F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RRM_1 | PF00076 | 367 - 436 | 6e-17 | RNA recognition motif |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| AccB1I | GGYRCC | 3 cut(s) | 553, 953, 1331 |
| AccI | GTMKAC | 1 cut(s) | 1114 |
| AccII | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| AccIII | TCCGGA | 1 cut(s) | 1708 |
| AciI | CCGC | 8 cut(s) | 65, 67, 84, 325, 400, 415, 540, 1625 |
| AclWI | GGATC | 3 cut(s) | 315, 342, 393 |
| AcoI | YGGCCR | 3 cut(s) | 3, 667, 1431 |
| AcsI | RAATTY | 3 cut(s) | 878, 1535, 1673 |
| AcuI | CTGAAG | 1 cut(s) | 1499 |
| AcyI | GRCGYC | 1 cut(s) | 554 |
| AfaI | GTAC | 4 cut(s) | 23, 743, 1137, 1654 |
| AflIII | ACRYGT | 1 cut(s) | 648 |
| AgsI | TTSAA | 1 cut(s) | 147 |
| AjiI | CACGTC | 1 cut(s) | 1568 |
| AjnI | CCWGG | 6 cut(s) | 610, 631, 835, 1063, 1594, 1725 |
| AluBI | AGCT | 3 cut(s) | 617, 1477, 1749 |
| AluI | AGCT | 3 cut(s) | 617, 1477, 1749 |
| Alw21I | GWGCWC | 2 cut(s) | 74, 682 |
| Alw26I | GTCTC | 7 cut(s) | 92, 192, 258, 294, 426, 967, 1290 |
| AlwI | GGATC | 3 cut(s) | 315, 342, 393 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1070 |
| Ama87I | CYCGRG | 1 cut(s) | 1154 |
| Aor13HI | TCCGGA | 1 cut(s) | 1708 |
| AoxI | GGCC | 8 cut(s) | 3, 601, 667, 832, 912, 1054, 1078, 1431 |
| ApeKI | GCWGC | 4 cut(s) | 584, 1001, 1271, 1381 |
| ApoI | RAATTY | 3 cut(s) | 878, 1535, 1673 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 761, 793 |
| AspLEI | GCGC | 3 cut(s) | 168, 456, 556 |
| AspS9I | GGNCC | 4 cut(s) | 833, 1013, 1088, 1166 |
| AsuC2I | CCSGG | 1 cut(s) | 733 |
| AsuHPI | GGTGA | 3 cut(s) | 314, 1584, 1742 |
| AvaI | CYCGRG | 1 cut(s) | 1154 |
| AvaII | GGWCC | 3 cut(s) | 1013, 1088, 1166 |
| BaeGI | GKGCMC | 1 cut(s) | 958 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 13, 46 |
| BalI | TGGCCA | 2 cut(s) | 669, 1433 |
| BanI | GGYRCC | 3 cut(s) | 553, 953, 1331 |
| BbsI | GAAGAC | 1 cut(s) | 1506 |
| Bbv12I | GWGCWC | 2 cut(s) | 74, 682 |
| BbvI | GCAGC | 4 cut(s) | 571, 988, 1283, 1393 |
| BccI | CCATC | 4 cut(s) | 929, 1000, 1574, 1628 |
| BceAI | ACGGC | 1 cut(s) | 64 |
| BciT130I | CCWGG | 6 cut(s) | 612, 633, 837, 1065, 1596, 1727 |
| BclI | TGATCA | 1 cut(s) | 313 |
| BcnI | CCSGG | 1 cut(s) | 733 |
| BcoDI | GTCTC | 7 cut(s) | 92, 192, 258, 294, 426, 967, 1290 |
| BfaI | CTAG | 5 cut(s) | 723, 978, 1187, 1743, 1750 |
