Peptidase, trypsin-like serine and cysteine proteases
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_1 | PF07734 | 16 - 162 | 6e-11 | F-box associated beta propeller domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 402 |
| AciI | CCGC | 1 cut(s) | 375 |
| AcoI | YGGCCR | 1 cut(s) | 181 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 541 |
| AflIII | ACRYGT | 1 cut(s) | 438 |
| AgsI | TTSAA | 1 cut(s) | 217 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 294, 557 |
| AjiI | CACGTC | 2 cut(s) | 109, 439 |
| AjnI | CCWGG | 2 cut(s) | 16, 178 |
| AluBI | AGCT | 3 cut(s) | 152, 339, 460 |
| AluI | AGCT | 3 cut(s) | 152, 339, 460 |
| Alw21I | GWGCWC | 1 cut(s) | 154 |
| AoxI | GGCC | 1 cut(s) | 181 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 137 |
| AspS9I | GGNCC | 2 cut(s) | 116, 322 |
| AsuC2I | CCSGG | 1 cut(s) | 483 |
| AsuII | TTCGAA | 1 cut(s) | 270 |
| AvaII | GGWCC | 2 cut(s) | 116, 322 |
| BalI | TGGCCA | 1 cut(s) | 183 |
| BanII | GRGCYC | 1 cut(s) | 154 |
| BauI | CACGAG | 2 cut(s) | 123, 448 |
| Bbv12I | GWGCWC | 1 cut(s) | 154 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BceAI | ACGGC | 1 cut(s) | 519 |
| BciT130I | CCWGG | 2 cut(s) | 18, 180 |
| BclI | TGATCA | 1 cut(s) | 304 |
| BcnI | CCSGG | 1 cut(s) | 483 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 3 cut(s) | 18, 180, 483 |
| Bme18I | GGWCC | 2 cut(s) | 116, 322 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 294, 557 |
| BmgBI | CACGTC | 2 cut(s) | 109, 439 |
| BmgT120I | GGNCC | 2 cut(s) | 116, 322 |
| BmiI | GGNNCC | 1 cut(s) | 324 |
| BmrFI | CCNGG | 3 cut(s) | 18, 180, 483 |
| Bpu10I | CCTNAGC | 2 cut(s) | 12, 41 |
| Bpu14I | TTCGAA | 1 cut(s) | 270 |
| BpuEI | CTTGAG | 1 cut(s) | 166 |
| BpuMI | CCSGG | 1 cut(s) | 483 |
| BsaJI | CCNNGG | 1 cut(s) | 178 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 541 |
| BseBI | CCWGG | 2 cut(s) | 18, 180 |
| BseDI | CCNNGG | 1 cut(s) | 178 |
| BseGI | GGATG | 1 cut(s) | 365 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 541 |
| BseMII | CTCAG | 2 cut(s) | 55, 345 |
| BseRI | GAGGAG | 1 cut(s) | 293 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| BshFI | GGCC | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 1 cut(s) | 154 |
| BsiSI | CCGG | 1 cut(s) | 483 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 541 |
| BsnI | GGCC | 1 cut(s) | 183 |
| Bsp119I | TTCGAA | 1 cut(s) | 270 |
| Bsp1286I | GDGCHC | 1 cut(s) | 154 |
| Bsp143I | GATC | 2 cut(s) | 304, 525 |
| BspACI | CCGC | 1 cut(s) | 375 |
| BspANI | GGCC | 1 cut(s) | 183 |
| BspCNI | CTCAG | 2 cut(s) | 54, 346 |
| BspHI | TCATGA | 2 cut(s) | 310, 423 |
| BspLI | GGNNCC | 1 cut(s) | 324 |
| BspT104I | TTCGAA | 1 cut(s) | 270 |
| BssECI | CCNNGG | 1 cut(s) | 178 |
| BssMI | GATC | 2 cut(s) | 304, 525 |
