FvH4_4g30361

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000082
Physical Location & Seq
Forward (+)
30038531 .. 30039723
1193 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30361.t1

Sequence Viewer

Length: 1107 bp
ATGGCGGGAGTAGACGTCCTACCCGTAGAGATTATACTGCAAATCCTCTCTAGACTTCCGGTCAAATCCTTACTCCGGTTTACCTGCGTCTCGAAACAATGGCGATTTGTCATAAAGTCCGATCTAGAATTTGCCAAATCCCAATTTAAACTAGCTTCTGAGCATAAAACCCTCAATCGCAGGCTCCTCTGCACTGGCGTCTCCCCTGAGCAGTTCGTTTCTCTAGACTTGAAGATGCCGGCGTCGTCGTTTGGAGACAAGTCCTTGTATAGGAAGGTGAATTTCCCTTTCCTGCAACAAGGTGGTAAGGTGAAACAACTAGGGTCTTGCAACGGATTGGTATTTCTAGTACTTGAGGATGAGTCTAGGATTAAGTTTTATGTATGTAACCCATCAACTGGATTCTTCAAGCAATTACCATCCCCGGTCTCAGATGAGGAGGATGTCGTAACCTATAGAATTGGCGTTGGCTATGTGTCGGCCACTGACGACTACAAAGTTCTAGTAGGATACCTTGAAAAAGATCCTGGAGAAGATCCTGGAGTAGTGGAAGCGATCCAGATATTCTCATTGAGAGCTCATTGTTGGAAACGAATTGAAGAACCTGGGGGGACTGGCGGGGTGTATGTCAGTCCCTCTATGGCTCTTTGCAATGAAACACTTCACTGGCTTAGTTTTGAACGCGATCAATTATTTGCTTTTGATCTTGCAAAGGAGGAGTTACGGACAATGCCACTGCCTAATTTTTCCCAAGATGGGATGAATTTTGGCGATATTGGTGTTTCTCATGAAGGCTGCCTGTGTGTTTTGCGCCATTGTCTGAGACCTTGTGATTCTATTGATTTCTGGGTGATGAGAGAGTACGGCGTGCGTGACACTTGGACTAAACAGTTTAGACTGTTTAACTTGATGCTTTCCGATCCGCTTGATAAACCATGGAAACTAATTCGATTCCTGGTGACGGAAAATAGCACATTTGGGTGGACTGACTACACGTTGGCAAGGATTGATCATAAAGAAGAAGAGAAGCATGGCCTGTATGTGGTTAGGGGATATCCGATTTGCATTACTGATTATGAGGAGAGTCTAGTTTGGATCAATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

369

Amino Acids

42.15

Weight (kDa)

