Rmu_sc0001484.1_g000034

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001484.1
OG0000082
Physical Location & Seq
Forward (+)
151243 .. 152411
1169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001484.1_g000034.1.cds

Sequence Viewer

Length: 1077 bp
atgtactataacaggacgacgtacatcgttaatttctatctcactctctcgtttctaacgctcagagctttagctctcatcgcctccttccttctcctttgtcatcttcgttttagtgcaatggcggaaacagaagcgctatctgaagatattatagtgaacatccttactcggttgcccgtcaagtccttaatccgatccacctccgtttccaaacgcctgcattccattatattgtccgatcccaaattcgccctatcccaacttaaagcagctcgtcagcagaaaaccctcagccgcagactcctcgtctccaccgagactcttccactcgaatccctacacttgggtgatacggcgtcgtttggagagcattcgtccgttagaaagctcagcttccctttccagccacaaccgggcggttctgtcaagctgctgggctcctgcaatggtctggtatttgtagctgttgagaataaatccctttatatctggaacccatcgattgggttcttgaagcaattacctgatccaggttttccctttgctgataatgtgctaccctattatgctgttggctatctatccgctactgatgactacaaagttttggtagcctcctgtgacttttggttagaggtcaagatgttctcatcgagaactcgcatttggcagaggattgaatccccttgccgctccgactttcgactctttcgtggtcagggaactctttcgaatgatgcatttcattggctaagctacagcgacgatgacgaggaagaggagcatgaaatagtttcttttgacttgcaagaggaggtgttccagagaatgccactgcctaatttcgaccatgatggtaagacttacaccagtcttggggtttatggagggtgcctgtgtgtatcgcgcgcctctctaatccgcctgagctgccctcgttttccagacaattcttggccgggtgtggaaagtagtacatttgccgcgagttggactgacgaggggtcccagttgataaggattgatcataaagaagacgacaagcttgggcggtatatgctgaagtaccggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

358

Amino Acids

40.71

Weight (kDa)

