FvH4_6g17880

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0007466
Physical Location & Seq
Forward (+)
11732389 .. 11740601
8213 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g17880.t1

Sequence Viewer

Length: 2538 bp
ATGGAAATGATAACAACAACAAGGAGATCGAACTACACGCTTCTGAGCCAGGTCCCCGACGATCAGTTCACGGCGACGTCGTTTTACGAGGCGGAGGGGAAGAACAATAATAACAACAACAACAACAAGGCCAAGGTGGACGGCAGAGGTTCTGATTGGGAGATGGGAGGAGGAGGAGAGTACCGGGCGGCGAATAATCCGCCGTCGAATCGGATCGGGAACGTGTTCTCGTCCGTCGGATTGCAGCGGCAGTCGAGCGGGAGCAGCTTCGGGGAGAGCTCGCTGTCCGGCGAGTACTACGCGCCGACTCTGTCGACCACGGCGGCGAATGAGATTGACGGATTCGGGTACGTGAACGACGGCGAGTTTAGAGGGAAGATAGGGATGGATGGGACGGTAGTGGGGCCTACCGGAGGGTCGTCGTTCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGCTGCAGTTGGCTTTGGCTCTGCGGCTCTCGTCGGAGGCCACTTGCGCCGATGATCCTAATTTCTTGGATCCAGTGCCGGATGAATCTTCGTCGAGGTTGTCCAGCTCTGCCGATGCCGTTTCGCATCGATTTTGGGTGAATGGCTGTCTGTCCTACTTTGACAAAGTGCCTGATGGGTTTTACCTTATTCATGGGATAGATTCGTATGTATGGTCTATGTGCACTGATATGCAGGAGAGTGGTCGTATACCATCAATTGAATCGTTAAGATCTGTTGATCCTGGTAATGGATCTTCTATAGAAGTGATCTTAATTGATCGACGTAGTGATCCCAGCTTAAAGGAACTTCAAAATAGGGTCCTCAGCATTTCTCATGCTTGCATAACCAAGACAGAGATTGTTGATCAGTTGGCAAAGCTTGTATGCAGCCGTATGGGGGGTTCAGCATCTGTTGGAGAGGCTGATTTTTTTCCTATATGGAGGGAGAGCAGTGATGAGCTAAAAGATTGCTTAGGATCAGTAGTTGTTCCAATAGGCAGCCTTTCTATTGGCCTCTGTAGACATCGTGCTTTATTATTCAAGGTGCTAGCTGACTCAATTGATCTACCGTGCCGAATTGCCAAAGGCTGTAAATATTGCACAAGAGATGATGCTTCCTCTTGTCTTGTTCGTTTTGGTGTTGACAGGGAGTTGTTCGTTGACTTGATTGGGAATCCAGGATGCTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCAACCATCTCAATTTCTTCACCGCTGCGCTTTCCAAGAATCAGAACAGTTGAACCTACCATTGATTTTAGGACACTGGCCAAACAGTATTTCTCGGACTGCCAGTTGCTTAATCTTGTATTCGATGAAGCTCCGGCAGGAAGTGCTGGCAATGAGGACAATAAGGGTTTCTCTATGTATCCTAAGCAGAAGTTTACAGATGGAAACAACCTTTTTCTGGATTCAAGTCTCGATGATGACACTTCTATGCATGTTGACGATCGGAGTCCCCAGTTGCTTAAATCATATAATCCTTCTCAGAACATTGTACACCAACAAACAATGTTAAAAGATCAAATCCCCCTAAAGCGTATACCACCTATAGGACATAGAGACATTTCAAGATTGGATACAAGTAGGGACTCGAGGTTCGGTGAGGGACTGCAAGTGGTTCCTAGTAAACCAAATAAAGAGTTGACCTTCGATGTGGATGATTTGGACATTCCGTGGAGTGAGCTTGCACTGAAAGAGAGAATTGGTGCAGGTTCTTTTGGAACTGTTCATCGTGCTGATTGGCATGGCTCTGATGTTGCTGTGAAGATTCTTATGGAGCAAGAATTTCATGCTGAACGCTTTAAAGAGTTCTTAAGGGAGGTTACAATAATGAAACGCCTGCGGCATCCAAATATTGTGCTTTTTATGGGTGCAGTTACAAAGCCCCCGAACTTGTCCATTGTCACAGAATATCTATCAAGAGGGAGCTTGTATAGGCTGTTGCATAAACCTGGCCCAGTGCTGGATGAGAGGCGCCGGTTGAATATGGCTCACGATGTGGCAAAGGGGATGAATTATCTTCATAGGAGGAATCCTCCCATTGTTCATCGAGATTTAAAATCTCCAAACCTTTTGGTTGACAAAAAATATACTGTGAAGGTTTGTGATTTTGGTCTTTCCCGTTTAAAGGCCAACACCTTTCTTTCATCAAAATCAGCTGCAGGGACTCCTGAATGGATGGCACCAGAAGTCCTGCGTGATGAACCATCAAATGAGAAGTCAGATGTTTACAGTTTTGGTGTAATATTGTGGGAACTTGCGACATTGCAACAGCCCTGGGGTAATTTGAATCCAGCGCAGGTTGTAGCAGCTGTTGGTTTTAAAAACAAAAGGCTTGAGATTCCACGTGATTTGAATCCTCAAGTGGCTTCTATAATTGAGGCATGCTGGGCCAATGAGCCCTGGAAACGACCTTCATTCGCTAGTATCATGGAGTCTTTGAAGCCATTGATTAAAGCTCCCACACCTCAACCTAGTCATGCAGACTTGCCAATACTCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

846

Amino Acids

93.61

Weight (kDa)

5.77

Isoelectric Point (pI)

44.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 192 - 398 3.4e-81 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 574 - 825 1.9e-70 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 575 - 823 1.9e-55 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
Acc36I ACCTGC 2 cut(s) 1733, 2323
AccB1I GGYRCC 2 cut(s) 2007, 2215
AccBSI CCGCTC 1 cut(s) 258
AccI GTMKAC 4 cut(s) 314, 712, 1024, 1573
AccII CGCG 1 cut(s) 302
AciI CCGC 9 cut(s) 92, 188, 200, 247, 258, 323, 487, 1244, 1876
AclWI GGATC 8 cut(s) 221, 512, 527, 540, 737, 763, 788, 988
AcoI YGGCCR 1 cut(s) 1299
AcsI RAATTY 1 cut(s) 1817
AcvI CACGTG 1 cut(s) 2381
AcyI GRCGYC 2 cut(s) 77, 2008
AdeI CACNNNGTG 1 cut(s) 2032
AfaI GTAC 4 cut(s) 182, 296, 350, 1530
AfiI CCNNNNNNNGG 7 cut(s) 413, 752, 901, 1438, 1583, 1996, 2161
AflII CTTAAG 1 cut(s) 1846
AflIII ACRYGT 1 cut(s) 222
AjnI CCWGG 6 cut(s) 48, 745, 1180, 1984, 2309, 2435
AjuI GAANNNNNNNTTGG 2 cut(s) 1295, 1327
AloI GAACNNNNNNTCC 2 cut(s) 1613, 1645
Alw21I GWGCWC 2 cut(s) 281, 689
Alw26I GTCTC 2 cut(s) 1454, 1587
Alw44I GTGCAC 1 cut(s) 685
AlwI GGATC 8 cut(s) 221, 512, 527, 540, 737, 763, 788, 988
AlwNI CAGNNNCTG 1 cut(s) 914
Ama87I CYCGRG 1 cut(s) 1624
AoxI GGCC 8 cut(s) 129, 404, 501, 1015, 1299, 1987, 2163, 2424
ApaLI GTGCAC 1 cut(s) 685
ApeKI GCWGC 9 cut(s) 244, 264, 442, 466, 891, 1002, 1246, 2192, 2342
ApoI RAATTY 1 cut(s) 1817
ArsI GACNNNNNNTTYG 4 cut(s) 1613, 1645, 2237, 2269
Asp700I GAANNNNTTC 1 cut(s) 224
AspLEI GCGC 6 cut(s) 304, 442, 512, 1251, 2010, 2332
AspS9I GGNCC 6 cut(s) 52, 404, 823, 1217, 1988, 2424
