FvH4_3g14950

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000082
Physical Location & Seq
Forward (+)
9250529 .. 9252551
2023 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14950.t1

Sequence Viewer

Length: 1089 bp
ATGGCGGAAACTGACCTACTACCTGAAGAAGTCATGCTGAGCATTCTGTGTTTGCTGCCCGTGAAATTCTTGATCCGATTCACCTCCGTCTCGAAACGATGGCGTTTCATCATCTTGTCCGACCCCCAACTCGCCACATCTCAACTCAACAGAGCTCGTCAGCTGAAAGCCCTCGGTCCCCGACTCATCTTCCTAACCAACGCTCCTCAGCTGGAATCCCTAGACTTGGCTGATACGGCGTCGTTTGGACACCCTTCCTCCGTCAGAAAACTGAGCCTCCCTTTCGAGCGACATGCACGCCGTGACGTCACCATACTGGGCTCCTGCAATGGGTTGGTGTGTGTAGCTTTTGACGCTTCCTACTTTTACATCTGGAACCCAGCAACCCGATTCTTCATGGAGTTGCCTGAGCCGGGCTTTCCCGACGTCTGTCAACAACTCACGTTTCATGGTGTTGGGTACTTGTCTGCCACCGACGACTACAGAGTTTTCGCAACCTCATATGGGGCGTATCCAGATGAATATGGATACTCATATGAAGAGGCAGAAGAGATGAAGATGTTCTCCTCCAGATCTCGAGTTTGGAAAGCAATCCGACACCCTGCTGGTCATGACACACGCTCTTCTAATCAGGGCACTCTTTTGAATGAGAGACTTCATTGGTTCTCTTGGTGGCGGATGATGGATCCTTTAATCCTTGCTTTCGATCTCGCAACAGAGGAGTTCACCACAATGCGTCTGCCTGAGCAATTTAAGCCTGAGGAACTACCAAATGGCATAATCTTTATTGTAGACTTCTGCTGTCTTGGGATTACCGACGGATGCTTGTGTGCATGTGATTATCTTCGTGCTGACTCTGTCGATTTCTGGGTCATGAGAGAATATGGTGTGGATGACTCGTGGACTAAGCTGTTTAACTTTTCCTCTGACGGTCCTGGCCGGTGTGGAGATTGGTTGATTATGGAGAGCTGTACAGTTGCCGTGAAAAGTCCATACTGGTCATTGGTAAAGATCGATCATAAACAAGAAGAAGAAGTTGGAATTGCTGGGTTTCTGGATGTGCGAAATAGGAATGGCTTCATGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

363

Amino Acids

41.5

Weight (kDa)

