RchiOBHm_Chr3g0468171

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000082
Physical Location & Seq
Reverse (-)
14239961 .. 14242966
3006 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43409

Sequence Viewer

Length: 840 bp
ATGGAGGAAGCAAACCTACCGGAAGAGATTATAGTGCTTATCCTCTCCTGGCTTCCCGTGAAATCGTTACTCCGGTTCACCTGCGTTTCCAAACGTTTCCATTTCATCATTCTCTCAGACCCAAAATTCGCCAAGTCCCAATTTCAAGCAGCTTGTGAGCGCAAAACCCTAGCTTGTAGACTCCTCTGCTCCACCACCGCCCCTCGAGTCGAATCCCTTGACTTGGAGACGCCGTCGTTTGGAGACCGTTCCTCTGTTAGGAAGCTCAAACTTCCTCTCCGCCCACCAGCGGGTGAAGTCTTGCCTCTGGGCTCTTGCAATGGTATTGTATTTCTAGCTTTTAACGAGAAAATATTTAATATCTGGAACCCATCAACTGGTTTCTTCAAGAAATTACCTGACCCGGGTTTTTCCCCAAAAGAAAATGAGCTCTTCGTTTATGGTGTCGGCTATCTGCGGGCCACCGACGACTATAAAGTTGTCGTAGCCTCCGCTGGCTTTACTGTTGATGACAAGGTTGAGGCCGCCATTTTCTCGTCCAGAGCTGACGGTTGGAAAACACTTGAGGTCGATTTCGATGGTTCAATTGCTGGTCAGGGGACTCTTTTGAAAGAGGCACTTCATTGGCTTAATGATCAAGAGCATGAAATTGTGGCTTTCGATTTGGCACAAGAGGATGATGAGCACAAGTTGAGGAAAATGCTGCCGCCCAATTTCCATAACGAACGAGGTCGCAAACATGACATCCATCTCGGAGTTTCTACTGGAGGATGCCTGTCTCTAGCTCGTTATCTGCGGGCTTCCGCTGACTCAATTGATGTGTGGGTCATGAGAGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

279

Amino Acids

31.24

Weight (kDa)