| BfmI | CTRYAG | 1 cut(s) | 762 |
| BfoI | RGCGCY | 1 cut(s) | 557 |
| BglII | AGATCT | 3 cut(s) | 458, 899, 1243 |
| BisI | GCNGC | 5 cut(s) | 400, 585, 1002, 1272, 1382 |
| BlsI | GCNGC | 5 cut(s) | 401, 586, 1003, 1273, 1383 |
| Bme1390I | CCNGG | 7 cut(s) | 612, 633, 733, 837, 1065, 1596, 1727 |
| Bme18I | GGWCC | 3 cut(s) | 1013, 1088, 1166 |
| BmeT110I | CYCGRG | 1 cut(s) | 1154 |
| BmgBI | CACGTC | 1 cut(s) | 1568 |
| BmgT120I | GGNCC | 4 cut(s) | 833, 1013, 1088, 1166 |
| BmiI | GGNNCC | 8 cut(s) | 52, 555, 955, 1089, 1168, 1333, 1403, 1639 |
| BmrFI | CCNGG | 7 cut(s) | 612, 633, 733, 837, 1065, 1596, 1727 |
| BmrI | ACTGGG | 1 cut(s) | 1020 |
| BmsI | GCATC | 1 cut(s) | 832 |
| BmuI | ACTGGG | 1 cut(s) | 1020 |
| BpiI | GAAGAC | 1 cut(s) | 1506 |
| BpmI | CTGGAG | 2 cut(s) | 633, 1617 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1350 |
| BpuEI | CTTGAG | 2 cut(s) | 1103, 1511 |
| BpuMI | CCSGG | 1 cut(s) | 733 |
| BsaBI | GATNNNNATC | 3 cut(s) | 312, 318, 384 |
| BsaHI | GRCGYC | 1 cut(s) | 554 |
| BsaI | GGTCTC | 2 cut(s) | 92, 967 |
| BsaJI | CCNNGG | 8 cut(s) | 65, 79, 468, 632, 835, 1174, 1725, 1726 |
| BsaWI | WCCGGW | 1 cut(s) | 1708 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 831, 861, 964, 994, 1703, 1733 |
| Bse1I | ACTGG | 5 cut(s) | 670, 670, 686, 1026, 1688 |
| Bse3DI | GCAATG | 4 cut(s) | 711, 925, 930, 1391 |
| Bse8I | GATNNNNATC | 3 cut(s) | 312, 318, 384 |
| BseAI | TCCGGA | 1 cut(s) | 1708 |
| BseBI | CCWGG | 6 cut(s) | 612, 633, 837, 1065, 1596, 1727 |
| BseDI | CCNNGG | 8 cut(s) | 65, 79, 468, 632, 835, 1174, 1725, 1726 |
| BseGI | GGATG | 7 cut(s) | 373, 642, 940, 1477, 1489, 1633, 1665 |
| BseJI | GATNNNNATC | 3 cut(s) | 312, 318, 384 |
| BseMI | GCAATG | 4 cut(s) | 711, 925, 930, 1391 |
| BseMII | CTCAG | 3 cut(s) | 128, 471, 1341 |
| BseNI | ACTGG | 5 cut(s) | 670, 670, 686, 1026, 1688 |
| BseRI | GAGGAG | 1 cut(s) | 43 |
| BseSI | GKGCMC | 1 cut(s) | 958 |
| BseXI | GCAGC | 4 cut(s) | 571, 988, 1283, 1393 |
| BsgI | GTGCAG | 3 cut(s) | 552, 719, 1290 |
| Bsh1236I | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| Bsh1285I | CGRYCG | 1 cut(s) | 406 |
| BshFI | GGCC | 8 cut(s) | 5, 603, 669, 834, 914, 1056, 1080, 1433 |
| BshNI | GGYRCC | 3 cut(s) | 553, 953, 1331 |
| BsiEI | CGRYCG | 1 cut(s) | 406 |
