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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37370 AT2G37370 AT2G37370 AT2G37370 |
| fragaria_vesca | FvH4_6g14710 |
| malus_domestica | MD04G1116900.v1.1 MD04G1117000.v1.1 MD12G1132600.v1.1 |
| prunus_persica | Prupe.6G246700_v2.0.a1 Prupe.6G246700_v2.0.a1 |
| pyrus_communis | pycom04g10680 pycom12g12840 |
| rosa_chinensis | RchiOBHm_Chr3g0467931 |
| rosa_laevigata | RLG00000024467 |
| rosa_multiflora | Rmu_sc0001793.1_g000053 |
| rosa_roxburghii | Rroxscaffold_6G00413300 |
| rosa_rugosa | Rorug03G0090600 |
| rosa_samantha | Rh3AG139000 Rh3BG160600 Rh3CG160500 Rh3DG161100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 92 |
| Acc36I | ACCTGC | 1 cut(s) | 1330 |
| AccBSI | CCGCTC | 1 cut(s) | 2675 |
| AccI | GTMKAC | 1 cut(s) | 1029 |
| AciI | CCGC | 4 cut(s) | 20, 2673, 2718, 2772 |
| AclWI | GGATC | 2 cut(s) | 1227, 1808 |
| AcoI | YGGCCR | 3 cut(s) | 30, 1642, 1914 |
| AcsI | RAATTY | 7 cut(s) | 124, 271, 535, 769, 792, 1381, 1691 |
| AcuI | CTGAAG | 3 cut(s) | 297, 681, 1121 |
| AcyI | GRCGYC | 1 cut(s) | 1138 |
| AfaI | GTAC | 6 cut(s) | 507, 531, 573, 1200, 1319, 2256 |
| AfeI | AGCGCT | 1 cut(s) | 46 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 63, 120, 183, 719 |
| AhlI | ACTAGT | 1 cut(s) | 1829 |
| AjnI | CCWGG | 5 cut(s) | 327, 806, 1298, 1308, 1927 |
| Alw21I | GWGCWC | 1 cut(s) | 1662 |
| Alw26I | GTCTC | 2 cut(s) | 737, 822 |
| AlwI | GGATC | 2 cut(s) | 1227, 1808 |
| Aor51HI | AGCGCT | 1 cut(s) | 46 |
| AoxI | GGCC | 4 cut(s) | 30, 1642, 1766, 1914 |
| ApoI | RAATTY | 7 cut(s) | 124, 271, 535, 769, 792, 1381, 1691 |
| AspLEI | GCGC | 3 cut(s) | 47, 226, 942 |
| AspS9I | GGNCC | 3 cut(s) | 66, 949, 2825 |
| AsuC2I | CCSGG | 1 cut(s) | 64 |
| AvaII | GGWCC | 3 cut(s) | 66, 949, 2825 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1287, 1320 |
| BalI | TGGCCA | 2 cut(s) | 1644, 1916 |
| BanII | GRGCYC | 2 cut(s) | 483, 1662 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 444, 476, 1380, 1412 |
| BbsI | GAAGAC | 1 cut(s) | 1860 |
| Bbv12I | GWGCWC | 1 cut(s) | 1662 |
| BccI | CCATC | 6 cut(s) | 691, 1042, 1401, 1439, 1634, 1762 |
| BceAI | ACGGC | 2 cut(s) | 17, 236 |
| BciT130I | CCWGG | 5 cut(s) | 329, 808, 1300, 1310, 1929 |
| BciVI | GTATCC | 1 cut(s) | 1870 |
| BcnI | CCSGG | 1 cut(s) | 64 |
| BcoDI | GTCTC | 2 cut(s) | 737, 822 |
