Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0009822

Physical Location & Seq

Genomic Coordinates Forward (+)

13433908 .. 13441903

Gene Structure 7996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g10680.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2727 bp

ATGTCGTGGATTAGAAATGCGGTGAACCTGGCAGTGGAAGCAGGGGCCGCCAACAGCCTCACCCGCACCGTACGAAACTACACCGACACCGTCGTCCTCCACGCCGGCAATGCCGTCGCCGGCGGAGCTAGACTCCTCCTCCCTGACCGCATTCGTCCCAGGAATTTACAGAGTTTTAAGCAGACTGTGAAAAGATTGGAAGAAGTTTCTGTTTCTTGCAGAGGTGTAGAAAGGGTTCAGCTGCTGAGGAGGTGGCTGGTTTCACTCAAAGAAATCGAGAGATTGTCCACCCTTTACAACGCGAGAAACGGAAAGGGTTCTGAAGACCACCTTAAATCCGATGAGTCAGCAGACTCCCCGAGGAAACCTACCCTGGTTTATTACGTAGACTCTGATGCTGGAGATGAACCGAAAACTTTTCGTGATGTCTTTCTTCATAGCCAAGCTCTGGAGGGCATGACATTATCCACGATTCTTGAAGAGCCAAATGAGGAAGAAGTTTCGCTACTTTTGCAGATATATGGGCTCTGTCTTACAGGAGGAAAGGAAGTACATAATGCAGTAATGAGCAGCGTACAGAATTTGGCAATTGCACTTTCGTACTATCAAGATGAAGTACTGATAAAGCGAGAGGAATTGCTGCAATTTGCTCAAAGTGCAATTGCAGGGCTGAAAATAAATGCAGATCTTGCAAGAATAGATGCTGAAGCCTGCAGTATAAGGGAAGAACTTGATAAATTGATGGCACACCAGAAGCCTCTTAGTGAAGGTTGTGAAAAATCATCTAAGAAGACAAGAGATGCGACAATAGAGAATTTAAAAGACGCGCTTGTAGAAATTCAACTATGTTCCAGGTTGGAGGCTCTGTTACTAAAGAAGAAATCATTGAGCAATGGGGACTCACCCGAGATGCATTATGAAAAGGTTGAGAAATTGAAAATATTATCAGAATCTCTTGCTAACTCCACCTCACAAGCTGAAAAGCGCATTTCAGACCACAGGTTTCAGGAAGAAGAAGCACTCAGCTTTCGTGTAGCTAAAGCCAACGAAGTAAGCCAAGTTGAGAAGGAACTGGTGGCAGAGATCGGAAAACTTGAGAGGCAAAGAGAAGAACTCCAAAATGAACTGAAAAAGGTGATTATCGCGTTGAAGGCCGTTCGTGCACGCCTTCACAATGCAAGGGAAGAAAGAGAACAATTTGATGAAGCAAGCAATCAGATTCTTGTACACATAAAAGCAAAGGAAGATGAGCTCTCAAAATCTATTGATTCATGTAAAGCAGAAGTTGATGTTGTAAATACGTGGGTTAGTTTTTTGGAAGATACCTGGGTTCTGCAGTCTTCGTACACACAGCAAAAAGAGAAGCAGGTCAATGGCGAACTGGAGAGATATGGAGACTATTTTGTGAATTTGGTAATCCAACTTCTCTCCACTTACAAGGCAAACTTGGGATCATCAATCACTCGCATCAGGACTCTCGTGGAGTGCTTGAACTCAAGTAAAGGAGCAAATATACCGGGCATAGACGATGGAAGTTCAAAAGAAAGCAACCCGAGGAAAAATCTTGAGGAGGATTATGTGGACATGGAAGCCAAGTTTCTGACCACCTTAAGTGTAGTGGATACCATGAAAAAGCAGTTCTATGTTCAAAGCGAAGGCATTTTCAGGAGAGATGATGAGAAGGTCAAAGAACTCTTTGATGCCATCAAAAATTTAAATGATGAATTTGAATCCATTGACAGACCAATATTGGAAACTGAAGCTTCACCGCGAAGACCAGAGACGCCCTCTAGTGATAGGGCCATTACAAGTCCATCTCCTACCGCTACCTCTCCTTTGACAACCGGGACTCCAGAACTCAAACATGATGCCAATTCTTCCTTGACTAAGGGAGAGAAGACACTGGACCCAAAGGAAGATACAAAACTAGGGCAGGAACTTGGTAAGACTGCCCCATTGTCCACCGGGACTCCAGAACTCAAACAGGATACCAATTCTTCCTTGACTAAGGGGGAGAAGGCACTGGACCCAAAGGAAGATACAAAACTAGGGCCGGAACTTGGTAAAACTACTGCCCCATTGACCACTGGGAGTCCAGAACTCAAGCAGGAGACCAATTCTTCCTTGACTAAGGGGGAGAAGACACTGGACCCTAAGGAAGATTCAAAACTAGGACCGGAACTTGGTAAGACTGCCCCATTGACCACCGGGACTCCAGAGCTCAAACAGGGTACCAATGCTTCCTTGACTAAGGGGGAGAAGACACTGGACATAAAGGAAGACACAAAACTAGGGCCGCAACTTGGTAAGACTGCCCCATCGCCCACCAGGACTCCAGAACTCAAACAGGATACCAATTCTTCCTTGACTAAGGGGGAGAAGACATTGGACCCAAAGGAAAATACAAAACAAGGGCCGGAACTTGGTAAGGCTGCCCCATTGACCACTGGGACTCCAGAACTCAAACAGGATGAAGTTTCCAATTCTTTCTTCATCAAGGGGTCAAATCCACTAGACCTGCAGGAAGAGTTGCCGAAACTAGACCCTGATCTTGGGAAGACCAGTCCAATGACCACTGAGACTCCAGAACTTAAAAAGCACGAAGCAAAGGAAGAGCCGGCGAAACTACAGCCAGAACTTGGGAAGTTTGTCAAAGAAATCTCAGTGGATGAGATTTGCGATATGGTGTTTGATGAACTTGAAAAGGAAGTGAAAAGAACTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

909

Amino Acids

100.81

Weight (kDa)

5.26

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37370 AT2G37370 AT2G37370 AT2G37370
fragaria_vesca	FvH4_6g14710
malus_domestica	MD04G1116900.v1.1 MD04G1117000.v1.1 MD12G1132600.v1.1
prunus_persica	Prupe.6G246700_v2.0.a1 Prupe.6G246700_v2.0.a1
pyrus_communis	pycom04g10680 pycom12g12840
rosa_chinensis	RchiOBHm_Chr3g0467931
rosa_laevigata	RLG00000024467
rosa_multiflora	Rmu_sc0001793.1_g000053
rosa_roxburghii	Rroxscaffold_6G00413300
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139000 Rh3BG160600 Rh3CG160500 Rh3DG161100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	92
Acc36I	ACCTGC	2 cut(s)	1357, 2526
Acc65I	GGTACC	1 cut(s)	2231
AccB1I	GGYRCC	1 cut(s)	2231
AccB7I	CCANNNNNTGG	2 cut(s)	448, 2639
AccI	GTMKAC	1 cut(s)	387
AccII	CGCG	4 cut(s)	302, 827, 1145, 1771
AciI	CCGC	8 cut(s)	20, 48, 64, 123, 148, 1769, 1824, 2297
AclWI	GGATC	1 cut(s)	1459
AcsI	RAATTY	7 cut(s)	163, 580, 814, 837, 1408, 1711, 1724
AcuI	CTGAAG	3 cut(s)	342, 726, 1779
AcyI	GRCGYC	1 cut(s)	1784
AfaI	GTAC	8 cut(s)	72, 552, 576, 602, 618, 1227, 1346, 2233
AfiI	CCNNNNNNNGG	8 cut(s)	34, 448, 2060, 2183, 2303, 2423, 2552, 2639