| BssSI | CACGAG | 2 cut(s) | 123, 448 |
| Bst2BI | CACGAG | 2 cut(s) | 123, 448 |
| Bst2UI | CCWGG | 2 cut(s) | 18, 180 |
| Bst4CI | ACNGT | 1 cut(s) | 292 |
| BstBI | TTCGAA | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 1 cut(s) | 58 |
| BstDEI | CTNAG | 4 cut(s) | 12, 41, 354, 456 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 15 |
| BstF5I | GGATG | 1 cut(s) | 365 |
| BstKTI | GATC | 2 cut(s) | 307, 528 |
| BstMBI | GATC | 2 cut(s) | 304, 525 |
| BstNI | CCWGG | 2 cut(s) | 18, 180 |
| BstSCI | CCNGG | 3 cut(s) | 16, 178, 481 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 179 |
| BsuRI | GGCC | 1 cut(s) | 183 |
| BtrI | CACGTC | 2 cut(s) | 109, 439 |
| BtsCI | GGATG | 1 cut(s) | 365 |
| BtsIMutI | CAGTG | 1 cut(s) | 246 |
| Cac8I | GCNNGC | 1 cut(s) | 58 |
| CciI | TCATGA | 2 cut(s) | 310, 423 |
| Cfr13I | GGNCC | 2 cut(s) | 116, 322 |
| CviAII | CATG | 3 cut(s) | 185, 311, 424 |
| CviJI | RGCY | 9 cut(s) | 16, 40, 60, 98, 152, 183, 194, 339, 460 |
| CviKI_1 | RGCY | 9 cut(s) | 16, 40, 60, 98, 152, 183, 194, 339, 460 |
| DdeI | CTNAG | 4 cut(s) | 12, 41, 354, 456 |
| DpnI | GATC | 2 cut(s) | 306, 527 |
| DpnII | GATC | 2 cut(s) | 304, 525 |
| DriI | GACNNNNNGTC | 2 cut(s) | 294, 557 |
| EaeI | YGGCCR | 1 cut(s) | 181 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 294, 557 |
| Ecl136II | GAGCTC | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 1 cut(s) | 154 |
| Eco47I | GGWCC | 2 cut(s) | 116, 322 |
| Eco53kI | GAGCTC | 1 cut(s) | 152 |
| EcoICRI | GAGCTC | 1 cut(s) | 152 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 322 |
| EcoRII | CCWGG | 2 cut(s) | 16, 178 |
| EcoT38I | GRGCYC | 1 cut(s) | 154 |
| FaeI | CATG | 3 cut(s) | 188, 314, 427 |
| FatI | CATG | 3 cut(s) | 184, 310, 423 |
| FbaI | TGATCA | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 1 cut(s) | 372 |
| FriOI | GRGCYC | 1 cut(s) | 154 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 183 |
| HapII | CCGG | 1 cut(s) | 483 |
| Hin1II | CATG | 3 cut(s) | 188, 314, 427 |
| HinfI | GANTC | 2 cut(s) | 208, 446 |
| HpaII | CCGG | 1 cut(s) | 483 |
| Hpy166II | GTNNAC | 1 cut(s) | 453 |
| Hpy188I | TCNGA | 4 cut(s) | 28, 199, 355, 384 |
| Hpy188III | TCNNGA | 4 cut(s) | 286, 311, 320, 424 |
| Hpy8I | GTNNAC | 1 cut(s) | 453 |
| Hpy99I | CGWCG | 2 cut(s) | 80, 555 |
| HpyCH4III | ACNGT | 1 cut(s) | 292 |
| HpyCH4IV | ACGT | 3 cut(s) | 108, 156, 438 |
| HpyF3I | CTNAG | 4 cut(s) | 12, 41, 354, 456 |
| HpySE526I | ACGT | 3 cut(s) | 108, 156, 438 |
| Hsp92II | CATG | 3 cut(s) | 188, 314, 427 |
| Ksp22I | TGATCA | 1 cut(s) | 304 |
| Kzo9I | GATC | 2 cut(s) | 304, 525 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| MaeII | ACGT | 3 cut(s) | 108, 156, 438 |
| MaeIII | GTNAC | 1 cut(s) | 443 |
| MalI | GATC | 2 cut(s) | 306, 527 |