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 4 cut(s) 613, 1233, 1646, 2524
AsuNHI GCTAGC 1 cut(s) 1051
AvaI CYCGRG 1 cut(s) 1624
AvaII GGWCC 3 cut(s) 52, 823, 1217
BaeGI GKGCMC 1 cut(s) 689
BalI TGGCCA 1 cut(s) 1301
BamHI GGATCC 1 cut(s) 532
BanI GGYRCC 2 cut(s) 2007, 2215
BanII GRGCYC 2 cut(s) 281, 2436
BarI GAAGNNNNNNTAC 2 cut(s) 742, 774
BbrPI CACGTG 1 cut(s) 2381
Bbv12I GWGCWC 2 cut(s) 281, 689
BbvCI CCTCAGC 1 cut(s) 827
BbvI GCAGC 9 cut(s) 256, 276, 453, 454, 903, 1014, 1233, 2179, 2354
BceAI ACGGC 7 cut(s) 87, 157, 187, 336, 376, 566, 879
BciT130I CCWGG 6 cut(s) 50, 747, 1182, 1986, 2311, 2437
BciVI GTATCC 2 cut(s) 1410, 1603
BclI TGATCA 1 cut(s) 868
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 2 cut(s) 1454, 1587
BfaI CTAG 4 cut(s) 1052, 1656, 2457, 2508
BfmI CTRYAG 5 cut(s) 467, 762, 1021, 1581, 2193
BfoI RGCGCY 1 cut(s) 2011
BfrI CTTAAG 1 cut(s) 1846
BfuAI ACCTGC 2 cut(s) 1733, 2323
BfuI GTATCC 2 cut(s) 1410, 1603
BglII AGATCT 1 cut(s) 734
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 7 cut(s) 50, 185, 747, 1182, 1986, 2311, 2437
Bme18I GGWCC 3 cut(s) 52, 823, 1217
BmeT110I CYCGRG 1 cut(s) 1624
BmgT120I GGNCC 6 cut(s) 52, 404, 823, 1217, 1988, 2424
BmiI GGNNCC 7 cut(s) 54, 405, 534, 824, 1653, 2009, 2217
BmrFI CCNGG 7 cut(s) 50, 185, 747, 1182, 1986, 2311, 2437
BmrI ACTGGG 2 cut(s) 1486, 1985
BmsI GCATC 6 cut(s) 568, 598, 920, 1105, 1175, 1888
BmtI GCTAGC 1 cut(s) 1055
BmuI ACTGGG 2 cut(s) 1486, 1985
BplI GAGNNNNNCTC 2 cut(s) 2053, 2085
Bpu10I CCTNAGC 3 cut(s) 827, 976, 1404
BpuEI CTTGAG 2 cut(s) 2379, 2390
BpuMI CCSGG 1 cut(s) 185
Bsa29I ATCGAT 1 cut(s) 592
BsaAI YACGTR 2 cut(s) 352, 2381
BsaBI GATNNNNATC 1 cut(s) 2388
BsaHI GRCGYC 2 cut(s) 77, 2008
BsaJI CCNNGG 6 cut(s) 132, 318, 1706, 2309, 2310, 2435
BsaWI WCCGGW 1 cut(s) 410
Bsc4I CCNNNNNNNGG 7 cut(s) 413, 752, 901, 1438, 1583, 1996, 2161
Bse118I RCCGGY 1 cut(s) 2010
Bse1I ACTGG 5 cut(s) 536, 1302, 1324, 1492, 1991
Bse3DI GCAATG 2 cut(s) 1378, 2297
Bse8I GATNNNNATC 1 cut(s) 2388
BseBI CCWGG 6 cut(s) 50, 747, 1182, 1986, 2311, 2437
BseCI ATCGAT 1 cut(s) 592
BseDI CCNNGG 6 cut(s) 132, 318, 1706, 2309, 2310, 2435
BseGI GGATG 9 cut(s) 390, 394, 550, 1190, 1696, 1879, 2005, 2049, 2217
BseJI GATNNNNATC 1 cut(s) 2388