AflII	CTTAAG	1 cut(s)	1609
AjnI	CCWGG	6 cut(s)	27, 158, 372, 851, 1325, 2327
AjuI	GAANNNNNNNTTGG	2 cut(s)	2474, 2506
Alw21I	GWGCWC	3 cut(s)	1165, 1254, 2223
Alw26I	GTCTC	4 cut(s)	1389, 1775, 2105, 2573
Alw44I	GTGCAC	1 cut(s)	1161
AlwI	GGATC	1 cut(s)	1459
AlwNI	CAGNNNCTG	1 cut(s)	244
Ama87I	CYCGRG	3 cut(s)	358, 905, 1552
AoxI	GGCC	6 cut(s)	45, 1152, 1800, 2051, 2294, 2414
ApaLI	GTGCAC	1 cut(s)	1161
ApeKI	GCWGC	4 cut(s)	241, 570, 640, 2432
ApoI	RAATTY	7 cut(s)	163, 580, 814, 837, 1408, 1711, 1724
Asp700I	GAANNNNTTC	2 cut(s)	234, 316
Asp718I	GGTACC	1 cut(s)	2231
AspLEI	GCGC	2 cut(s)	829, 987
AsuC2I	CCSGG	4 cut(s)	1518, 1846, 1966, 2209
AsuHPI	GGTGA	5 cut(s)	34, 52, 894, 1147, 1758
AvaI	CYCGRG	3 cut(s)	358, 905, 1552
AvaII	GGWCC	5 cut(s)	1906, 2026, 2149, 2174, 2389
AxyI	CCTNAGG	1 cut(s)	2154
BaeGI	GKGCMC	1 cut(s)	1165
BaeI	ACNNNNGTAYC	2 cut(s)	1314, 1347
BanI	GGYRCC	1 cut(s)	2231
BanII	GRGCYC	3 cut(s)	528, 1254, 2223
BarI	GAAGNNNNNNTAC	6 cut(s)	489, 521, 1407, 1439, 2224, 2256
BauI	CACGAG	1 cut(s)	1478
Bbv12I	GWGCWC	3 cut(s)	1165, 1254, 2223
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	4 cut(s)	228, 582, 627, 2419
BccI	CCATC	5 cut(s)	736, 1523, 1712, 1822, 2326
BceAI	ACGGC	2 cut(s)	98, 1139
BcgI	CGANNNNNNTGC	2 cut(s)	97, 131
BciT130I	CCWGG	6 cut(s)	29, 160, 374, 853, 1327, 2329
BciVI	GTATCC	3 cut(s)	1615, 1981, 2344
BcnI	CCSGG	4 cut(s)	1518, 1846, 1966, 2209
BcoDI	GTCTC	4 cut(s)	1389, 1775, 2105, 2573
BfaI	CTAG	9 cut(s)	129, 1791, 1928, 2048, 2171, 2291, 2513, 2540, 2721
BfmI	CTRYAG	4 cut(s)	712, 1334, 2519, 2627
BfrI	CTTAAG	1 cut(s)	1609
BfuAI	ACCTGC	2 cut(s)	1357, 2526
BfuI	GTATCC	3 cut(s)	1615, 1981, 2344
BglII	AGATCT	1 cut(s)	685
BisI	GCNGC	6 cut(s)	48, 242, 571, 641, 2297, 2433
BlsI	GCNGC	6 cut(s)	49, 243, 572, 642, 2298, 2434
BmcAI	AGTACT	1 cut(s)	618
Bme18I	GGWCC	5 cut(s)	1906, 2026, 2149, 2174, 2389
BmeT110I	CYCGRG	3 cut(s)	358, 905, 1552
BmiI	GGNNCC	6 cut(s)	46, 1908, 2028, 2151, 2233, 2391
BmrI	ACTGGG	2 cut(s)	2097, 2457
BmsI	GCATC	7 cut(s)	385, 691, 790, 900, 1476, 1690, 1858
BmuI	ACTGGG	2 cut(s)	2097, 2457
BplI	GAGNNNNNCTC	6 cut(s)	117, 149, 1098, 1130, 1772, 1804