6.46

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 894
AccB7I CCANNNNNTGG 1 cut(s) 506
AccBSI CCGCTC 1 cut(s) 696
AccII CGCG 3 cut(s) 910, 912, 989
AciI CCGC 8 cut(s) 125, 298, 420, 588, 694, 925, 987, 1054
AclWI GGATC 3 cut(s) 192, 236, 524
AcoI YGGCCR 1 cut(s) 959
AcsI RAATTY 1 cut(s) 248
AcuI CTGAAG 1 cut(s) 165
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 4 cut(s) 5, 23, 979, 1070
AfeI AGCGCT 1 cut(s) 138
AfiI CCNNNNNNNGG 6 cut(s) 346, 416, 506, 533, 879, 993
AgeI ACCGGT 1 cut(s) 1071
AgsI TTSAA 2 cut(s) 517, 683
AhdI GACNNNNNGTC 2 cut(s) 308, 1006
AjnI CCWGG 1 cut(s) 532
AjuI GAANNNNNNNTTGG 2 cut(s) 652, 684
AleI CACNNNNGTG 1 cut(s) 348
Alw26I GTCTC 2 cut(s) 314, 316
AlwI GGATC 3 cut(s) 192, 236, 524
Aor51HI AGCGCT 1 cut(s) 138
AoxI GGCC 1 cut(s) 959
ApeKI GCWGC 3 cut(s) 272, 433, 933
ApoI RAATTY 1 cut(s) 248
AsiGI ACCGGT 1 cut(s) 1071
Asp700I GAANNNNTTC 1 cut(s) 730
AspLEI GCGC 3 cut(s) 139, 912, 914
AspS9I GGNCC 1 cut(s) 1008
AsuC2I CCSGG 2 cut(s) 417, 963
AsuHPI GGTGA 1 cut(s) 362
AsuII TTCGAA 1 cut(s) 734
AvaII GGWCC 1 cut(s) 1008
BanI GGYRCC 1 cut(s) 894
BanII GRGCYC 1 cut(s) 443
BbsI GAAGAC 1 cut(s) 1044
BbvCI CCTCAGC 1 cut(s) 293
BbvI GCAGC 3 cut(s) 284, 420, 920
BccI CCATC 2 cut(s) 508, 851
BceAI ACGGC 1 cut(s) 372
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 1 cut(s) 534
BclI TGATCA 1 cut(s) 1027
BcnI CCSGG 2 cut(s) 417, 963
BcoDI GTCTC 2 cut(s) 314, 316
BfmI CTRYAG 1 cut(s) 760
BfoI RGCGCY 1 cut(s) 140
BisI GCNGC 6 cut(s) 273, 298, 434, 694, 934, 987
BlpI GCTNAGC 2 cut(s) 392, 755
BlsI GCNGC 6 cut(s) 274, 299, 435, 695, 935, 988
Bme1390I CCNGG 3 cut(s) 417, 534, 963
Bme18I GGWCC 1 cut(s) 1008
BmeRI GACNNNNNGTC 2 cut(s) 308, 1006
BmgT120I GGNCC 1 cut(s) 1008
BmiI GGNNCC 5 cut(s) 442, 497, 896, 1009, 1010
BmrFI CCNGG 3 cut(s) 417, 534, 963
BmrI ACTGGG 1 cut(s) 1006
BmsI GCATC 1 cut(s) 730
BmuI ACTGGG 1 cut(s) 1006
BpiI GAAGAC 1 cut(s) 1044
BplI GAGNNNNNCTC 2 cut(s) 922, 954
Bpu10I CCTNAGC 2 cut(s) 293, 929
Bpu1102I GCTNAGC 2 cut(s) 392, 755
Bpu14I TTCGAA 1 cut(s) 734
BpuMI CCSGG 2 cut(s) 417, 963
Bsa29I ATCGAT 1 cut(s) 503
BsaHI GRCGYC 1 cut(s) 359
BsaWI WCCGGW 1 cut(s) 1071
Bsc4I CCNNNNNNNGG 6 cut(s) 346, 416, 506, 533, 879, 993
Bse118I RCCGGY 1 cut(s) 1071
Bse1I ACTGG 2 cut(s) 873, 1012
Bse3DI GCAATG 2 cut(s) 126, 454
BseBI CCWGG 1 cut(s) 534
BseCI ATCGAT 1 cut(s) 503
BseGI GGATG 1 cut(s) 162
BseLI CCNNNNNNNGG 6 cut(s) 346, 416, 506, 533, 879, 993
BseMI GCAATG 2 cut(s) 126, 454
BseMII CTCAG 4 cut(s) 76, 307, 406, 920
