RLG00000017625

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000082
Physical Location & Seq
Reverse (-)
19272592 .. 19276032
3441 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017625

Sequence Viewer

Length: 1176 bp
ATGCCTGGAAAGTTTTATGGTGTGGGCTATTTGTCCGCCACTGATGACTACAAAGTTTTGGTAGGCTGCTCTAGCTATGACTATGGCCTTCATGAAAAGGAGAGAGAGGTCCTGATGTTCTCAGTGAGAACTCATCTTTGGGAGAGGATTGAATCCCTCAGCGATGTTGAACTCCGTTGTCAGGGGACTTTTTTGAATAATGCACTTCATTGGCTAAATCACCATAACGAGCATGAAATGGTTTCTTTTGACTTGGCAGAGGAGGTGCTCCGGAGAATGCAACCACTGCCTAATTTCGACCATGATGGTAAGAGTTTAAGCTATCTTGGGGTTTGTGGAGGGTGCCTGTGTGTGTCGCGTGTTCCGGAGGGTGCTTGTGACTCTATGGATCTCTGGGTCATGAGAGAATATGACCTGAGTGACTCGTGGACTATGCTCTTTAGCTTAAAGCTCTCCCATCCGCATGAGTTTTACTCGTGTTCCACAGAATTATCGGTTATGGATAGTAGTACAGTTGCCGCGAGTTGGACTGCCCAGGCGTTCCAGTTGATAGGGATTGAGCTTGGGCGCTATAGGATTAAGGGGCGTCGGATTTCTATGATTGAATATGAAGAAAGTCTACTTTGGATTAGTGGTTATCACCCTGGACAAAAGAAAGAGCAGGTCCAGATACTAGACACCCATCAGAAGGCATCAGGAAGCTTAATAGGGTTTCAGTTTTGGCTCCTGCTCGGTGCTTTGGCTCTCAACGCCTTCTTCTCCCTTGCCATCTTCAATTCGTTGGATGATACGCCGTCGTTTGGAGACCCTTCCTCCGTTAGAAAGCTCAGCTTCCCTTTGCAGCCACAACCGGGCCGTCTTGTCTCGGAGTTTGAGGTCAAGATGTTCTCATTGAGAACTCATCTTTGGGAGAGGGTTGTATACCCCTGCGGCTCCGATGTGGAGATCGATAGTCATGGGACTCTTTCGAATAATGCACTTCATTGGCTAAACTACCAGGACGAGGATGAAATGCTTTCTTTTGACTTGGCAGTGCAGGAGTTCCGGAGAATGCTGCTGCCTAATTTCAACCATGAATCCATGATGGTAAGATCGAGCTTCAGCAATCTTGGGGTGTGTACGTGGAGGATGCCTGTGAGTGTCGCGTTATCTGGAGGGTGCTTGTCACTCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

392

Amino Acids

44.6

Weight (kDa)

