Rorug03G0122100

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002894
Physical Location & Seq
Forward (+)
9850511 .. 9855383
4873 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0122100.1

Sequence Viewer

Length: 1527 bp
ATGCCCTCCTCTCCTTCTCTCTCTATAAATCCCTCTCTCTCCACAGCCACTCCCACTCCCACTTCATCGTCATCTTTTCCTCATTCTTCACCTCCAATATTCCTCAAATTCCCGGGCAACCAATATTCTCGGACAAGACCCATTAGCCTTTCTGCTCGTAAAGCTCGCTCGGGCTACTCAGAAAGTAGAAAACTTGAGGTTAGAGCAAGCAATATGACGATTACAGAAGTTGAGATTGAAGAAGAGGAAGAGGGTCCTCCTCCTTATGTTGAATCGGAGACCAACTCGAGGCCTCGCCGCATTGCTCTGTTTGTTGAGCCTTCCCCTTTTGCATATGTGTCAGGGTATAAGAATCGATTCCAGAATTTCATTAGGTACTTGCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACACATGAAGGAGTGCCCGAGGAATTTTATGGAGCAAAATGTATTGGATCGCGAAGCTTCCCCTGCCCTTGGTATCAGAAGGTGCCCCTTTCCCTTGCGCTCAGTCCTAGAATAATTTCAGAGGTTGCCCATTTCAAGCCTGACATCATACATGCATCCTCACCTGGAATCATGGTATTCGGTGCTCTCATCATCGCTAAATTATTGTCTGTCCCCATTGTGATGTCATACCATACTCATGTGCCAGTATATATTCCAAGATACACCTTCAGTTGGTTGGTGAAACCCATGTGGATGGTTATAAAATTCCTGCACACAGCTGCTGATCTCACACTAGTGCCTTCAGCGGCAATCGCTAAGGATCTCCAAGTTGCTGGGGTTGCAGCAGCTAACACAATTCGTCTTTGGAATAAGGGTGTTGATTCAGAAAGCTTCCATCCTCGCTTCCGTTCTGATGAAATGCGTTCAAGACTAAGCAATGGTGAACCTGAGAAACCTTTAATAGTCCATGTTGGAAGACTTGGAGTCGAGAAGAGCTTGGATTTTCTAAAAAGTGTCATGGATAGGCTTCCAGAAGCACGAATTGCTTTTATTGGAGATGGACCGTACAGGGCGGAGCTGGAAGAATTATTCTCTGGCATGCCTGCAGTATTTACAGGAATGTTAGGAGGTGAGGAGCTCTCTCAGGCGTATGCCAGCGGGGATGTTTTCGTGATGCCTTCGGAATCAGAGACACTTGGGCTTGTGGTATTGGAGGCTATGGCTTCAGGCATTCCTGTGGTAGGAGCTCGCTCAGGTGGAATCCCAGATATAATTCCGGAAGACCAGGAGGGGAAAACAGGATTTCTCTATAATTACAACGATCTTGACGACTGCTTAAGCAAATTGCGGCCTCTGTTGGAGAACAAGGAATTAAGGGAAACAATTGGCCAAGCCGCGCGCAAAGAGACAGAGAAGTTTGACTGGAAAGCAGCCACTCGAGTGATACGAAATGAACAATACAATGCTGCCATTTGGTTTTGGAGGAGGAGAAGAGCACAATTCTTGAGACCTCTGCAATGGCTGATGAAACGTATCTTCCCACAAACCCCACCGGAAATTAAGTACAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

508

Amino Acids

57.09

Weight (kDa)

8.52

Isoelectric Point (pI)

54.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_4 PF13439 115 - 281 9.7e-27 Glycosyltransferase Family 4
Glyco_trans_4_4 PF13579 115 - 270 1.2e-16 Glycosyl transferase 4-like domain
Glycos_transf_1 PF00534 300 - 453 3.9e-28 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 304 - 440 1.1e-26 Glycosyl transferases group 1
