpy188III TCNNGA 8 cut(s) 188, 487, 639, 734, 887, 910, 974, 1166
Hpy8I GTNNAC 3 cut(s) 23, 622, 1054
Hpy99I CGWCG 5 cut(s) 358, 416, 593, 640, 1076
HpyAV CCTTC 4 cut(s) 696, 842, 1039, 1130
HpyCH4III ACNGT 5 cut(s) 232, 371, 393, 743, 893
HpyCH4IV ACGT 2 cut(s) 356, 1074
HpyCH4V TGCA 4 cut(s) 32, 441, 928, 1038
HpyF3I CTNAG 1 cut(s) 942
HpySE526I ACGT 2 cut(s) 356, 1074
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 4 cut(s) 890, 913, 932, 939
HspAI GCGC 1 cut(s) 193
KflI GGGWCCC 1 cut(s) 699
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 4 cut(s) 205, 523, 541, 967
LmnI GCTCC 1 cut(s) 440
Lsp1109I GCAGC 2 cut(s) 194, 252
LweI GCATC 2 cut(s) 842, 871
MaeI CTAG 2 cut(s) 251, 1017
MaeII ACGT 2 cut(s) 356, 1074
MalI GATC 4 cut(s) 207, 525, 543, 969
MboI GATC 4 cut(s) 205, 523, 541, 967
MboII GAAGA 4 cut(s) 68, 276, 1088, 1118
MflI RGATCY 1 cut(s) 967
MhlI GDGCHC 2 cut(s) 437, 646
MluCI AATT 6 cut(s) 158, 173, 515, 559, 600, 796
MlyI GAGTC 5 cut(s) 207, 275, 297, 324, 926
MmeI TCCRAC 1 cut(s) 1160
MseI TTAA 3 cut(s) 11, 815, 1149
MslI CAYNNNNRTG 1 cut(s) 617
MspR9I CCNGG 4 cut(s) 82, 203, 528, 767
MvaI CCWGG 4 cut(s) 82, 203, 528, 767
NdeI CATATG 1 cut(s) 1034
NdeII GATC 4 cut(s) 205, 523, 541, 967
NlaIII CATG 4 cut(s) 890, 913, 932, 939
NlaIV GGNNCC 5 cut(s) 436, 491, 700, 701, 969
OliI CACNNNNGTG 1 cut(s) 617
PagI TCATGA 2 cut(s) 886, 909
PaqCI CACCTGC 1 cut(s) 122
PfeI GAWTC 7 cut(s) 108, 245, 335, 504, 677, 1093, 1156
PflFI GACNNNGTC 1 cut(s) 355
PflMI CCANNNNNTGG 1 cut(s) 500
PkrI GCNGC 2 cut(s) 184, 267
PleI GAGTC 5 cut(s) 207, 275, 297, 324, 926
PpsI GAGTC 5 cut(s) 207, 275, 297, 324, 926
PpuMI RGGWCCY 1 cut(s) 699
Psp124BI GAGCTC 1 cut(s) 646
Psp5II RGGWCCY 1 cut(s) 699
Psp6I CCWGG 4 cut(s) 80, 201, 526, 765
PspGI CCWGG 4 cut(s) 80, 201, 526, 765
PspN4I GGNNCC 5 cut(s) 436, 491, 700, 701, 969
PspPI GGNCC 2 cut(s) 699, 763
PspPPI RGGWCCY 1 cut(s) 699
PsuI RGATCY 1 cut(s) 967
PsyI GACNNNGTC 1 cut(s) 355
RsaI GTAC 1 cut(s) 623
RsaNI GTAC 1 cut(s) 622
RseI CAYNNNNRTG 1 cut(s) 617
SacI GAGCTC 1 cut(s) 646
SaqAI TTAA 3 cut(s) 11, 815, 1149
SatI GCNGC 2 cut(s) 183, 266
Sau3AI GATC 4 cut(s) 205, 523, 541, 967
Sau96I GGNCC 2 cut(s) 699, 763
SchI GAGTC 5 cut(s) 207, 275, 297, 324, 926
ScrFI CCNGG 4 cut(s) 82, 203, 528, 767
SduI GDGCHC 2 cut(s) 437, 646
SfaNI GCATC 2 cut(s) 842, 871
SfcI CTRYAG 1 cut(s) 389
SinI GGWCC 1 cut(s) 699
SmiMI CAYNNNNRTG 1 cut(s) 617
SmlI CTYRAG 2 cut(s) 645, 662
SmoI CTYRAG 2 cut(s) 645, 662
SpeI ACTAGT 1 cut(s) 1016
Sse9I AATT 6 cut(s) 158, 173, 515, 559, 600, 796
SsiI CCGC 1 cut(s) 683
SspMI CTAG 2 cut(s) 251, 1017
SstI GAGCTC 1 cut(s) 646
StyD4I CCNGG 4 cut(s) 80, 201, 526, 765
TaaI ACNGT 5 cut(s) 232, 371, 393, 743, 893
TaiI ACGT 2 cut(s) 359, 1077
TaqI TCGA 8 cut(s) 243, 294, 328, 333, 497, 638, 801, 1159
TaqII GACCGA 1 cut(s) 404
TasI AATT 6 cut(s) 158, 173, 515, 559, 600, 796
TfiI GAWTC 7 cut(s) 108, 245, 335, 504, 677, 1093, 1156
Tru1I TTAA 3 cut(s) 11, 815, 1149
Tru9I TTAA 3 cut(s) 11, 815, 1149
TseI GCWGC 2 cut(s) 182, 265
TspDTI ATGAA 7 cut(s) 122, 127, 595, 710, 819, 926, 1058
TspGWI ACGGA 1 cut(s) 367
Tth111I GACNNNGTC 1 cut(s) 355
Van91I CCANNNNNTGG 1 cut(s) 500
VpaK11BI GGWCC 1 cut(s) 699
XagI CCTNNNNNAGG 1 cut(s) 525
XapI RAATTY 2 cut(s) 158, 600
XcmI CCANNNNNNNNNTGG 1 cut(s) 981
XspI CTAG 2 cut(s) 251, 1017
ZraI GACGTC 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.