BseLI CCNNNNNNNGG 7 cut(s) 413, 752, 901, 1438, 1583, 1996, 2161
BseMI GCAATG 2 cut(s) 1378, 2297
BseMII CTCAG 3 cut(s) 35, 841, 1532
BseNI ACTGG 5 cut(s) 536, 1302, 1324, 1492, 1991
BseRI GAGGAG 4 cut(s) 183, 186, 189, 467
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 9 cut(s) 256, 276, 453, 454, 903, 1014, 1233, 2179, 2354
BseYI CCCAGC 3 cut(s) 435, 797, 2421
BsgI GTGCAG 2 cut(s) 1761, 1926
Bsh1236I CGCG 1 cut(s) 302
Bsh1285I CGRYCG 1 cut(s) 1483
BshFI GGCC 8 cut(s) 131, 406, 503, 1017, 1301, 1989, 2165, 2426
BshNI GGYRCC 2 cut(s) 2007, 2215
BshVI ATCGAT 1 cut(s) 592
BsiEI CGRYCG 1 cut(s) 1483
BsiHKAI GWGCWC 2 cut(s) 281, 689
BsiHKCI CYCGRG 1 cut(s) 1624
BsiSI CCGG 6 cut(s) 184, 288, 411, 542, 1355, 2011
BslFI GGGAC 6 cut(s) 38, 406, 1473, 1634, 1653, 2212
BslI CCNNNNNNNGG 7 cut(s) 413, 752, 901, 1438, 1583, 1996, 2161
BsmAI GTCTC 2 cut(s) 1454, 1587
BsmFI GGGAC 6 cut(s) 38, 406, 1473, 1634, 1653, 2212
BsnI GGCC 8 cut(s) 131, 406, 503, 1017, 1301, 1989, 2165, 2426
BsoBI CYCGRG 1 cut(s) 1624
Bsp1286I GDGCHC 3 cut(s) 281, 689, 2436
Bsp1407I TGTACA 1 cut(s) 1528
BspACI CCGC 9 cut(s) 92, 188, 200, 247, 258, 323, 487, 1244, 1876
BspANI GGCC 8 cut(s) 131, 406, 503, 1017, 1301, 1989, 2165, 2426
BspCNI CTCAG 3 cut(s) 36, 840, 1531
BspDI ATCGAT 1 cut(s) 592
BspFNI CGCG 1 cut(s) 302
BspLI GGNNCC 7 cut(s) 54, 405, 534, 824, 1653, 2009, 2217
BspMAI CTGCAG 2 cut(s) 471, 2197
BspMI ACCTGC 2 cut(s) 1733, 2323
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 8 cut(s) 221, 512, 527, 540, 737, 763, 788, 988
BspQI GCTCTTC 1 cut(s) 425
BspT107I GGYRCC 2 cut(s) 2007, 2215
BspTI CTTAAG 1 cut(s) 1846
BsrBI CCGCTC 1 cut(s) 258
BsrDI GCAATG 2 cut(s) 1378, 2297
BsrFI RCCGGY 1 cut(s) 2010
BsrGI TGTACA 1 cut(s) 1528
BsrI ACTGG 5 cut(s) 536, 1302, 1324, 1492, 1991
BssAI RCCGGY 1 cut(s) 2010
BssECI CCNNGG 6 cut(s) 132, 318, 1706, 2309, 2310, 2435
BssNAI GTATAC 2 cut(s) 713, 1574
BssNI GRCGYC 2 cut(s) 77, 2008
BssT1I CCWWGG 1 cut(s) 132
Bst1107I GTATAC 2 cut(s) 713, 1574
Bst2UI CCWGG 6 cut(s) 50, 747, 1182, 1986, 2311, 2437
Bst4CI ACNGT 7 cut(s) 397, 1074, 1270, 1308, 1759, 2128, 2267
Bst6I CTCTTC 1 cut(s) 425
BstACI GRCGYC 2 cut(s) 77, 2008
BstAFI CTTAAG 1 cut(s) 1846
BstAPI GCANNNNNTGC 1 cut(s) 1364
BstAUI TGTACA 1 cut(s) 1528