Glyco_trans_1_2 PF13524 320 - 456 1.5e-10 Glycosyl transferase-like
GT4-conflict PF20706 363 - 413 2.7e-07 Family 4 Glycosyltransferase in conflict systems
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 496
AccII CGCG 3 cut(s) 466, 1352, 1354
AccIII TCCGGA 1 cut(s) 1231
AciI CCGC 6 cut(s) 298, 761, 1028, 1113, 1303, 1350
AclWI GGATC 2 cut(s) 469, 783
AcoI YGGCCR 1 cut(s) 1342
AcsI RAATTY 4 cut(s) 107, 364, 437, 719
AcuI CTGAAG 3 cut(s) 667, 741, 1164
AfaI GTAC 3 cut(s) 377, 1022, 1520
AfiI CCNNNNNNNGG 4 cut(s) 288, 483, 687, 1196
AflII CTTAAG 1 cut(s) 1291
AgsI TTSAA 4 cut(s) 239, 272, 550, 882
AhdI GACNNNNNGTC 1 cut(s) 938
AhlI ACTAGT 1 cut(s) 748
AjnI CCWGG 2 cut(s) 577, 1239
AleI CACNNNNGTG 2 cut(s) 749, 1394
AluBI AGCT 9 cut(s) 164, 471, 734, 803, 846, 951, 1033, 1093, 1202
AluI AGCT 9 cut(s) 164, 471, 734, 803, 846, 951, 1033, 1093, 1202
Alw21I GWGCWC 4 cut(s) 601, 1095, 1204, 1453
Alw26I GTCTC 4 cut(s) 272, 1139, 1355, 1456
AlwI GGATC 2 cut(s) 469, 783
AlwNI CAGNNNCTG 1 cut(s) 737
Ama87I CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
Aor13HI TCCGGA 1 cut(s) 1231
AoxI GGCC 3 cut(s) 290, 1304, 1342
ApeKI GCWGC 5 cut(s) 734, 797, 800, 1385, 1421
ApoI RAATTY 4 cut(s) 107, 364, 437, 719
Asp700I GAANNNNTTC 2 cut(s) 356, 529
AspLEI GCGC 3 cut(s) 514, 1354, 1356
AspS9I GGNCC 2 cut(s) 254, 1016
AsuC2I CCSGG 2 cut(s) 113, 114
AsuHPI GGTGA 6 cut(s) 81, 412, 567, 706, 908, 1097
AvaI CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
AvaII GGWCC 2 cut(s) 254, 1016
BaeGI GKGCMC 2 cut(s) 432, 501
BaeI ACNNNNGTAYC 2 cut(s) 367, 400
BalI TGGCCA 1 cut(s) 1344
BanI GGYRCC 1 cut(s) 496
BanII GRGCYC 2 cut(s) 1095, 1204
BbsI GAAGAC 2 cut(s) 937, 1242
Bbv12I GWGCWC 4 cut(s) 601, 1095, 1204, 1453
BbvI GCAGC 5 cut(s) 721, 809, 812, 1397, 1408
BccI CCATC 4 cut(s) 397, 703, 858, 1007
BciT130I CCWGG 2 cut(s) 579, 1241
BcnI CCSGG 2 cut(s) 113, 114
BcoDI GTCTC 4 cut(s) 272, 1139, 1355, 1456
BcuI ACTAGT 1 cut(s) 748
BfaI CTAG 2 cut(s) 522, 749
BfmI CTRYAG 1 cut(s) 1059
BfrI CTTAAG 1 cut(s) 1291
BisI GCNGC 9 cut(s) 298, 735, 762, 798, 801, 1304, 1350, 1386, 1422
BlsI GCNGC 9 cut(s) 299, 736, 763, 799, 802, 1305, 1351, 1387, 1423
Bme1390I CCNGG 4 cut(s) 113, 114, 579, 1241