5.29

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 4 - 174 3.1e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 652
AccB1I GGYRCC 1 cut(s) 342
AccI GTMKAC 2 cut(s) 619, 921
AccII CGCG 3 cut(s) 358, 521, 1145
AccIII TCCGGA 3 cut(s) 270, 364, 1044
AciI CCGC 4 cut(s) 36, 461, 519, 930
AclWI GGATC 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 1084
AcyI GRCGYC 1 cut(s) 586
AfaI GTAC 2 cut(s) 511, 1120
AfiI CCNNNNNNNGG 6 cut(s) 181, 525, 688, 800, 851, 1003
AgsI TTSAA 6 cut(s) 152, 170, 196, 605, 775, 1069
AjnI CCWGG 4 cut(s) 4, 534, 643, 996
AjuI GAANNNNNNNTTGG 4 cut(s) 121, 153, 889, 921
AluBI AGCT 9 cut(s) 75, 321, 444, 451, 562, 702, 826, 831, 1098
AluI AGCT 9 cut(s) 75, 321, 444, 451, 562, 702, 826, 831, 1098
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 2 cut(s) 798, 868
AlwI GGATC 1 cut(s) 396
Aor13HI TCCGGA 3 cut(s) 270, 364, 1044
AoxI GGCC 2 cut(s) 85, 853
ApeKI GCWGC 4 cut(s) 66, 841, 1054, 1057
AspLEI GCGC 1 cut(s) 570
AspS9I GGNCC 3 cut(s) 109, 664, 853
AsuC2I CCSGG 1 cut(s) 852
AsuHPI GGTGA 2 cut(s) 212, 632
AsuII TTCGAA 1 cut(s) 968
AvaII GGWCC 2 cut(s) 109, 664
BanI GGYRCC 1 cut(s) 342
BarI GAAGNNNNNNTAC 2 cut(s) 603, 635
BauI CACGAG 2 cut(s) 424, 475
Bbv12I GWGCWC 1 cut(s) 270
BbvCI CCTCAGC 1 cut(s) 158
BbvI GCAGC 4 cut(s) 53, 853, 1041, 1044
BccI CCATC 5 cut(s) 299, 465, 690, 776, 1078
BceAI ACGGC 2 cut(s) 778, 840
BciT130I CCWGG 4 cut(s) 6, 536, 645, 998
BcnI CCSGG 1 cut(s) 852
BcoDI GTCTC 2 cut(s) 798, 868
BfaI CTAG 2 cut(s) 72, 674
BfmI CTRYAG 1 cut(s) 571
BfoI RGCGCY 1 cut(s) 571
BfuAI ACCTGC 1 cut(s) 652
BisI GCNGC 6 cut(s) 67, 519, 842, 931, 1055, 1058
BlpI GCTNAGC 1 cut(s) 827
BlsI GCNGC 6 cut(s) 68, 520, 843, 932, 1056, 1059
Bme1390I CCNGG 5 cut(s) 6, 536, 645, 852, 998
Bme18I GGWCC 2 cut(s) 109, 664
BmgT120I GGNCC 3 cut(s) 109, 664, 853
BmiI GGNNCC 3 cut(s) 344, 725, 934
BmrFI CCNGG 5 cut(s) 6, 536, 645, 852, 998
BmsI GCATC 2 cut(s) 701, 1119
BplI GAGNNNNNCTC 2 cut(s) 458, 490
BpmI CTGGAG 1 cut(s) 1173
Bpu10I CCTNAGC 1 cut(s) 158
Bpu1102I GCTNAGC 1 cut(s) 827
Bpu14I TTCGAA 1 cut(s) 968
BpuMI CCSGG 1 cut(s) 852
Bsa29I ATCGAT 1 cut(s) 948
BsaAI YACGTR 1 cut(s) 1122
BsaHI GRCGYC 1 cut(s) 586
BsaI GGTCTC 1 cut(s) 798
BsaJI CCNNGG 2 cut(s) 534, 643
BsaWI WCCGGW 3 cut(s) 270, 364, 1044
BsaXI ACNNNNNCTCC 2 cut(s) 797, 827
Bsc4I CCNNNNNNNGG 6 cut(s) 181, 525, 688, 800, 851, 1003
Bse1I ACTGG 1 cut(s) 544
BseAI TCCGGA 3 cut(s) 270, 364, 1044
BseBI CCWGG 4 cut(s) 6, 536, 645, 998
BseCI ATCGAT 1 cut(s) 948