5.13

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 44 4.1e-07 F-box-like
F-box PF00646 6 - 41 1.5e-07 F-box domain
b-prop_At3g26010-like PF24750 72 - 250 5.2e-07 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 87 - 302 1.4e-12 F-box associated beta propeller domain
FBA_1 PF07734 96 - 309 3.5e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 309, 429
AccI GTMKAC 1 cut(s) 792
AciI CCGC 2 cut(s) 5, 676
AclWI GGATC 3 cut(s) 67, 680, 693
AcoI YGGCCR 1 cut(s) 937
AcsI RAATTY 1 cut(s) 65
AcuI CTGAAG 1 cut(s) 45
AcyI GRCGYC 3 cut(s) 239, 306, 426
AdeI CACNNNGTG 1 cut(s) 302
AfaI GTAC 2 cut(s) 461, 973
AfiI CCNNNNNNNGG 4 cut(s) 226, 330, 413, 504
AgsI TTSAA 1 cut(s) 646
AjnI CCWGG 1 cut(s) 934
AjuI GAANNNNNNNTTGG 2 cut(s) 1020, 1052
AluBI AGCT 6 cut(s) 155, 163, 211, 347, 910, 969
AluI AGCT 6 cut(s) 155, 163, 211, 347, 910, 969
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 2 cut(s) 94, 646
AlwI GGATC 3 cut(s) 67, 680, 693
Ama87I CYCGRG 1 cut(s) 576
AoxI GGCC 1 cut(s) 937
ApeKI GCWGC 1 cut(s) 55
ApoI RAATTY 1 cut(s) 65
Asp700I GAANNNNTTC 2 cut(s) 560, 1076
AspS9I GGNCC 2 cut(s) 176, 932
AsuC2I CCSGG 1 cut(s) 414
AsuHPI GGTGA 3 cut(s) 73, 301, 718
AvaI CYCGRG 1 cut(s) 576
AvaII GGWCC 2 cut(s) 176, 932
AxyI CCTNAGG 1 cut(s) 759
BaeGI GKGCMC 1 cut(s) 638
BamHI GGATCC 1 cut(s) 685
BanII GRGCYC 2 cut(s) 157, 323
BauI CACGAG 1 cut(s) 898
Bbv12I GWGCWC 1 cut(s) 157
BbvCI CCTCAGC 1 cut(s) 207
BbvI GCAGC 1 cut(s) 42
BccI CCATC 2 cut(s) 93, 676
BceAI ACGGC 3 cut(s) 252, 285, 965
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 1 cut(s) 936
BciVI GTATCC 2 cut(s) 521, 522
BcnI CCSGG 1 cut(s) 414
BcoDI GTCTC 2 cut(s) 94, 646
BfaI CTAG 2 cut(s) 221, 1087
BfmI CTRYAG 1 cut(s) 481
BfuI GTATCC 2 cut(s) 521, 522
BglII AGATCT 1 cut(s) 572
BisI GCNGC 1 cut(s) 56
BlpI GCTNAGC 1 cut(s) 38
BlsI GCNGC 1 cut(s) 57
Bme1390I CCNGG 2 cut(s) 414, 936
Bme18I GGWCC 2 cut(s) 176, 932
BmeT110I CYCGRG 1 cut(s) 576
BmgT120I GGNCC 2 cut(s) 176, 932
BmiI GGNNCC 4 cut(s) 178, 322, 377, 687
BmrFI CCNGG 2 cut(s) 414, 936
BmrI ACTGGG 1 cut(s) 326
BmsI GCATC 1 cut(s) 812
BmuI ACTGGG 1 cut(s) 326
BoxI GACNNNNGTC 1 cut(s) 429
BpmI CTGGAG 1 cut(s) 553
Bpu10I CCTNAGC 3 cut(s) 207, 408, 744
Bpu1102I GCTNAGC 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 414
Bsa29I ATCGAT 1 cut(s) 1014
BsaHI GRCGYC 3 cut(s) 239, 306, 426
BsaJI CCNNGG 1 cut(s) 172
BsaXI ACNNNNNCTCC 6 cut(s) 187, 217, 242, 261, 272, 291
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 330, 413, 504
Bse118I RCCGGY 1 cut(s) 939
Bse1I ACTGG 2 cut(s) 321, 1001
Bse21I CCTNAGG 1 cut(s) 759
Bse3DI GCAATG 1 cut(s) 334
BseBI CCWGG 1 cut(s) 936