5.64

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 3e-10 F-box-like
F-box PF00646 7 - 41 3.3e-10 F-box domain
FBA_3 PF08268 91 - 302 7.4e-14 F-box associated beta propeller domain
FBA_1 PF07734 101 - 330 1.2e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 18
Acc36I ACCTGC 1 cut(s) 92
AccB7I CCANNNNNTGG 1 cut(s) 398
AccI GTMKAC 1 cut(s) 12
AccII CGCG 1 cut(s) 684
AciI CCGC 3 cut(s) 5, 618, 923
AclWI GGATC 5 cut(s) 518, 530, 550, 914, 1103
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 3 cut(s) 128, 280, 763
AcyI GRCGYC 3 cut(s) 15, 198, 242
AfaI GTAC 2 cut(s) 351, 863
AfiI CCNNNNNNNGG 6 cut(s) 75, 270, 398, 756, 961, 1042
AflIII ACRYGT 1 cut(s) 993
AgsI TTSAA 5 cut(s) 232, 409, 518, 599, 680
AhdI GACNNNNNGTC 1 cut(s) 59
AjnI CCWGG 4 cut(s) 526, 538, 604, 954
AluBI AGCT 2 cut(s) 155, 578
AluI AGCT 2 cut(s) 155, 578
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 5 cut(s) 94, 205, 249, 433, 817
AlwI GGATC 5 cut(s) 518, 530, 550, 914, 1103
AoxI GGCC 2 cut(s) 480, 1033
ApeKI GCWGC 1 cut(s) 795
ApoI RAATTY 3 cut(s) 128, 280, 763
Asp700I GAANNNNTTC 1 cut(s) 660
AspLEI GCGC 1 cut(s) 813
AsuC2I CCSGG 1 cut(s) 425
AsuHPI GGTGA 4 cut(s) 289, 322, 862, 970
BanII GRGCYC 1 cut(s) 580
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 1 cut(s) 782
BccI CCATC 3 cut(s) 400, 427, 749
BceAI ACGGC 1 cut(s) 880
BciT130I CCWGG 4 cut(s) 528, 540, 606, 956
BciVI GTATCC 1 cut(s) 503
BclI TGATCA 1 cut(s) 1009
BcnI CCSGG 1 cut(s) 425
BcoDI GTCTC 5 cut(s) 94, 205, 249, 433, 817
BfaI CTAG 9 cut(s) 51, 125, 152, 224, 320, 347, 366, 503, 1088
BfmI CTRYAG 1 cut(s) 454
BfuAI ACCTGC 1 cut(s) 92
BfuI GTATCC 1 cut(s) 503
BisI GCNGC 1 cut(s) 796
BlsI GCNGC 1 cut(s) 797
BmcAI AGTACT 1 cut(s) 351
Bme1390I CCNGG 5 cut(s) 425, 528, 540, 606, 956
BmeRI GACNNNNNGTC 1 cut(s) 59
BmiI GGNNCC 1 cut(s) 185
BmrFI CCNGG 5 cut(s) 425, 528, 540, 606, 956
BmsI GCATC 2 cut(s) 225, 900
BpmI CTGGAG 2 cut(s) 549, 561
Bpu10I CCTNAGC 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 374
BpuMI CCSGG 1 cut(s) 425
BsaHI GRCGYC 3 cut(s) 15, 198, 242
BsaI GGTCTC 2 cut(s) 433, 817
BsaJI CCNNGG 3 cut(s) 423, 605, 935
BsaWI WCCGGW 2 cut(s) 58, 75
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 6 cut(s) 75, 270, 398, 756, 961, 1042
Bse118I RCCGGY 1 cut(s) 238
Bse1I ACTGG 4 cut(s) 199, 403, 619, 671
Bse3DI GCAATG 1 cut(s) 658
BseBI CCWGG 4 cut(s) 528, 540, 606, 956
BseDI CCNNGG 3 cut(s) 423, 605, 935
BseGI GGATG 4 cut(s) 364, 419, 448, 765
BseLI CCNNNNNNNGG 6 cut(s) 75, 270, 398, 756, 961, 1042
BseMI GCAATG 1 cut(s) 658
BseMII CTCAG 4 cut(s) 150, 198, 444, 812
BseNI ACTGG 4 cut(s) 199, 403, 619, 671
