FvH4_3g14954

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000082
Physical Location & Seq
Forward (+)
9268823 .. 9272036
3214 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14954.t2

Sequence Viewer

Length: 1101 bp
ATGGCGGAAAGTGACCTACCTGAAGAAGTTATGATGAGTATTCTGTGCTGGTTGCCCGTGAAATCCTTGATCCGATTCACCTCCGTTTCGAAACGATGGCGTTTCATCATCTTATCCGACCCCAAATTCGCCACATCCCAATCCAACGCTGCTCGTCAGCGGAAAACCCTCGGTCGCCGTCTCATCTTCTCCGCCGAAGCCCCTCGGCTCGCATCTCAGCTCGTATCCCTAGACTTGGCTGATACGGCGTCGTTTGGACACCCTTCTTCCTCTGTCAGACACCTGACACTCCCTTTCGAGCGACTGGGAGGCGGCCCTCCACGTGACGTCAGGGCGTTCAGGCTACTGGGCTCCTGCAATGGTTTGGTGTTTGTAGCCTTCGCTGTTTCCAGCTTTTACATCTGGAACCCAGCAACCGGAATCTTCAAGGAGCTGCCGAAGCCGGGTTTTCCCCACAGCTGTCGAGAGCTCACTTATTACGGTGCCGGTTATTTGTCCGCCACTGACGACTACAGAGTTTTCGCAACCTCATATGGGGTGTATTCAGATGGAGACTCGTATGATGTTCAGAAGATGTTCTCCTCCAGAGCTCACGTTTGGAAAACAATCCAAGACCCTTGTCCTTACAAAGCCTCTCCTAACCAGGCTATTCTTTTGAATGAGGCACTTCACTGGGTCAAGCATAATGTACTCCTTGCTTTCGATTTCGCGCAGGAGCAGTTCAGGACAATGCGTGTACCTGGTACTGACGGCCTAGGTTTCAAGAATGCTGGGGTTTCTGAGGGATGCCTGTGTGTGTGCCGTTATCTGAGTGCCTGCTCTGTCGATTTCTGGGTCATGAGAGAATATGGTGTGGATGACTCGTGGACTAAGCTGTTTAACTTTTCCCCTGTTGCTCCACGCCGGTACGAAGATTTCTTTGTTATGGATAGCTGTACAGTTGCCTTAAAATGGGCTATGGGTCTCCAACAGGCGTTGGTAAAGATCGATCATAAACAAGAAGAGGAAATTGGCAAGTATATGCTTCCCGTCATGTTAAGCAACTGGTACCGGGTTAGCATGATTCCATACCAAGAGAGTCTACTTTGGATTTATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

367

Amino Acids

41.6

Weight (kDa)

8.29

Isoelectric Point (pI)