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 1 cut(s) 172
BseGI GGATG 4 cut(s) 684, 827, 898, 1063
BseLI CCNNNNNNNGG 4 cut(s) 226, 330, 413, 504
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 6 cut(s) 29, 221, 263, 399, 735, 750
BseNI ACTGG 2 cut(s) 321, 1001
BseRI GAGGAG 3 cut(s) 195, 556, 734
BseSI GKGCMC 1 cut(s) 638
BseXI GCAGC 1 cut(s) 42
BseYI CCCAGC 2 cut(s) 379, 1046
BshFI GGCC 1 cut(s) 939
BshVI ATCGAT 1 cut(s) 1014
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 576
BsiSI CCGG 2 cut(s) 413, 940
BslFI GGGAC 1 cut(s) 162
BslI CCNNNNNNNGG 4 cut(s) 226, 330, 413, 504
BsmAI GTCTC 2 cut(s) 94, 646
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 162
BsmI GAATGC 1 cut(s) 42
BsnI GGCC 1 cut(s) 939
BsoBI CYCGRG 1 cut(s) 576
Bsp1286I GDGCHC 3 cut(s) 157, 323, 638
Bsp1407I TGTACA 1 cut(s) 971
Bsp143I GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
Bsp1720I GCTNAGC 1 cut(s) 38
BspACI CCGC 2 cut(s) 5, 676
BspANI GGCC 1 cut(s) 939
BspCNI CTCAG 6 cut(s) 30, 220, 264, 400, 736, 751
BspDI ATCGAT 1 cut(s) 1014
BspHI TCATGA 3 cut(s) 610, 873, 1080
BspLI GGNNCC 4 cut(s) 178, 322, 377, 687
BspPI GGATC 3 cut(s) 67, 680, 693
BspQI GCTCTTC 1 cut(s) 628
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 1 cut(s) 939
BsrGI TGTACA 1 cut(s) 971
BsrI ACTGG 2 cut(s) 321, 1001
BssAI RCCGGY 1 cut(s) 939
BssECI CCNNGG 1 cut(s) 172
BssMI GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
BssNI GRCGYC 3 cut(s) 239, 306, 426
BssSI CACGAG 1 cut(s) 898
Bst2BI CACGAG 1 cut(s) 898
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 2 cut(s) 932, 976
Bst6I CTCTTC 3 cut(s) 534, 543, 628
BstACI GRCGYC 3 cut(s) 239, 306, 426
BstAUI TGTACA 1 cut(s) 971
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 7 cut(s) 38, 207, 272, 408, 744, 759, 906
BstF5I GGATG 4 cut(s) 684, 827, 898, 1063
BstKTI GATC 7 cut(s) 75, 575, 688, 709, 1014, 1018, 1086
BstMAI GTCTC 2 cut(s) 94, 646
BstMBI GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
BstMWI GCNNNNNNNGC 3 cut(s) 236, 353, 754
BstNI CCWGG 1 cut(s) 936
BstNSI RCATGY 2 cut(s) 296, 837
BstPAI GACNNNNGTC 1 cut(s) 429
BstSCI CCNGG 2 cut(s) 412, 934
BstSFI CTRYAG 1 cut(s) 481
BstSLI GKGCMC 1 cut(s) 638
BstV1I GCAGC 1 cut(s) 42
BstX2I RGATCY 2 cut(s) 572, 685
BstYI RGATCY 2 cut(s) 572, 685
Bsu15I ATCGAT 1 cut(s) 1014
Bsu36I CCTNAGG 1 cut(s) 759
BsuI GTATCC 2 cut(s) 521, 522
BsuRI GGCC 1 cut(s) 939
BsuTUI ATCGAT 1 cut(s) 1014
BtsCI GGATG 4 cut(s) 684, 827, 898, 1063
Cac8I GCNNGC 1 cut(s) 298
CciI TCATGA 3 cut(s) 610, 873, 1080
Cfr10I RCCGGY 1 cut(s) 939
Cfr13I GGNCC 2 cut(s) 176, 932
ClaI ATCGAT 1 cut(s) 1014
CseI GACGC 3 cut(s) 228, 362, 725
Csp6I GTAC 2 cut(s) 460, 972