BseDI CCNNGG 2 cut(s) 534, 643
BseGI GGATG 4 cut(s) 457, 790, 1012, 1134
BseLI CCNNNNNNNGG 6 cut(s) 181, 525, 688, 800, 851, 1003
BseMII CTCAG 4 cut(s) 135, 172, 407, 841
BseNI ACTGG 1 cut(s) 544
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 4 cut(s) 53, 853, 1041, 1044
BsgI GTGCAG 1 cut(s) 1055
Bsh1236I CGCG 3 cut(s) 358, 521, 1145
BshFI GGCC 2 cut(s) 87, 855
BshNI GGYRCC 1 cut(s) 342
BshVI ATCGAT 1 cut(s) 948
BsiHKAI GWGCWC 1 cut(s) 270
BsiSI CCGG 4 cut(s) 271, 365, 851, 1045
BslFI GGGAC 2 cut(s) 199, 973
BslI CCNNNNNNNGG 6 cut(s) 181, 525, 688, 800, 851, 1003
BsmAI GTCTC 2 cut(s) 798, 868
BsmFI GGGAC 2 cut(s) 199, 973
BsmI GAATGC 2 cut(s) 282, 1056
BsnI GGCC 2 cut(s) 87, 855
Bso31I GGTCTC 1 cut(s) 798
Bsp119I TTCGAA 1 cut(s) 968
Bsp1286I GDGCHC 1 cut(s) 270
Bsp13I TCCGGA 3 cut(s) 270, 364, 1044
Bsp143I GATC 3 cut(s) 388, 945, 1091
Bsp1720I GCTNAGC 1 cut(s) 827
BspACI CCGC 4 cut(s) 36, 461, 519, 930
BspANI GGCC 2 cut(s) 87, 855
BspCNI CTCAG 4 cut(s) 134, 171, 408, 840
BspDI ATCGAT 1 cut(s) 948
BspEI TCCGGA 3 cut(s) 270, 364, 1044
BspFNI CGCG 3 cut(s) 358, 521, 1145
BspHI TCATGA 2 cut(s) 91, 399
BspLI GGNNCC 3 cut(s) 344, 725, 934
BspMI ACCTGC 1 cut(s) 652
BspPI GGATC 1 cut(s) 396
BspT104I TTCGAA 1 cut(s) 968
BspT107I GGYRCC 1 cut(s) 342
BspTNI GGTCTC 1 cut(s) 798
BsrI ACTGG 1 cut(s) 544
BssECI CCNNGG 2 cut(s) 534, 643
BssMI GATC 3 cut(s) 388, 945, 1091
BssNAI GTATAC 1 cut(s) 922
BssNI GRCGYC 1 cut(s) 586
BssSI CACGAG 2 cut(s) 424, 475
Bst1107I GTATAC 1 cut(s) 922
Bst2BI CACGAG 2 cut(s) 424, 475
Bst2UI CCWGG 4 cut(s) 6, 536, 645, 998
Bst4CI ACNGT 1 cut(s) 514
BstACI GRCGYC 1 cut(s) 586
BstAPI GCANNNNNTGC 1 cut(s) 286
BstBAI YACGTR 1 cut(s) 1122
BstBI TTCGAA 1 cut(s) 968
BstDEI CTNAG 4 cut(s) 121, 158, 416, 827
BstF5I GGATG 4 cut(s) 457, 790, 1012, 1134
BstFNI CGCG 3 cut(s) 358, 521, 1145
BstH2I RGCGCY 1 cut(s) 571
BstHHI GCGC 1 cut(s) 570
BstKTI GATC 3 cut(s) 391, 948, 1094
BstMAI GTCTC 2 cut(s) 798, 868
BstMBI GATC 3 cut(s) 388, 945, 1091
BstMWI GCNNNNNNNGC 3 cut(s) 72, 286, 749
BstNI CCWGG 4 cut(s) 6, 536, 645, 998
BstSCI CCNGG 5 cut(s) 4, 534, 643, 850, 996
BstSFI CTRYAG 1 cut(s) 571
BstUI CGCG 3 cut(s) 358, 521, 1145
BstV1I GCAGC 4 cut(s) 53, 853, 1041, 1044
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BstZ17I GTATAC 1 cut(s) 922
Bsu15I ATCGAT 1 cut(s) 948
BsuRI GGCC 2 cut(s) 87, 855
BsuTUI ATCGAT 1 cut(s) 948
BtgZI GCGATG 1 cut(s) 177
BtsCI GGATG 4 cut(s) 457, 790, 1012, 1134
BtsI GCAGTG 2 cut(s) 284, 1038
BtsIMutI CAGTG 4 cut(s) 39, 129, 284, 1038