| BcuI | ACTAGT | 1 cut(s) | 1829 |
| BfaI | CTAG | 3 cut(s) | 1758, 1785, 1830 |
| BfmI | CTRYAG | 3 cut(s) | 178, 667, 704 |
| BfoI | RGCGCY | 1 cut(s) | 48 |
| BfuAI | ACCTGC | 1 cut(s) | 1330 |
| BfuI | GTATCC | 1 cut(s) | 1870 |
| BmcAI | AGTACT | 1 cut(s) | 573 |
| Bme1390I | CCNGG | 6 cut(s) | 64, 329, 808, 1300, 1310, 1929 |
| Bme18I | GGWCC | 3 cut(s) | 66, 949, 2825 |
| BmgT120I | GGNCC | 3 cut(s) | 66, 949, 2825 |
| BmrFI | CCNGG | 6 cut(s) | 64, 329, 808, 1300, 1310, 1929 |
| BmsI | GCATC | 6 cut(s) | 646, 745, 1322, 1843, 2056, 2689 |
| BpiI | GAAGAC | 1 cut(s) | 1860 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1071, 1103 |
| BpmI | CTGGAG | 3 cut(s) | 1292, 1376, 2715 |
| Bpu10I | CCTNAGC | 2 cut(s) | 861, 2859 |
| BpuEI | CTTGAG | 3 cut(s) | 1037, 1597, 1658 |
| BpuMI | CCSGG | 1 cut(s) | 64 |
| BsaAI | YACGTR | 1 cut(s) | 1407 |
| BsaHI | GRCGYC | 1 cut(s) | 1138 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 63, 120, 183, 719 |
| Bse118I | RCCGGY | 1 cut(s) | 113 |
| Bse1I | ACTGG | 2 cut(s) | 1359, 2827 |
| Bse3DI | GCAATG | 2 cut(s) | 115, 2544 |
| BseBI | CCWGG | 5 cut(s) | 329, 808, 1300, 1310, 1929 |
| BseGI | GGATG | 3 cut(s) | 1427, 1555, 1924 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 63, 120, 183, 719 |
| BseMI | GCAATG | 2 cut(s) | 115, 2544 |
| BseMII | CTCAG | 3 cut(s) | 435, 852, 2264 |
| BseNI | ACTGG | 2 cut(s) | 1359, 2827 |
| BseRI | GAGGAG | 3 cut(s) | 1346, 1898, 2157 |
| BsgI | GTGCAG | 1 cut(s) | 851 |
| BshFI | GGCC | 4 cut(s) | 32, 1644, 1768, 1916 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1662 |
| BsiSI | CCGG | 4 cut(s) | 64, 114, 2351, 2555 |
| BslFI | GGGAC | 1 cut(s) | 866 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 63, 120, 183, 719 |
| BsmAI | GTCTC | 2 cut(s) | 737, 822 |
| BsmFI | GGGAC | 1 cut(s) | 866 |
| BsmI | GAATGC | 1 cut(s) | 1129 |
| BsnI | GGCC | 4 cut(s) | 32, 1644, 1768, 1916 |
| Bsp1286I | GDGCHC | 2 cut(s) | 483, 1662 |
| Bsp1407I | TGTACA | 2 cut(s) | 529, 1198 |
| Bsp143I | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| BspACI | CCGC | 4 cut(s) | 20, 2673, 2718, 2772 |
| BspANI | GGCC | 4 cut(s) | 32, 1644, 1768, 1916 |
| BspCNI | CTCAG | 3 cut(s) | 436, 853, 2263 |
| BspMAI | CTGCAG | 1 cut(s) | 708 |
| BspMI | ACCTGC | 1 cut(s) | 1330 |
| BspPI | GGATC | 2 cut(s) | 1227, 1808 |
| BspQI | GCTCTTC | 1 cut(s) | 1134 |
