Rmu_sc0002983.1_g000038

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002983.1
OG0000082
Physical Location & Seq
Reverse (-)
190660 .. 195030
4371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002983.1_g000038.1.cds

Sequence Viewer

Length: 1536 bp
atgtcatttcggttcggttttcggtttaggctcggaaccgaaccgatcggaaccaaacccacccctaccagagaaagctctactgacagaaagctcagctgcccattcaagcagccgggctataatctccactcactcttctcctgcaatgccactggcgactacagagttctcataggcaacttctgctcattgaacaataaccaccacatcttctcatcgaacactaacatttggaaaagtatcaaatcccctttacctgtccaaagagacgatcagtggattctttcaaatgaggcacttcattcggttgagaaggagatacttgctttcgatttaacacatgataagtttcaaacaatgccgctgcctgacccggaaccgggtcagtatatcagagagctaggggactttagaggctgcctgtgtgcatttgattataagaatcaacgtattggctttattgatttgtgggtcatgaaagaatataacgtgggtgagtcctggactaggttctttaccttaaagatttttgatctgcagcctatgcttgtactctatttaaggccgatcatggttatggaaactagtacaattctggagatagagctttctaatgatcgtaggcttattgatactgagttcaagttgataaagagttgtcataaggaagagaagtttgaaacacataagattagcaggaagatgtatgccaaaatgattggatatgaagagagtctactttggcttggagtccataacaacaggaactggcctatggaactagccaagaaggctaggaatgcttcagaagctgagaataatggtgaacaaggcggaatgaatgtcaatgtggataaccaagggtcaaatcctgtcaacgtgtgtgttcaaaaccatggtagcagctctgttcatgttcaacagcaaacaaaacaaatgactgcaaaggagcagccacatcagccagtcacccactgccatgtcagcaccgggacccacgaccacatcatcaccggaccccactgccacgtcatcaccggacctcactgccacatcatcaccggaccccactgccacgtcagctccggtggctttttcctaccagatttttctggcaagatttttcctgccaaatttccggcgactttttccagccaaattttccagcgtcctatttcgaggatgagtaacctgaacaaattagacttttctctattgggaacaactgtctcaggatatcacagttgggttcgtgatgtccgccagcatctcaaggctgatggaatcctggatactattctcgagcctagccaagacgtgctaactgttgagcaagctcaaactttggaagcaaatagagcagccttagaggaaaataaggtgaaagccatcatcctaatgactcgtcatatggatgattcgctcaagtacgagtgtatgaatgaagaagactctagaaagctgtgggtctcactcgaagaaagatttgacaacgtccgtgactccctacttcctgacctagaagtgagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

511

Amino Acids

58.58

Weight (kDa)