BpmI	CTGGAG	9 cut(s)	420, 470, 1403, 1836, 1956, 2199, 2319, 2439, 2568
Bpu10I	CCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	4 cut(s)	1115, 1480, 1586, 2087
BpuMI	CCSGG	4 cut(s)	1518, 1846, 1966, 2209
BsaAI	YACGTR	2 cut(s)	385, 1302
BsaHI	GRCGYC	1 cut(s)	1784
BsaI	GGTCTC	1 cut(s)	2105
BsaJI	CCNNGG	5 cut(s)	158, 359, 372, 1326, 1553
BsaWI	WCCGGW	1 cut(s)	2176
Bsc4I	CCNNNNNNNGG	8 cut(s)	34, 448, 2060, 2183, 2303, 2423, 2552, 2639
Bse118I	RCCGGY	3 cut(s)	104, 119, 2617
Bse1I	ACTGG	9 cut(s)	1077, 1386, 1908, 2028, 2092, 2151, 2271, 2452, 2562
Bse21I	CCTNAGG	1 cut(s)	2154
Bse3DI	GCAATG	2 cut(s)	115, 898
BseBI	CCWGG	6 cut(s)	29, 160, 374, 853, 1327, 2329
BseDI	CCNNGG	5 cut(s)	158, 359, 372, 1326, 1553
BseGI	GGATG	2 cut(s)	2476, 2674
BseLI	CCNNNNNNNGG	8 cut(s)	34, 448, 2060, 2183, 2303, 2423, 2552, 2639
BseMI	GCAATG	2 cut(s)	115, 898
BseMII	CTCAG	4 cut(s)	236, 1036, 2568, 2676
BseNI	ACTGG	9 cut(s)	1077, 1386, 1908, 2028, 2092, 2151, 2271, 2452, 2562
BseRI	GAGGAG	4 cut(s)	125, 128, 262, 1583
BseSI	GKGCMC	1 cut(s)	1165
BseXI	GCAGC	4 cut(s)	228, 582, 627, 2419
Bsh1236I	CGCG	4 cut(s)	302, 827, 1145, 1771
BshFI	GGCC	6 cut(s)	47, 1154, 1802, 2053, 2296, 2416
BshNI	GGYRCC	1 cut(s)	2231
BsiHKAI	GWGCWC	3 cut(s)	1165, 1254, 2223
BsiHKCI	CYCGRG	3 cut(s)	358, 905, 1552
BsiWI	CGTACG	1 cut(s)	70
BslFI	GGGAC	6 cut(s)	141, 911, 1861, 1981, 2224, 2464
BslI	CCNNNNNNNGG	8 cut(s)	34, 448, 2060, 2183, 2303, 2423, 2552, 2639
BsmAI	GTCTC	4 cut(s)	1389, 1775, 2105, 2573
BsmBI	CGTCTC	1 cut(s)	1775
BsmFI	GGGAC	6 cut(s)	141, 911, 1861, 1981, 2224, 2464
BsmI	GAATGC	1 cut(s)	150
BsnI	GGCC	6 cut(s)	47, 1154, 1802, 2053, 2296, 2416
Bso31I	GGTCTC	1 cut(s)	2105
BsoBI	CYCGRG	3 cut(s)	358, 905, 1552
Bsp1286I	GDGCHC	4 cut(s)	528, 1165, 1254, 2223
Bsp1407I	TGTACA	1 cut(s)	1225
Bsp143I	GATC	4 cut(s)	685, 1083, 1451, 2548
BspACI	CCGC	8 cut(s)	20, 48, 64, 123, 148, 1769, 1824, 2297
BspANI	GGCC	6 cut(s)	47, 1154, 1802, 2053, 2296, 2416
BspCNI	CTCAG	4 cut(s)	237, 1035, 2569, 2675
BspFNI	CGCG	4 cut(s)	302, 827, 1145, 1771
BspLI	GGNNCC	6 cut(s)	46, 1908, 2028, 2151, 2233, 2391
BspMAI	CTGCAG	3 cut(s)	716, 1338, 2523