BseNI ACTGG 2 cut(s) 873, 1012
BsePI GCGCGC 1 cut(s) 910
BseRI GAGGAG 3 cut(s) 296, 797, 830
BseXI GCAGC 3 cut(s) 284, 420, 920
BseYI CCCAGC 1 cut(s) 436
Bsh1236I CGCG 3 cut(s) 910, 912, 989
BshFI GGCC 1 cut(s) 961
BshNI GGYRCC 1 cut(s) 894
BshTI ACCGGT 1 cut(s) 1071
BshVI ATCGAT 1 cut(s) 503
BsiSI CCGG 3 cut(s) 416, 962, 1072
BslFI GGGAC 1 cut(s) 994
BslI CCNNNNNNNGG 6 cut(s) 346, 416, 506, 533, 879, 993
BsmAI GTCTC 2 cut(s) 314, 316
BsmBI CGTCTC 1 cut(s) 316
BsmFI GGGAC 1 cut(s) 994
BsmI GAATGC 3 cut(s) 223, 373, 837
BsnI GGCC 1 cut(s) 961
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 1 cut(s) 443
Bsp143I GATC 4 cut(s) 197, 241, 529, 1027
Bsp1720I GCTNAGC 2 cut(s) 392, 755
BspACI CCGC 8 cut(s) 125, 298, 420, 588, 694, 925, 987, 1054
BspANI GGCC 1 cut(s) 961
BspCNI CTCAG 4 cut(s) 75, 306, 405, 921
BspDI ATCGAT 1 cut(s) 503
BspFNI CGCG 3 cut(s) 910, 912, 989
BspLI GGNNCC 5 cut(s) 442, 497, 896, 1009, 1010
BspPI GGATC 3 cut(s) 192, 236, 524
BspT104I TTCGAA 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 894
BsrBI CCGCTC 1 cut(s) 696
BsrDI GCAATG 2 cut(s) 126, 454
BsrFI RCCGGY 1 cut(s) 1071
BsrI ACTGG 2 cut(s) 873, 1012
BssAI RCCGGY 1 cut(s) 1071
BssHII GCGCGC 1 cut(s) 910
BssMI GATC 4 cut(s) 197, 241, 529, 1027
BssNI GRCGYC 1 cut(s) 359
Bst2UI CCWGG 1 cut(s) 534
Bst6I CTCTTC 2 cut(s) 330, 774
BstACI GRCGYC 1 cut(s) 359
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 2 cut(s) 221, 912
BstDEI CTNAG 5 cut(s) 62, 293, 392, 755, 929
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 1 cut(s) 162
BstFNI CGCG 3 cut(s) 910, 912, 989
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 3 cut(s) 139, 912, 914
BstKTI GATC 4 cut(s) 200, 244, 532, 1030
BstMAI GTCTC 2 cut(s) 314, 316
BstMBI GATC 4 cut(s) 197, 241, 529, 1027
BstMWI GCNNNNNNNGC 3 cut(s) 80, 933, 1060
BstNI CCWGG 1 cut(s) 534
BstSCI CCNGG 3 cut(s) 415, 532, 961
BstSFI CTRYAG 1 cut(s) 760
BstUI CGCG 3 cut(s) 910, 912, 989
BstV1I GCAGC 3 cut(s) 284, 420, 920
BstV2I GAAGAC 1 cut(s) 1044
Bsu15I ATCGAT 1 cut(s) 503
BsuRI GGCC 1 cut(s) 961
BsuTUI ATCGAT 1 cut(s) 503
BtgZI GCGATG 1 cut(s) 64
BtsCI GGATG 1 cut(s) 162
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 1 cut(s) 836
Cac8I GCNNGC 2 cut(s) 221, 912
CfoI GCGC 3 cut(s) 139, 912, 914
Cfr10I RCCGGY 1 cut(s) 1071
Cfr13I GGNCC 1 cut(s) 1008
ClaI ATCGAT 1 cut(s) 503
CseI GACGC 1 cut(s) 348
Csp6I GTAC 4 cut(s) 4, 22, 978, 1069
CspAI ACCGGT 1 cut(s) 1071
CviAII CATG 2 cut(s) 788, 854
CviQI GTAC 4 cut(s) 4, 22, 978, 1069