49.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 42 2e-10 F-box domain
F-box-like PF12937 4 - 40 1.7e-08 F-box-like
FBA_3 PF08268 112 - 293 2.1e-08 F-box associated beta propeller domain
FBA_1 PF07734 117 - 325 6e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 330
Acc65I GGTACC 1 cut(s) 1047
AccB1I GGYRCC 2 cut(s) 482, 1047
AccI GTMKAC 1 cut(s) 1081
AccII CGCG 1 cut(s) 710
AciI CCGC 5 cut(s) 5, 160, 192, 312, 498
AclWI GGATC 1 cut(s) 64
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 1 cut(s) 42
AcvI CACGTG 1 cut(s) 323
AcyI GRCGYC 2 cut(s) 248, 327
AfaI GTAC 6 cut(s) 690, 738, 745, 908, 937, 1049
AfiI CCNNNNNNNGG 5 cut(s) 235, 416, 443, 534, 951
AgsI TTSAA 3 cut(s) 427, 658, 763
AjnI CCWGG 2 cut(s) 642, 739
AjuI GAANNNNNNNTTGG 2 cut(s) 993, 1025
AluBI AGCT 8 cut(s) 220, 393, 433, 459, 469, 590, 874, 933
AluI AGCT 8 cut(s) 220, 393, 433, 459, 469, 590, 874, 933
Alw21I GWGCWC 2 cut(s) 471, 592
Alw26I GTCTC 3 cut(s) 185, 546, 968
AlwI GGATC 1 cut(s) 64
AoxI GGCC 2 cut(s) 313, 751
ApeKI GCWGC 2 cut(s) 149, 433
ApoI RAATTY 1 cut(s) 125
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp700I GAANNNNTTC 1 cut(s) 575
Asp718I GGTACC 1 cut(s) 1047
AspA2I CCTAGG 1 cut(s) 754
AspLEI GCGC 1 cut(s) 712
AspS9I GGNCC 1 cut(s) 314
AsuC2I CCSGG 2 cut(s) 444, 1052
AsuHPI GGTGA 1 cut(s) 70
AsuII TTCGAA 1 cut(s) 89
AvrII CCTAGG 1 cut(s) 754
BanI GGYRCC 2 cut(s) 482, 1047
BanII GRGCYC 3 cut(s) 353, 471, 592
BauI CACGAG 1 cut(s) 862
BbrPI CACGTG 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 471, 592
BbvI GCAGC 2 cut(s) 136, 420
BccI CCATC 2 cut(s) 90, 542
BceAI ACGGC 4 cut(s) 162, 261, 766, 786
BciT130I CCWGG 2 cut(s) 644, 741
BciVI GTATCC 1 cut(s) 235
BcnI CCSGG 2 cut(s) 444, 1052
BcoDI GTCTC 3 cut(s) 185, 546, 968
BfaI CTAG 2 cut(s) 230, 755
BfmI CTRYAG 1 cut(s) 511
BfuI GTATCC 1 cut(s) 235
BisI GCNGC 3 cut(s) 150, 313, 434
BlnI CCTAGG 1 cut(s) 754
BlsI GCNGC 3 cut(s) 151, 314, 435
Bme1390I CCNGG 4 cut(s) 444, 644, 741, 1052
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 4 cut(s) 352, 407, 484, 1049
BmrFI CCNGG 4 cut(s) 444, 644, 741, 1052
BmrI ACTGGG 3 cut(s) 314, 356, 682
BmsI GCATC 2 cut(s) 221, 776
BmuI ACTGGG 3 cut(s) 314, 356, 682
BoxI GACNNNNGTC 1 cut(s) 618
BpmI CTGGAG 1 cut(s) 568
Bpu14I TTCGAA 1 cut(s) 89
BpuMI CCSGG 2 cut(s) 444, 1052
Bsa29I ATCGAT 1 cut(s) 987
BsaAI YACGTR 1 cut(s) 323
BsaHI GRCGYC 2 cut(s) 248, 327
BsaI GGTCTC 1 cut(s) 968
BsaJI CCNNGG 3 cut(s) 169, 203, 754
BsaWI WCCGGW 1 cut(s) 416
Bsc4I CCNNNNNNNGG 5 cut(s) 235, 416, 443, 534, 951
Bse118I RCCGGY 2 cut(s) 485, 903
Bse1I ACTGG 4 cut(s) 309, 351, 677, 1049
Bse3DI GCAATG 1 cut(s) 364