BseRI GAGGAG 4 cut(s) 176, 452, 731, 1094
BseXI GCAGC 1 cut(s) 782
BsgI GTGCAG 1 cut(s) 175
Bsh1236I CGCG 1 cut(s) 684
BshFI GGCC 2 cut(s) 482, 1035
BsiHKAI GWGCWC 1 cut(s) 580
BsiSI CCGG 4 cut(s) 59, 76, 239, 425
BslFI GGGAC 2 cut(s) 618, 625
BslI CCNNNNNNNGG 6 cut(s) 75, 270, 398, 756, 961, 1042
BsmAI GTCTC 5 cut(s) 94, 205, 249, 433, 817
BsmBI CGTCTC 2 cut(s) 94, 205
BsmFI GGGAC 2 cut(s) 618, 625
BsnI GGCC 2 cut(s) 482, 1035
Bso31I GGTCTC 2 cut(s) 433, 817
Bsp1286I GDGCHC 1 cut(s) 580
Bsp143I GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
Bsp19I CCATGG 1 cut(s) 935
BspACI CCGC 3 cut(s) 5, 618, 923
BspANI GGCC 2 cut(s) 482, 1035
BspCNI CTCAG 4 cut(s) 151, 199, 443, 813
BspFNI CGCG 1 cut(s) 684
BspHI TCATGA 1 cut(s) 787
BspLI GGNNCC 1 cut(s) 185
BspMI ACCTGC 1 cut(s) 92
BspPI GGATC 5 cut(s) 518, 530, 550, 914, 1103
BspTNI GGTCTC 2 cut(s) 433, 817
BsrDI GCAATG 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 238
BsrI ACTGG 4 cut(s) 199, 403, 619, 671
BssAI RCCGGY 1 cut(s) 238
BssECI CCNNGG 3 cut(s) 423, 605, 935
BssMI GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
BssNI GRCGYC 3 cut(s) 15, 198, 242
BssT1I CCWWGG 1 cut(s) 935
Bst2UI CCWGG 4 cut(s) 528, 540, 606, 956
Bst4CI ACNGT 2 cut(s) 891, 900
Bst6I CTCTTC 1 cut(s) 1017
BstACI GRCGYC 3 cut(s) 15, 198, 242
BstC8I GCNNGC 3 cut(s) 182, 240, 869
BstDEI CTNAG 5 cut(s) 159, 207, 430, 671, 821
BstDSI CCRYGG 1 cut(s) 935
BstENI CCTNNNNNAGG 1 cut(s) 268
BstF5I GGATG 4 cut(s) 364, 419, 448, 765
BstFNI CGCG 1 cut(s) 684
BstHHI GCGC 1 cut(s) 813
BstKTI GATC 9 cut(s) 124, 526, 538, 558, 688, 706, 922, 1012, 1098
BstMAI GTCTC 5 cut(s) 94, 205, 249, 433, 817
BstMBI GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
BstNI CCWGG 4 cut(s) 528, 540, 606, 956
BstSCI CCNGG 5 cut(s) 423, 526, 538, 604, 954
BstSFI CTRYAG 1 cut(s) 454
BstUI CGCG 1 cut(s) 684
BstV1I GCAGC 1 cut(s) 782
BstX2I RGATCY 2 cut(s) 523, 535
BstYI RGATCY 2 cut(s) 523, 535
BsuI GTATCC 1 cut(s) 503
BsuRI GGCC 2 cut(s) 482, 1035
BtgI CCRYGG 1 cut(s) 935
BtsCI GGATG 4 cut(s) 364, 419, 448, 765
BtsI GCAGTG 1 cut(s) 734
BtsIMutI CAGTG 4 cut(s) 192, 483, 664, 734
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 3 cut(s) 182, 240, 869
CciI TCATGA 1 cut(s) 787
CfoI GCGC 1 cut(s) 813
Cfr10I RCCGGY 1 cut(s) 238
CseI GACGC 3 cut(s) 76, 187, 231
Csp6I GTAC 2 cut(s) 350, 862
CviAII CATG 3 cut(s) 788, 936, 1031
CviJI RGCY 9 cut(s) 155, 184, 471, 482, 578, 644, 670, 795, 1035
CviKI_1 RGCY 9 cut(s) 155, 184, 471, 482, 578, 644, 670, 795, 1035
CviQI GTAC 2 cut(s) 350, 862
DdeI CTNAG 5 cut(s) 159, 207, 430, 671, 821