6.56

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 441
AccI GTMKAC 1 cut(s) 739
AciI CCGC 3 cut(s) 365, 837, 1264
AcsI RAATTY 2 cut(s) 1136, 1161
AcuI CTGAAG 1 cut(s) 792
AfaI GTAC 3 cut(s) 555, 592, 1433
AfiI CCNNNNNNNGG 3 cut(s) 382, 383, 510
AflIII ACRYGT 1 cut(s) 882
AgsI TTSAA 8 cut(s) 109, 196, 291, 356, 646, 683, 893, 923
AhlI ACTAGT 1 cut(s) 587
AjiI CACGTC 3 cut(s) 1033, 1081, 1321
AjnI CCWGG 2 cut(s) 503, 1290
Alw26I GTCTC 3 cut(s) 264, 1237, 1477
AlwNI CAGNNNCTG 2 cut(s) 771, 815
Ama87I CYCGRG 1 cut(s) 1304
AoxI GGCC 2 cut(s) 566, 773
ApeKI GCWGC 8 cut(s) 99, 112, 367, 420, 541, 906, 955, 1364
ApoI RAATTY 2 cut(s) 1136, 1161
AspS9I GGNCC 4 cut(s) 996, 1019, 1043, 1067
AsuC2I CCSGG 4 cut(s) 117, 377, 384, 994
AsuHPI GGTGA 7 cut(s) 509, 839, 964, 1006, 1030, 1054, 1396
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 4 cut(s) 996, 1019, 1043, 1067
BarI GAAGNNNNNNTAC 2 cut(s) 723, 755
BbsI GAAGAC 1 cut(s) 1458
BbvI GCAGC 8 cut(s) 86, 124, 354, 407, 553, 918, 967, 1376
BccI CCATC 2 cut(s) 1277, 1400
BcgI CGANNNNNNTGC 2 cut(s) 288, 322
BciT130I CCWGG 2 cut(s) 505, 1292
BciVI GTATCC 1 cut(s) 1288
BcnI CCSGG 4 cut(s) 117, 377, 384, 994
BcoDI GTCTC 3 cut(s) 264, 1237, 1477
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 8 cut(s) 404, 510, 588, 785, 798, 1311, 1458, 1523
BfmI CTRYAG 2 cut(s) 163, 539
BfuI GTATCC 1 cut(s) 1288
BglI GCCNNNNNGGC 1 cut(s) 794
BisI GCNGC 9 cut(s) 100, 113, 365, 368, 421, 542, 907, 956, 1365
BlpI GCTNAGC 1 cut(s) 95
BlsI GCNGC 9 cut(s) 101, 114, 366, 369, 422, 543, 908, 957, 1366
Bme1390I CCNGG 6 cut(s) 117, 377, 384, 505, 994, 1292
Bme18I GGWCC 4 cut(s) 996, 1019, 1043, 1067
BmeT110I CYCGRG 1 cut(s) 1304
BmgBI CACGTC 3 cut(s) 1033, 1081, 1321
BmgT120I GGNCC 4 cut(s) 996, 1019, 1043, 1067
BmiI GGNNCC 7 cut(s) 37, 52, 381, 997, 998, 1021, 1069
BmrFI CCNGG 6 cut(s) 117, 377, 384, 505, 994, 1292
BmsI GCATC 1 cut(s) 1279
BpiI GAAGAC 1 cut(s) 1458
BpmI CTGGAG 1 cut(s) 620
Bpu1102I GCTNAGC 1 cut(s) 95
BpuEI CTTGAG 2 cut(s) 1259, 1412
BpuMI CCSGG 4 cut(s) 117, 377, 384, 994
BsaI GGTCTC 1 cut(s) 1477
BsaJI CCNNGG 2 cut(s) 862, 898
BsaWI WCCGGW 4 cut(s) 1016, 1040, 1064, 1088
BsaXI ACNNNNNCTCC 2 cut(s) 1070, 1100
Bsc4I CCNNNNNNNGG 3 cut(s) 382, 383, 510
Bse1I ACTGG 3 cut(s) 160, 776, 968
Bse3DI GCAATG 1 cut(s) 154
BseBI CCWGG 2 cut(s) 505, 1292
BseDI CCNNGG 2 cut(s) 862, 898
BseGI GGATG 3 cut(s) 1191, 1395, 1423
BseLI CCNNNNNNNGG 3 cut(s) 382, 383, 510
BseMI GCAATG 1 cut(s) 154
BseMII CTCAG 4 cut(s) 109, 630, 807, 1248
BseNI ACTGG 3 cut(s) 160, 776, 968
BseXI GCAGC 8 cut(s) 86, 124, 354, 407, 553, 918, 967, 1376
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 2 cut(s) 568, 775