Bme18I GGWCC 2 cut(s) 254, 1016
BmeRI GACNNNNNGTC 1 cut(s) 938
BmeT110I CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
BmgT120I GGNCC 2 cut(s) 254, 1016
BmiI GGNNCC 2 cut(s) 255, 498
BmrFI CCNGG 4 cut(s) 113, 114, 579, 1241
BmsI GCATC 2 cut(s) 578, 1119
BpiI GAAGAC 2 cut(s) 937, 1242
BplI GAGNNNNNCTC 4 cut(s) 269, 301, 1079, 1111
Bpu10I CCTNAGC 2 cut(s) 771, 1207
BpuEI CTTGAG 2 cut(s) 215, 1480
BpuMI CCSGG 2 cut(s) 113, 114
Bsa29I ATCGAT 1 cut(s) 355
BsaI GGTCTC 2 cut(s) 272, 1456
BsaJI CCNNGG 3 cut(s) 112, 432, 482
BsaWI WCCGGW 2 cut(s) 1231, 1507
BsaXI ACNNNNNCTCC 4 cut(s) 34, 40, 64, 70
Bsc4I CCNNNNNNNGG 4 cut(s) 288, 483, 687, 1196
Bse1I ACTGG 2 cut(s) 659, 1382
Bse3DI GCAATG 3 cut(s) 300, 898, 1478
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 2 cut(s) 579, 1241
BseCI ATCGAT 1 cut(s) 355
BseDI CCNNGG 3 cut(s) 112, 432, 482
BseGI GGATG 5 cut(s) 400, 569, 714, 850, 1123
BseLI CCNNNNNNNGG 4 cut(s) 288, 483, 687, 1196
BseMI GCAATG 3 cut(s) 300, 898, 1478
BseMII CTCAG 5 cut(s) 192, 529, 894, 1112, 1221
BseNI ACTGG 2 cut(s) 659, 1382
BsePI GCGCGC 1 cut(s) 1352
BseRI GAGGAG 4 cut(s) 249, 1103, 1453, 1456
BseSI GKGCMC 2 cut(s) 432, 501
BseXI GCAGC 5 cut(s) 721, 809, 812, 1397, 1408
BseYI CCCAGC 1 cut(s) 788
BsgI GTGCAG 1 cut(s) 710
Bsh1236I CGCG 3 cut(s) 466, 1352, 1354
BshFI GGCC 3 cut(s) 292, 1306, 1344
BshNI GGYRCC 1 cut(s) 496
BshVI ATCGAT 1 cut(s) 355
BsiHKAI GWGCWC 4 cut(s) 601, 1095, 1204, 1453
BsiHKCI CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
BsiSI CCGG 3 cut(s) 113, 1232, 1508
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 4 cut(s) 288, 483, 687, 1196
BsmAI GTCTC 4 cut(s) 272, 1139, 1355, 1456
BsmFI GGGAC 1 cut(s) 611
BsmI GAATGC 1 cut(s) 1185
BsnI GGCC 3 cut(s) 292, 1306, 1344
Bso31I GGTCTC 2 cut(s) 272, 1456
BsoBI CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
Bsp1286I GDGCHC 6 cut(s) 432, 501, 601, 1095, 1204, 1453
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 4 cut(s) 461, 739, 775, 1276
Bsp68I TCGCGA 1 cut(s) 466
BspACI CCGC 6 cut(s) 298, 761, 1028, 1113, 1303, 1350
BspANI GGCC 3 cut(s) 292, 1306, 1344
BspCNI CTCAG 5 cut(s) 191, 528, 895, 1111, 1220
BspDI ATCGAT 1 cut(s) 355
BspEI TCCGGA 1 cut(s) 1231
BspFNI CGCG 3 cut(s) 466, 1352, 1354