6.19

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 43 1.1e-09 F-box domain
F-box-like PF12937 5 - 40 3.5e-09 F-box-like
Beta-prop_KIB1-4 PF03478 84 - 278 3.6e-06 KIB1-4 beta-propeller
FBA_3 PF08268 102 - 226 8e-07 F-box associated beta propeller domain
FBA_1 PF07734 103 - 277 1.5e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 1 cut(s) 89
AccB7I CCANNNNNTGG 1 cut(s) 377
AccI GTMKAC 1 cut(s) 178
AciI CCGC 9 cut(s) 198, 280, 290, 457, 492, 525, 707, 796, 804
AclI AACGTT 1 cut(s) 94
AcsI RAATTY 1 cut(s) 125
AcyI GRCGYC 1 cut(s) 230
AfiI CCNNNNNNNGG 7 cut(s) 223, 239, 258, 289, 290, 377, 404
AgsI TTSAA 4 cut(s) 146, 388, 585, 610
AjnI CCWGG 1 cut(s) 47
AluBI AGCT 7 cut(s) 152, 173, 265, 338, 430, 545, 785
AluI AGCT 7 cut(s) 152, 173, 265, 338, 430, 545, 785
Alw21I GWGCWC 2 cut(s) 432, 687
Alw26I GTCTC 3 cut(s) 221, 237, 783
Ama87I CYCGRG 2 cut(s) 204, 403
AoxI GGCC 2 cut(s) 459, 522
ApeKI GCWGC 2 cut(s) 149, 703
ApoI RAATTY 1 cut(s) 125
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 1 cut(s) 459
AsuC2I CCSGG 2 cut(s) 404, 405
AsuHPI GGTGA 2 cut(s) 70, 305
AvaI CYCGRG 2 cut(s) 204, 403
BanII GRGCYC 2 cut(s) 314, 432
BarI GAAGNNNNNNTAC 1 cut(s) 32
Bbv12I GWGCWC 2 cut(s) 432, 687
BbvI GCAGC 2 cut(s) 161, 690
BccI CCATC 3 cut(s) 379, 572, 756
BceAI ACGGC 1 cut(s) 217
BciT130I CCWGG 1 cut(s) 49
BclI TGATCA 1 cut(s) 634
BcnI CCSGG 2 cut(s) 404, 405
BcoDI GTCTC 3 cut(s) 221, 237, 783
BfaI CTAG 3 cut(s) 170, 335, 782
BfuAI ACCTGC 1 cut(s) 89
BisI GCNGC 4 cut(s) 150, 525, 704, 707
BlsI GCNGC 4 cut(s) 151, 526, 705, 708
Bme1390I CCNGG 3 cut(s) 49, 404, 405
BmeT110I CYCGRG 2 cut(s) 204, 403
BmgT120I GGNCC 1 cut(s) 459
BmiI GGNNCC 1 cut(s) 368
BmrFI CCNGG 3 cut(s) 49, 404, 405
BmsI GCATC 1 cut(s) 761
BpmI CTGGAG 1 cut(s) 786
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 2 cut(s) 404, 405
BsaHI GRCGYC 1 cut(s) 230
BsaI GGTCTC 1 cut(s) 237
BsaJI CCNNGG 1 cut(s) 403
BsaWI WCCGGW 2 cut(s) 19, 72
BsaXI ACNNNNNCTCC 4 cut(s) 218, 248, 261, 291
Bsc4I CCNNNNNNNGG 7 cut(s) 223, 239, 258, 289, 290, 377, 404
Bse1I ACTGG 2 cut(s) 382, 769
Bse3DI GCAATG 1 cut(s) 325
BseBI CCWGG 1 cut(s) 49
BseDI CCNNGG 1 cut(s) 403
BseGI GGATG 3 cut(s) 682, 744, 776
BseLI CCNNNNNNNGG 7 cut(s) 223, 239, 258, 289, 290, 377, 404
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 2 cut(s) 382, 769
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 2 cut(s) 161, 690
BshFI GGCC 2 cut(s) 461, 524
BsiHKAI GWGCWC 2 cut(s) 432, 687
BsiHKCI CYCGRG 2 cut(s) 204, 403
BsiSI CCGG 3 cut(s) 20, 73, 404
BslFI GGGAC 2 cut(s) 121, 613
BslI CCNNNNNNNGG 7 cut(s) 223, 239, 258, 289, 290, 377, 404
BsmAI GTCTC 3 cut(s) 221, 237, 783
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 2 cut(s) 121, 613
BsnI GGCC 2 cut(s) 461, 524
Bso31I GGTCTC 1 cut(s) 237
BsoBI CYCGRG 2 cut(s) 204, 403
Bsp1286I GDGCHC 3 cut(s) 314, 432, 687