BstBAI YACGTR 2 cut(s) 352, 2381
BstC8I GCNNGC 8 cut(s) 281, 844, 1053, 1196, 1369, 1719, 1874, 2419
BstDEI CTNAG 5 cut(s) 44, 827, 976, 1404, 1518
BstDSI CCRYGG 2 cut(s) 318, 1706
BstENI CCTNNNNNAGG 1 cut(s) 411
BstF5I GGATG 9 cut(s) 390, 394, 550, 1190, 1696, 1879, 2005, 2049, 2217
BstFNI CGCG 1 cut(s) 302
BstH2I RGCGCY 1 cut(s) 2011
BstHHI GCGC 6 cut(s) 304, 442, 512, 1251, 2010, 2332
BstMAI GTCTC 2 cut(s) 1454, 1587
BstMCI CGRYCG 1 cut(s) 1483
BstMWI GCNNNNNNNGC 4 cut(s) 264, 509, 1364, 2423
BstNI CCWGG 6 cut(s) 50, 747, 1182, 1986, 2311, 2437
BstNSI RCATGY 2 cut(s) 1475, 2421
BstSCI CCNGG 7 cut(s) 48, 183, 745, 1180, 1984, 2309, 2435
BstSFI CTRYAG 5 cut(s) 467, 762, 1021, 1581, 2193
BstSLI GKGCMC 1 cut(s) 689
BstUI CGCG 1 cut(s) 302
BstV1I GCAGC 9 cut(s) 256, 276, 453, 454, 903, 1014, 1233, 2179, 2354
BstX2I RGATCY 3 cut(s) 532, 734, 755
BstYI RGATCY 3 cut(s) 532, 734, 755
BstZ17I GTATAC 2 cut(s) 713, 1574
Bsu15I ATCGAT 1 cut(s) 592
BsuI GTATCC 2 cut(s) 1410, 1603
BsuRI GGCC 8 cut(s) 131, 406, 503, 1017, 1301, 1989, 2165, 2426
BsuTUI ATCGAT 1 cut(s) 592
BtgI CCRYGG 2 cut(s) 318, 1706
BtsCI GGATG 9 cut(s) 390, 394, 550, 1190, 1696, 1879, 2005, 2049, 2217
BtsI GCAGTG 1 cut(s) 961
BtsIMutI CAGTG 6 cut(s) 543, 687, 961, 1295, 1721, 1998
BveI ACCTGC 2 cut(s) 1733, 2323
Cac8I GCNNGC 8 cut(s) 281, 844, 1053, 1196, 1369, 1719, 1874, 2419
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 6 cut(s) 304, 442, 512, 1251, 2010, 2332
Cfr10I RCCGGY 1 cut(s) 2010
Cfr13I GGNCC 6 cut(s) 52, 404, 823, 1217, 1988, 2424
ClaI ATCGAT 1 cut(s) 592
Csp6I GTAC 4 cut(s) 181, 295, 349, 1529
CspCI CAANNNNNGTGG 2 cut(s) 2367, 2402
CviAII CATG 8 cut(s) 656, 839, 1472, 1778, 1823, 2418, 2464, 2513
CviQI GTAC 4 cut(s) 181, 295, 349, 1529
DdeI CTNAG 5 cut(s) 44, 827, 976, 1404, 1518
DinI GGCGCC 1 cut(s) 2009
DraI TTTAAA 4 cut(s) 1837, 2091, 2160, 2356
DraIII CACNNNGTG 1 cut(s) 2032
EaeI YGGCCR 1 cut(s) 1299
Eam1104I CTCTTC 1 cut(s) 425
EarI CTCTTC 1 cut(s) 425
EciI GGCGGA 2 cut(s) 107, 189
Ecl136II GAGCTC 1 cut(s) 279
Eco130I CCWWGG 1 cut(s) 132
Eco24I GRGCYC 2 cut(s) 281, 2436
Eco47I GGWCC 3 cut(s) 52, 823, 1217
Eco53kI GAGCTC 1 cut(s) 279
Eco72I CACGTG 1 cut(s) 2381
Eco88I CYCGRG 1 cut(s) 1624
EcoICRI GAGCTC 1 cut(s) 279