| BsrBI | CCGCTC | 1 cut(s) | 2675 |
| BsrDI | GCAATG | 2 cut(s) | 115, 2544 |
| BsrFI | RCCGGY | 1 cut(s) | 113 |
| BsrGI | TGTACA | 2 cut(s) | 529, 1198 |
| BsrI | ACTGG | 2 cut(s) | 1359, 2827 |
| BssAI | RCCGGY | 1 cut(s) | 113 |
| BssMI | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| BssNI | GRCGYC | 1 cut(s) | 1138 |
| BssT1I | CCWWGG | 7 cut(s) | 1520, 2229, 2478, 2505, 2532, 2682, 2709 |
| Bst2UI | CCWGG | 5 cut(s) | 329, 808, 1300, 1310, 1929 |
| Bst4CI | ACNGT | 4 cut(s) | 70, 148, 763, 2137 |
| Bst6I | CTCTTC | 3 cut(s) | 1134, 1530, 1959 |
| BstACI | GRCGYC | 1 cut(s) | 1138 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 110, 755, 1058 |
| BstAUI | TGTACA | 2 cut(s) | 529, 1198 |
| BstBAI | YACGTR | 1 cut(s) | 1407 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 49, 106, 1421 |
| BstDEI | CTNAG | 4 cut(s) | 444, 861, 2250, 2859 |
| BstDSI | CCRYGG | 2 cut(s) | 33, 1736 |
| BstF5I | GGATG | 3 cut(s) | 1427, 1555, 1924 |
| BstH2I | RGCGCY | 1 cut(s) | 48 |
| BstHHI | GCGC | 3 cut(s) | 47, 226, 942 |
| BstKTI | GATC | 4 cut(s) | 283, 643, 1235, 1816 |
| BstMAI | GTCTC | 2 cut(s) | 737, 822 |
| BstMBI | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| BstNI | CCWGG | 5 cut(s) | 329, 808, 1300, 1310, 1929 |
| BstSCI | CCNGG | 6 cut(s) | 62, 327, 806, 1298, 1308, 1927 |
| BstSFI | CTRYAG | 3 cut(s) | 178, 667, 704 |
| BstSNI | TACGTA | 1 cut(s) | 1407 |
| BstV2I | GAAGAC | 1 cut(s) | 1860 |
| BstX2I | RGATCY | 1 cut(s) | 1813 |
| BstYI | RGATCY | 1 cut(s) | 1813 |
| BsuI | GTATCC | 1 cut(s) | 1870 |
| BsuRI | GGCC | 4 cut(s) | 32, 1644, 1768, 1916 |
| BtgI | CCRYGG | 2 cut(s) | 33, 1736 |
| BtsCI | GGATG | 3 cut(s) | 1427, 1555, 1924 |
| BveI | ACCTGC | 1 cut(s) | 1330 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 49, 106, 1421 |
| CfoI | GCGC | 3 cut(s) | 47, 226, 942 |
| Cfr10I | RCCGGY | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 3 cut(s) | 66, 949, 2825 |
| CpoI | CGGWCCG | 1 cut(s) | 66 |
| CseI | GACGC | 1 cut(s) | 1146 |
| Csp6I | GTAC | 6 cut(s) | 506, 530, 572, 1199, 1318, 2255 |
| CspI | CGGWCCG | 1 cut(s) | 66 |
| CviAII | CATG | 5 cut(s) | 412, 424, 509, 1245, 1594 |
| CviQI | GTAC | 6 cut(s) | 506, 530, 572, 1199, 1318, 2255 |
| DdeI | CTNAG | 4 cut(s) | 444, 861, 2250, 2859 |
| DpnI | GATC | 4 cut(s) | 282, 642, 1234, 1815 |
