Rmu_sc0001862.1_g000003

Soluble inorganic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001862.1
OG0000082
Physical Location & Seq
Forward (+)
8254 .. 18681
10428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001862.1_g000003.1.cds

Sequence Viewer

Length: 1527 bp
atggcggattacttacctgaagacgtgatagttcgaatcctgaagaggttgcagatcaaacccctaatccgcttcacctgcgtttcgaaacgctggcgttccatcatactggccgacccagaattcgccaagacccaattccaaatagcctctcaacaccaaaccctccgtcacaggctcctcatctccaccgcctgtgaatctgaattcaactcactagacttggatgcgccgtcgccgttgggatacaattcttcggttaggtgcccattcacgcaaccggggggccgtcatgtcatactactgtgctcctgcaatggtttgatactcgcaactcttcataaagaagaacacatgtatatctggaacccatcaactcaattcttcaaaaaattacctgacccagctgatcgtccctcaaaaactcgtctagtcggctgtggttttggctatttgtcggccactgacgactacaaagtcgttgctgacttcagagtcagttctgttgatgaggtgaagggcaaggagatgcacatcttctcatcaaaagccaacatttggaaaaggactgaagcccctctcttcgactacgagtttgaatatgaggggactctttcaaatgaggcactccattggctggatgaacttggcatctttgcttttgatctagcaaaggaggagttccaaacaatgccgctgcctattcaggatgaaatccagctgagaattcagaggtgcttcagtttttgcattatcggtaatctgtgcaaggtgttgaatatggccaacagtggtggagaagggagtggaaagaattcaggatcctcatatcaaaatgttgccctgaatgaaaggatcctctcatctatgtcgcggagatctgttgctgctcacccctggcatgacttggagatcggccctgtcaaggtcttatatgtgctgaatgaaaggatcctctcatctatgtcgcggagatctgttgctgctcacccctggcatgacttggagatcggacctggtgcaccagcagttttcaactgtgttgttgaaattagcaaaggcagcaaggtcaagtatgagctcgacaaaacaagtggcctcataaaagttgatcgtgttctttactcatcggttgtttatccacacaactatggtttcatcccgcgaacaatttgtgaggatagtgatcctatggatgtcctggtactgatgcaggagcccgtgttacctggttcttttgtacgtgctcgtgctcttggattgatgcccatgattgatcaaggtgaaaaggatgacaaaattattgcagtatgtgctgatgaccctgagttccgtcattacaatgacatcaaggaccttcctccacatcgccttgcagaaatccgtcgattctttgaggattacaaaaagaatgagaacaaggaagttgaagttgaagactttcttcccgctgaggctgccattgatgccatcaaatactccatggacctgtatgcatcttacattgtggaaagcttgaggcagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004427 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Pyrophosphatase

Protein Analysis

508

Amino Acids

57.7

Weight (kDa)