| BsiHKAI | GWGCWC | 2 cut(s) | 74, 682 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1154 |
| BsiSI | CCGG | 2 cut(s) | 733, 1709 |
| BslFI | GGGAC | 5 cut(s) | 194, 230, 272, 308, 1101 |
| BsmAI | GTCTC | 7 cut(s) | 92, 192, 258, 294, 426, 967, 1290 |
| BsmFI | GGGAC | 5 cut(s) | 194, 230, 272, 308, 1101 |
| BsmI | GAATGC | 1 cut(s) | 118 |
| BsnI | GGCC | 8 cut(s) | 5, 603, 669, 834, 914, 1056, 1080, 1433 |
| Bso31I | GGTCTC | 2 cut(s) | 92, 967 |
| BsoBI | CYCGRG | 1 cut(s) | 1154 |
| Bsp1286I | GDGCHC | 3 cut(s) | 74, 682, 958 |
| Bsp13I | TCCGGA | 1 cut(s) | 1708 |
| Bsp19I | CCATGG | 2 cut(s) | 79, 468 |
| BspACI | CCGC | 8 cut(s) | 65, 67, 84, 325, 400, 415, 540, 1625 |
| BspANI | GGCC | 8 cut(s) | 5, 603, 669, 834, 914, 1056, 1080, 1433 |
| BspCNI | CTCAG | 3 cut(s) | 127, 472, 1342 |
| BspEI | TCCGGA | 1 cut(s) | 1708 |
| BspFNI | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| BspHI | TCATGA | 1 cut(s) | 310 |
| BspLI | GGNNCC | 8 cut(s) | 52, 555, 955, 1089, 1168, 1333, 1403, 1639 |
| BspPI | GGATC | 3 cut(s) | 315, 342, 393 |
| BspT107I | GGYRCC | 3 cut(s) | 553, 953, 1331 |
| BspTNI | GGTCTC | 2 cut(s) | 92, 967 |
| BsrDI | GCAATG | 4 cut(s) | 711, 925, 930, 1391 |
| BsrI | ACTGG | 5 cut(s) | 670, 670, 686, 1026, 1688 |
| BssECI | CCNNGG | 8 cut(s) | 65, 79, 468, 632, 835, 1174, 1725, 1726 |
| BssNI | GRCGYC | 1 cut(s) | 554 |
| BssT1I | CCWWGG | 2 cut(s) | 79, 468 |
| Bst2UI | CCWGG | 6 cut(s) | 612, 633, 837, 1065, 1596, 1727 |
| Bst4CI | ACNGT | 5 cut(s) | 29, 395, 407, 777, 1312 |
| Bst6I | CTCTTC | 1 cut(s) | 903 |
| BstACI | GRCGYC | 1 cut(s) | 554 |
| BstC8I | GCNNGC | 9 cut(s) | 702, 729, 810, 832, 916, 1022, 1320, 1374, 1422 |
| BstDEI | CTNAG | 3 cut(s) | 114, 480, 1350 |
| BstDSI | CCRYGG | 4 cut(s) | 65, 79, 468, 1174 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 597 |
| BstF5I | GGATG | 7 cut(s) | 373, 642, 940, 1477, 1489, 1633, 1665 |
| BstFNI | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| BstH2I | RGCGCY | 1 cut(s) | 557 |
| BstHHI | GCGC | 3 cut(s) | 168, 456, 556 |
| BstMAI | GTCTC | 7 cut(s) | 92, 192, 258, 294, 426, 967, 1290 |
| BstMCI | CGRYCG | 1 cut(s) | 406 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 560, 920, 1271, 1378, 1430 |
| BstNI | CCWGG | 6 cut(s) | 612, 633, 837, 1065, 1596, 1727 |
| BstNSI | RCATGY | 4 cut(s) | 652, 731, 812, 1376 |
| BstSCI | CCNGG | 7 cut(s) | 610, 631, 731, 835, 1063, 1594, 1725 |