DdeI CTNAG 5 cut(s) 62, 293, 392, 755, 929
DpnI GATC 4 cut(s) 199, 243, 531, 1029
DpnII GATC 4 cut(s) 197, 241, 529, 1027
DriI GACNNNNNGTC 2 cut(s) 308, 1006
EaeI YGGCCR 1 cut(s) 959
Eam1104I CTCTTC 2 cut(s) 330, 774
Eam1105I GACNNNNNGTC 2 cut(s) 308, 1006
EarI CTCTTC 2 cut(s) 330, 774
EciI GGCGGA 2 cut(s) 140, 914
Eco24I GRGCYC 1 cut(s) 443
Eco47I GGWCC 1 cut(s) 1008
Eco47III AGCGCT 1 cut(s) 138
Eco57I CTGAAG 1 cut(s) 165
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 1 cut(s) 1008
EcoRII CCWGG 1 cut(s) 532
EcoT22I ATGCAT 1 cut(s) 745
EcoT38I GRGCYC 1 cut(s) 443
Esp3I CGTCTC 1 cut(s) 316
FaeI CATG 2 cut(s) 791, 857
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FaqI GGGAC 1 cut(s) 994
FatI CATG 2 cut(s) 787, 853
FbaI TGATCA 1 cut(s) 1027
Fnu4HI GCNGC 6 cut(s) 273, 298, 434, 694, 934, 987
FokI GGATG 1 cut(s) 149
FriOI GRGCYC 1 cut(s) 443
Fsp4HI GCNGC 6 cut(s) 273, 298, 434, 694, 934, 987
GlaI GCGC 3 cut(s) 138, 911, 913
GluI GCNGC 6 cut(s) 273, 298, 434, 694, 934, 987
GsaI CCCAGC 1 cut(s) 440
HaeII RGCGCY 1 cut(s) 140
HaeIII GGCC 1 cut(s) 961
HapII CCGG 3 cut(s) 416, 962, 1072
HgaI GACGC 1 cut(s) 348
HhaI GCGC 3 cut(s) 139, 912, 914
Hin1I GRCGYC 1 cut(s) 359
Hin1II CATG 2 cut(s) 791, 857
Hin6I GCGC 3 cut(s) 137, 910, 912
HinP1I GCGC 3 cut(s) 137, 910, 912
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 5 cut(s) 303, 322, 335, 683, 708
HpaII CCGG 3 cut(s) 416, 962, 1072
HphI GGTGA 1 cut(s) 362
Hpy166II GTNNAC 1 cut(s) 160
Hpy188I TCNGA 5 cut(s) 65, 145, 197, 241, 700
Hpy188III TCNNGA 6 cut(s) 493, 514, 643, 657, 826, 947
Hpy8I GTNNAC 1 cut(s) 160
Hpy99I CGWCG 3 cut(s) 22, 364, 770
HpyAV CCTTC 2 cut(s) 97, 101
HpyCH4IV ACGT 1 cut(s) 20
HpyCH4V TGCA 5 cut(s) 119, 223, 447, 743, 811
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 933, 1060
HpyF3I CTNAG 5 cut(s) 62, 293, 392, 755, 929
HpySE526I ACGT 1 cut(s) 20
Hsp92I GRCGYC 1 cut(s) 359
Hsp92II CATG 2 cut(s) 791, 857
HspAI GCGC 3 cut(s) 137, 910, 912
KflI GGGWCCC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 1027
Kzo9I GATC 4 cut(s) 197, 241, 529, 1027
LmnI GCTCC 3 cut(s) 446, 701, 784
Lsp1109I GCAGC 3 cut(s) 284, 420, 920
LweI GCATC 1 cut(s) 730
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 1 cut(s) 623
MalI GATC 4 cut(s) 199, 243, 531, 1029
MbiI CCGCTC 1 cut(s) 696
MboI GATC 4 cut(s) 197, 241, 529, 1027
MboII GAAGA 5 cut(s) 98, 158, 317, 791, 1049
MhlI GDGCHC 1 cut(s) 443
MluCI AATT 5 cut(s) 31, 248, 521, 844, 952
MlyI GAGTC 3 cut(s) 297, 316, 702
MmeI TCCRAC 2 cut(s) 723, 974