5.84

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 86
AasI GACNNNNNNGTC 2 cut(s) 476, 494
Acc36I ACCTGC 1 cut(s) 86
AccB1I GGYRCC 1 cut(s) 264
AccB7I CCANNNNNTGG 2 cut(s) 558, 637
AccII CGCG 3 cut(s) 874, 970, 1165
AciI CCGC 8 cut(s) 5, 70, 192, 695, 874, 970, 1163, 1449
AclWI GGATC 7 cut(s) 816, 829, 850, 863, 946, 959, 1181
AcoI YGGCCR 3 cut(s) 111, 459, 783
AcsI RAATTY 4 cut(s) 122, 206, 726, 814
AcuI CTGAAG 5 cut(s) 39, 62, 475, 591, 724
AfaI GTAC 2 cut(s) 1206, 1242
AfiI CCNNNNNNNGG 3 cut(s) 558, 637, 925
AflIII ACRYGT 1 cut(s) 354
AgsI TTSAA 9 cut(s) 211, 388, 599, 618, 778, 1036, 1049, 1430, 1436
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 5 cut(s) 896, 992, 1015, 1200, 1228
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 4 cut(s) 407, 721, 1081, 1515
AluI AGCT 4 cut(s) 407, 721, 1081, 1515
Alw21I GWGCWC 5 cut(s) 311, 1024, 1083, 1249, 1255
Alw44I GTGCAC 1 cut(s) 1020
AlwI GGATC 7 cut(s) 816, 829, 850, 863, 946, 959, 1181
AoxI GGCC 6 cut(s) 111, 286, 459, 783, 916, 1096
ApaLI GTGCAC 1 cut(s) 1020
ApeKI GCWGC 5 cut(s) 697, 887, 983, 1062, 1457
ApoI RAATTY 4 cut(s) 122, 206, 726, 814
ArsI GACNNNNNNTTYG 6 cut(s) 107, 139, 154, 186, 578, 610
Asp700I GAANNNNTTC 2 cut(s) 814, 1440
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 5 cut(s) 286, 917, 1013, 1354, 1486
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 5 cut(s) 67, 526, 884, 980, 1295
AsuII TTCGAA 2 cut(s) 34, 86
AvaII GGWCC 3 cut(s) 1013, 1354, 1486
BaeGI GKGCMC 2 cut(s) 269, 1024
BalI TGGCCA 1 cut(s) 785
BamHI GGATCC 3 cut(s) 821, 855, 951
BanI GGYRCC 1 cut(s) 264
BanII GRGCYC 2 cut(s) 1083, 1221
BauI CACGAG 1 cut(s) 1248
BbsI GAAGAC 2 cut(s) 27, 1443
Bbv12I GWGCWC 5 cut(s) 311, 1024, 1083, 1249, 1255
BbvCI CCTCAGC 1 cut(s) 1452
BbvI GCAGC 5 cut(s) 684, 874, 970, 1074, 1444
BccI CCATC 3 cut(s) 110, 379, 1478
BceAI ACGGC 3 cut(s) 217, 223, 273
BciT130I CCWGG 5 cut(s) 898, 994, 1017, 1202, 1230
BciVI GTATCC 1 cut(s) 239
BclI TGATCA 1 cut(s) 1276
BcnI CCSGG 1 cut(s) 282
BfaI CTAG 3 cut(s) 218, 431, 668
BfuAI ACCTGC 1 cut(s) 86
BfuI GTATCC 1 cut(s) 239
BglII AGATCT 2 cut(s) 878, 974
BisI GCNGC 6 cut(s) 695, 698, 888, 984, 1063, 1458
BlsI GCNGC 6 cut(s) 696, 699, 889, 985, 1064, 1459
Bme1390I CCNGG 6 cut(s) 282, 898, 994, 1017, 1202, 1230
Bme18I GGWCC 3 cut(s) 1013, 1354, 1486
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 5 cut(s) 286, 917, 1013, 1354, 1486
BmiI GGNNCC 8 cut(s) 179, 266, 287, 368, 823, 857, 953, 1218
BmrFI CCNGG 6 cut(s) 282, 898, 994, 1017, 1202, 1230
BmsI GCATC 7 cut(s) 217, 519, 660, 1200, 1254, 1456, 1505
BpiI GAAGAC 2 cut(s) 27, 1443
Bpu10I CCTNAGC 1 cut(s) 1452
Bpu14I TTCGAA 2 cut(s) 34, 86
BpuMI CCSGG 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 1244
BsaBI GATNNNNATC 2 cut(s) 533, 1185
BsaJI CCNNGG 4 cut(s) 281, 896, 992, 1482
BsaXI ACNNNNNCTCC 2 cut(s) 1208, 1238
Bsc4I CCNNNNNNNGG 3 cut(s) 558, 637, 925