BspMI	ACCTGC	2 cut(s)	1357, 2526
BspPI	GGATC	1 cut(s)	1459
BspQI	GCTCTTC	2 cut(s)	474, 2607
BspT107I	GGYRCC	1 cut(s)	2231
BspTI	CTTAAG	1 cut(s)	1609
BspTNI	GGTCTC	1 cut(s)	2105
BsrDI	GCAATG	2 cut(s)	115, 898
BsrFI	RCCGGY	3 cut(s)	104, 119, 2617
BsrGI	TGTACA	1 cut(s)	1225
BsrI	ACTGG	9 cut(s)	1077, 1386, 1908, 2028, 2092, 2151, 2271, 2452, 2562
BssAI	RCCGGY	3 cut(s)	104, 119, 2617
BssECI	CCNNGG	5 cut(s)	158, 359, 372, 1326, 1553
BssMI	GATC	4 cut(s)	685, 1083, 1451, 2548
BssNI	GRCGYC	1 cut(s)	1784
BssSI	CACGAG	1 cut(s)	1478
Bst2BI	CACGAG	1 cut(s)	1478
Bst2UI	CCWGG	6 cut(s)	29, 160, 374, 853, 1327, 2329
Bst4CI	ACNGT	3 cut(s)	70, 91, 187
Bst6I	CTCTTC	3 cut(s)	474, 2520, 2607
BstACI	GRCGYC	1 cut(s)	1784
BstAFI	CTTAAG	1 cut(s)	1609
BstAPI	GCANNNNNTGC	1 cut(s)	689
BstAUI	TGTACA	1 cut(s)	1225
BstBAI	YACGTR	2 cut(s)	385, 1302
BstC8I	GCNNGC	6 cut(s)	106, 121, 712, 1165, 1210, 2619
BstF5I	GGATG	2 cut(s)	2476, 2674
BstFNI	CGCG	4 cut(s)	302, 827, 1145, 1771
BstHHI	GCGC	2 cut(s)	829, 987
BstKTI	GATC	4 cut(s)	688, 1086, 1454, 2551
BstMAI	GTCTC	4 cut(s)	1389, 1775, 2105, 2573
BstMBI	GATC	4 cut(s)	685, 1083, 1451, 2548
BstNI	CCWGG	6 cut(s)	29, 160, 374, 853, 1327, 2329
BstSFI	CTRYAG	4 cut(s)	712, 1334, 2519, 2627
BstSLI	GKGCMC	1 cut(s)	1165
BstSNI	TACGTA	1 cut(s)	385
BstUI	CGCG	4 cut(s)	302, 827, 1145, 1771
BstV1I	GCAGC	4 cut(s)	228, 582, 627, 2419
BstX2I	RGATCY	1 cut(s)	685
BstYI	RGATCY	1 cut(s)	685
Bsu36I	CCTNAGG	1 cut(s)	2154
BsuI	GTATCC	3 cut(s)	1615, 1981, 2344
BsuRI	GGCC	6 cut(s)	47, 1154, 1802, 2053, 2296, 2416
BtgZI	GCGATG	1 cut(s)	2304
BtsCI	GGATG	2 cut(s)	2476, 2674
BtsI	GCAGTG	1 cut(s)	39
BtsIMutI	CAGTG	9 cut(s)	39, 1901, 2021, 2085, 2144, 2264, 2445, 2574, 2670
BveI	ACCTGC	2 cut(s)	1357, 2526
Cac8I	GCNNGC	6 cut(s)	106, 121, 712, 1165, 1210, 2619
CaiI	CAGNNNCTG	1 cut(s)	244
CfoI	GCGC	2 cut(s)	829, 987
Cfr10I	RCCGGY	3 cut(s)	104, 119, 2617
CseI	GACGC	2 cut(s)	833, 1792
Csp6I	GTAC	8 cut(s)	71, 551, 575, 601, 617, 1226, 1345, 2232
CspCI	CAANNNNNGTGG	2 cut(s)	457, 492
CviAII	CATG	5 cut(s)	457, 1272, 1585, 1627, 1865
CviQI	GTAC	8 cut(s)	71, 551, 575, 601, 617, 1226, 1345, 2232