CviAII CATG 8 cut(s) 34, 293, 397, 449, 611, 834, 874, 1081
CviQI GTAC 2 cut(s) 460, 972
DdeI CTNAG 7 cut(s) 38, 207, 272, 408, 744, 759, 906
DpnI GATC 7 cut(s) 74, 574, 687, 708, 1013, 1017, 1085
DpnII GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
DraIII CACNNNGTG 1 cut(s) 302
EaeI YGGCCR 1 cut(s) 937
Eam1104I CTCTTC 3 cut(s) 534, 543, 628
EarI CTCTTC 3 cut(s) 534, 543, 628
EciI GGCGGA 2 cut(s) 20, 691
Ecl136II GAGCTC 1 cut(s) 155
Eco24I GRGCYC 2 cut(s) 157, 323
Eco47I GGWCC 2 cut(s) 176, 932
Eco53kI GAGCTC 1 cut(s) 155
Eco57I CTGAAG 1 cut(s) 45
Eco81I CCTNAGG 1 cut(s) 759
Eco88I CYCGRG 1 cut(s) 576
EcoICRI GAGCTC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 934
EcoT38I GRGCYC 2 cut(s) 157, 323
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 8 cut(s) 37, 296, 400, 452, 614, 837, 877, 1084
FaqI GGGAC 1 cut(s) 162
FatI CATG 8 cut(s) 33, 292, 396, 448, 610, 833, 873, 1080
FauNDI CATATG 2 cut(s) 502, 535
FblI GTMKAC 1 cut(s) 792
Fnu4HI GCNGC 1 cut(s) 56
FokI GGATG 4 cut(s) 691, 834, 905, 1070
FriOI GRGCYC 2 cut(s) 157, 323
Fsp4HI GCNGC 1 cut(s) 56
FspBI CTAG 2 cut(s) 221, 1087
GluI GCNGC 1 cut(s) 56
GsaI CCCAGC 2 cut(s) 383, 1050
GsuI CTGGAG 1 cut(s) 553
HaeIII GGCC 1 cut(s) 939
HapII CCGG 2 cut(s) 413, 940
HgaI GACGC 3 cut(s) 228, 362, 725
Hin1I GRCGYC 3 cut(s) 239, 306, 426
Hin1II CATG 8 cut(s) 37, 296, 400, 452, 614, 837, 877, 1084
HincII GTYRAC 1 cut(s) 434
HindII GTYRAC 1 cut(s) 434
HinfI GANTC 6 cut(s) 78, 183, 215, 390, 854, 896
HpaII CCGG 2 cut(s) 413, 940
HphI GGTGA 3 cut(s) 73, 301, 718
Hpy166II GTNNAC 4 cut(s) 434, 726, 793, 903
Hpy188I TCNGA 5 cut(s) 77, 121, 266, 596, 928
Hpy8I GTNNAC 4 cut(s) 434, 726, 793, 903
Hpy99I CGWCG 4 cut(s) 244, 428, 479, 821
HpyAV CCTTC 1 cut(s) 264
HpyCH4III ACNGT 2 cut(s) 932, 976
HpyCH4IV ACGT 3 cut(s) 306, 426, 443
HpyCH4V TGCA 3 cut(s) 296, 327, 833
HpyF10VI GCNNNNNNNGC 3 cut(s) 236, 353, 754
HpyF3I CTNAG 7 cut(s) 38, 207, 272, 408, 744, 759, 906
HpySE526I ACGT 3 cut(s) 306, 426, 443
Hsp92I GRCGYC 3 cut(s) 239, 306, 426
Hsp92II CATG 8 cut(s) 37, 296, 400, 452, 614, 837, 877, 1084
Kzo9I GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
LguI GCTCTTC 1 cut(s) 628
LmnI GCTCC 2 cut(s) 208, 326
Lsp1109I GCAGC 1 cut(s) 42
LweI GCATC 1 cut(s) 812
MaeI CTAG 2 cut(s) 221, 1087
MaeII ACGT 3 cut(s) 306, 426, 443
MaeIII GTNAC 2 cut(s) 302, 307
MalI GATC 7 cut(s) 74, 574, 687, 708, 1013, 1017, 1085
MboI GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
MflI RGATCY 2 cut(s) 572, 685
MhlI GDGCHC 3 cut(s) 157, 323, 638
MluCI AATT 3 cut(s) 65, 749, 1041
MlyI GAGTC 3 cut(s) 177, 848, 890
MmeI TCCRAC 3 cut(s) 144, 619, 1018
MroXI GAANNNNTTC 2 cut(s) 560, 1076
MseI TTAA 3 cut(s) 692, 753, 915