DpnI GATC 9 cut(s) 123, 525, 537, 557, 687, 705, 921, 1011, 1097
DpnII GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
DraI TTTAAA 1 cut(s) 148
DriI GACNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 1017
Eam1105I GACNNNNNGTC 1 cut(s) 59
EarI CTCTTC 1 cut(s) 1017
Ecl136II GAGCTC 1 cut(s) 578
Eco130I CCWWGG 1 cut(s) 935
Eco24I GRGCYC 1 cut(s) 580
Eco31I GGTCTC 2 cut(s) 433, 817
Eco32I GATATC 1 cut(s) 1055
Eco53kI GAGCTC 1 cut(s) 578
EcoICRI GAGCTC 1 cut(s) 578
EcoNI CCTNNNNNAGG 1 cut(s) 268
EcoRII CCWGG 4 cut(s) 526, 538, 604, 954
EcoRV GATATC 1 cut(s) 1055
EcoT14I CCWWGG 1 cut(s) 935
EcoT38I GRGCYC 1 cut(s) 580
ErhI CCWWGG 1 cut(s) 935
Esp3I CGTCTC 2 cut(s) 94, 205
FaeI CATG 3 cut(s) 791, 939, 1034
FaqI GGGAC 2 cut(s) 618, 625
FatI CATG 3 cut(s) 787, 935, 1030
FauI CCCGC 1 cut(s) 611
FbaI TGATCA 1 cut(s) 1009
FblI GTMKAC 1 cut(s) 12
Fnu4HI GCNGC 1 cut(s) 796
FokI GGATG 4 cut(s) 371, 406, 455, 772
FriOI GRGCYC 1 cut(s) 580
Fsp4HI GCNGC 1 cut(s) 796
FspBI CTAG 9 cut(s) 51, 125, 152, 224, 320, 347, 366, 503, 1088
GlaI GCGC 1 cut(s) 812
GluI GCNGC 1 cut(s) 796
GsuI CTGGAG 2 cut(s) 549, 561
HaeIII GGCC 2 cut(s) 482, 1035
HapII CCGG 4 cut(s) 59, 76, 239, 425
HgaI GACGC 3 cut(s) 76, 187, 231
HhaI GCGC 1 cut(s) 813
Hin1I GRCGYC 3 cut(s) 15, 198, 242
Hin1II CATG 3 cut(s) 791, 939, 1034
Hin6I GCGC 1 cut(s) 811
HinP1I GCGC 1 cut(s) 811
HinfI GANTC 5 cut(s) 362, 402, 833, 951, 1084
HpaII CCGG 4 cut(s) 59, 76, 239, 425
HphI GGTGA 4 cut(s) 289, 322, 862, 970
Hpy166II GTNNAC 3 cut(s) 13, 81, 984
Hpy188I TCNGA 6 cut(s) 121, 160, 433, 822, 919, 1059
Hpy188III TCNNGA 6 cut(s) 51, 91, 125, 224, 559, 788
Hpy8I GTNNAC 3 cut(s) 13, 81, 984
Hpy99I CGWCG 2 cut(s) 247, 250
HpyAV CCTTC 2 cut(s) 268, 785
HpyCH4III ACNGT 2 cut(s) 891, 900
HpyCH4IV ACGT 2 cut(s) 15, 995
HpyCH4V TGCA 7 cut(s) 40, 192, 295, 330, 651, 710, 1065
HpyF3I CTNAG 5 cut(s) 159, 207, 430, 671, 821
HpySE526I ACGT 2 cut(s) 15, 995
Hsp92I GRCGYC 3 cut(s) 15, 198, 242
Hsp92II CATG 3 cut(s) 791, 939, 1034
HspAI GCGC 1 cut(s) 811
KroI GCCGGC 1 cut(s) 238
KroNI GCCGGC 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 1009
Kzo9I GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
LmnI GCTCC 1 cut(s) 189
Lsp1109I GCAGC 1 cut(s) 782
LweI GCATC 2 cut(s) 225, 900
MaeI CTAG 9 cut(s) 51, 125, 152, 224, 320, 347, 366, 503, 1088
MaeII ACGT 2 cut(s) 15, 995
MaeIII GTNAC 5 cut(s) 386, 448, 720, 872, 958
MalI GATC 9 cut(s) 123, 525, 537, 557, 687, 705, 921, 1011, 1097
MboI GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
MboII GAAGA 6 cut(s) 244, 397, 545, 611, 1031, 1034
MflI RGATCY 2 cut(s) 523, 535
MhlI GDGCHC 1 cut(s) 580
