Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0002894

Physical Location & Seq

Genomic Coordinates Forward (+)

16134089 .. 16137710

Gene Structure 3622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG174100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGGTACCCCTTCAGCCCTTGCCCGAGTCACTGCAGTTGCATCTTCTAGAACTGTTAGTATTATGAGCCTCCATGTCACTAATGGAAATCATTTCCACATAGACCAATATATTACTAATGCTTCTGTCTTTCATAGGTACCCAGTGCTGGAATCCATACAAAAGTACTTGTGGCCAAGACTTTGCAAGCTTGACCAAAGAACCTTGTATGAGCTGCACTACCAGATGATAACATTTGGAAAGGTCTTCTGCACAAAAAGCAAACCGAATTGCAATGCATGTCCAATGAGAGGAGAATGTAGGCATTTTGCAAGTGCATTTGCAAGTGCAAGACTTGCCTTGCCAGGGCCCGAGGAGAAAAGTTTAGTGAGCGCAACTGAAGACAGAAATACCTATCAAAACCCTGGTGAGATCAACAATGGAATGCCTTTGCCTCTCCCTCTCCCTCATCCTCACCGAACAGAACAGTTGGAAGCAAACCAGCAACTTGCAGCAAGCCAACAATCAGAACCAAAGTCTACCCTAGGTTATTGTGAACCAATTATTGAAGAACCAGCTACGCCAGAGCCAGAGTGCACACAGATAGTAGAGGACATTGAGGACTTCTATGAGGACCCAGATGAAATTCCTACAATTAAACTTAACATGGAACAGTTCACTCAGAACTTGCAAAATTATATGCAACAAAACATGGAACTTCAACAAGGAGAAATGTCAAAGGCTTTAGTTGCTCTAACACCAGATGCTGCATCTCTTCCTACACCAAAGCTTAAGAATGTGAGCCGACTACGAACTGAGCACCAAGTCTATGAACTTCCTGATTCACACCCTCTTCTAGATCGGTTGGGGTTGGATAAGCGAGAACCTGATGATCCATGCAATTACCTTTTGGCCATTTGGACACCAGGTGAAACAGCAAACTCCATTCAACCACCAGAGAATAGGTGTAGTTCTCAAGAATTTGGCAAATTGTGTGATGATAAGGAATGTTTCCAATGCAATAGTGCACGGGAAGCATATTCACAAACAGTTCGAGGGACTCTCTTGATACCATGCCGAACAGCAATGAGAGGGAGCTTCCCACTTAACGGCACCTACTTTCAAGTTAATGAGGTGTTTGCTGATCATGATTCAAGCCTTGAGCCTCTTGATGTTCCAAGAGGCTGGTTGTGGAATCTGAATAGGAGGACTGTGTACTTTGGAACCTCAATACCAACAATATTCAAAGGGTTAACAACACCAGAAATTCAACATTGCTTTTGGAGAGGATTTGTGTGCGTGAGGGGGTTTGATCAGAAATCAAGGGGTCCGCGTCCTTTAATGGCCCGGTTGCACTTCCCAGCCAGCAGGTTGGCCAAACCAAAAGACAAGAAAGAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031935 GO:0031936 GO:0032259 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035510 GO:0040029 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045815 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0080111 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1902275 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:2000112 GO:2000113 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Perm-CXXC RRM_DME

Protein Analysis

460

Amino Acids

52.2

Weight (kDa)

6.05

Isoelectric Point (pI)