Bse1I ACTGG 1 cut(s) 114
Bse3DI GCAATG 1 cut(s) 322
Bse8I GATNNNNATC 2 cut(s) 533, 1185
BseBI CCWGG 5 cut(s) 898, 994, 1017, 1202, 1230
BseDI CCNNGG 4 cut(s) 281, 896, 992, 1482
BseGI GGATG 6 cut(s) 232, 646, 715, 1158, 1201, 1297
BseJI GATNNNNATC 2 cut(s) 533, 1185
BseLI CCNNNNNNNGG 3 cut(s) 558, 637, 925
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 3 cut(s) 713, 1317, 1443
BseNI ACTGG 1 cut(s) 114
BseRI GAGGAG 2 cut(s) 170, 692
BseSI GKGCMC 2 cut(s) 269, 1024
BseXI GCAGC 5 cut(s) 684, 874, 970, 1074, 1444
BseYI CCCAGC 1 cut(s) 403
Bsh1236I CGCG 3 cut(s) 874, 970, 1165
BshFI GGCC 6 cut(s) 113, 288, 461, 785, 918, 1098
BshNI GGYRCC 1 cut(s) 264
BsiHKAI GWGCWC 5 cut(s) 311, 1024, 1083, 1249, 1255
BsiSI CCGG 1 cut(s) 281
BslFI GGGAC 2 cut(s) 399, 622
BslI CCNNNNNNNGG 3 cut(s) 558, 637, 925
BsmFI GGGAC 2 cut(s) 399, 622
BsnI GGCC 6 cut(s) 113, 288, 461, 785, 918, 1098
Bsp119I TTCGAA 2 cut(s) 34, 86
Bsp1286I GDGCHC 7 cut(s) 269, 311, 1024, 1083, 1221, 1249, 1255
Bsp19I CCATGG 1 cut(s) 1482
BspACI CCGC 8 cut(s) 5, 70, 192, 695, 874, 970, 1163, 1449
BspANI GGCC 6 cut(s) 113, 288, 461, 785, 918, 1098
BspCNI CTCAG 3 cut(s) 714, 1318, 1444
BspFNI CGCG 3 cut(s) 874, 970, 1165
BspLI GGNNCC 8 cut(s) 179, 266, 287, 368, 823, 857, 953, 1218
BspMI ACCTGC 1 cut(s) 86
BspPI GGATC 7 cut(s) 816, 829, 850, 863, 946, 959, 1181
BspT104I TTCGAA 2 cut(s) 34, 86
BspT107I GGYRCC 1 cut(s) 264
BsrDI GCAATG 1 cut(s) 322
BsrI ACTGG 1 cut(s) 114
BssECI CCNNGG 4 cut(s) 281, 896, 992, 1482
BssSI CACGAG 1 cut(s) 1248
BssT1I CCWWGG 1 cut(s) 1482
Bst2BI CACGAG 1 cut(s) 1248
Bst2UI CCWGG 5 cut(s) 898, 994, 1017, 1202, 1230
Bst4CI ACNGT 3 cut(s) 306, 791, 1040
Bst6I CTCTTC 3 cut(s) 38, 342, 587
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstBAI YACGTR 1 cut(s) 1244
BstBI TTCGAA 2 cut(s) 34, 86
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 3 cut(s) 722, 1326, 1452
BstDSI CCRYGG 1 cut(s) 1482
BstF5I GGATG 6 cut(s) 232, 646, 715, 1158, 1201, 1297
BstFNI CGCG 3 cut(s) 874, 970, 1165
BstHHI GCGC 1 cut(s) 232
BstMWI GCNNNNNNNGC 5 cut(s) 78, 1062, 1313, 1457, 1466
BstNI CCWGG 5 cut(s) 898, 994, 1017, 1202, 1230
BstNSI RCATGY 1 cut(s) 358
BstSCI CCNGG 6 cut(s) 280, 896, 992, 1015, 1200, 1228
BstSLI GKGCMC 2 cut(s) 269, 1024
BstUI CGCG 3 cut(s) 874, 970, 1165
BstV1I GCAGC 5 cut(s) 684, 874, 970, 1074, 1444
BstV2I GAAGAC 2 cut(s) 27, 1443
BstX2I RGATCY 5 cut(s) 821, 855, 878, 951, 974
BstXI CCANNNNNNTGG 1 cut(s) 109
BstYI RGATCY 5 cut(s) 821, 855, 878, 951, 974
BsuI GTATCC 1 cut(s) 239
BsuRI GGCC 6 cut(s) 113, 288, 461, 785, 918, 1098
BtgI CCRYGG 1 cut(s) 1482
BtgZI GCGATG 1 cut(s) 1352
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 6 cut(s) 232, 646, 715, 1158, 1201, 1297
BtsIMutI CAGTG 2 cut(s) 462, 796
BveI ACCTGC 1 cut(s) 86
Cac8I GCNNGC 1 cut(s) 95
CfoI GCGC 1 cut(s) 232
Cfr13I GGNCC 5 cut(s) 286, 917, 1013, 1354, 1486
CsiI ACCWGGT 2 cut(s) 1015, 1228