Mph1103I ATGCAT 1 cut(s) 745
MroXI GAANNNNTTC 1 cut(s) 730
MseI TTAA 3 cut(s) 30, 191, 267
MslI CAYNNNNRTG 1 cut(s) 348
MspI CCGG 3 cut(s) 416, 962, 1072
MspR9I CCNGG 3 cut(s) 417, 534, 963
Mva1269I GAATGC 3 cut(s) 223, 373, 837
MvaI CCWGG 1 cut(s) 534
MvnI CGCG 3 cut(s) 910, 912, 989
MwoI GCNNNNNNNGC 3 cut(s) 80, 933, 1060
NciI CCSGG 2 cut(s) 417, 963
NdeII GATC 4 cut(s) 197, 241, 529, 1027
NlaIII CATG 2 cut(s) 791, 857
NlaIV GGNNCC 5 cut(s) 442, 497, 896, 1009, 1010
NmuCI GTSAC 1 cut(s) 623
NsiI ATGCAT 1 cut(s) 745
NspV TTCGAA 1 cut(s) 734
OliI CACNNNNGTG 1 cut(s) 348
PauI GCGCGC 1 cut(s) 910
PcsI WCGNNNNNNNCGW 2 cut(s) 315, 712
PctI GAATGC 3 cut(s) 223, 373, 837
PdmI GAANNNNTTC 1 cut(s) 730
PfeI GAWTC 2 cut(s) 335, 683
PflMI CCANNNNNTGG 1 cut(s) 506
PinAI ACCGGT 1 cut(s) 1071
PkrI GCNGC 6 cut(s) 274, 299, 435, 695, 935, 988
PleI GAGTC 3 cut(s) 297, 316, 702
PpsI GAGTC 3 cut(s) 297, 316, 702
PpuMI RGGWCCY 1 cut(s) 1008
Psp5II RGGWCCY 1 cut(s) 1008
Psp6I CCWGG 1 cut(s) 532
PspFI CCCAGC 1 cut(s) 436
PspGI CCWGG 1 cut(s) 532
PspN4I GGNNCC 5 cut(s) 442, 497, 896, 1009, 1010
PspPI GGNCC 1 cut(s) 1008
PspPPI RGGWCCY 1 cut(s) 1008
PteI GCGCGC 1 cut(s) 910
RsaI GTAC 4 cut(s) 5, 23, 979, 1070
RsaNI GTAC 4 cut(s) 4, 22, 978, 1069
RseI CAYNNNNRTG 1 cut(s) 348
SaqAI TTAA 3 cut(s) 30, 191, 267
SatI GCNGC 6 cut(s) 273, 298, 434, 694, 934, 987
Sau3AI GATC 4 cut(s) 197, 241, 529, 1027
Sau96I GGNCC 1 cut(s) 1008
SchI GAGTC 3 cut(s) 297, 316, 702
ScrFI CCNGG 3 cut(s) 417, 534, 963
SduI GDGCHC 1 cut(s) 443
SfaNI GCATC 1 cut(s) 730
SfcI CTRYAG 1 cut(s) 760
SfuI TTCGAA 1 cut(s) 734
SinI GGWCC 1 cut(s) 1008
SmiMI CAYNNNNRTG 1 cut(s) 348
Sse9I AATT 5 cut(s) 31, 248, 521, 844, 952
SsiI CCGC 8 cut(s) 125, 298, 420, 588, 694, 925, 987, 1054
StyD4I CCNGG 3 cut(s) 415, 532, 961
TaiI ACGT 1 cut(s) 23
TaqI TCGA 6 cut(s) 333, 503, 656, 706, 734, 849
TasI AATT 5 cut(s) 31, 248, 521, 844, 952
TatI WGTACW 2 cut(s) 3, 977
TauI GCSGC 3 cut(s) 300, 696, 989
TfiI GAWTC 2 cut(s) 335, 683
Tru1I TTAA 3 cut(s) 30, 191, 267
Tru9I TTAA 3 cut(s) 30, 191, 267
TscAI CASTG 1 cut(s) 843
TseFI GTSAC 1 cut(s) 623
TseI GCWGC 3 cut(s) 272, 433, 933
Tsp45I GTSAC 1 cut(s) 623
TspDTI ATGAA 2 cut(s) 737, 804
TspGWI ACGGA 2 cut(s) 196, 370
TspRI CASTG 1 cut(s) 843
Van91I CCANNNNNTGG 1 cut(s) 506
VpaK11BI GGWCC 1 cut(s) 1008
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 1 cut(s) 248
XcmI CCANNNNNNNNNTGG 1 cut(s) 954
XmnI GAANNNNTTC 1 cut(s) 730
Zsp2I ATGCAT 1 cut(s) 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.