| BstSFI | CTRYAG | 1 cut(s) | 762 |
| BstSLI | GKGCMC | 1 cut(s) | 958 |
| BstUI | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| BstV1I | GCAGC | 4 cut(s) | 571, 988, 1283, 1393 |
| BstV2I | GAAGAC | 1 cut(s) | 1506 |
| BstX2I | RGATCY | 3 cut(s) | 458, 899, 1243 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 611 |
| BstYI | RGATCY | 3 cut(s) | 458, 899, 1243 |
| BsuRI | GGCC | 8 cut(s) | 5, 603, 669, 834, 914, 1056, 1080, 1433 |
| BtgI | CCRYGG | 4 cut(s) | 65, 79, 468, 1174 |
| BtrI | CACGTC | 1 cut(s) | 1568 |
| BtsCI | GGATG | 7 cut(s) | 373, 642, 940, 1477, 1489, 1633, 1665 |
| BtsI | GCAGTG | 2 cut(s) | 825, 1704 |
| BtsIMutI | CAGTG | 3 cut(s) | 825, 1274, 1704 |
| Cac8I | GCNNGC | 9 cut(s) | 702, 729, 810, 832, 916, 1022, 1320, 1374, 1422 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1070 |
| CciI | TCATGA | 1 cut(s) | 310 |
| CfoI | GCGC | 3 cut(s) | 168, 456, 556 |
| Cfr13I | GGNCC | 4 cut(s) | 833, 1013, 1088, 1166 |
| Cfr42I | CCGCGG | 1 cut(s) | 68 |
| CseI | GACGC | 2 cut(s) | 50, 1543 |
| CsiI | ACCWGGT | 1 cut(s) | 1063 |
| Csp6I | GTAC | 4 cut(s) | 22, 742, 1136, 1653 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1423, 1458 |
| CviQI | GTAC | 4 cut(s) | 22, 742, 1136, 1653 |
| DdeI | CTNAG | 3 cut(s) | 114, 480, 1350 |
| DinI | GGCGCC | 1 cut(s) | 555 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| EaeI | YGGCCR | 3 cut(s) | 3, 667, 1431 |
| Eam1104I | CTCTTC | 1 cut(s) | 903 |
| EarI | CTCTTC | 1 cut(s) | 903 |
| EciI | GGCGGA | 1 cut(s) | 430 |
| Eco130I | CCWWGG | 2 cut(s) | 79, 468 |
| Eco31I | GGTCTC | 2 cut(s) | 92, 967 |
| Eco47I | GGWCC | 3 cut(s) | 1013, 1088, 1166 |
| Eco57I | CTGAAG | 1 cut(s) | 1499 |
| Eco88I | CYCGRG | 1 cut(s) | 1154 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 597 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1088 |
| EcoRII | CCWGG | 6 cut(s) | 610, 631, 835, 1063, 1594, 1725 |
| EcoT14I | CCWWGG | 2 cut(s) | 79, 468 |
| EcoT22I | ATGCAT | 1 cut(s) | 810 |
| EgeI | GGCGCC | 1 cut(s) | 555 |
| EheI | GGCGCC | 1 cut(s) | 555 |
| ErhI | CCWWGG | 2 cut(s) | 79, 468 |
| FaqI | GGGAC | 5 cut(s) | 194, 230, 272, 308, 1101 |
| FbaI | TGATCA | 1 cut(s) | 313 |
| FblI | GTMKAC | 1 cut(s) | 1114 |
| Fnu4HI | GCNGC | 5 cut(s) | 400, 585, 1002, 1272, 1382 |
| FokI | GGATG | 7 cut(s) | 380, 649, 947, 1484, 1496, 1640, 1672 |