Csp6I GTAC 2 cut(s) 1205, 1241
CspCI CAANNNNNGTGG 4 cut(s) 775, 810, 1075, 1110
CviAII CATG 6 cut(s) 293, 355, 902, 998, 1270, 1483
CviQI GTAC 2 cut(s) 1205, 1241
DdeI CTNAG 3 cut(s) 722, 1326, 1452
DrdI GACNNNNNNGTC 2 cut(s) 476, 494
DseDI GACNNNNNNGTC 2 cut(s) 476, 494
EaeI YGGCCR 3 cut(s) 111, 459, 783
Eam1104I CTCTTC 3 cut(s) 38, 342, 587
EarI CTCTTC 3 cut(s) 38, 342, 587
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 1081
Eco130I CCWWGG 1 cut(s) 1482
Eco24I GRGCYC 2 cut(s) 1083, 1221
Eco47I GGWCC 3 cut(s) 1013, 1354, 1486
Eco53kI GAGCTC 1 cut(s) 1081
Eco57I CTGAAG 5 cut(s) 39, 62, 475, 591, 724
EcoICRI GAGCTC 1 cut(s) 1081
EcoO109I RGGNCCY 1 cut(s) 1354
EcoRI GAATTC 4 cut(s) 122, 206, 726, 814
EcoRII CCWGG 5 cut(s) 896, 992, 1015, 1200, 1228
EcoT14I CCWWGG 1 cut(s) 1482
EcoT22I ATGCAT 1 cut(s) 1498
EcoT38I GRGCYC 2 cut(s) 1083, 1221
ErhI CCWWGG 1 cut(s) 1482
FaeI CATG 6 cut(s) 296, 358, 905, 1001, 1273, 1486
FalI AAGNNNNNCTT 2 cut(s) 1428, 1460
FaqI GGGAC 2 cut(s) 399, 622
FatI CATG 6 cut(s) 292, 354, 901, 997, 1269, 1482
FauI CCCGC 2 cut(s) 1170, 1456
FbaI TGATCA 1 cut(s) 1276
Fnu4HI GCNGC 6 cut(s) 695, 698, 888, 984, 1063, 1458
FokI GGATG 6 cut(s) 239, 653, 722, 1145, 1208, 1304
FriOI GRGCYC 2 cut(s) 1083, 1221
Fsp4HI GCNGC 6 cut(s) 695, 698, 888, 984, 1063, 1458
FspBI CTAG 3 cut(s) 218, 431, 668
GlaI GCGC 1 cut(s) 231
GluI GCNGC 6 cut(s) 695, 698, 888, 984, 1063, 1458
GsaI CCCAGC 1 cut(s) 407
HaeIII GGCC 6 cut(s) 113, 288, 461, 785, 918, 1098
HapII CCGG 1 cut(s) 281
HhaI GCGC 1 cut(s) 232
Hin1II CATG 6 cut(s) 296, 358, 905, 1001, 1273, 1486
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HindIII AAGCTT 1 cut(s) 1513
HinfI GANTC 5 cut(s) 36, 200, 495, 610, 1389
HpaII CCGG 1 cut(s) 281
HphI GGTGA 5 cut(s) 67, 526, 884, 980, 1295
Hpy166II GTNNAC 1 cut(s) 1022
Hpy188I TCNGA 4 cut(s) 205, 494, 732, 1013
Hpy188III TCNNGA 4 cut(s) 40, 364, 707, 819
Hpy8I GTNNAC 1 cut(s) 1022
Hpy99I CGWCG 2 cut(s) 238, 1389
HpyAV CCTTC 3 cut(s) 511, 794, 1367
HpyCH4III ACNGT 3 cut(s) 306, 791, 1040
HpyCH4IV ACGT 2 cut(s) 24, 1243
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 1062, 1313, 1457, 1466
HpyF3I CTNAG 3 cut(s) 722, 1326, 1452
HpySE526I ACGT 2 cut(s) 24, 1243
Hsp92II CATG 6 cut(s) 296, 358, 905, 1001, 1273, 1486
HspAI GCGC 1 cut(s) 230
Ksp22I TGATCA 1 cut(s) 1276
LmnI GCTCC 3 cut(s) 183, 314, 1216
Lsp1109I GCAGC 5 cut(s) 684, 874, 970, 1074, 1444
LweI GCATC 7 cut(s) 217, 519, 660, 1200, 1254, 1456, 1505
MabI ACCWGGT 2 cut(s) 1015, 1228
MaeI CTAG 3 cut(s) 218, 431, 668
MaeII ACGT 2 cut(s) 24, 1243
MaeIII GTNAC 2 cut(s) 170, 1224
MflI RGATCY 5 cut(s) 821, 855, 878, 951, 974
MhlI GDGCHC 7 cut(s) 269, 311, 1024, 1083, 1221, 1249, 1255
MlsI TGGCCA 1 cut(s) 785
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 2 cut(s) 504, 604
Mox20I TGGCCA 1 cut(s) 785
Mph1103I ATGCAT 1 cut(s) 1498
MroXI GAANNNNTTC 2 cut(s) 814, 1440
MscI TGGCCA 1 cut(s) 785