BsiEI CGRYCG 1 cut(s) 48
BsiHKCI CYCGRG 1 cut(s) 1304
BsiSI CCGG 9 cut(s) 116, 377, 383, 993, 1017, 1041, 1065, 1089, 1142
BslFI GGGAC 2 cut(s) 422, 1009
BslI CCNNNNNNNGG 3 cut(s) 382, 383, 510
BsmAI GTCTC 3 cut(s) 264, 1237, 1477
BsmBI CGTCTC 1 cut(s) 264
BsmFI GGGAC 2 cut(s) 422, 1009
BsmI GAATGC 1 cut(s) 808
BsnI GGCC 2 cut(s) 568, 775
Bso31I GGTCTC 1 cut(s) 1477
BsoBI CYCGRG 1 cut(s) 1304
Bsp143I GATC 5 cut(s) 45, 274, 535, 570, 619
Bsp1720I GCTNAGC 1 cut(s) 95
Bsp19I CCATGG 1 cut(s) 898
BspACI CCGC 3 cut(s) 365, 837, 1264
BspANI GGCC 2 cut(s) 568, 775
BspCNI CTCAG 4 cut(s) 108, 631, 808, 1247
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 7 cut(s) 37, 52, 381, 997, 998, 1021, 1069
BspMAI CTGCAG 1 cut(s) 543
BspTNI GGTCTC 1 cut(s) 1477
BsrDI GCAATG 1 cut(s) 154
BsrI ACTGG 3 cut(s) 160, 776, 968
BssECI CCNNGG 2 cut(s) 862, 898
BssMI GATC 5 cut(s) 45, 274, 535, 570, 619
BssT1I CCWWGG 2 cut(s) 862, 898
Bst2UI CCWGG 2 cut(s) 505, 1292
Bst4CI ACNGT 3 cut(s) 1231, 1247, 1330
Bst6I CTCTTC 3 cut(s) 143, 666, 726
BstAPI GCANNNNNTGC 2 cut(s) 186, 547
BstC8I GCNNGC 2 cut(s) 1268, 1338
BstDEI CTNAG 5 cut(s) 95, 639, 816, 1234, 1369
BstDSI CCRYGG 1 cut(s) 898
BstENI CCTNNNNNAGG 1 cut(s) 508
BstF5I GGATG 3 cut(s) 1191, 1395, 1423
BstKTI GATC 5 cut(s) 48, 277, 538, 573, 622
BstMAI GTCTC 3 cut(s) 264, 1237, 1477
BstMBI GATC 5 cut(s) 45, 274, 535, 570, 619
BstMCI CGRYCG 1 cut(s) 48
BstNI CCWGG 2 cut(s) 505, 1292
BstSCI CCNGG 6 cut(s) 115, 375, 382, 503, 992, 1290
BstSFI CTRYAG 2 cut(s) 163, 539
BstV1I GCAGC 8 cut(s) 86, 124, 354, 407, 553, 918, 967, 1376
BstV2I GAAGAC 1 cut(s) 1458
BsuI GTATCC 1 cut(s) 1288
BsuRI GGCC 2 cut(s) 568, 775
BtgI CCRYGG 1 cut(s) 898
BtrI CACGTC 3 cut(s) 1033, 1081, 1321
BtsCI GGATG 3 cut(s) 1191, 1395, 1423
BtsI GCAGTG 4 cut(s) 976, 1024, 1048, 1072
BtsIMutI CAGTG 6 cut(s) 153, 284, 976, 1024, 1048, 1072
Cac8I GCNNGC 2 cut(s) 1268, 1338
CaiI CAGNNNCTG 2 cut(s) 771, 815
CciI TCATGA 1 cut(s) 477
Cfr13I GGNCC 4 cut(s) 996, 1019, 1043, 1067
CseI GACGC 1 cut(s) 1160
Csp6I GTAC 3 cut(s) 554, 591, 1432
CviAII CATG 6 cut(s) 344, 478, 574, 899, 917, 983
CviQI GTAC 3 cut(s) 554, 591, 1432
DdeI CTNAG 5 cut(s) 95, 639, 816, 1234, 1369
DpnI GATC 5 cut(s) 47, 276, 537, 572, 621
DpnII GATC 5 cut(s) 45, 274, 535, 570, 619
Eam1104I CTCTTC 3 cut(s) 143, 666, 726
EarI CTCTTC 3 cut(s) 143, 666, 726
EciI GGCGGA 2 cut(s) 852, 1253
Eco130I CCWWGG 2 cut(s) 862, 898
Eco31I GGTCTC 1 cut(s) 1477
Eco32I GATATC 1 cut(s) 1241
Eco47I GGWCC 4 cut(s) 996, 1019, 1043, 1067
Eco57I CTGAAG 1 cut(s) 792
Eco88I CYCGRG 1 cut(s) 1304
EcoNI CCTNNNNNAGG 1 cut(s) 508
EcoO109I RGGNCCY 1 cut(s) 996
EcoRII CCWGG 2 cut(s) 503, 1290
EcoRV GATATC 1 cut(s) 1241