BspLI GGNNCC 2 cut(s) 255, 498
BspMAI CTGCAG 1 cut(s) 1063
BspPI GGATC 2 cut(s) 469, 783
BspQI GCTCTTC 2 cut(s) 941, 1441
BspT107I GGYRCC 1 cut(s) 496
BspTI CTTAAG 1 cut(s) 1291
BspTNI GGTCTC 2 cut(s) 272, 1456
BsrDI GCAATG 3 cut(s) 300, 898, 1478
BsrI ACTGG 2 cut(s) 659, 1382
BssECI CCNNGG 3 cut(s) 112, 432, 482
BssHII GCGCGC 1 cut(s) 1352
BssMI GATC 4 cut(s) 461, 739, 775, 1276
BssT1I CCWWGG 1 cut(s) 482
Bst2UI CCWGG 2 cut(s) 579, 1241
Bst4CI ACNGT 1 cut(s) 1020
Bst6I CTCTTC 4 cut(s) 237, 243, 941, 1441
BstAFI CTTAAG 1 cut(s) 1291
BstAPI GCANNNNNTGC 1 cut(s) 998
BstC8I GCNNGC 7 cut(s) 166, 208, 1055, 1059, 1111, 1204, 1354
BstDEI CTNAG 7 cut(s) 178, 515, 771, 887, 903, 1098, 1207
BstENI CCTNNNNNAGG 1 cut(s) 1194
BstF5I GGATG 5 cut(s) 400, 569, 714, 850, 1123
BstFNI CGCG 3 cut(s) 466, 1352, 1354
BstHHI GCGC 3 cut(s) 514, 1354, 1356
BstKTI GATC 4 cut(s) 464, 742, 778, 1279
BstMAI GTCTC 4 cut(s) 272, 1139, 1355, 1456
BstMBI GATC 4 cut(s) 461, 739, 775, 1276
BstMWI GCNNNNNNNGC 5 cut(s) 161, 477, 767, 794, 998
BstNI CCWGG 2 cut(s) 579, 1241
BstNSI RCATGY 2 cut(s) 569, 1057
BstSCI CCNGG 4 cut(s) 111, 112, 577, 1239
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 432, 501
BstUI CGCG 3 cut(s) 466, 1352, 1354
BstV1I GCAGC 5 cut(s) 721, 809, 812, 1397, 1408
BstV2I GAAGAC 2 cut(s) 937, 1242
BstX2I RGATCY 1 cut(s) 775
BstXI CCANNNNNNTGG 2 cut(s) 709, 788
BstYI RGATCY 1 cut(s) 775
Bsu15I ATCGAT 1 cut(s) 355
BsuRI GGCC 3 cut(s) 292, 1306, 1344
BsuTUI ATCGAT 1 cut(s) 355
BtgZI GCGATG 1 cut(s) 592
BtsCI GGATG 5 cut(s) 400, 569, 714, 850, 1123
BtuMI TCGCGA 1 cut(s) 466
Cac8I GCNNGC 7 cut(s) 166, 208, 1055, 1059, 1111, 1204, 1354
CaiI CAGNNNCTG 1 cut(s) 737
CfoI GCGC 3 cut(s) 514, 1354, 1356
Cfr13I GGNCC 2 cut(s) 254, 1016
Cfr9I CCCGGG 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 355
Csp6I GTAC 3 cut(s) 376, 1021, 1519
CviAII CATG 8 cut(s) 419, 566, 586, 653, 703, 923, 973, 1054
CviQI GTAC 3 cut(s) 376, 1021, 1519
DdeI CTNAG 7 cut(s) 178, 515, 771, 887, 903, 1098, 1207
DpnI GATC 4 cut(s) 463, 741, 777, 1278
DpnII GATC 4 cut(s) 461, 739, 775, 1276
DriI GACNNNNNGTC 1 cut(s) 938
EaeI YGGCCR 1 cut(s) 1342
Eam1104I CTCTTC 4 cut(s) 237, 243, 941, 1441
Eam1105I GACNNNNNGTC 1 cut(s) 938