MslI CAYNNNNRTG 2 cut(s) 1149, 1341
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 4 cut(s) 407, 697, 721, 1451
MspI CCGG 1 cut(s) 281
MspR9I CCNGG 6 cut(s) 282, 898, 994, 1017, 1202, 1230
MvaI CCWGG 5 cut(s) 898, 994, 1017, 1202, 1230
MvnI CGCG 3 cut(s) 874, 970, 1165
MwoI GCNNNNNNNGC 5 cut(s) 78, 1062, 1313, 1457, 1466
NciI CCSGG 1 cut(s) 282
NcoI CCATGG 1 cut(s) 1482
NlaIII CATG 6 cut(s) 296, 358, 905, 1001, 1273, 1486
NlaIV GGNNCC 8 cut(s) 179, 266, 287, 368, 823, 857, 953, 1218
NmuCI GTSAC 1 cut(s) 170
NsiI ATGCAT 1 cut(s) 1498
NspI RCATGY 1 cut(s) 358
NspV TTCGAA 2 cut(s) 34, 86
PaqCI CACCTGC 1 cut(s) 86
PciI ACATGT 1 cut(s) 354
PdmI GAANNNNTTC 2 cut(s) 814, 1440
PfeI GAWTC 3 cut(s) 36, 200, 1389
PflMI CCANNNNNTGG 2 cut(s) 558, 637
PkrI GCNGC 6 cut(s) 696, 699, 889, 985, 1064, 1459
PleI GAGTC 2 cut(s) 503, 604
PpsI GAGTC 2 cut(s) 503, 604
Ppu21I YACGTR 1 cut(s) 1244
PpuMI RGGWCCY 1 cut(s) 1354
PscI ACATGT 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 1083
Psp5II RGGWCCY 1 cut(s) 1354
Psp6I CCWGG 5 cut(s) 896, 992, 1015, 1200, 1228
PspFI CCCAGC 1 cut(s) 403
PspGI CCWGG 5 cut(s) 896, 992, 1015, 1200, 1228
PspN4I GGNNCC 8 cut(s) 179, 266, 287, 368, 823, 857, 953, 1218
PspPI GGNCC 5 cut(s) 286, 917, 1013, 1354, 1486
PspPPI RGGWCCY 1 cut(s) 1354
PsuI RGATCY 5 cut(s) 821, 855, 878, 951, 974
PvuII CAGCTG 2 cut(s) 407, 721
RsaI GTAC 2 cut(s) 1206, 1242
RsaNI GTAC 2 cut(s) 1205, 1241
RseI CAYNNNNRTG 2 cut(s) 1149, 1341
SacI GAGCTC 1 cut(s) 1083
SatI GCNGC 6 cut(s) 695, 698, 888, 984, 1063, 1458
Sau96I GGNCC 5 cut(s) 286, 917, 1013, 1354, 1486
SchI GAGTC 2 cut(s) 504, 604
ScrFI CCNGG 6 cut(s) 282, 898, 994, 1017, 1202, 1230
SduI GDGCHC 7 cut(s) 269, 311, 1024, 1083, 1221, 1249, 1255
SexAI ACCWGGT 2 cut(s) 1015, 1228
SfaNI GCATC 7 cut(s) 217, 519, 660, 1200, 1254, 1456, 1505
SfuI TTCGAA 2 cut(s) 34, 86
SinI GGWCC 3 cut(s) 1013, 1354, 1486
SmiMI CAYNNNNRTG 2 cut(s) 1149, 1341
SmlI CTYRAG 1 cut(s) 1516
SmoI CTYRAG 1 cut(s) 1516
SsiI CCGC 8 cut(s) 5, 70, 192, 695, 874, 970, 1163, 1449
SspMI CTAG 3 cut(s) 218, 431, 668
SstI GAGCTC 1 cut(s) 1083
StyD4I CCNGG 6 cut(s) 280, 896, 992, 1015, 1200, 1228
StyI CCWWGG 1 cut(s) 1482
TaaI ACNGT 3 cut(s) 306, 791, 1040
TaiI ACGT 2 cut(s) 27, 1246
TaqI TCGA 5 cut(s) 34, 86, 585, 1083, 1387
TauI GCSGC 1 cut(s) 697
TfiI GAWTC 3 cut(s) 36, 200, 1389
TscAI CASTG 2 cut(s) 469, 796
TseFI GTSAC 1 cut(s) 170
TseI GCWGC 5 cut(s) 697, 887, 983, 1062, 1457
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 6 cut(s) 329, 657, 726, 864, 960, 1147
TspGWI ACGGA 3 cut(s) 158, 1322, 1373
TspRI CASTG 2 cut(s) 469, 796
Van91I CCANNNNNTGG 2 cut(s) 558, 637
VneI GTGCAC 1 cut(s) 1020
VpaK11BI GGWCC 3 cut(s) 1013, 1354, 1486
XapI RAATTY 4 cut(s) 122, 206, 726, 814
XceI RCATGY 1 cut(s) 358
XmnI GAANNNNTTC 2 cut(s) 814, 1440
XspI CTAG 3 cut(s) 218, 431, 668
Zsp2I ATGCAT 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.