EcoT14I CCWWGG 2 cut(s) 862, 898
ErhI CCWWGG 2 cut(s) 862, 898
Esp3I CGTCTC 1 cut(s) 264
FaeI CATG 6 cut(s) 347, 481, 577, 902, 920, 986
FaqI GGGAC 2 cut(s) 422, 1009
FatI CATG 6 cut(s) 343, 477, 573, 898, 916, 982
FauNDI CATATG 1 cut(s) 1413
FblI GTMKAC 1 cut(s) 739
Fnu4HI GCNGC 9 cut(s) 100, 113, 365, 368, 421, 542, 907, 956, 1365
FokI GGATG 3 cut(s) 1198, 1382, 1430
Fsp4HI GCNGC 9 cut(s) 100, 113, 365, 368, 421, 542, 907, 956, 1365
FspBI CTAG 8 cut(s) 404, 510, 588, 785, 798, 1311, 1458, 1523
GluI GCNGC 9 cut(s) 100, 113, 365, 368, 421, 542, 907, 956, 1365
GsuI CTGGAG 1 cut(s) 620
HaeIII GGCC 2 cut(s) 568, 775
HapII CCGG 9 cut(s) 116, 377, 383, 993, 1017, 1041, 1065, 1089, 1142
HgaI GACGC 1 cut(s) 1160
Hin1II CATG 6 cut(s) 347, 481, 577, 902, 920, 986
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HpaII CCGG 9 cut(s) 116, 377, 383, 993, 1017, 1041, 1065, 1089, 1142
HphI GGTGA 7 cut(s) 509, 839, 964, 1006, 1030, 1054, 1396
Hpy166II GTNNAC 3 cut(s) 740, 830, 880
Hpy188I TCNGA 4 cut(s) 35, 50, 398, 811
Hpy188III TCNNGA 7 cut(s) 478, 599, 1236, 1256, 1304, 1458, 1517
Hpy8I GTNNAC 3 cut(s) 740, 830, 880
HpyAV CCTTC 2 cut(s) 310, 787
HpyCH4III ACNGT 3 cut(s) 1231, 1247, 1330
HpyCH4IV ACGT 7 cut(s) 451, 492, 882, 1032, 1080, 1320, 1497
HpyCH4V TGCA 4 cut(s) 147, 431, 541, 947
HpyF3I CTNAG 5 cut(s) 95, 639, 816, 1234, 1369
HpySE526I ACGT 7 cut(s) 451, 492, 882, 1032, 1080, 1320, 1497
Hsp92II CATG 6 cut(s) 347, 481, 577, 902, 920, 986
KflI GGGWCCC 1 cut(s) 996
Kzo9I GATC 5 cut(s) 45, 274, 535, 570, 619
LmnI GCTCC 2 cut(s) 952, 1091
Lsp1109I GCAGC 8 cut(s) 86, 124, 354, 407, 553, 918, 967, 1376
LweI GCATC 1 cut(s) 1279
MaeI CTAG 8 cut(s) 404, 510, 588, 785, 798, 1311, 1458, 1523
MaeII ACGT 7 cut(s) 451, 492, 882, 1032, 1080, 1320, 1497
MaeIII GTNAC 3 cut(s) 970, 1190, 1502
MalI GATC 5 cut(s) 47, 276, 537, 572, 621
MboI GATC 5 cut(s) 45, 274, 535, 570, 619
MboII GAAGA 8 cut(s) 130, 205, 683, 715, 743, 1460, 1463, 1493
MluCI AATT 4 cut(s) 594, 1136, 1161, 1202
MlyI GAGTC 6 cut(s) 509, 745, 762, 1399, 1448, 1499
MnlI CCTC 5 cut(s) 289, 410, 1056, 1176, 1366
MseI TTAA 3 cut(s) 338, 524, 563
MslI CAYNNNNRTG 4 cut(s) 578, 981, 1400, 1416
MspA1I CMGCKG 2 cut(s) 99, 367
MspI CCGG 9 cut(s) 116, 377, 383, 993, 1017, 1041, 1065, 1089, 1142
MspR9I CCNGG 6 cut(s) 117, 377, 384, 505, 994, 1292
Mva1269I GAATGC 1 cut(s) 808
MvaI CCWGG 2 cut(s) 505, 1292
NciI CCSGG 4 cut(s) 117, 377, 384, 994
NcoI CCATGG 1 cut(s) 898
NdeI CATATG 1 cut(s) 1413
NdeII GATC 5 cut(s) 45, 274, 535, 570, 619
NlaIII CATG 6 cut(s) 347, 481, 577, 902, 920, 986
NlaIV GGNNCC 7 cut(s) 37, 52, 381, 997, 998, 1021, 1069
NmuCI GTSAC 2 cut(s) 970, 1502
PaeR7I CTCGAG 1 cut(s) 1304