| DpnII | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| DraI | TTTAAA | 2 cut(s) | 774, 2176 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 92 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 92 |
| EaeI | YGGCCR | 3 cut(s) | 30, 1642, 1914 |
| Eam1104I | CTCTTC | 3 cut(s) | 1134, 1530, 1959 |
| EarI | CTCTTC | 3 cut(s) | 1134, 1530, 1959 |
| Ecl136II | GAGCTC | 1 cut(s) | 1660 |
| Eco105I | TACGTA | 1 cut(s) | 1407 |
| Eco130I | CCWWGG | 7 cut(s) | 1520, 2229, 2478, 2505, 2532, 2682, 2709 |
| Eco147I | AGGCCT | 1 cut(s) | 1768 |
| Eco24I | GRGCYC | 2 cut(s) | 483, 1662 |
| Eco47I | GGWCC | 3 cut(s) | 66, 949, 2825 |
| Eco47III | AGCGCT | 1 cut(s) | 46 |
| Eco53kI | GAGCTC | 1 cut(s) | 1660 |
| Eco57I | CTGAAG | 3 cut(s) | 297, 681, 1121 |
| EcoICRI | GAGCTC | 1 cut(s) | 1660 |
| EcoRI | GAATTC | 1 cut(s) | 271 |
| EcoRII | CCWGG | 5 cut(s) | 327, 806, 1298, 1308, 1927 |
| EcoT14I | CCWWGG | 7 cut(s) | 1520, 2229, 2478, 2505, 2532, 2682, 2709 |
| EcoT38I | GRGCYC | 2 cut(s) | 483, 1662 |
| ErhI | CCWWGG | 7 cut(s) | 1520, 2229, 2478, 2505, 2532, 2682, 2709 |
| FaeI | CATG | 5 cut(s) | 415, 427, 512, 1248, 1597 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 270, 302, 824, 856, 960, 992, 1403, 1435 |
| FaqI | GGGAC | 1 cut(s) | 866 |
| FatI | CATG | 5 cut(s) | 411, 423, 508, 1244, 1593 |
| FblI | GTMKAC | 1 cut(s) | 1029 |
| FokI | GGATG | 3 cut(s) | 1414, 1562, 1911 |
| FriOI | GRGCYC | 2 cut(s) | 483, 1662 |
| FspBI | CTAG | 3 cut(s) | 1758, 1785, 1830 |
| GlaI | GCGC | 3 cut(s) | 46, 225, 941 |
| GsuI | CTGGAG | 3 cut(s) | 1292, 1376, 2715 |
| HaeII | RGCGCY | 1 cut(s) | 48 |
| HaeIII | GGCC | 4 cut(s) | 32, 1644, 1768, 1916 |
| HapII | CCGG | 4 cut(s) | 64, 114, 2351, 2555 |
| HgaI | GACGC | 1 cut(s) | 1146 |
| HhaI | GCGC | 3 cut(s) | 47, 226, 942 |
| Hin1I | GRCGYC | 1 cut(s) | 1138 |
| Hin1II | CATG | 5 cut(s) | 415, 427, 512, 1248, 1597 |
| Hin6I | GCGC | 3 cut(s) | 45, 224, 940 |
| HinP1I | GCGC | 3 cut(s) | 45, 224, 940 |
| HincII | GTYRAC | 2 cut(s) | 343, 1030 |
| HindII | GTYRAC | 2 cut(s) | 343, 1030 |
| HindIII | AAGCTT | 2 cut(s) | 1417, 1728 |
| HpaII | CCGG | 4 cut(s) | 64, 114, 2351, 2555 |
| Hpy188I | TCNGA | 8 cut(s) | 277, 295, 349, 742, 904, 963, 1191, 1942 |
| Hpy188III | TCNNGA | 7 cut(s) | 377, 404, 431, 1040, 1230, 1289, 1675 |
| Hpy99I | CGWCG | 2 cut(s) | 95, 1031 |
| HpyCH4III | ACNGT | 4 cut(s) | 70, 148, 763, 2137 |