| Fsp4HI | GCNGC | 5 cut(s) | 400, 585, 1002, 1272, 1382 |
| FspBI | CTAG | 5 cut(s) | 723, 978, 1187, 1743, 1750 |
| GlaI | GCGC | 3 cut(s) | 167, 455, 555 |
| GluI | GCNGC | 5 cut(s) | 400, 585, 1002, 1272, 1382 |
| GsuI | CTGGAG | 2 cut(s) | 633, 1617 |
| HaeII | RGCGCY | 1 cut(s) | 557 |
| HaeIII | GGCC | 8 cut(s) | 5, 603, 669, 834, 914, 1056, 1080, 1433 |
| HapII | CCGG | 2 cut(s) | 733, 1709 |
| HgaI | GACGC | 2 cut(s) | 50, 1543 |
| HhaI | GCGC | 3 cut(s) | 168, 456, 556 |
| Hin1I | GRCGYC | 1 cut(s) | 554 |
| Hin6I | GCGC | 3 cut(s) | 166, 454, 554 |
| HinP1I | GCGC | 3 cut(s) | 166, 454, 554 |
| HincII | GTYRAC | 1 cut(s) | 1586 |
| HindII | GTYRAC | 1 cut(s) | 1586 |
| HinfI | GANTC | 6 cut(s) | 104, 140, 607, 709, 1157, 1684 |
| HpaII | CCGG | 2 cut(s) | 733, 1709 |
| HphI | GGTGA | 3 cut(s) | 314, 1584, 1742 |
| Hpy166II | GTNNAC | 9 cut(s) | 509, 742, 859, 1115, 1237, 1544, 1571, 1586, 1722 |
| Hpy188I | TCNGA | 2 cut(s) | 481, 1038 |
| Hpy188III | TCNNGA | 7 cut(s) | 89, 191, 311, 338, 492, 1490, 1709 |
| Hpy8I | GTNNAC | 9 cut(s) | 509, 742, 859, 1115, 1237, 1544, 1571, 1586, 1722 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 95 |
| HpyAV | CCTTC | 4 cut(s) | 8, 12, 348, 1474 |
| HpyCH4III | ACNGT | 5 cut(s) | 29, 395, 407, 777, 1312 |
| HpyCH4IV | ACGT | 3 cut(s) | 517, 744, 1567 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 560, 920, 1271, 1378, 1430 |
| HpyF3I | CTNAG | 3 cut(s) | 114, 480, 1350 |
| HpySE526I | ACGT | 3 cut(s) | 517, 744, 1567 |
| Hsp92I | GRCGYC | 1 cut(s) | 554 |
| HspAI | GCGC | 3 cut(s) | 166, 454, 554 |
| KasI | GGCGCC | 1 cut(s) | 553 |
| Kpn2I | TCCGGA | 1 cut(s) | 1708 |
| Ksp22I | TGATCA | 1 cut(s) | 313 |
| KspI | CCGCGG | 1 cut(s) | 68 |
| LmnI | GCTCC | 4 cut(s) | 56, 69, 614, 677 |
| Lsp1109I | GCAGC | 4 cut(s) | 571, 988, 1283, 1393 |
| LweI | GCATC | 1 cut(s) | 832 |
| MabI | ACCWGGT | 1 cut(s) | 1063 |
| MaeI | CTAG | 5 cut(s) | 723, 978, 1187, 1743, 1750 |
| MaeII | ACGT | 3 cut(s) | 517, 744, 1567 |
| MaeIII | GTNAC | 6 cut(s) | 29, 595, 980, 1252, 1462, 1730 |
| MboII | GAAGA | 4 cut(s) | 135, 920, 1511, 1523 |
| MflI | RGATCY | 3 cut(s) | 458, 899, 1243 |
| MhlI | GDGCHC | 3 cut(s) | 74, 682, 958 |
| MlsI | TGGCCA | 2 cut(s) | 669, 1433 |
| MluCI | AATT | 5 cut(s) | 534, 878, 1386, 1535, 1673 |
| MluNI | TGGCCA | 2 cut(s) | 669, 1433 |