Bsp143I GATC 1 cut(s) 634
BspACI CCGC 9 cut(s) 198, 280, 290, 457, 492, 525, 707, 796, 804
BspANI GGCC 2 cut(s) 461, 524
BspCNI CTCAG 1 cut(s) 128
BspHI TCATGA 1 cut(s) 828
BspLI GGNNCC 1 cut(s) 368
BspMI ACCTGC 1 cut(s) 89
BspQI GCTCTTC 1 cut(s) 437
BspTNI GGTCTC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 325
BsrI ACTGG 2 cut(s) 382, 769
BssECI CCNNGG 1 cut(s) 403
BssMI GATC 1 cut(s) 634
BssNI GRCGYC 1 cut(s) 230
Bst2UI CCWGG 1 cut(s) 49
Bst4CI ACNGT 3 cut(s) 248, 505, 551
Bst6I CTCTTC 2 cut(s) 18, 437
BstACI GRCGYC 1 cut(s) 230
BstC8I GCNNGC 3 cut(s) 459, 496, 798
BstDEI CTNAG 1 cut(s) 115
BstENI CCTNNNNNAGG 1 cut(s) 256
BstF5I GGATG 3 cut(s) 682, 744, 776
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 1 cut(s) 637
BstMAI GTCTC 3 cut(s) 221, 237, 783
BstMBI GATC 1 cut(s) 634
BstNI CCWGG 1 cut(s) 49
BstSCI CCNGG 3 cut(s) 47, 402, 403
BstV1I GCAGC 2 cut(s) 161, 690
BsuRI GGCC 2 cut(s) 461, 524
BtsCI GGATG 3 cut(s) 682, 744, 776
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 3 cut(s) 459, 496, 798
CciI TCATGA 1 cut(s) 828
CfoI GCGC 1 cut(s) 162
Cfr13I GGNCC 1 cut(s) 459
Cfr9I CCCGGG 1 cut(s) 403
CseI GACGC 1 cut(s) 238
CviAII CATG 3 cut(s) 644, 740, 829
DdeI CTNAG 1 cut(s) 115
DpnI GATC 1 cut(s) 636
DpnII GATC 1 cut(s) 634
Eam1104I CTCTTC 2 cut(s) 18, 437
EarI CTCTTC 2 cut(s) 18, 437
EciI GGCGGA 1 cut(s) 269
Ecl136II GAGCTC 1 cut(s) 430
Eco24I GRGCYC 2 cut(s) 314, 432
Eco31I GGTCTC 1 cut(s) 237
Eco53kI GAGCTC 1 cut(s) 430
Eco88I CYCGRG 2 cut(s) 204, 403
EcoICRI GAGCTC 1 cut(s) 430
EcoNI CCTNNNNNAGG 1 cut(s) 256
EcoRII CCWGG 1 cut(s) 47
EcoT38I GRGCYC 2 cut(s) 314, 432
Esp3I CGTCTC 1 cut(s) 221
FaeI CATG 3 cut(s) 647, 743, 832
FaiI YATR 7 cut(s) 32, 441, 474, 645, 720, 741, 830
FalI AAGNNNNNCTT 2 cut(s) 603, 635
FaqI GGGAC 2 cut(s) 121, 613
FatI CATG 3 cut(s) 643, 739, 828
FauI CCCGC 3 cut(s) 283, 450, 789
FbaI TGATCA 1 cut(s) 634
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 4 cut(s) 150, 525, 704, 707
FokI GGATG 3 cut(s) 689, 731, 783
FriOI GRGCYC 2 cut(s) 314, 432
Fsp4HI GCNGC 4 cut(s) 150, 525, 704, 707
FspBI CTAG 3 cut(s) 170, 335, 782
GlaI GCGC 1 cut(s) 161
GluI GCNGC 4 cut(s) 150, 525, 704, 707
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 2 cut(s) 461, 524
HapII CCGG 3 cut(s) 20, 73, 404
HgaI GACGC 1 cut(s) 238
HhaI GCGC 1 cut(s) 162
Hin1I GRCGYC 1 cut(s) 230
Hin1II CATG 3 cut(s) 647, 743, 832
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HinfI GANTC 5 cut(s) 180, 207, 212, 601, 809
HpaII CCGG 3 cut(s) 20, 73, 404
HphI GGTGA 2 cut(s) 70, 305
Hpy166II GTNNAC 2 cut(s) 78, 179
Hpy188I TCNGA 2 cut(s) 118, 755
Hpy188III TCNNGA 5 cut(s) 364, 388, 540, 638, 829
Hpy8I GTNNAC 2 cut(s) 78, 179
Hpy99I CGWCG 2 cut(s) 238, 470
HpyCH4III ACNGT 3 cut(s) 248, 505, 551
HpyCH4IV ACGT 1 cut(s) 94
HpyCH4V TGCA 1 cut(s) 318
