Rmu_sc0006889.1_g000030

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006889.1
OG0000082
Physical Location & Seq
Reverse (-)
133590 .. 134770
1181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006889.1_g000030.1.cds

Sequence Viewer

Length: 1074 bp
atggcaacaatgaacgaacacctccccgaagaaatcacaacacaaatcctttataggttacccctgaaacaagtaatccgtttcagctgcacttcaaagagatggaggtcaattgtctcagacccccaattcgccaaatcgcatttcaaattcgcttctgagcggagaaccctcagtcacagactcctgctctccacgccctctcatatggaatccttagacttgcaaacaccgtcctttgtggacgactcttgtatcagaaagctcatctgcccattcaagcaaccagggcgccccgtcttcacactcggttcctgcaatggtatggtgtttgtatctcttgatttccatgatggattttatatctggaacccatcaactgggttgttcctcaaattgcccaacccgggttttgcctcggaagaaaataaaacggtttcatgtctccaccattgtggttttgggtatgtttcggcccctggcgattacaaagttgttgtagctgctccatctgaggtgaatccagccatgcctatacaagtgttctcgtctaaatccacctcttggaaaaggtttgaatcccctccccacttctccttgatgcgttggttcgatacaattaggggcagtcttactaatgaggcactacattggctcgacgaattgcgtgagccggagctagacacttccagatacaccatcactgcttttgatttagacaaagaagaatttcgggaaatgccgcttcctatttcggttgagacactttcagatagatcgtttgtaagagggtttaagaatgcggggattcatcttgtgctacctgtcttccacacggaaagaagggttgttatgtggggatgcagattttgggatggggaggtggacgacctcttgataaggtttgatcataacgaagaagagaagcttgacagggttgcggtttgtagtgcgacatattggcttggtcgaaacgggtatggtccatataggtttgagccaggtcactgtcatatgatccaatatgatgaaagtctactttggcttcatgattctagggctgaggggaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

357

Amino Acids

41.26

Weight (kDa)