DpnI	GATC	4 cut(s)	687, 1085, 1453, 2550
DpnII	GATC	4 cut(s)	685, 1083, 1451, 2548
DraI	TTTAAA	2 cut(s)	819, 1716
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
Eam1104I	CTCTTC	3 cut(s)	474, 2520, 2607
EarI	CTCTTC	3 cut(s)	474, 2520, 2607
EciI	GGCGGA	1 cut(s)	138
Ecl136II	GAGCTC	2 cut(s)	1252, 2221
Eco105I	TACGTA	1 cut(s)	385
Eco24I	GRGCYC	3 cut(s)	528, 1254, 2223
Eco31I	GGTCTC	1 cut(s)	2105
Eco47I	GGWCC	5 cut(s)	1906, 2026, 2149, 2174, 2389
Eco53kI	GAGCTC	2 cut(s)	1252, 2221
Eco57I	CTGAAG	3 cut(s)	342, 726, 1779
Eco81I	CCTNAGG	1 cut(s)	2154
Eco88I	CYCGRG	3 cut(s)	358, 905, 1552
EcoICRI	GAGCTC	2 cut(s)	1252, 2221
EcoRII	CCWGG	6 cut(s)	27, 158, 372, 851, 1325, 2327
EcoT22I	ATGCAT	1 cut(s)	915
EcoT38I	GRGCYC	3 cut(s)	528, 1254, 2223
Esp3I	CGTCTC	1 cut(s)	1775
FaeI	CATG	5 cut(s)	460, 1275, 1588, 1630, 1868
FalI	AAGNNNNNCTT	6 cut(s)	315, 347, 813, 845, 1430, 1462
FaqI	GGGAC	6 cut(s)	141, 911, 1861, 1981, 2224, 2464
FatI	CATG	5 cut(s)	456, 1271, 1584, 1626, 1864
FauI	CCCGC	1 cut(s)	71
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	6 cut(s)	48, 242, 571, 641, 2297, 2433
FokI	GGATG	2 cut(s)	2483, 2681
FriOI	GRGCYC	3 cut(s)	528, 1254, 2223
Fsp4HI	GCNGC	6 cut(s)	48, 242, 571, 641, 2297, 2433
FspBI	CTAG	9 cut(s)	129, 1791, 1928, 2048, 2171, 2291, 2513, 2540, 2721
GlaI	GCGC	2 cut(s)	828, 986
GluI	GCNGC	6 cut(s)	48, 242, 571, 641, 2297, 2433
GsuI	CTGGAG	9 cut(s)	420, 470, 1403, 1836, 1956, 2199, 2319, 2439, 2568
HaeIII	GGCC	6 cut(s)	47, 1154, 1802, 2053, 2296, 2416
HgaI	GACGC	2 cut(s)	833, 1792
HhaI	GCGC	2 cut(s)	829, 987
Hin1I	GRCGYC	1 cut(s)	1784
Hin1II	CATG	5 cut(s)	460, 1275, 1588, 1630, 1868
Hin6I	GCGC	2 cut(s)	827, 985
HinP1I	GCGC	2 cut(s)	827, 985
HindIII	AAGCTT	1 cut(s)	1761
HphI	GGTGA	5 cut(s)	34, 52, 894, 1147, 1758
Hpy166II	GTNNAC	8 cut(s)	25, 288, 388, 1163, 1228, 1347, 1582, 1962
Hpy188I	TCNGA	8 cut(s)	322, 340, 394, 949, 994, 1088, 1218, 1602
Hpy8I	GTNNAC	8 cut(s)	25, 288, 388, 1163, 1228, 1347, 1582, 1962
Hpy99I	CGWCG	2 cut(s)	95, 119
HpyAV	CCTTC	7 cut(s)	761, 1060, 1144, 1178, 1649, 1675, 2011
HpyCH4III	ACNGT	3 cut(s)	70, 91, 187
HpyCH4IV	ACGT	2 cut(s)	384, 1301