BseBI CCWGG 2 cut(s) 644, 741
BseCI ATCGAT 1 cut(s) 987
BseDI CCNNGG 3 cut(s) 169, 203, 754
BseGI GGATG 3 cut(s) 134, 791, 862
BseLI CCNNNNNNNGG 5 cut(s) 235, 416, 443, 534, 951
BseMI GCAATG 1 cut(s) 364
BseMII CTCAG 3 cut(s) 230, 771, 800
BseNI ACTGG 4 cut(s) 309, 351, 677, 1049
BseRI GAGGAG 1 cut(s) 571
BseXI GCAGC 2 cut(s) 136, 420
BseYI CCCAGC 2 cut(s) 409, 770
Bsh1236I CGCG 1 cut(s) 710
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 2 cut(s) 315, 753
BshNI GGYRCC 2 cut(s) 482, 1047
BshVI ATCGAT 1 cut(s) 987
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 2 cut(s) 471, 592
BsiSI CCGG 5 cut(s) 417, 443, 486, 904, 1051
BslI CCNNNNNNNGG 5 cut(s) 235, 416, 443, 534, 951
BsmAI GTCTC 3 cut(s) 185, 546, 968
BsmBI CGTCTC 1 cut(s) 185
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 2 cut(s) 315, 753
Bso31I GGTCTC 1 cut(s) 968
Bsp119I TTCGAA 1 cut(s) 89
Bsp1286I GDGCHC 3 cut(s) 353, 471, 592
Bsp1407I TGTACA 1 cut(s) 935
Bsp143I GATC 3 cut(s) 69, 984, 988
BspACI CCGC 5 cut(s) 5, 160, 192, 312, 498
BspANI GGCC 2 cut(s) 315, 753
BspCNI CTCAG 3 cut(s) 229, 772, 801
BspDI ATCGAT 1 cut(s) 987
BspFNI CGCG 1 cut(s) 710
BspHI TCATGA 1 cut(s) 837
BspLI GGNNCC 4 cut(s) 352, 407, 484, 1049
BspPI GGATC 1 cut(s) 64
BspT104I TTCGAA 1 cut(s) 89
BspT107I GGYRCC 2 cut(s) 482, 1047
BspTNI GGTCTC 1 cut(s) 968
BsrDI GCAATG 1 cut(s) 364
BsrFI RCCGGY 2 cut(s) 485, 903
BsrGI TGTACA 1 cut(s) 935
BsrI ACTGG 4 cut(s) 309, 351, 677, 1049
BssAI RCCGGY 2 cut(s) 485, 903
BssECI CCNNGG 3 cut(s) 169, 203, 754
BssMI GATC 3 cut(s) 69, 984, 988
BssNI GRCGYC 2 cut(s) 248, 327
BssSI CACGAG 1 cut(s) 862
BssT1I CCWWGG 1 cut(s) 754
Bst2BI CACGAG 1 cut(s) 862
Bst2UI CCWGG 2 cut(s) 644, 741
Bst4CI ACNGT 2 cut(s) 482, 940
Bst6I CTCTTC 1 cut(s) 996
BstACI GRCGYC 2 cut(s) 248, 327
BstAUI TGTACA 1 cut(s) 935
BstBAI YACGTR 1 cut(s) 323
BstBI TTCGAA 1 cut(s) 89
BstC8I GCNNGC 2 cut(s) 210, 817
BstDEI CTNAG 4 cut(s) 216, 780, 809, 870
BstF5I GGATG 3 cut(s) 134, 791, 862
BstFNI CGCG 1 cut(s) 710
BstHHI GCGC 1 cut(s) 712
BstKTI GATC 3 cut(s) 72, 987, 991
BstMAI GTCTC 3 cut(s) 185, 546, 968
BstMBI GATC 3 cut(s) 69, 984, 988
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 2 cut(s) 245, 439
BstNI CCWGG 2 cut(s) 644, 741
BstPAI GACNNNNGTC 1 cut(s) 618
BstSCI CCNGG 4 cut(s) 442, 642, 739, 1050
BstSFI CTRYAG 1 cut(s) 511
BstUI CGCG 1 cut(s) 710
BstV1I GCAGC 2 cut(s) 136, 420
Bsu15I ATCGAT 1 cut(s) 987
BsuI GTATCC 1 cut(s) 235
BsuRI GGCC 2 cut(s) 315, 753
BsuTUI ATCGAT 1 cut(s) 987
BtsCI GGATG 3 cut(s) 134, 791, 862
BtsIMutI CAGTG 2 cut(s) 501, 670
Cac8I GCNNGC 2 cut(s) 210, 817
CciI TCATGA 1 cut(s) 837
CfoI GCGC 1 cut(s) 712