6.31

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 291
AccB7I CCANNNNNTGG 2 cut(s) 380, 564
AccBSI CCGCTC 1 cut(s) 163
AccI GTMKAC 1 cut(s) 1036
AciI CCGC 4 cut(s) 163, 743, 803, 941
AclWI GGATC 1 cut(s) 1012
AcsI RAATTY 2 cut(s) 149, 728
AcyI GRCGYC 1 cut(s) 292
AfiI CCNNNNNNNGG 3 cut(s) 380, 407, 564
AgsI TTSAA 4 cut(s) 96, 148, 280, 578
AjnI CCWGG 3 cut(s) 286, 478, 1000
AjuI GAANNNNNNNTTGG 2 cut(s) 128, 160
AleI CACNNNNGTG 1 cut(s) 453
AluBI AGCT 5 cut(s) 87, 265, 503, 679, 928
AluI AGCT 5 cut(s) 87, 265, 503, 679, 928
Alw26I GTCTC 3 cut(s) 121, 449, 755
AlwI GGATC 1 cut(s) 1012
Ama87I CYCGRG 1 cut(s) 406
AoxI GGCC 1 cut(s) 474
ApeKI GCWGC 2 cut(s) 87, 503
ApoI RAATTY 2 cut(s) 149, 728
ArsI GACNNNNNNTTYG 2 cut(s) 113, 145
Asp700I GAANNNNTTC 1 cut(s) 729
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 2 cut(s) 475, 983
AsuC2I CCSGG 2 cut(s) 407, 408
AsuHPI GGTGA 1 cut(s) 529
AvaI CYCGRG 1 cut(s) 406
AvaII GGWCC 1 cut(s) 983
BaeI ACNNNNGTAYC 2 cut(s) 238, 271
BanI GGYRCC 1 cut(s) 291
BbsI GAAGAC 2 cut(s) 292, 820
BbvCI CCTCAGC 1 cut(s) 1062
BbvI GCAGC 2 cut(s) 74, 490
BccI CCATC 6 cut(s) 96, 347, 382, 517, 707, 869
BciT130I CCWGG 3 cut(s) 288, 480, 1002
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 2 cut(s) 407, 408
BcoDI GTCTC 3 cut(s) 121, 449, 755
BfaI CTAG 2 cut(s) 680, 1056
BfoI RGCGCY 1 cut(s) 295
BisI GCNGC 3 cut(s) 88, 504, 743
BlsI GCNGC 3 cut(s) 89, 505, 744
Bme1390I CCNGG 5 cut(s) 288, 407, 408, 480, 1002
Bme18I GGWCC 1 cut(s) 983
BmeT110I CYCGRG 1 cut(s) 406
BmgT120I GGNCC 2 cut(s) 475, 983
BmiI GGNNCC 4 cut(s) 293, 313, 371, 477
BmrFI CCNGG 5 cut(s) 288, 407, 408, 480, 1002
BmrI ACTGGG 1 cut(s) 390
BmsI GCATC 2 cut(s) 591, 851
BmuI ACTGGG 1 cut(s) 390
BpiI GAAGAC 2 cut(s) 292, 820
Bpu10I CCTNAGC 1 cut(s) 1062
BpuMI CCSGG 2 cut(s) 407, 408
BsaHI GRCGYC 1 cut(s) 292
BsaJI CCNNGG 4 cut(s) 287, 406, 417, 478
Bsc4I CCNNNNNNNGG 3 cut(s) 380, 407, 564
Bse1I ACTGG 1 cut(s) 385
Bse3DI GCAATG 1 cut(s) 325
BseBI CCWGG 3 cut(s) 288, 480, 1002
BseDI CCNNGG 4 cut(s) 287, 406, 417, 478
BseGI GGATG 2 cut(s) 866, 880
BseLI CCNNNNNNNGG 3 cut(s) 380, 407, 564
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 5 cut(s) 132, 150, 187, 504, 1053
BseNI ACTGG 1 cut(s) 385
BseXI GCAGC 2 cut(s) 74, 490
BsgI GTGCAG 1 cut(s) 73
BshFI GGCC 1 cut(s) 476
BshNI GGYRCC 1 cut(s) 291
BsiHKCI CYCGRG 1 cut(s) 406
BsiSI CCGG 2 cut(s) 407, 674
BslI CCNNNNNNNGG 3 cut(s) 380, 407, 564
BsmAI GTCTC 3 cut(s) 121, 449, 755
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 1 cut(s) 476
BsoBI CYCGRG 1 cut(s) 406
Bsp143I GATC 3 cut(s) 776, 907, 1017
BspACI CCGC 4 cut(s) 163, 743, 803, 941
BspANI GGCC 1 cut(s) 476
BspCNI CTCAG 5 cut(s) 131, 151, 186, 505, 1054
BspHI TCATGA 1 cut(s) 1048
BspLI GGNNCC 4 cut(s) 293, 313, 371, 477
BspPI GGATC 1 cut(s) 1012
BspT107I GGYRCC 1 cut(s) 291
BsrBI CCGCTC 1 cut(s) 163
BsrDI GCAATG 1 cut(s) 325