EarI CTCTTC 4 cut(s) 237, 243, 941, 1441
EciI GGCGGA 1 cut(s) 1043
Ecl136II GAGCTC 2 cut(s) 1093, 1202
Eco130I CCWWGG 1 cut(s) 482
Eco147I AGGCCT 1 cut(s) 292
Eco24I GRGCYC 2 cut(s) 1095, 1204
Eco31I GGTCTC 2 cut(s) 272, 1456
Eco47I GGWCC 2 cut(s) 254, 1016
Eco53kI GAGCTC 2 cut(s) 1093, 1202
Eco57I CTGAAG 3 cut(s) 667, 741, 1164
Eco88I CYCGRG 5 cut(s) 112, 169, 286, 431, 1392
EcoICRI GAGCTC 2 cut(s) 1093, 1202
EcoNI CCTNNNNNAGG 1 cut(s) 1194
EcoO109I RGGNCCY 1 cut(s) 254
EcoRII CCWGG 2 cut(s) 577, 1239
EcoT14I CCWWGG 1 cut(s) 482
EcoT22I ATGCAT 1 cut(s) 571
EcoT38I GRGCYC 2 cut(s) 1095, 1204
ErhI CCWWGG 1 cut(s) 482
FaeI CATG 8 cut(s) 422, 569, 589, 656, 706, 926, 976, 1057
FaqI GGGAC 1 cut(s) 611
FatI CATG 8 cut(s) 418, 565, 585, 652, 702, 922, 972, 1053
FauI CCCGC 1 cut(s) 1106
FauNDI CATATG 1 cut(s) 334
Fnu4HI GCNGC 9 cut(s) 298, 735, 762, 798, 801, 1304, 1350, 1386, 1422
FokI GGATG 5 cut(s) 407, 556, 721, 837, 1130
FriOI GRGCYC 2 cut(s) 1095, 1204
Fsp4HI GCNGC 9 cut(s) 298, 735, 762, 798, 801, 1304, 1350, 1386, 1422
FspBI CTAG 2 cut(s) 522, 749
GlaI GCGC 3 cut(s) 513, 1353, 1355
GluI GCNGC 9 cut(s) 298, 735, 762, 798, 801, 1304, 1350, 1386, 1422
GsaI CCCAGC 1 cut(s) 792
HaeIII GGCC 3 cut(s) 292, 1306, 1344
HapII CCGG 3 cut(s) 113, 1232, 1508
HhaI GCGC 3 cut(s) 514, 1354, 1356
Hin1II CATG 8 cut(s) 422, 569, 589, 656, 706, 926, 976, 1057
Hin6I GCGC 3 cut(s) 512, 1352, 1354
HinP1I GCGC 3 cut(s) 512, 1352, 1354
HindIII AAGCTT 2 cut(s) 469, 844
HinfI GANTC 8 cut(s) 272, 352, 357, 582, 836, 939, 1139, 1215
HpaII CCGG 3 cut(s) 113, 1232, 1508
HphI GGTGA 6 cut(s) 81, 412, 567, 706, 908, 1097
Hpy166II GTNNAC 1 cut(s) 899
Hpy188I TCNGA 9 cut(s) 132, 181, 277, 492, 535, 841, 868, 1138, 1144
Hpy188III TCNNGA 9 cut(s) 361, 465, 882, 943, 986, 1126, 1232, 1280, 1459
Hpy8I GTNNAC 1 cut(s) 899
HpyAV CCTTC 7 cut(s) 24, 330, 416, 487, 691, 765, 1143
HpyCH4III ACNGT 1 cut(s) 1020
HpyCH4IV ACGT 1 cut(s) 1486
HpyCH4V TGCA 6 cut(s) 332, 569, 727, 797, 1061, 1471
HpyF10VI GCNNNNNNNGC 5 cut(s) 161, 477, 767, 794, 998
HpyF3I CTNAG 7 cut(s) 178, 515, 771, 887, 903, 1098, 1207
HpySE526I ACGT 1 cut(s) 1486
Hsp92II CATG 8 cut(s) 422, 569, 589, 656, 706, 926, 976, 1057
HspAI GCGC 3 cut(s) 512, 1352, 1354