EcoNI CCTNNNNNAGG 1 cut(s) 411
EcoO109I RGGNCCY 3 cut(s) 52, 404, 823
EcoRII CCWGG 6 cut(s) 48, 745, 1180, 1984, 2309, 2435
EcoT14I CCWWGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 1473
EcoT38I GRGCYC 2 cut(s) 281, 2436
EgeI GGCGCC 1 cut(s) 2009
EheI GGCGCC 1 cut(s) 2009
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 8 cut(s) 659, 842, 1475, 1781, 1826, 2421, 2467, 2516
FaqI GGGAC 6 cut(s) 38, 406, 1473, 1634, 1653, 2212
FatI CATG 8 cut(s) 655, 838, 1471, 1777, 1822, 2417, 2463, 2512
FauI CCCGC 1 cut(s) 251
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 4 cut(s) 314, 712, 1024, 1573
FokI GGATG 9 cut(s) 397, 401, 557, 1197, 1703, 1866, 2012, 2056, 2224
FriOI GRGCYC 2 cut(s) 281, 2436
FspBI CTAG 4 cut(s) 1052, 1656, 2457, 2508
GlaI GCGC 6 cut(s) 303, 441, 511, 1250, 2009, 2331
GsaI CCCAGC 3 cut(s) 439, 801, 2425
HaeII RGCGCY 1 cut(s) 2011
HaeIII GGCC 8 cut(s) 131, 406, 503, 1017, 1301, 1989, 2165, 2426
HapII CCGG 6 cut(s) 184, 288, 411, 542, 1355, 2011
HhaI GCGC 6 cut(s) 304, 442, 512, 1251, 2010, 2332
Hin1I GRCGYC 2 cut(s) 77, 2008
Hin1II CATG 8 cut(s) 659, 842, 1475, 1781, 1826, 2421, 2467, 2516
Hin6I GCGC 6 cut(s) 302, 440, 510, 1249, 2008, 2330
HinP1I GCGC 6 cut(s) 302, 440, 510, 1249, 2008, 2330
HincII GTYRAC 6 cut(s) 315, 1147, 1165, 1477, 1677, 2113
HindII GTYRAC 6 cut(s) 315, 1147, 1165, 1477, 1677, 2113
HindIII AAGCTT 1 cut(s) 881
HpaII CCGG 6 cut(s) 184, 288, 411, 542, 1355, 2011
HphI GGTGA 4 cut(s) 613, 1233, 1646, 2524
Hpy188III TCNNGA 9 cut(s) 217, 427, 1439, 1451, 1602, 1953, 2027, 2084, 2204
HpyAV CCTTC 4 cut(s) 1524, 1690, 2125, 2457
HpyCH4III ACNGT 7 cut(s) 397, 1074, 1270, 1308, 1759, 2128, 2267
HpyCH4IV ACGT 5 cut(s) 77, 222, 351, 787, 2380
HpyF10VI GCNNNNNNNGC 4 cut(s) 264, 509, 1364, 2423
HpyF3I CTNAG 5 cut(s) 44, 827, 976, 1404, 1518
HpySE526I ACGT 5 cut(s) 77, 222, 351, 787, 2380
Hsp92I GRCGYC 2 cut(s) 77, 2008
Hsp92II CATG 8 cut(s) 659, 842, 1475, 1781, 1826, 2421, 2467, 2516
HspAI GCGC 6 cut(s) 302, 440, 510, 1249, 2008, 2330
KasI GGCGCC 1 cut(s) 2007
Ksp22I TGATCA 1 cut(s) 868
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 5 cut(s) 261, 1357, 1810, 1959, 2497
Lsp1109I GCAGC 9 cut(s) 256, 276, 453, 454, 903, 1014, 1233, 2179, 2354