| MboI | GATC | 2 cut(s) | 304, 525 |
| MboII | GAAGA | 1 cut(s) | 145 |
| MhlI | GDGCHC | 1 cut(s) | 154 |
| MlsI | TGGCCA | 1 cut(s) | 183 |
| MluCI | AATT | 2 cut(s) | 228, 507 |
| MluNI | TGGCCA | 1 cut(s) | 183 |
| MlyI | GAGTC | 2 cut(s) | 217, 440 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| MnlI | CCTC | 8 cut(s) | 109, 196, 205, 217, 271, 349, 378, 489 |
| Mox20I | TGGCCA | 1 cut(s) | 183 |
| MroXI | GAANNNNTTC | 1 cut(s) | 137 |
| MscI | TGGCCA | 1 cut(s) | 183 |
| MseI | TTAA | 3 cut(s) | 465, 506, 568 |
| Msp20I | TGGCCA | 1 cut(s) | 183 |
| MspI | CCGG | 1 cut(s) | 483 |
| MspR9I | CCNGG | 3 cut(s) | 18, 180, 483 |
| MvaI | CCWGG | 2 cut(s) | 18, 180 |
| NciI | CCSGG | 1 cut(s) | 483 |
| NdeII | GATC | 2 cut(s) | 304, 525 |
| NlaIII | CATG | 3 cut(s) | 188, 314, 427 |
| NlaIV | GGNNCC | 1 cut(s) | 324 |
| NmuCI | GTSAC | 1 cut(s) | 443 |
| NspV | TTCGAA | 1 cut(s) | 270 |
| PagI | TCATGA | 2 cut(s) | 310, 423 |
| PdmI | GAANNNNTTC | 1 cut(s) | 137 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PleI | GAGTC | 2 cut(s) | 216, 440 |
| PpsI | GAGTC | 2 cut(s) | 216, 440 |
| PpuMI | RGGWCCY | 1 cut(s) | 322 |
| PsiI | TTATAA | 1 cut(s) | 402 |
| Psp124BI | GAGCTC | 1 cut(s) | 154 |
| Psp5II | RGGWCCY | 1 cut(s) | 322 |
| Psp6I | CCWGG | 2 cut(s) | 16, 178 |
| PspGI | CCWGG | 2 cut(s) | 16, 178 |
| PspN4I | GGNNCC | 1 cut(s) | 324 |
| PspPI | GGNCC | 2 cut(s) | 116, 322 |
| PspPPI | RGGWCCY | 1 cut(s) | 322 |
| SacI | GAGCTC | 1 cut(s) | 154 |
| SaqAI | TTAA | 3 cut(s) | 465, 506, 568 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 2 cut(s) | 304, 525 |
| Sau96I | GGNCC | 2 cut(s) | 116, 322 |
| SchI | GAGTC | 2 cut(s) | 217, 440 |
| ScrFI | CCNGG | 3 cut(s) | 18, 180, 483 |
| SduI | GDGCHC | 1 cut(s) | 154 |
| SetI | ASST | 8 cut(s) | 22, 47, 111, 154, 159, 341, 441, 462 |
| SfuI | TTCGAA | 1 cut(s) | 270 |
| SinI | GGWCC | 2 cut(s) | 116, 322 |
| SmlI | CTYRAG | 1 cut(s) | 145 |
| SmoI | CTYRAG | 1 cut(s) | 145 |
| Sse9I | AATT | 2 cut(s) | 228, 507 |
| SsiI | CCGC | 1 cut(s) | 375 |
| SstI | GAGCTC | 1 cut(s) | 154 |
| StyD4I | CCNGG | 3 cut(s) | 16, 178, 481 |
| TaaI | ACNGT | 1 cut(s) | 292 |
| TaiI | ACGT | 3 cut(s) | 111, 159, 441 |
| TaqI | TCGA | 2 cut(s) | 270, 411 |
| TaqII | GACCGA | 1 cut(s) | 133 |
| TasI | AATT | 2 cut(s) | 228, 507 |
| Tru1I | TTAA | 3 cut(s) | 465, 506, 568 |
| Tru9I | TTAA | 3 cut(s) | 465, 506, 568 |
| TscAI | CASTG | 1 cut(s) | 246 |
| TseFI | GTSAC | 1 cut(s) | 443 |
| TseI | GCWGC | 1 cut(s) | 95 |
| Tsp45I | GTSAC | 1 cut(s) | 443 |
| TspDTI | ATGAA | 3 cut(s) | 146, 221, 264 |
| TspGWI | ACGGA | 1 cut(s) | 45 |
| TspRI | CASTG | 1 cut(s) | 246 |
| VpaK11BI | GGWCC | 2 cut(s) | 116, 322 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 15 |
| XmnI | GAANNNNTTC | 1 cut(s) | 137 |