Kpn2I TCCGGA 1 cut(s) 1231
Kzo9I GATC 4 cut(s) 461, 739, 775, 1276
LguI GCTCTTC 2 cut(s) 941, 1441
LmnI GCTCC 4 cut(s) 446, 1030, 1090, 1199
Lsp1109I GCAGC 5 cut(s) 721, 809, 812, 1397, 1408
LweI GCATC 2 cut(s) 578, 1119
MaeI CTAG 2 cut(s) 522, 749
MaeII ACGT 1 cut(s) 1486
MaeIII GTNAC 1 cut(s) 409
MalI GATC 4 cut(s) 463, 741, 777, 1278
MboI GATC 4 cut(s) 461, 739, 775, 1276
MfeI CAATTG 1 cut(s) 1338
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 6 cut(s) 432, 501, 601, 1095, 1204, 1453
MlsI TGGCCA 1 cut(s) 1344
MluNI TGGCCA 1 cut(s) 1344
MlyI GAGTC 1 cut(s) 948
MmeI TCCRAC 2 cut(s) 907, 1293
Mox20I TGGCCA 1 cut(s) 1344
Mph1103I ATGCAT 1 cut(s) 571
MroI TCCGGA 1 cut(s) 1231
MroXI GAANNNNTTC 2 cut(s) 356, 529
MscI TGGCCA 1 cut(s) 1344
MseI TTAA 4 cut(s) 914, 1292, 1328, 1515
MslI CAYNNNNRTG 6 cut(s) 635, 651, 707, 749, 1190, 1394
Msp20I TGGCCA 1 cut(s) 1344
MspA1I CMGCKG 3 cut(s) 734, 761, 1113
MspCI CTTAAG 1 cut(s) 1291
MspI CCGG 3 cut(s) 113, 1232, 1508
MspR9I CCNGG 4 cut(s) 113, 114, 579, 1241
MunI CAATTG 1 cut(s) 1338
Mva1269I GAATGC 1 cut(s) 1185
MvaI CCWGG 2 cut(s) 579, 1241
MvnI CGCG 3 cut(s) 466, 1352, 1354
MwoI GCNNNNNNNGC 5 cut(s) 161, 477, 767, 794, 998
NciI CCSGG 2 cut(s) 113, 114
NdeI CATATG 1 cut(s) 334
NdeII GATC 4 cut(s) 461, 739, 775, 1276
NlaIII CATG 8 cut(s) 422, 569, 589, 656, 706, 926, 976, 1057
NlaIV GGNNCC 2 cut(s) 255, 498
NmuCI GTSAC 1 cut(s) 409
NruI TCGCGA 1 cut(s) 466
NsiI ATGCAT 1 cut(s) 571
NspI RCATGY 2 cut(s) 569, 1057
OliI CACNNNNGTG 2 cut(s) 749, 1394
PaeI GCATGC 1 cut(s) 1057
PaeR7I CTCGAG 2 cut(s) 286, 1392
PauI GCGCGC 1 cut(s) 1352
PceI AGGCCT 1 cut(s) 292
PciSI GCTCTTC 2 cut(s) 941, 1441
PcsI WCGNNNNNNNCGW 2 cut(s) 1281, 1399
PctI GAATGC 1 cut(s) 1185
PdmI GAANNNNTTC 2 cut(s) 356, 529
PfeI GAWTC 7 cut(s) 272, 352, 357, 582, 836, 1139, 1215
PkrI GCNGC 9 cut(s) 299, 736, 763, 799, 802, 1305, 1351, 1387, 1423
PleI GAGTC 1 cut(s) 947
PpsI GAGTC 1 cut(s) 947
PpuMI RGGWCCY 1 cut(s) 254
PsiI TTATAA 1 cut(s) 716
Psp124BI GAGCTC 2 cut(s) 1095, 1204
Psp5II RGGWCCY 1 cut(s) 254
Psp6I CCWGG 2 cut(s) 577, 1239
PspFI CCCAGC 1 cut(s) 788
PspGI CCWGG 2 cut(s) 577, 1239
PspN4I GGNNCC 2 cut(s) 255, 498
PspPI GGNCC 2 cut(s) 254, 1016
PspPPI RGGWCCY 1 cut(s) 254