HpyF3I CTNAG 1 cut(s) 115
HpySE526I ACGT 1 cut(s) 94
Hsp92I GRCGYC 1 cut(s) 230
Hsp92II CATG 3 cut(s) 647, 743, 832
HspAI GCGC 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 634
Kzo9I GATC 1 cut(s) 634
LguI GCTCTTC 1 cut(s) 437
LmnI GCTCC 1 cut(s) 194
Lsp1109I GCAGC 2 cut(s) 161, 690
LweI GCATC 1 cut(s) 761
MaeI CTAG 3 cut(s) 170, 335, 782
MaeII ACGT 1 cut(s) 94
MaeIII GTNAC 1 cut(s) 66
MalI GATC 1 cut(s) 636
MboI GATC 1 cut(s) 634
MboII GAAGA 3 cut(s) 35, 376, 424
MfeI CAATTG 2 cut(s) 585, 813
MhlI GDGCHC 3 cut(s) 314, 432, 687
MluCI AATT 7 cut(s) 125, 140, 392, 585, 648, 712, 813
MlyI GAGTC 4 cut(s) 174, 216, 595, 803
MmeI TCCRAC 1 cut(s) 533
MseI TTAA 3 cut(s) 342, 357, 630
MspA1I CMGCKG 3 cut(s) 290, 494, 806
MspI CCGG 3 cut(s) 20, 73, 404
MspR9I CCNGG 3 cut(s) 49, 404, 405
MunI CAATTG 2 cut(s) 585, 813
MvaI CCWGG 1 cut(s) 49
NciI CCSGG 2 cut(s) 404, 405
NdeII GATC 1 cut(s) 634
NlaIII CATG 3 cut(s) 647, 743, 832
NlaIV GGNNCC 1 cut(s) 368
PaeR7I CTCGAG 1 cut(s) 204
PagI TCATGA 1 cut(s) 828
PaqCI CACCTGC 1 cut(s) 89
PciSI GCTCTTC 1 cut(s) 437
PfeI GAWTC 1 cut(s) 212
PflFI GACNNNGTC 1 cut(s) 232
PflMI CCANNNNNTGG 1 cut(s) 377
PkrI GCNGC 4 cut(s) 151, 526, 705, 708
PleI GAGTC 4 cut(s) 174, 215, 595, 803
PpsI GAGTC 4 cut(s) 174, 215, 595, 803
Psp124BI GAGCTC 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 94
Psp6I CCWGG 1 cut(s) 47
PspGI CCWGG 1 cut(s) 47
PspN4I GGNNCC 1 cut(s) 368
PspPI GGNCC 1 cut(s) 459
PspXI VCTCGAGB 1 cut(s) 204
PsyI GACNNNGTC 1 cut(s) 232
SacI GAGCTC 1 cut(s) 432
SapI GCTCTTC 1 cut(s) 437
SaqAI TTAA 3 cut(s) 342, 357, 630
SatI GCNGC 4 cut(s) 150, 525, 704, 707
Sau3AI GATC 1 cut(s) 634
Sau96I GGNCC 1 cut(s) 459
SchI GAGTC 4 cut(s) 174, 216, 595, 803
ScrFI CCNGG 3 cut(s) 49, 404, 405
SduI GDGCHC 3 cut(s) 314, 432, 687
SfaNI GCATC 1 cut(s) 761
Sfr274I CTCGAG 1 cut(s) 204
SlaI CTCGAG 1 cut(s) 204
SmaI CCCGGG 1 cut(s) 405
SmlI CTYRAG 2 cut(s) 204, 563
SmoI CTYRAG 2 cut(s) 204, 563
Sse9I AATT 7 cut(s) 125, 140, 392, 585, 648, 712, 813
SsiI CCGC 9 cut(s) 198, 280, 290, 457, 492, 525, 707, 796, 804
SspI AATATT 1 cut(s) 354
SspMI CTAG 3 cut(s) 170, 335, 782
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 3 cut(s) 47, 402, 403
TaaI ACNGT 3 cut(s) 248, 505, 551
TaiI ACGT 1 cut(s) 97
TaqI TCGA 5 cut(s) 205, 210, 570, 576, 660
TasI AATT 7 cut(s) 125, 140, 392, 585, 648, 712, 813
TauI GCSGC 2 cut(s) 527, 709
TfiI GAWTC 1 cut(s) 212
Tru1I TTAA 3 cut(s) 342, 357, 630
Tru9I TTAA 3 cut(s) 342, 357, 630
TseI GCWGC 2 cut(s) 149, 703
TspDTI ATGAA 3 cut(s) 94, 611, 660
TspMI CCCGGG 1 cut(s) 403
Tth111I GACNNNGTC 1 cut(s) 232
Van91I CCANNNNNTGG 1 cut(s) 377
XagI CCTNNNNNAGG 1 cut(s) 256
XapI RAATTY 1 cut(s) 125
XhoI CTCGAG 1 cut(s) 204
XmaI CCCGGG 1 cut(s) 403
XmiI GTMKAC 1 cut(s) 178
XspI CTAG 3 cut(s) 170, 335, 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.