PagI TCATGA 1 cut(s) 477
PctI GAATGC 1 cut(s) 808
PfeI GAWTC 4 cut(s) 283, 445, 1287, 1421
PflFI GACNNNGTC 1 cut(s) 1496
PfoI TCCNGGA 2 cut(s) 503, 1290
PkrI GCNGC 9 cut(s) 101, 114, 366, 369, 422, 543, 908, 957, 1366
Ple19I CGATCG 1 cut(s) 48
PleI GAGTC 6 cut(s) 508, 744, 761, 1399, 1448, 1499
PpsI GAGTC 6 cut(s) 508, 744, 761, 1399, 1448, 1499
PpuMI RGGWCCY 1 cut(s) 996
PsiI TTATAA 1 cut(s) 441
Psp5II RGGWCCY 1 cut(s) 996
Psp6I CCWGG 2 cut(s) 503, 1290
PspGI CCWGG 2 cut(s) 503, 1290
PspN4I GGNNCC 7 cut(s) 37, 52, 381, 997, 998, 1021, 1069
PspPI GGNCC 4 cut(s) 996, 1019, 1043, 1067
PspPPI RGGWCCY 1 cut(s) 996
PstI CTGCAG 1 cut(s) 543
PstNI CAGNNNCTG 2 cut(s) 771, 815
PsyI GACNNNGTC 1 cut(s) 1496
PvuI CGATCG 1 cut(s) 48
PvuII CAGCTG 1 cut(s) 99
RsaI GTAC 3 cut(s) 555, 592, 1433
RsaNI GTAC 3 cut(s) 554, 591, 1432
RseI CAYNNNNRTG 4 cut(s) 578, 981, 1400, 1416
SaqAI TTAA 3 cut(s) 338, 524, 563
SatI GCNGC 9 cut(s) 100, 113, 365, 368, 421, 542, 907, 956, 1365
Sau3AI GATC 5 cut(s) 45, 274, 535, 570, 619
Sau96I GGNCC 4 cut(s) 996, 1019, 1043, 1067
SchI GAGTC 6 cut(s) 509, 745, 762, 1399, 1448, 1499
ScrFI CCNGG 6 cut(s) 117, 377, 384, 505, 994, 1292
SfaNI GCATC 1 cut(s) 1279
SfcI CTRYAG 2 cut(s) 163, 539
Sfr274I CTCGAG 1 cut(s) 1304
SinI GGWCC 4 cut(s) 996, 1019, 1043, 1067
SlaI CTCGAG 1 cut(s) 1304
SmiMI CAYNNNNRTG 4 cut(s) 578, 981, 1400, 1416
SmlI CTYRAG 3 cut(s) 1274, 1304, 1427
SmoI CTYRAG 3 cut(s) 1274, 1304, 1427
SpeI ACTAGT 1 cut(s) 587
Sse9I AATT 4 cut(s) 594, 1136, 1161, 1202
SsiI CCGC 3 cut(s) 365, 837, 1264
SspMI CTAG 8 cut(s) 404, 510, 588, 785, 798, 1311, 1458, 1523
StyD4I CCNGG 6 cut(s) 115, 375, 382, 503, 992, 1290
StyI CCWWGG 2 cut(s) 862, 898
TaaI ACNGT 3 cut(s) 1231, 1247, 1330
TaiI ACGT 7 cut(s) 454, 495, 885, 1035, 1083, 1323, 1500
TaqI TCGA 5 cut(s) 221, 333, 1181, 1305, 1479
TasI AATT 4 cut(s) 594, 1136, 1161, 1202
TatI WGTACW 2 cut(s) 553, 590
TauI GCSGC 1 cut(s) 367
TfiI GAWTC 4 cut(s) 283, 445, 1287, 1421
Tru1I TTAA 3 cut(s) 338, 524, 563
Tru9I TTAA 3 cut(s) 338, 524, 563
TscAI CASTG 6 cut(s) 160, 284, 983, 1031, 1055, 1079
TseFI GTSAC 2 cut(s) 970, 1502
TseI GCWGC 8 cut(s) 99, 112, 367, 420, 541, 906, 955, 1364
Tsp45I GTSAC 2 cut(s) 970, 1502
TspDTI ATGAA 7 cut(s) 293, 494, 744, 857, 905, 1457, 1461
TspGWI ACGGA 1 cut(s) 1490
TspRI CASTG 6 cut(s) 160, 284, 983, 1031, 1055, 1079
Tth111I GACNNNGTC 1 cut(s) 1496
VpaK11BI GGWCC 4 cut(s) 996, 1019, 1043, 1067
XagI CCTNNNNNAGG 1 cut(s) 508
XapI RAATTY 2 cut(s) 1136, 1161
XbaI TCTAGA 1 cut(s) 1457
XhoI CTCGAG 1 cut(s) 1304
XmiI GTMKAC 1 cut(s) 739
XspI CTAG 8 cut(s) 404, 510, 588, 785, 798, 1311, 1458, 1523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.