LweI GCATC 6 cut(s) 568, 598, 920, 1105, 1175, 1888
MaeI CTAG 4 cut(s) 1052, 1656, 2457, 2508
MaeII ACGT 5 cut(s) 77, 222, 351, 787, 2380
MaeIII GTNAC 3 cut(s) 1855, 1909, 1936
MbiI CCGCTC 1 cut(s) 258
MboII GAAGA 8 cut(s) 112, 388, 442, 543, 750, 1230, 1810, 2045
MfeI CAATTG 2 cut(s) 720, 1062
MflI RGATCY 3 cut(s) 532, 734, 755
MhlI GDGCHC 3 cut(s) 281, 689, 2436
MlsI TGGCCA 1 cut(s) 1301
MluNI TGGCCA 1 cut(s) 1301
Mly113I GGCGCC 1 cut(s) 2008
MlyI GAGTC 6 cut(s) 301, 1052, 1495, 1616, 2194, 2477
MmeI TCCRAC 3 cut(s) 217, 477, 898
Mox20I TGGCCA 1 cut(s) 1301
Mph1103I ATGCAT 1 cut(s) 1473
MroXI GAANNNNTTC 1 cut(s) 224
MscI TGGCCA 1 cut(s) 1301
MslI CAYNNNNRTG 2 cut(s) 692, 1466
Msp20I TGGCCA 1 cut(s) 1301
MspA1I CMGCKG 5 cut(s) 247, 466, 1246, 2192, 2345
MspCI CTTAAG 1 cut(s) 1846
MspI CCGG 6 cut(s) 184, 288, 411, 542, 1355, 2011
MspR9I CCNGG 7 cut(s) 50, 185, 747, 1182, 1986, 2311, 2437
MunI CAATTG 2 cut(s) 720, 1062
MvaI CCWGG 6 cut(s) 50, 747, 1182, 1986, 2311, 2437
MvnI CGCG 1 cut(s) 302
MwoI GCNNNNNNNGC 4 cut(s) 264, 509, 1364, 2423
NarI GGCGCC 1 cut(s) 2008
NciI CCSGG 1 cut(s) 185
NheI GCTAGC 1 cut(s) 1051
NlaIII CATG 8 cut(s) 659, 842, 1475, 1781, 1826, 2421, 2467, 2516
NlaIV GGNNCC 7 cut(s) 54, 405, 534, 824, 1653, 2009, 2217
NmuCI GTSAC 1 cut(s) 1936
NsiI ATGCAT 1 cut(s) 1473
NspI RCATGY 2 cut(s) 1475, 2421
PaeI GCATGC 1 cut(s) 2421
PaeR7I CTCGAG 1 cut(s) 1624
PciSI GCTCTTC 1 cut(s) 425
PcsI WCGNNNNNNNCGW 1 cut(s) 77
PdmI GAANNNNTTC 1 cut(s) 224
PflFI GACNNNGTC 1 cut(s) 310
PfoI TCCNGGA 1 cut(s) 1180
Ple19I CGATCG 1 cut(s) 1483
PleI GAGTC 6 cut(s) 301, 1052, 1494, 1616, 2194, 2476
PluTI GGCGCC 1 cut(s) 2011
PmaCI CACGTG 1 cut(s) 2381
PmlI CACGTG 1 cut(s) 2381
PpsI GAGTC 6 cut(s) 301, 1052, 1494, 1616, 2194, 2476
Ppu21I YACGTR 2 cut(s) 352, 2381
PpuMI RGGWCCY 2 cut(s) 52, 823
Psp124BI GAGCTC 1 cut(s) 281
Psp5II RGGWCCY 2 cut(s) 52, 823
Psp6I CCWGG 6 cut(s) 48, 745, 1180, 1984, 2309, 2435
PspCI CACGTG 1 cut(s) 2381
PspFI CCCAGC 3 cut(s) 435, 797, 2421
PspGI CCWGG 6 cut(s) 48, 745, 1180, 1984, 2309, 2435
PspN4I GGNNCC 7 cut(s) 54, 405, 534, 824, 1653, 2009, 2217
PspPI GGNCC 6 cut(s) 52, 404, 823, 1217, 1988, 2424
PspPPI RGGWCCY 2 cut(s) 52, 823
PspXI VCTCGAGB 1 cut(s) 1624
PsrI GAACNNNNNNTAC 2 cut(s) 889, 921