BsrI ACTGG 1 cut(s) 385
BssECI CCNNGG 4 cut(s) 287, 406, 417, 478
BssMI GATC 3 cut(s) 776, 907, 1017
BssNI GRCGYC 1 cut(s) 292
Bst2UI CCWGG 3 cut(s) 288, 480, 1002
Bst4CI ACNGT 3 cut(s) 234, 436, 1010
Bst6I CTCTTC 1 cut(s) 915
BstACI GRCGYC 1 cut(s) 292
BstDEI CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1062
BstEII GGTNACC 1 cut(s) 57
BstF5I GGATG 2 cut(s) 866, 880
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 3 cut(s) 779, 910, 1020
BstMAI GTCTC 3 cut(s) 121, 449, 755
BstMBI GATC 3 cut(s) 776, 907, 1017
BstMWI GCNNNNNNNGC 2 cut(s) 196, 289
BstNI CCWGG 3 cut(s) 288, 480, 1002
BstPI GGTNACC 1 cut(s) 57
BstSCI CCNGG 5 cut(s) 286, 405, 406, 478, 1000
BstV1I GCAGC 2 cut(s) 74, 490
BstV2I GAAGAC 2 cut(s) 292, 820
BstXI CCANNNNNNTGG 1 cut(s) 455
BsuRI GGCC 1 cut(s) 476
BtsCI GGATG 2 cut(s) 866, 880
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 2 cut(s) 702, 1006
CciI TCATGA 1 cut(s) 1048
CfoI GCGC 1 cut(s) 294
Cfr13I GGNCC 2 cut(s) 475, 983
Cfr9I CCCGGG 1 cut(s) 406
CviAII CATG 4 cut(s) 350, 441, 529, 1049
DdeI CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1062
DinI GGCGCC 1 cut(s) 293
DpnI GATC 3 cut(s) 778, 909, 1019
DpnII GATC 3 cut(s) 776, 907, 1017
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
Eco47I GGWCC 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 406
Eco91I GGTNACC 1 cut(s) 57
EcoO65I GGTNACC 1 cut(s) 57
EcoRII CCWGG 3 cut(s) 286, 478, 1000
EgeI GGCGCC 1 cut(s) 293
EheI GGCGCC 1 cut(s) 293
FaeI CATG 4 cut(s) 353, 444, 532, 1052
FalI AAGNNNNNCTT 2 cut(s) 912, 944
FatI CATG 4 cut(s) 349, 440, 528, 1048
FauI CCCGC 1 cut(s) 796
FauNDI CATATG 2 cut(s) 207, 1014
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 1 cut(s) 1036
Fnu4HI GCNGC 3 cut(s) 88, 504, 743
FokI GGATG 2 cut(s) 873, 887
Fsp4HI GCNGC 3 cut(s) 88, 504, 743
FspBI CTAG 2 cut(s) 680, 1056
GlaI GCGC 1 cut(s) 293
GluI GCNGC 3 cut(s) 88, 504, 743
HaeII RGCGCY 1 cut(s) 295
HaeIII GGCC 1 cut(s) 476
HapII CCGG 2 cut(s) 407, 674
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 1 cut(s) 292
Hin1II CATG 4 cut(s) 353, 444, 532, 1052
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HindIII AAGCTT 1 cut(s) 926
HinfI GANTC 7 cut(s) 183, 212, 248, 520, 578, 808, 1052
HpaII CCGG 2 cut(s) 407, 674
HphI GGTGA 1 cut(s) 529
Hpy166II GTNNAC 3 cut(s) 244, 886, 1037
Hpy188I TCNGA 6 cut(s) 121, 160, 260, 421, 514, 772
Hpy188III TCNNGA 6 cut(s) 341, 367, 690, 734, 895, 1049
Hpy8I GTNNAC 3 cut(s) 244, 886, 1037
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 1 cut(s) 837
HpyCH4III ACNGT 3 cut(s) 234, 436, 1010
HpyCH4V TGCA 4 cut(s) 90, 226, 318, 864
HpyF10VI GCNNNNNNNGC 2 cut(s) 196, 289
HpyF3I CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1062
Hsp92I GRCGYC 1 cut(s) 292
Hsp92II CATG 4 cut(s) 353, 444, 532, 1052
HspAI GCGC 1 cut(s) 292
KasI GGCGCC 1 cut(s) 291
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 3 cut(s) 776, 907, 1017