PspXI VCTCGAGB 2 cut(s) 286, 1392
PstI CTGCAG 1 cut(s) 1063
PstNI CAGNNNCTG 1 cut(s) 737
PsuI RGATCY 1 cut(s) 775
PteI GCGCGC 1 cut(s) 1352
PvuII CAGCTG 1 cut(s) 734
RruI TCGCGA 1 cut(s) 466
RsaI GTAC 3 cut(s) 377, 1022, 1520
RsaNI GTAC 3 cut(s) 376, 1021, 1519
RseI CAYNNNNRTG 6 cut(s) 635, 651, 707, 749, 1190, 1394
SacI GAGCTC 2 cut(s) 1095, 1204
SapI GCTCTTC 2 cut(s) 941, 1441
SaqAI TTAA 4 cut(s) 914, 1292, 1328, 1515
SatI GCNGC 9 cut(s) 298, 735, 762, 798, 801, 1304, 1350, 1386, 1422
Sau3AI GATC 4 cut(s) 461, 739, 775, 1276
Sau96I GGNCC 2 cut(s) 254, 1016
SchI GAGTC 1 cut(s) 948
ScrFI CCNGG 4 cut(s) 113, 114, 579, 1241
SduI GDGCHC 6 cut(s) 432, 501, 601, 1095, 1204, 1453
SfaNI GCATC 2 cut(s) 578, 1119
SfcI CTRYAG 1 cut(s) 1059
Sfr274I CTCGAG 2 cut(s) 286, 1392
SinI GGWCC 2 cut(s) 254, 1016
SlaI CTCGAG 2 cut(s) 286, 1392
SmaI CCCGGG 1 cut(s) 114
SmiMI CAYNNNNRTG 6 cut(s) 635, 651, 707, 749, 1190, 1394
SmlI CTYRAG 5 cut(s) 194, 286, 1291, 1392, 1459
SmoI CTYRAG 5 cut(s) 194, 286, 1291, 1392, 1459
SpeI ACTAGT 1 cut(s) 748
SphI GCATGC 1 cut(s) 1057
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 6 cut(s) 298, 761, 1028, 1113, 1303, 1350
SspI AATATT 2 cut(s) 99, 125
SspMI CTAG 2 cut(s) 522, 749
SstI GAGCTC 2 cut(s) 1095, 1204
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 4 cut(s) 111, 112, 577, 1239
StyI CCWWGG 1 cut(s) 482
TaaI ACNGT 1 cut(s) 1020
TaiI ACGT 1 cut(s) 1489
TaqI TCGA 4 cut(s) 287, 355, 942, 1393
TatI WGTACW 1 cut(s) 1518
TauI GCSGC 4 cut(s) 300, 764, 1306, 1352
TfiI GAWTC 7 cut(s) 272, 352, 357, 582, 836, 1139, 1215
Tru1I TTAA 4 cut(s) 914, 1292, 1328, 1515
Tru9I TTAA 4 cut(s) 914, 1292, 1328, 1515
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 5 cut(s) 734, 797, 800, 1385, 1421
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 6 cut(s) 54, 358, 435, 885, 1422, 1496
TspGWI ACGGA 1 cut(s) 851
TspMI CCCGGG 1 cut(s) 112
Vha464I CTTAAG 1 cut(s) 1291
VpaK11BI GGWCC 2 cut(s) 254, 1016
XagI CCTNNNNNAGG 1 cut(s) 1194
XapI RAATTY 4 cut(s) 107, 364, 437, 719
XceI RCATGY 2 cut(s) 569, 1057
XhoI CTCGAG 2 cut(s) 286, 1392
XmaI CCCGGG 1 cut(s) 112
XmnI GAANNNNTTC 2 cut(s) 356, 529
XspI CTAG 2 cut(s) 522, 749
Zsp2I ATGCAT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.