PstI CTGCAG 2 cut(s) 471, 2197
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 3 cut(s) 532, 734, 755
PsyI GACNNNGTC 1 cut(s) 310
PvuI CGATCG 1 cut(s) 1483
PvuII CAGCTG 3 cut(s) 466, 2192, 2345
RsaI GTAC 4 cut(s) 182, 296, 350, 1530
RsaNI GTAC 4 cut(s) 181, 295, 349, 1529
RseI CAYNNNNRTG 2 cut(s) 692, 1466
SacI GAGCTC 1 cut(s) 281
SalI GTCGAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 425
Sau96I GGNCC 6 cut(s) 52, 404, 823, 1217, 1988, 2424
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 6 cut(s) 301, 1052, 1495, 1616, 2194, 2477
ScrFI CCNGG 7 cut(s) 50, 185, 747, 1182, 1986, 2311, 2437
SduI GDGCHC 3 cut(s) 281, 689, 2436
SfaNI GCATC 6 cut(s) 568, 598, 920, 1105, 1175, 1888
SfcI CTRYAG 5 cut(s) 467, 762, 1021, 1581, 2193
SfoI GGCGCC 1 cut(s) 2009
Sfr274I CTCGAG 1 cut(s) 1624
SinI GGWCC 3 cut(s) 52, 823, 1217
SlaI CTCGAG 1 cut(s) 1624
SmiMI CAYNNNNRTG 2 cut(s) 692, 1466
SmlI CTYRAG 4 cut(s) 1624, 1846, 2369, 2394
SmoI CTYRAG 4 cut(s) 1624, 1846, 2369, 2394
SphI GCATGC 1 cut(s) 2421
SsiI CCGC 9 cut(s) 92, 188, 200, 247, 258, 323, 487, 1244, 1876
SspDI GGCGCC 1 cut(s) 2007
SspI AATATT 3 cut(s) 1100, 1888, 2280
SspMI CTAG 4 cut(s) 1052, 1656, 2457, 2508
SstI GAGCTC 1 cut(s) 281
StyD4I CCNGG 7 cut(s) 48, 183, 745, 1180, 1984, 2309, 2435
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 7 cut(s) 397, 1074, 1270, 1308, 1759, 2128, 2267
TaiI ACGT 5 cut(s) 80, 225, 354, 790, 2383
TatI WGTACW 2 cut(s) 294, 1528
TauI GCSGC 5 cut(s) 191, 250, 326, 490, 1879
TscAI CASTG 6 cut(s) 543, 694, 961, 1302, 1728, 1998
TseFI GTSAC 1 cut(s) 1936
TseI GCWGC 9 cut(s) 244, 264, 442, 466, 891, 1002, 1246, 2192, 2342
Tsp45I GTSAC 1 cut(s) 1936
TspGWI ACGGA 4 cut(s) 223, 354, 464, 1695
TspRI CASTG 6 cut(s) 543, 694, 961, 1302, 1728, 1998
Tth111I GACNNNGTC 1 cut(s) 310
Vha464I CTTAAG 1 cut(s) 1846
VneI GTGCAC 1 cut(s) 685
VpaK11BI GGWCC 3 cut(s) 52, 823, 1217
XagI CCTNNNNNAGG 1 cut(s) 411
XapI RAATTY 1 cut(s) 1817
XceI RCATGY 2 cut(s) 1475, 2421
XhoI CTCGAG 1 cut(s) 1624
XmiI GTMKAC 4 cut(s) 314, 712, 1024, 1573
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 4 cut(s) 1052, 1656, 2457, 2508
ZraI GACGTC 1 cut(s) 78
ZrmI AGTACT 1 cut(s) 296
Zsp2I ATGCAT 1 cut(s) 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.