| Mly113I | GGCGCC | 1 cut(s) | 554 |
| MlyI | GAGTC | 2 cut(s) | 703, 1166 |
| MmeI | TCCRAC | 3 cut(s) | 647, 727, 1582 |
| Mox20I | TGGCCA | 2 cut(s) | 669, 1433 |
| Mph1103I | ATGCAT | 1 cut(s) | 810 |
| MroI | TCCGGA | 1 cut(s) | 1708 |
| MscI | TGGCCA | 2 cut(s) | 669, 1433 |
| MseI | TTAA | 3 cut(s) | 963, 1287, 1451 |
| MslI | CAYNNNNRTG | 1 cut(s) | 123 |
| Msp20I | TGGCCA | 2 cut(s) | 669, 1433 |
| MspA1I | CMGCKG | 1 cut(s) | 67 |
| MspI | CCGG | 2 cut(s) | 733, 1709 |
| MspR9I | CCNGG | 7 cut(s) | 612, 633, 733, 837, 1065, 1596, 1727 |
| Mva1269I | GAATGC | 1 cut(s) | 118 |
| MvaI | CCWGG | 6 cut(s) | 612, 633, 837, 1065, 1596, 1727 |
| MvnI | CGCG | 4 cut(s) | 67, 168, 402, 505 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 560, 920, 1271, 1378, 1430 |
| NarI | GGCGCC | 1 cut(s) | 554 |
| NciI | CCSGG | 1 cut(s) | 733 |
| NcoI | CCATGG | 2 cut(s) | 79, 468 |
| NlaIV | GGNNCC | 8 cut(s) | 52, 555, 955, 1089, 1168, 1333, 1403, 1639 |
| NmuCI | GTSAC | 3 cut(s) | 595, 980, 1730 |
| NsiI | ATGCAT | 1 cut(s) | 810 |
| NspI | RCATGY | 4 cut(s) | 652, 731, 812, 1376 |
| PaeI | GCATGC | 3 cut(s) | 731, 812, 1376 |
| PaeR7I | CTCGAG | 1 cut(s) | 1154 |
| PagI | TCATGA | 1 cut(s) | 310 |
| PasI | CCCWGGG | 1 cut(s) | 1726 |
| PciI | ACATGT | 1 cut(s) | 648 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 99 |
| PctI | GAATGC | 1 cut(s) | 118 |
| PfeI | GAWTC | 4 cut(s) | 104, 140, 607, 1684 |
| PfoI | TCCNGGA | 1 cut(s) | 610 |
| PkrI | GCNGC | 5 cut(s) | 401, 586, 1003, 1273, 1383 |
| PleI | GAGTC | 2 cut(s) | 703, 1165 |
| PluTI | GGCGCC | 1 cut(s) | 557 |
| PpsI | GAGTC | 2 cut(s) | 703, 1165 |
| PpuMI | RGGWCCY | 1 cut(s) | 1088 |
| PscI | ACATGT | 1 cut(s) | 648 |
| Psp5II | RGGWCCY | 1 cut(s) | 1088 |
| Psp6I | CCWGG | 6 cut(s) | 610, 631, 835, 1063, 1594, 1725 |
| PspGI | CCWGG | 6 cut(s) | 610, 631, 835, 1063, 1594, 1725 |
| PspN4I | GGNNCC | 8 cut(s) | 52, 555, 955, 1089, 1168, 1333, 1403, 1639 |
| PspPI | GGNCC | 4 cut(s) | 833, 1013, 1088, 1166 |
| PspPPI | RGGWCCY | 1 cut(s) | 1088 |
| PspXI | VCTCGAGB | 1 cut(s) | 1154 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1070 |
| PsuI | RGATCY | 3 cut(s) | 458, 899, 1243 |
| RsaI | GTAC | 4 cut(s) | 23, 743, 1137, 1654 |
| RsaNI | GTAC | 4 cut(s) | 22, 742, 1136, 1653 |
| RseI | CAYNNNNRTG | 1 cut(s) | 123 |
| SacII | CCGCGG | 1 cut(s) | 68 |