MlyI GAGTC 2 cut(s) 371, 1093
MmeI TCCRAC 1 cut(s) 566
MnlI CCTC 9 cut(s) 56, 182, 197, 349, 430, 433, 646, 709, 1072
MroNI GCCGGC 1 cut(s) 238
MroXI GAANNNNTTC 1 cut(s) 660
MseI TTAA 3 cut(s) 147, 372, 903
MslI CAYNNNNRTG 1 cut(s) 979
MspI CCGG 4 cut(s) 59, 76, 239, 425
MspR9I CCNGG 5 cut(s) 425, 528, 540, 606, 956
MvaI CCWGG 4 cut(s) 528, 540, 606, 956
MvnI CGCG 1 cut(s) 684
NaeI GCCGGC 1 cut(s) 240
NciI CCSGG 1 cut(s) 425
NcoI CCATGG 1 cut(s) 935
NdeII GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
NgoMIV GCCGGC 1 cut(s) 238
NlaIII CATG 3 cut(s) 791, 939, 1034
NlaIV GGNNCC 1 cut(s) 185
NmuCI GTSAC 2 cut(s) 872, 958
PagI TCATGA 1 cut(s) 787
PcsI WCGNNNNNNNCGW 1 cut(s) 21
PdiI GCCGGC 1 cut(s) 240
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 3 cut(s) 402, 833, 951
PflMI CCANNNNNTGG 1 cut(s) 398
PfoI TCCNGGA 2 cut(s) 526, 538
PkrI GCNGC 1 cut(s) 797
PleI GAGTC 2 cut(s) 370, 1092
PpsI GAGTC 2 cut(s) 370, 1092
Psp124BI GAGCTC 1 cut(s) 580
Psp6I CCWGG 4 cut(s) 526, 538, 604, 954
PspGI CCWGG 4 cut(s) 526, 538, 604, 954
PspN4I GGNNCC 1 cut(s) 185
PsuI RGATCY 2 cut(s) 523, 535
RsaI GTAC 2 cut(s) 351, 863
RsaNI GTAC 2 cut(s) 350, 862
RseI CAYNNNNRTG 1 cut(s) 979
SacI GAGCTC 1 cut(s) 580
SaqAI TTAA 3 cut(s) 147, 372, 903
SatI GCNGC 1 cut(s) 796
Sau3AI GATC 9 cut(s) 121, 523, 535, 555, 685, 703, 919, 1009, 1095
ScaI AGTACT 1 cut(s) 351
SchI GAGTC 2 cut(s) 371, 1093
ScrFI CCNGG 5 cut(s) 425, 528, 540, 606, 956
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 2 cut(s) 225, 900
SfcI CTRYAG 1 cut(s) 454
SmiMI CAYNNNNRTG 1 cut(s) 979
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
SsiI CCGC 3 cut(s) 5, 618, 923
SspMI CTAG 9 cut(s) 51, 125, 152, 224, 320, 347, 366, 503, 1088
SstI GAGCTC 1 cut(s) 580
StyD4I CCNGG 5 cut(s) 423, 526, 538, 604, 954
StyI CCWWGG 1 cut(s) 935
TaaI ACNGT 2 cut(s) 891, 900
TaiI ACGT 2 cut(s) 18, 998
TaqI TCGA 2 cut(s) 92, 949
TatI WGTACW 1 cut(s) 349
TfiI GAWTC 3 cut(s) 402, 833, 951
Tru1I TTAA 3 cut(s) 147, 372, 903
Tru9I TTAA 3 cut(s) 147, 372, 903
TscAI CASTG 4 cut(s) 199, 490, 671, 741
TseFI GTSAC 2 cut(s) 872, 958
TseI GCWGC 1 cut(s) 795
Tsp45I GTSAC 2 cut(s) 872, 958
TspDTI ATGAA 3 cut(s) 669, 776, 804
TspGWI ACGGA 3 cut(s) 348, 739, 977
TspRI CASTG 4 cut(s) 199, 490, 671, 741
Van91I CCANNNNNTGG 1 cut(s) 398
XagI CCTNNNNNAGG 1 cut(s) 268
XapI RAATTY 3 cut(s) 128, 280, 763
XbaI TCTAGA 3 cut(s) 50, 124, 223
XmiI GTMKAC 1 cut(s) 12
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 9 cut(s) 51, 125, 152, 224, 320, 347, 366, 503, 1088
ZraI GACGTC 1 cut(s) 16
ZrmI AGTACT 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.