BveI ACCTGC 1 cut(s) 652
CciI TCATGA 2 cut(s) 91, 399
CfoI GCGC 1 cut(s) 570
Cfr13I GGNCC 3 cut(s) 109, 664, 853
ClaI ATCGAT 1 cut(s) 948
CseI GACGC 1 cut(s) 575
Csp6I GTAC 2 cut(s) 510, 1119
CviAII CATG 8 cut(s) 92, 233, 302, 400, 464, 956, 1073, 1081
CviQI GTAC 2 cut(s) 510, 1119
DdeI CTNAG 4 cut(s) 121, 158, 416, 827
DpnI GATC 3 cut(s) 390, 947, 1093
DpnII GATC 3 cut(s) 388, 945, 1091
EciI GGCGGA 1 cut(s) 25
Eco31I GGTCTC 1 cut(s) 798
Eco47I GGWCC 2 cut(s) 109, 664
Eco57I CTGAAG 1 cut(s) 1084
EcoO109I RGGNCCY 1 cut(s) 109
EcoRII CCWGG 4 cut(s) 4, 534, 643, 996
FaeI CATG 8 cut(s) 95, 236, 305, 403, 467, 959, 1076, 1084
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 2 cut(s) 199, 973
FatI CATG 8 cut(s) 91, 232, 301, 399, 463, 955, 1072, 1080
FblI GTMKAC 2 cut(s) 619, 921
Fnu4HI GCNGC 6 cut(s) 67, 519, 842, 931, 1055, 1058
FokI GGATG 4 cut(s) 444, 797, 1019, 1141
Fsp4HI GCNGC 6 cut(s) 67, 519, 842, 931, 1055, 1058
FspBI CTAG 2 cut(s) 72, 674
GlaI GCGC 1 cut(s) 569
GluI GCNGC 6 cut(s) 67, 519, 842, 931, 1055, 1058
GsuI CTGGAG 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 571
HaeIII GGCC 2 cut(s) 87, 855
HapII CCGG 4 cut(s) 271, 365, 851, 1045
HgaI GACGC 1 cut(s) 575
HhaI GCGC 1 cut(s) 570
Hin1I GRCGYC 1 cut(s) 586
Hin1II CATG 8 cut(s) 95, 236, 305, 403, 467, 959, 1076, 1084
Hin6I GCGC 1 cut(s) 568
HinP1I GCGC 1 cut(s) 568
HindIII AAGCTT 1 cut(s) 700
HinfI GANTC 5 cut(s) 152, 380, 422, 961, 1076
HpaII CCGG 4 cut(s) 271, 365, 851, 1045
HphI GGTGA 2 cut(s) 212, 632
Hpy166II GTNNAC 4 cut(s) 429, 620, 922, 1119
Hpy188I TCNGA 4 cut(s) 591, 687, 868, 937
Hpy8I GTNNAC 4 cut(s) 429, 620, 922, 1119
Hpy99I CGWCG 2 cut(s) 591, 799
HpyAV CCTTC 4 cut(s) 98, 682, 763, 819
HpyCH4III ACNGT 1 cut(s) 514
HpyCH4IV ACGT 1 cut(s) 1121
HpyCH4V TGCA 5 cut(s) 203, 280, 841, 977, 1036
HpyF10VI GCNNNNNNNGC 3 cut(s) 72, 286, 749
HpyF3I CTNAG 4 cut(s) 121, 158, 416, 827
HpySE526I ACGT 1 cut(s) 1121
Hsp92I GRCGYC 1 cut(s) 586
Hsp92II CATG 8 cut(s) 95, 236, 305, 403, 467, 959, 1076, 1084
HspAI GCGC 1 cut(s) 568
Kpn2I TCCGGA 3 cut(s) 270, 364, 1044
Kzo9I GATC 3 cut(s) 388, 945, 1091
LmnI GCTCC 3 cut(s) 273, 729, 938
Lsp1109I GCAGC 4 cut(s) 53, 853, 1041, 1044
LweI GCATC 2 cut(s) 701, 1119
MaeI CTAG 2 cut(s) 72, 674
MaeII ACGT 1 cut(s) 1121
MaeIII GTNAC 3 cut(s) 377, 419, 1164
MalI GATC 3 cut(s) 390, 947, 1093
MboI GATC 3 cut(s) 388, 945, 1091
MboII GAAGA 3 cut(s) 623, 748, 763
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 1 cut(s) 270
MluCI AATT 4 cut(s) 292, 488, 775, 1063