| SaqAI | TTAA | 3 cut(s) | 963, 1287, 1451 |
| SatI | GCNGC | 5 cut(s) | 400, 585, 1002, 1272, 1382 |
| Sau96I | GGNCC | 4 cut(s) | 833, 1013, 1088, 1166 |
| SchI | GAGTC | 2 cut(s) | 703, 1166 |
| ScrFI | CCNGG | 7 cut(s) | 612, 633, 733, 837, 1065, 1596, 1727 |
| SduI | GDGCHC | 3 cut(s) | 74, 682, 958 |
| SexAI | ACCWGGT | 1 cut(s) | 1063 |
| SfaNI | GCATC | 1 cut(s) | 832 |
| SfcI | CTRYAG | 1 cut(s) | 762 |
| SfoI | GGCGCC | 1 cut(s) | 555 |
| Sfr274I | CTCGAG | 1 cut(s) | 1154 |
| Sfr303I | CCGCGG | 1 cut(s) | 68 |
| SgrBI | CCGCGG | 1 cut(s) | 68 |
| SinI | GGWCC | 3 cut(s) | 1013, 1088, 1166 |
| SlaI | CTCGAG | 1 cut(s) | 1154 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 123 |
| SmlI | CTYRAG | 3 cut(s) | 1082, 1154, 1490 |
| SmoI | CTYRAG | 3 cut(s) | 1082, 1154, 1490 |
| SphI | GCATGC | 3 cut(s) | 731, 812, 1376 |
| Sse9I | AATT | 5 cut(s) | 534, 878, 1386, 1535, 1673 |
| SsiI | CCGC | 8 cut(s) | 65, 67, 84, 325, 400, 415, 540, 1625 |
| SspDI | GGCGCC | 1 cut(s) | 553 |
| SspMI | CTAG | 5 cut(s) | 723, 978, 1187, 1743, 1750 |
| StyD4I | CCNGG | 7 cut(s) | 610, 631, 731, 835, 1063, 1594, 1725 |
| StyI | CCWWGG | 2 cut(s) | 79, 468 |
| TaaI | ACNGT | 5 cut(s) | 29, 395, 407, 777, 1312 |
| TaiI | ACGT | 3 cut(s) | 520, 747, 1570 |
| TaqI | TCGA | 3 cut(s) | 90, 948, 1155 |
| TasI | AATT | 5 cut(s) | 534, 878, 1386, 1535, 1673 |
| TatI | WGTACW | 1 cut(s) | 1135 |
| TauI | GCSGC | 1 cut(s) | 402 |
| TfiI | GAWTC | 4 cut(s) | 104, 140, 607, 1684 |
| Tru1I | TTAA | 3 cut(s) | 963, 1287, 1451 |
| Tru9I | TTAA | 3 cut(s) | 963, 1287, 1451 |
| TscAI | CASTG | 3 cut(s) | 832, 1281, 1704 |
| TseFI | GTSAC | 3 cut(s) | 595, 980, 1730 |
| TseI | GCWGC | 4 cut(s) | 584, 1001, 1271, 1381 |
| Tsp45I | GTSAC | 3 cut(s) | 595, 980, 1730 |
| TspDTI | ATGAA | 5 cut(s) | 786, 885, 1512, 1532, 1676 |
| TspGWI | ACGGA | 2 cut(s) | 48, 1163 |
| TspRI | CASTG | 3 cut(s) | 832, 1281, 1704 |
| VpaK11BI | GGWCC | 3 cut(s) | 1013, 1088, 1166 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 597 |
| XapI | RAATTY | 3 cut(s) | 878, 1535, 1673 |
| XceI | RCATGY | 4 cut(s) | 652, 731, 812, 1376 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 922 |
| XhoI | CTCGAG | 1 cut(s) | 1154 |
| XmiI | GTMKAC | 1 cut(s) | 1114 |
| XspI | CTAG | 5 cut(s) | 723, 978, 1187, 1743, 1750 |
| Zsp2I | ATGCAT | 1 cut(s) | 810 |