Cfr10I RCCGGY 2 cut(s) 485, 903
Cfr13I GGNCC 1 cut(s) 314
ClaI ATCGAT 1 cut(s) 987
CseI GACGC 1 cut(s) 237
CsiI ACCWGGT 1 cut(s) 739
Csp6I GTAC 6 cut(s) 689, 737, 744, 907, 936, 1048
CviAII CATG 3 cut(s) 838, 1033, 1060
CviQI GTAC 6 cut(s) 689, 737, 744, 907, 936, 1048
DdeI CTNAG 4 cut(s) 216, 780, 809, 870
DpnI GATC 3 cut(s) 71, 986, 990
DpnII GATC 3 cut(s) 69, 984, 988
Eam1104I CTCTTC 1 cut(s) 996
EarI CTCTTC 1 cut(s) 996
EciI GGCGGA 3 cut(s) 20, 181, 487
Ecl136II GAGCTC 2 cut(s) 469, 590
Eco130I CCWWGG 1 cut(s) 754
Eco24I GRGCYC 3 cut(s) 353, 471, 592
Eco31I GGTCTC 1 cut(s) 968
Eco53kI GAGCTC 2 cut(s) 469, 590
Eco57I CTGAAG 1 cut(s) 42
Eco72I CACGTG 1 cut(s) 323
EcoICRI GAGCTC 2 cut(s) 469, 590
EcoRII CCWGG 2 cut(s) 642, 739
EcoT14I CCWWGG 1 cut(s) 754
EcoT38I GRGCYC 3 cut(s) 353, 471, 592
ErhI CCWWGG 1 cut(s) 754
Esp3I CGTCTC 1 cut(s) 185
FaeI CATG 3 cut(s) 841, 1036, 1063
FatI CATG 3 cut(s) 837, 1032, 1059
FauNDI CATATG 1 cut(s) 532
FblI GTMKAC 1 cut(s) 1081
Fnu4HI GCNGC 3 cut(s) 150, 313, 434
FokI GGATG 3 cut(s) 121, 798, 869
FriOI GRGCYC 3 cut(s) 353, 471, 592
Fsp4HI GCNGC 3 cut(s) 150, 313, 434
FspBI CTAG 2 cut(s) 230, 755
GlaI GCGC 1 cut(s) 711
GluI GCNGC 3 cut(s) 150, 313, 434
GsaI CCCAGC 2 cut(s) 413, 774
GsuI CTGGAG 1 cut(s) 568
HaeIII GGCC 2 cut(s) 315, 753
HapII CCGG 5 cut(s) 417, 443, 486, 904, 1051
HgaI GACGC 1 cut(s) 237
HhaI GCGC 1 cut(s) 712
Hin1I GRCGYC 2 cut(s) 248, 327
Hin1II CATG 3 cut(s) 841, 1036, 1063
Hin6I GCGC 1 cut(s) 710
HinP1I GCGC 1 cut(s) 710
HinfI GANTC 6 cut(s) 75, 420, 554, 860, 1063, 1078
HpaII CCGG 5 cut(s) 417, 443, 486, 904, 1051
HphI GGTGA 1 cut(s) 70
Hpy166II GTNNAC 3 cut(s) 737, 867, 1082
Hpy188I TCNGA 7 cut(s) 74, 118, 278, 547, 570, 781, 810
Hpy188III TCNNGA 6 cut(s) 403, 464, 585, 724, 763, 838
Hpy8I GTNNAC 3 cut(s) 737, 867, 1082
Hpy99I CGWCG 1 cut(s) 253
HpyAV CCTTC 2 cut(s) 273, 388
HpyCH4III ACNGT 2 cut(s) 482, 940
HpyCH4IV ACGT 3 cut(s) 322, 327, 594
HpyCH4V TGCA 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 2 cut(s) 245, 439
HpyF3I CTNAG 4 cut(s) 216, 780, 809, 870
HpySE526I ACGT 3 cut(s) 322, 327, 594
Hsp92I GRCGYC 2 cut(s) 248, 327
Hsp92II CATG 3 cut(s) 841, 1036, 1063
HspAI GCGC 1 cut(s) 710
KpnI GGTACC 1 cut(s) 1051
Kzo9I GATC 3 cut(s) 69, 984, 988
LmnI GCTCC 4 cut(s) 356, 430, 715, 901
Lsp1109I GCAGC 2 cut(s) 136, 420
LweI GCATC 2 cut(s) 221, 776
MabI ACCWGGT 1 cut(s) 739
MaeI CTAG 2 cut(s) 230, 755
MaeII ACGT 3 cut(s) 322, 327, 594
MaeIII GTNAC 2 cut(s) 11, 323
MalI GATC 3 cut(s) 71, 986, 990
MboI GATC 3 cut(s) 69, 984, 988
MboII GAAGA 7 cut(s) 35, 178, 258, 415, 583, 923, 1013
MhlI GDGCHC 3 cut(s) 353, 471, 592