| HpyCH4IV | ACGT | 3 cut(s) | 339, 1026, 1406 |
| HpyCH4V | TGCA | 8 cut(s) | 614, 706, 758, 868, 1061, 1775, 1856, 2069 |
| HpyF3I | CTNAG | 4 cut(s) | 444, 861, 2250, 2859 |
| HpySE526I | ACGT | 3 cut(s) | 339, 1026, 1406 |
| Hsp92I | GRCGYC | 1 cut(s) | 1138 |
| Hsp92II | CATG | 5 cut(s) | 415, 427, 512, 1248, 1597 |
| HspAI | GCGC | 3 cut(s) | 45, 224, 940 |
| Kzo9I | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| LguI | GCTCTTC | 1 cut(s) | 1134 |
| LweI | GCATC | 6 cut(s) | 646, 745, 1322, 1843, 2056, 2689 |
| MaeI | CTAG | 3 cut(s) | 1758, 1785, 1830 |
| MaeII | ACGT | 3 cut(s) | 339, 1026, 1406 |
| MaeIII | GTNAC | 6 cut(s) | 74, 728, 822, 1227, 1920, 2638 |
| MalI | GATC | 4 cut(s) | 282, 642, 1234, 1815 |
| MbiI | CCGCTC | 1 cut(s) | 2675 |
| MboI | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| MfeI | CAATTG | 1 cut(s) | 599 |
| MflI | RGATCY | 1 cut(s) | 1813 |
| MhlI | GDGCHC | 2 cut(s) | 483, 1662 |
| MlsI | TGGCCA | 2 cut(s) | 1644, 1916 |
| MluNI | TGGCCA | 2 cut(s) | 1644, 1916 |
| MlyI | GAGTC | 4 cut(s) | 80, 338, 824, 848 |
| MmeI | TCCRAC | 1 cut(s) | 792 |
| Mox20I | TGGCCA | 2 cut(s) | 1644, 1916 |
| MscI | TGGCCA | 2 cut(s) | 1644, 1916 |
| MseI | TTAA | 9 cut(s) | 228, 627, 716, 773, 978, 1205, 1497, 1683, 2175 |
| Msp20I | TGGCCA | 2 cut(s) | 1644, 1916 |
| MspI | CCGG | 4 cut(s) | 64, 114, 2351, 2555 |
| MspR9I | CCNGG | 6 cut(s) | 64, 329, 808, 1300, 1310, 1929 |
| MunI | CAATTG | 1 cut(s) | 599 |
| Mva1269I | GAATGC | 1 cut(s) | 1129 |
| MvaI | CCWGG | 5 cut(s) | 329, 808, 1300, 1310, 1929 |
| NciI | CCSGG | 1 cut(s) | 64 |
| NdeII | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| NlaIII | CATG | 5 cut(s) | 415, 427, 512, 1248, 1597 |
| NmuCI | GTSAC | 2 cut(s) | 1227, 2638 |
| PceI | AGGCCT | 1 cut(s) | 1768 |
| PciSI | GCTCTTC | 1 cut(s) | 1134 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PctI | GAATGC | 1 cut(s) | 1129 |
| PfeI | GAWTC | 7 cut(s) | 427, 905, 1241, 1447, 1697, 1799, 1937 |
| PflFI | GACNNNGTC | 2 cut(s) | 89, 418 |
| PfoI | TCCNGGA | 1 cut(s) | 1927 |
| PleI | GAGTC | 4 cut(s) | 80, 338, 823, 848 |
| PpsI | GAGTC | 4 cut(s) | 80, 338, 823, 848 |
| Ppu21I | YACGTR | 1 cut(s) | 1407 |
| Psp124BI | GAGCTC | 1 cut(s) | 1662 |
| Psp6I | CCWGG | 5 cut(s) | 327, 806, 1298, 1308, 1927 |
| PspGI | CCWGG | 5 cut(s) | 327, 806, 1298, 1308, 1927 |