LmnI GCTCC 2 cut(s) 511, 676
Lsp1109I GCAGC 2 cut(s) 74, 490
LweI GCATC 2 cut(s) 591, 851
MaeI CTAG 2 cut(s) 680, 1056
MaeIII GTNAC 3 cut(s) 57, 176, 1004
MalI GATC 3 cut(s) 778, 909, 1019
MbiI CCGCTC 1 cut(s) 163
MboI GATC 3 cut(s) 776, 907, 1017
MboII GAAGA 7 cut(s) 41, 292, 434, 737, 820, 929, 932
MfeI CAATTG 1 cut(s) 111
MluCI AATT 7 cut(s) 111, 128, 149, 395, 618, 662, 728
Mly113I GGCGCC 1 cut(s) 292
MlyI GAGTC 2 cut(s) 177, 242
MroXI GAANNNNTTC 1 cut(s) 729
MseI TTAA 1 cut(s) 795
MslI CAYNNNNRTG 1 cut(s) 453
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 2 cut(s) 407, 674
MspR9I CCNGG 5 cut(s) 288, 407, 408, 480, 1002
MunI CAATTG 1 cut(s) 111
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 3 cut(s) 288, 480, 1002
MwoI GCNNNNNNNGC 2 cut(s) 196, 289
NarI GGCGCC 1 cut(s) 292
NciI CCSGG 2 cut(s) 407, 408
NdeI CATATG 2 cut(s) 207, 1014
NdeII GATC 3 cut(s) 776, 907, 1017
NlaIII CATG 4 cut(s) 353, 444, 532, 1052
NlaIV GGNNCC 4 cut(s) 293, 313, 371, 477
NmuCI GTSAC 2 cut(s) 176, 1004
OliI CACNNNNGTG 1 cut(s) 453
PagI TCATGA 1 cut(s) 1048
PctI GAATGC 1 cut(s) 805
PdmI GAANNNNTTC 1 cut(s) 729
PfeI GAWTC 5 cut(s) 212, 520, 578, 808, 1052
PflMI CCANNNNNTGG 2 cut(s) 380, 564
PkrI GCNGC 3 cut(s) 89, 505, 744
PleI GAGTC 2 cut(s) 177, 242
PluTI GGCGCC 1 cut(s) 295
PpsI GAGTC 2 cut(s) 177, 242
Psp6I CCWGG 3 cut(s) 286, 478, 1000
PspEI GGTNACC 1 cut(s) 57
PspGI CCWGG 3 cut(s) 286, 478, 1000
PspN4I GGNNCC 4 cut(s) 293, 313, 371, 477
PspPI GGNCC 2 cut(s) 475, 983
PvuII CAGCTG 1 cut(s) 87
RseI CAYNNNNRTG 1 cut(s) 453
SaqAI TTAA 1 cut(s) 795
SatI GCNGC 3 cut(s) 88, 504, 743
Sau3AI GATC 3 cut(s) 776, 907, 1017
Sau96I GGNCC 2 cut(s) 475, 983
SchI GAGTC 2 cut(s) 177, 242
ScrFI CCNGG 5 cut(s) 288, 407, 408, 480, 1002
SfaNI GCATC 2 cut(s) 591, 851
SfoI GGCGCC 1 cut(s) 293
SinI GGWCC 1 cut(s) 983
SmaI CCCGGG 1 cut(s) 408
SmiMI CAYNNNNRTG 1 cut(s) 453
Sse9I AATT 7 cut(s) 111, 128, 149, 395, 618, 662, 728
SsiI CCGC 4 cut(s) 163, 743, 803, 941
SspDI GGCGCC 1 cut(s) 291
SspMI CTAG 2 cut(s) 680, 1056
StyD4I CCNGG 5 cut(s) 286, 405, 406, 478, 1000
TaaI ACNGT 3 cut(s) 234, 436, 1010
TaqI TCGA 3 cut(s) 612, 657, 970
TasI AATT 7 cut(s) 111, 128, 149, 395, 618, 662, 728
TauI GCSGC 1 cut(s) 745
TfiI GAWTC 5 cut(s) 212, 520, 578, 808, 1052
Tru1I TTAA 1 cut(s) 795
Tru9I TTAA 1 cut(s) 795
TscAI CASTG 2 cut(s) 709, 1013
TseFI GTSAC 2 cut(s) 176, 1004
TseI GCWGC 2 cut(s) 87, 503
Tsp45I GTSAC 2 cut(s) 176, 1004
TspDTI ATGAA 5 cut(s) 26, 429, 800, 1037, 1044
TspGWI ACGGA 2 cut(s) 68, 851
TspMI CCCGGG 1 cut(s) 406
TspRI CASTG 2 cut(s) 709, 1013
Van91I CCANNNNNTGG 2 cut(s) 380, 564
VpaK11BI GGWCC 1 cut(s) 983
XapI RAATTY 2 cut(s) 149, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 458
XmaI CCCGGG 1 cut(s) 406
XmiI GTMKAC 1 cut(s) 1036
XmnI GAANNNNTTC 1 cut(s) 729
XspI CTAG 2 cut(s) 680, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.