MluCI AATT 2 cut(s) 125, 1008
MlyI GAGTC 3 cut(s) 548, 854, 1087
MmeI TCCRAC 3 cut(s) 141, 168, 991
MroXI GAANNNNTTC 1 cut(s) 575
MseI TTAA 3 cut(s) 879, 947, 1037
MspA1I CMGCKG 2 cut(s) 160, 459
MspI CCGG 5 cut(s) 417, 443, 486, 904, 1051
MspR9I CCNGG 4 cut(s) 444, 644, 741, 1052
Mva1269I GAATGC 1 cut(s) 772
MvaI CCWGG 2 cut(s) 644, 741
MvnI CGCG 1 cut(s) 710
MwoI GCNNNNNNNGC 2 cut(s) 245, 439
NciI CCSGG 2 cut(s) 444, 1052
NdeI CATATG 1 cut(s) 532
NdeII GATC 3 cut(s) 69, 984, 988
NlaIII CATG 3 cut(s) 841, 1036, 1063
NlaIV GGNNCC 4 cut(s) 352, 407, 484, 1049
NmeAIII GCCGAG 1 cut(s) 184
NmuCI GTSAC 2 cut(s) 11, 323
NspV TTCGAA 1 cut(s) 89
PagI TCATGA 1 cut(s) 837
PctI GAATGC 1 cut(s) 772
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 3 cut(s) 75, 420, 1063
PkrI GCNGC 3 cut(s) 151, 314, 435
PleI GAGTC 3 cut(s) 548, 854, 1086
PmaCI CACGTG 1 cut(s) 323
PmlI CACGTG 1 cut(s) 323
PpsI GAGTC 3 cut(s) 548, 854, 1086
Ppu21I YACGTR 1 cut(s) 323
PshAI GACNNNNGTC 1 cut(s) 618
Psp124BI GAGCTC 2 cut(s) 471, 592
Psp6I CCWGG 2 cut(s) 642, 739
PspCI CACGTG 1 cut(s) 323
PspFI CCCAGC 2 cut(s) 409, 770
PspGI CCWGG 2 cut(s) 642, 739
PspN4I GGNNCC 4 cut(s) 352, 407, 484, 1049
PspPI GGNCC 1 cut(s) 314
PvuII CAGCTG 1 cut(s) 459
RsaI GTAC 6 cut(s) 690, 738, 745, 908, 937, 1049
RsaNI GTAC 6 cut(s) 689, 737, 744, 907, 936, 1048
SacI GAGCTC 2 cut(s) 471, 592
SaqAI TTAA 3 cut(s) 879, 947, 1037
SatI GCNGC 3 cut(s) 150, 313, 434
Sau3AI GATC 3 cut(s) 69, 984, 988
Sau96I GGNCC 1 cut(s) 314
SchI GAGTC 3 cut(s) 548, 854, 1087
ScrFI CCNGG 4 cut(s) 444, 644, 741, 1052
SduI GDGCHC 3 cut(s) 353, 471, 592
SexAI ACCWGGT 1 cut(s) 739
SfaNI GCATC 2 cut(s) 221, 776
SfcI CTRYAG 1 cut(s) 511
SfuI TTCGAA 1 cut(s) 89
Sse9I AATT 2 cut(s) 125, 1008
SsiI CCGC 5 cut(s) 5, 160, 192, 312, 498
SspMI CTAG 2 cut(s) 230, 755
SstI GAGCTC 2 cut(s) 471, 592
StyD4I CCNGG 4 cut(s) 442, 642, 739, 1050
StyI CCWWGG 1 cut(s) 754
TaaI ACNGT 2 cut(s) 482, 940
TaiI ACGT 3 cut(s) 325, 330, 597
TaqI TCGA 6 cut(s) 89, 297, 463, 702, 825, 987
TaqII GACCGA 1 cut(s) 161
TasI AATT 2 cut(s) 125, 1008
TatI WGTACW 2 cut(s) 688, 935
TauI GCSGC 1 cut(s) 315
TfiI GAWTC 3 cut(s) 75, 420, 1063
Tru1I TTAA 3 cut(s) 879, 947, 1037
Tru9I TTAA 3 cut(s) 879, 947, 1037
TscAI CASTG 2 cut(s) 508, 677
TseFI GTSAC 2 cut(s) 11, 323
TseI GCWGC 2 cut(s) 149, 433
Tsp45I GTSAC 2 cut(s) 11, 323
TspDTI ATGAA 1 cut(s) 94
TspGWI ACGGA 1 cut(s) 73
TspRI CASTG 2 cut(s) 508, 677
XapI RAATTY 1 cut(s) 125
XmaJI CCTAGG 1 cut(s) 754
XmiI GTMKAC 1 cut(s) 1081
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 2 cut(s) 230, 755
ZraI GACGTC 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.