MslI CAYNNNNRTG 1 cut(s) 731
MspA1I CMGCKG 2 cut(s) 163, 211
MspI CCGG 2 cut(s) 413, 940
MspR9I CCNGG 2 cut(s) 414, 936
Mva1269I GAATGC 1 cut(s) 42
MvaI CCWGG 1 cut(s) 936
MwoI GCNNNNNNNGC 3 cut(s) 236, 353, 754
NciI CCSGG 1 cut(s) 414
NdeI CATATG 2 cut(s) 502, 535
NdeII GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
NlaIII CATG 8 cut(s) 37, 296, 400, 452, 614, 837, 877, 1084
NlaIV GGNNCC 4 cut(s) 178, 322, 377, 687
NmuCI GTSAC 2 cut(s) 302, 307
NspI RCATGY 2 cut(s) 296, 837
PaeR7I CTCGAG 1 cut(s) 576
PagI TCATGA 3 cut(s) 610, 873, 1080
PciSI GCTCTTC 1 cut(s) 628
PctI GAATGC 1 cut(s) 42
PdmI GAANNNNTTC 2 cut(s) 560, 1076
PfeI GAWTC 3 cut(s) 78, 215, 390
PflFI GACNNNGTC 1 cut(s) 857
PkrI GCNGC 1 cut(s) 57
PleI GAGTC 3 cut(s) 177, 848, 890
PpsI GAGTC 3 cut(s) 177, 848, 890
PshAI GACNNNNGTC 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 157
Psp6I CCWGG 1 cut(s) 934
PspFI CCCAGC 2 cut(s) 379, 1046
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 4 cut(s) 178, 322, 377, 687
PspPI GGNCC 2 cut(s) 176, 932
PsuI RGATCY 2 cut(s) 572, 685
PsyI GACNNNGTC 1 cut(s) 857
PvuII CAGCTG 2 cut(s) 163, 211
RsaI GTAC 2 cut(s) 461, 973
RsaNI GTAC 2 cut(s) 460, 972
RseI CAYNNNNRTG 1 cut(s) 731
SacI GAGCTC 1 cut(s) 157
SapI GCTCTTC 1 cut(s) 628
SaqAI TTAA 3 cut(s) 692, 753, 915
SatI GCNGC 1 cut(s) 56
Sau3AI GATC 7 cut(s) 72, 572, 685, 706, 1011, 1015, 1083
Sau96I GGNCC 2 cut(s) 176, 932
SchI GAGTC 3 cut(s) 177, 848, 890
ScrFI CCNGG 2 cut(s) 414, 936
SduI GDGCHC 3 cut(s) 157, 323, 638
SfaNI GCATC 1 cut(s) 812
SfcI CTRYAG 1 cut(s) 481
Sfr274I CTCGAG 1 cut(s) 576
SinI GGWCC 2 cut(s) 176, 932
SlaI CTCGAG 1 cut(s) 576
SmiMI CAYNNNNRTG 1 cut(s) 731
SmlI CTYRAG 1 cut(s) 576
SmoI CTYRAG 1 cut(s) 576
Sse9I AATT 3 cut(s) 65, 749, 1041
SsiI CCGC 2 cut(s) 5, 676
SspMI CTAG 2 cut(s) 221, 1087
SstI GAGCTC 1 cut(s) 157
StyD4I CCNGG 2 cut(s) 412, 934
TaaI ACNGT 2 cut(s) 932, 976
TaiI ACGT 3 cut(s) 309, 429, 446
TaqI TCGA 6 cut(s) 92, 285, 577, 705, 861, 1014
TaqII GACCGA 1 cut(s) 164
TasI AATT 3 cut(s) 65, 749, 1041
TatI WGTACW 1 cut(s) 971
TfiI GAWTC 3 cut(s) 78, 215, 390
Tru1I TTAA 3 cut(s) 692, 753, 915
Tru9I TTAA 3 cut(s) 692, 753, 915
TseFI GTSAC 2 cut(s) 302, 307
TseI GCWGC 1 cut(s) 55
Tsp45I GTSAC 2 cut(s) 302, 307
TspDTI ATGAA 8 cut(s) 97, 385, 437, 534, 552, 569, 647, 1069
TspGWI ACGGA 3 cut(s) 76, 250, 834
Tth111I GACNNNGTC 1 cut(s) 857
VpaK11BI GGWCC 2 cut(s) 176, 932
XapI RAATTY 1 cut(s) 65
XceI RCATGY 2 cut(s) 296, 837
XhoI CTCGAG 1 cut(s) 576
XmiI GTMKAC 1 cut(s) 792
XmnI GAANNNNTTC 2 cut(s) 560, 1076
XspI CTAG 2 cut(s) 221, 1087
ZraI GACGTC 2 cut(s) 307, 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.