HpySE526I	ACGT	2 cut(s)	384, 1301
Hsp92I	GRCGYC	1 cut(s)	1784
Hsp92II	CATG	5 cut(s)	460, 1275, 1588, 1630, 1868
HspAI	GCGC	2 cut(s)	827, 985
KpnI	GGTACC	1 cut(s)	2235
KroI	GCCGGC	3 cut(s)	104, 119, 2617
KroNI	GCCGGC	3 cut(s)	106, 121, 2619
Kzo9I	GATC	4 cut(s)	685, 1083, 1451, 2548
LguI	GCTCTTC	2 cut(s)	474, 2607
LmnI	GCTCC	2 cut(s)	125, 1505
Lsp1109I	GCAGC	4 cut(s)	228, 582, 627, 2419
LweI	GCATC	7 cut(s)	385, 691, 790, 900, 1476, 1690, 1858
MaeI	CTAG	9 cut(s)	129, 1791, 1928, 2048, 2171, 2291, 2513, 2540, 2721
MaeII	ACGT	2 cut(s)	384, 1301
MaeIII	GTNAC	1 cut(s)	867
MalI	GATC	4 cut(s)	687, 1085, 1453, 2550
MboI	GATC	4 cut(s)	685, 1083, 1451, 2548
MfeI	CAATTG	2 cut(s)	588, 660
MflI	RGATCY	1 cut(s)	685
MhlI	GDGCHC	4 cut(s)	528, 1165, 1254, 2223
MmeI	TCCRAC	2 cut(s)	837, 1444
Mph1103I	ATGCAT	1 cut(s)	915
MreI	CGCCGGCG	1 cut(s)	119
MroNI	GCCGGC	3 cut(s)	104, 119, 2617
MroXI	GAANNNNTTC	2 cut(s)	234, 316
MseI	TTAA	6 cut(s)	177, 333, 818, 1610, 1715, 2592
MspA1I	CMGCKG	1 cut(s)	241
MspCI	CTTAAG	1 cut(s)	1609
MunI	CAATTG	2 cut(s)	588, 660
Mva1269I	GAATGC	1 cut(s)	150
MvaI	CCWGG	6 cut(s)	29, 160, 374, 853, 1327, 2329
MvnI	CGCG	4 cut(s)	302, 827, 1145, 1771
NaeI	GCCGGC	3 cut(s)	106, 121, 2619
NciI	CCSGG	4 cut(s)	1518, 1846, 1966, 2209
NdeII	GATC	4 cut(s)	685, 1083, 1451, 2548
NgoMIV	GCCGGC	3 cut(s)	104, 119, 2617
NlaIII	CATG	5 cut(s)	460, 1275, 1588, 1630, 1868
NlaIV	GGNNCC	6 cut(s)	46, 1908, 2028, 2151, 2233, 2391
NsiI	ATGCAT	1 cut(s)	915
PciSI	GCTCTTC	2 cut(s)	474, 2607
PctI	GAATGC	1 cut(s)	150
PdiI	GCCGGC	3 cut(s)	106, 121, 2619
PdmI	GAANNNNTTC	2 cut(s)	234, 316
PfeI	GAWTC	6 cut(s)	472, 950, 1219, 1268, 1730, 2162
Pfl23II	CGTACG	1 cut(s)	70
PflFI	GACNNNGTC	1 cut(s)	89
PflMI	CCANNNNNTGG	2 cut(s)	448, 2639
PkrI	GCNGC	6 cut(s)	49, 243, 572, 642, 2298, 2434
Ppu21I	YACGTR	2 cut(s)	385, 1302
Psp124BI	GAGCTC	2 cut(s)	1254, 2223
Psp6I	CCWGG	6 cut(s)	27, 158, 372, 851, 1325, 2327
PspGI	CCWGG	6 cut(s)	27, 158, 372, 851, 1325, 2327
PspLI	CGTACG	1 cut(s)	70
PspN4I	GGNNCC	6 cut(s)	46, 1908, 2028, 2151, 2233, 2391
PsrI	GAACNNNNNNTAC	2 cut(s)	219, 251
PstI	CTGCAG	3 cut(s)	716, 1338, 2523
PstNI	CAGNNNCTG	1 cut(s)	244