MlyI GAGTC 3 cut(s) 374, 416, 955
MmeI TCCRAC 3 cut(s) 506, 569, 762
MroI TCCGGA 3 cut(s) 270, 364, 1044
MseI TTAA 4 cut(s) 317, 446, 579, 704
MslI CAYNNNNRTG 1 cut(s) 462
MspI CCGG 4 cut(s) 271, 365, 851, 1045
MspR9I CCNGG 5 cut(s) 6, 536, 645, 852, 998
Mva1269I GAATGC 2 cut(s) 282, 1056
MvaI CCWGG 4 cut(s) 6, 536, 645, 998
MvnI CGCG 3 cut(s) 358, 521, 1145
MwoI GCNNNNNNNGC 3 cut(s) 72, 286, 749
NciI CCSGG 1 cut(s) 852
NdeII GATC 3 cut(s) 388, 945, 1091
NlaIII CATG 8 cut(s) 95, 236, 305, 403, 467, 959, 1076, 1084
NlaIV GGNNCC 3 cut(s) 344, 725, 934
NmuCI GTSAC 3 cut(s) 377, 419, 1164
NspV TTCGAA 1 cut(s) 968
PagI TCATGA 2 cut(s) 91, 399
PctI GAATGC 2 cut(s) 282, 1056
PfeI GAWTC 2 cut(s) 152, 1076
PkrI GCNGC 6 cut(s) 68, 520, 843, 932, 1056, 1059
PleI GAGTC 3 cut(s) 374, 416, 955
PpsI GAGTC 3 cut(s) 374, 416, 955
Ppu21I YACGTR 1 cut(s) 1122
PpuMI RGGWCCY 1 cut(s) 109
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 4 cut(s) 4, 534, 643, 996
PspGI CCWGG 4 cut(s) 4, 534, 643, 996
PspN4I GGNNCC 3 cut(s) 344, 725, 934
PspPI GGNCC 3 cut(s) 109, 664, 853
PspPPI RGGWCCY 1 cut(s) 109
PsuI RGATCY 1 cut(s) 388
RsaI GTAC 2 cut(s) 511, 1120
RsaNI GTAC 2 cut(s) 510, 1119
RseI CAYNNNNRTG 1 cut(s) 462
SaqAI TTAA 4 cut(s) 317, 446, 579, 704
SatI GCNGC 6 cut(s) 67, 519, 842, 931, 1055, 1058
Sau3AI GATC 3 cut(s) 388, 945, 1091
Sau96I GGNCC 3 cut(s) 109, 664, 853
SchI GAGTC 3 cut(s) 374, 416, 955
ScrFI CCNGG 5 cut(s) 6, 536, 645, 852, 998
SduI GDGCHC 1 cut(s) 270
SfaNI GCATC 2 cut(s) 701, 1119
SfcI CTRYAG 1 cut(s) 571
SfuI TTCGAA 1 cut(s) 968
SinI GGWCC 2 cut(s) 109, 664
SmiMI CAYNNNNRTG 1 cut(s) 462
Sse9I AATT 4 cut(s) 292, 488, 775, 1063
SsiI CCGC 4 cut(s) 36, 461, 519, 930
SspMI CTAG 2 cut(s) 72, 674
StyD4I CCNGG 5 cut(s) 4, 534, 643, 850, 996
TaaI ACNGT 1 cut(s) 514
TaiI ACGT 1 cut(s) 1124
TaqI TCGA 4 cut(s) 297, 948, 968, 1094
TasI AATT 4 cut(s) 292, 488, 775, 1063
TatI WGTACW 1 cut(s) 509
TauI GCSGC 2 cut(s) 521, 933
TfiI GAWTC 2 cut(s) 152, 1076
Tru1I TTAA 4 cut(s) 317, 446, 579, 704
Tru9I TTAA 4 cut(s) 317, 446, 579, 704
TscAI CASTG 4 cut(s) 46, 129, 291, 1038
TseFI GTSAC 3 cut(s) 377, 419, 1164
TseI GCWGC 4 cut(s) 66, 841, 1054, 1057
Tsp45I GTSAC 3 cut(s) 377, 419, 1164
TspDTI ATGAA 8 cut(s) 80, 108, 197, 249, 624, 971, 1023, 1089
TspGWI ACGGA 2 cut(s) 164, 805
TspRI CASTG 4 cut(s) 46, 129, 291, 1038
VpaK11BI GGWCC 2 cut(s) 109, 664
XmiI GTMKAC 2 cut(s) 619, 921
XspI CTAG 2 cut(s) 72, 674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.