| PspPI | GGNCC | 3 cut(s) | 66, 949, 2825 |
| PstI | CTGCAG | 1 cut(s) | 708 |
| PsuI | RGATCY | 1 cut(s) | 1813 |
| PsyI | GACNNNGTC | 2 cut(s) | 89, 418 |
| RsaI | GTAC | 6 cut(s) | 507, 531, 573, 1200, 1319, 2256 |
| RsaNI | GTAC | 6 cut(s) | 506, 530, 572, 1199, 1318, 2255 |
| Rsr2I | CGGWCCG | 1 cut(s) | 66 |
| RsrII | CGGWCCG | 1 cut(s) | 66 |
| SacI | GAGCTC | 1 cut(s) | 1662 |
| SalI | GTCGAC | 1 cut(s) | 1028 |
| SapI | GCTCTTC | 1 cut(s) | 1134 |
| SaqAI | TTAA | 9 cut(s) | 228, 627, 716, 773, 978, 1205, 1497, 1683, 2175 |
| Sau3AI | GATC | 4 cut(s) | 280, 640, 1232, 1813 |
| Sau96I | GGNCC | 3 cut(s) | 66, 949, 2825 |
| ScaI | AGTACT | 1 cut(s) | 573 |
| SchI | GAGTC | 4 cut(s) | 80, 338, 824, 848 |
| ScrFI | CCNGG | 6 cut(s) | 64, 329, 808, 1300, 1310, 1929 |
| SduI | GDGCHC | 2 cut(s) | 483, 1662 |
| SfaNI | GCATC | 6 cut(s) | 646, 745, 1322, 1843, 2056, 2689 |
| SfcI | CTRYAG | 3 cut(s) | 178, 667, 704 |
| SinI | GGWCC | 3 cut(s) | 66, 949, 2825 |
| SmlI | CTYRAG | 3 cut(s) | 1016, 1576, 1673 |
| SmoI | CTYRAG | 3 cut(s) | 1016, 1576, 1673 |
| SnaBI | TACGTA | 1 cut(s) | 1407 |
| SpeI | ACTAGT | 1 cut(s) | 1829 |
| SseBI | AGGCCT | 1 cut(s) | 1768 |
| SsiI | CCGC | 4 cut(s) | 20, 2673, 2718, 2772 |
| SspI | AATATT | 2 cut(s) | 1531, 1544 |
| SspMI | CTAG | 3 cut(s) | 1758, 1785, 1830 |
| SstI | GAGCTC | 1 cut(s) | 1662 |
| StuI | AGGCCT | 1 cut(s) | 1768 |
| StyD4I | CCNGG | 6 cut(s) | 62, 327, 806, 1298, 1308, 1927 |
| StyI | CCWWGG | 7 cut(s) | 1520, 2229, 2478, 2505, 2532, 2682, 2709 |
| TaaI | ACNGT | 4 cut(s) | 70, 148, 763, 2137 |
| TaiI | ACGT | 3 cut(s) | 342, 1029, 1409 |
| TaqI | TCGA | 2 cut(s) | 882, 1029 |
| TatI | WGTACW | 4 cut(s) | 505, 529, 571, 1198 |
| TauI | GCSGC | 1 cut(s) | 2675 |
| TfiI | GAWTC | 7 cut(s) | 427, 905, 1241, 1447, 1697, 1799, 1937 |
| Tru1I | TTAA | 9 cut(s) | 228, 627, 716, 773, 978, 1205, 1497, 1683, 2175 |
| Tru9I | TTAA | 9 cut(s) | 228, 627, 716, 773, 978, 1205, 1497, 1683, 2175 |
| TseFI | GTSAC | 2 cut(s) | 1227, 2638 |
| Tsp45I | GTSAC | 2 cut(s) | 1227, 2638 |
| TspGWI | ACGGA | 4 cut(s) | 79, 295, 1753, 2345 |
| Tth111I | GACNNNGTC | 2 cut(s) | 89, 418 |
| VpaK11BI | GGWCC | 3 cut(s) | 66, 949, 2825 |
| XapI | RAATTY | 7 cut(s) | 124, 271, 535, 769, 792, 1381, 1691 |
| XmiI | GTMKAC | 1 cut(s) | 1029 |
| XspI | CTAG | 3 cut(s) | 1758, 1785, 1830 |
| ZrmI | AGTACT | 1 cut(s) | 573 |