PsuI	RGATCY	1 cut(s)	685
PsyI	GACNNNGTC	1 cut(s)	89
PvuII	CAGCTG	1 cut(s)	241
RsaI	GTAC	8 cut(s)	72, 552, 576, 602, 618, 1227, 1346, 2233
RsaNI	GTAC	8 cut(s)	71, 551, 575, 601, 617, 1226, 1345, 2232
SacI	GAGCTC	2 cut(s)	1254, 2223
SapI	GCTCTTC	2 cut(s)	474, 2607
SaqAI	TTAA	6 cut(s)	177, 333, 818, 1610, 1715, 2592
SatI	GCNGC	6 cut(s)	48, 242, 571, 641, 2297, 2433
Sau3AI	GATC	4 cut(s)	685, 1083, 1451, 2548
SbfI	CCTGCAGG	1 cut(s)	2523
ScaI	AGTACT	1 cut(s)	618
SdaI	CCTGCAGG	1 cut(s)	2523
SduI	GDGCHC	4 cut(s)	528, 1165, 1254, 2223
SfaNI	GCATC	7 cut(s)	385, 691, 790, 900, 1476, 1690, 1858
SfcI	CTRYAG	4 cut(s)	712, 1334, 2519, 2627
SgrAI	CRCCGGYG	1 cut(s)	119
SinI	GGWCC	5 cut(s)	1906, 2026, 2149, 2174, 2389
SmiI	ATTTAAAT	1 cut(s)	1716
SmlI	CTYRAG	5 cut(s)	1094, 1495, 1565, 1609, 2102
SmoI	CTYRAG	5 cut(s)	1094, 1495, 1565, 1609, 2102
SnaBI	TACGTA	1 cut(s)	385
Sse8387I	CCTGCAGG	1 cut(s)	2523
SsiI	CCGC	8 cut(s)	20, 48, 64, 123, 148, 1769, 1824, 2297
SspI	AATATT	2 cut(s)	942, 1749
SspMI	CTAG	9 cut(s)	129, 1791, 1928, 2048, 2171, 2291, 2513, 2540, 2721
SstI	GAGCTC	2 cut(s)	1254, 2223
SwaI	ATTTAAAT	1 cut(s)	1716
TaaI	ACNGT	3 cut(s)	70, 91, 187
TaiI	ACGT	2 cut(s)	387, 1304
TaqI	TCGA	1 cut(s)	276
TatI	WGTACW	3 cut(s)	550, 616, 1225
TauI	GCSGC	2 cut(s)	50, 2299
TfiI	GAWTC	6 cut(s)	472, 950, 1219, 1268, 1730, 2162
Tru1I	TTAA	6 cut(s)	177, 333, 818, 1610, 1715, 2592
Tru9I	TTAA	6 cut(s)	177, 333, 818, 1610, 1715, 2592
TscAI	CASTG	9 cut(s)	39, 1908, 2028, 2092, 2151, 2271, 2452, 2581, 2670
TseI	GCWGC	4 cut(s)	241, 570, 640, 2432
TspGWI	ACGGA	1 cut(s)	324
TspRI	CASTG	9 cut(s)	39, 1908, 2028, 2092, 2151, 2271, 2452, 2581, 2670
Tth111I	GACNNNGTC	1 cut(s)	89
Van91I	CCANNNNNTGG	2 cut(s)	448, 2639
Vha464I	CTTAAG	1 cut(s)	1609
VneI	GTGCAC	1 cut(s)	1161
VpaK11BI	GGWCC	5 cut(s)	1906, 2026, 2149, 2174, 2389
XapI	RAATTY	7 cut(s)	163, 580, 814, 837, 1408, 1711, 1724
XmiI	GTMKAC	1 cut(s)	387
XmnI	GAANNNNTTC	2 cut(s)	234, 316
XspI	CTAG	9 cut(s)	129, 1791, 1928, 2048, 2171, 2291, 2513, 2540, 2721
ZrmI	AGTACT	1 cut(s)	618
Zsp2I	ATGCAT	1 cut(s)	915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.