43.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Perm-CXXC	PF15629	312 - 343	5.3e-14	Permuted single zf-CXXC unit
RRM_DME	PF15628	346 - 446	2.9e-52	RRM in Demeter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36490
fragaria_vesca	FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_6g17860
malus_domestica	MD12G1017600.v1.1 MD14G1015300.v1.1
prunus_persica	Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1
pyrus_communis	pycom12g01420 pycom12g01430 pycom12g01450 pycom14g01290 pycom14g01300
rosa_chinensis	RchiOBHm_Chr3g0472091
rosa_laevigata	RLG00000024104
rosa_multiflora	Rmu_sc0002532.1_g000017
rosa_roxburghii	Rroxscaffold_6G00409250
rosa_rugosa	Rorug03G0122100
rosa_samantha	Rh3AG174000 Rh3AG174100 Rh3BG199400 Rh3CG190400 Rh3CG190500 Rh3CG197800 Rh3CG197900 Rh3DG175100
rosa_wichuraiana	Rw3G016670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1338
Acc65I	GGTACC	2 cut(s)	5, 138
AccB1I	GGYRCC	3 cut(s)	5, 138, 1091
AccI	GTMKAC	1 cut(s)	518
AccII	CGCG	1 cut(s)	1312
AciI	CCGC	1 cut(s)	1310
AclWI	GGATC	1 cut(s)	866
AcoI	YGGCCR	3 cut(s)	173, 891, 1353
AcsI	RAATTY	3 cut(s)	624, 959, 1245
AcuI	CTGAAG	1 cut(s)	399
AdeI	CACNNNGTG	1 cut(s)	908
AfaI	GTAC	4 cut(s)	7, 140, 167, 1196
AfiI	CCNNNNNNNGG	4 cut(s)	148, 290, 345, 1088
AflII	CTTAAG	1 cut(s)	770
AgsI	TTSAA	7 cut(s)	548, 701, 929, 1103, 1134, 1225, 1250
AjnI	CCWGG	3 cut(s)	343, 403, 904
AluBI	AGCT	5 cut(s)	190, 214, 557, 769, 1077
AluI	AGCT	5 cut(s)	190, 214, 557, 769, 1077
Alw21I	GWGCWC	3 cut(s)	578, 801, 1009
Alw44I	GTGCAC	2 cut(s)	574, 1005
AlwI	GGATC	1 cut(s)	866
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	2 cut(s)	24, 350
AoxI	GGCC	5 cut(s)	173, 347, 891, 1323, 1353
ApaI	GGGCCC	1 cut(s)	351
ApaLI	GTGCAC	2 cut(s)	574, 1005
ApeKI	GCWGC	3 cut(s)	214, 491, 746
ApoI	RAATTY	3 cut(s)	624, 959, 1245
Asp718I	GGTACC	2 cut(s)	5, 138
AspA2I	CCTAGG	1 cut(s)	523
AspLEI	GCGC	1 cut(s)	374
AspS9I	GGNCC	5 cut(s)	347, 348, 613, 1307, 1324
AsuC2I	CCSGG	1 cut(s)	1327
AsuHPI	GGTGA	3 cut(s)	419, 446, 920
AvaI	CYCGRG	2 cut(s)	24, 350
AvaII	GGWCC	2 cut(s)	613, 1307
AvrII	CCTAGG	1 cut(s)	523
BaeGI	GKGCMC	3 cut(s)	351, 578, 1009
BalI	TGGCCA	3 cut(s)	175, 893, 1355
BanI	GGYRCC	3 cut(s)	5, 138, 1091
BanII	GRGCYC	1 cut(s)	351
BbsI	GAAGAC	2 cut(s)	238, 387
Bbv12I	GWGCWC	3 cut(s)	578, 801, 1009
BbvI	GCAGC	3 cut(s)	201, 503, 733
BceAI	ACGGC	1 cut(s)	1105
BciT130I	CCWGG	3 cut(s)	345, 405, 906
BclI	TGATCA	2 cut(s)	1123, 1291
BcnI	CCSGG	1 cut(s)	1327
BfaI	CTAG	3 cut(s)	48, 524, 836
BfmI	CTRYAG	1 cut(s)	33
BfrI	CTTAAG	1 cut(s)	770
BfuAI	ACCTGC	1 cut(s)	1338
BisI	GCNGC	3 cut(s)	215, 492, 747
BlnI	CCTAGG	1 cut(s)	523
BlsI	GCNGC	3 cut(s)	216, 493, 748
BmcAI	AGTACT	1 cut(s)	167
Bme1390I	CCNGG	4 cut(s)	345, 405, 906, 1327
Bme18I	GGWCC	2 cut(s)	613, 1307
BmeT110I	CYCGRG	2 cut(s)	24, 350
BmgT120I	GGNCC	5 cut(s)	347, 348, 613, 1307, 1324
BmiI	GGNNCC	7 cut(s)	7, 140, 349, 615, 1093, 1204, 1308
BmrFI	CCNGG	4 cut(s)	345, 405, 906, 1327
BmrI	ACTGGG	1 cut(s)	137
BmsI	GCATC	3 cut(s)	50, 733, 758
BmuI	ACTGGG	1 cut(s)	137
BpiI	GAAGAC	2 cut(s)	238, 387
BplI	GAGNNNNNCTC	2 cut(s)	1026, 1058
BpuEI	CTTGAG	2 cut(s)	939, 1160
BpuMI	CCSGG	1 cut(s)	1327
BsaJI	CCNNGG	4 cut(s)	344, 351, 403, 523
Bsc4I	CCNNNNNNNGG	4 cut(s)	148, 290, 345, 1088
Bse1I	ACTGG	1 cut(s)	143
Bse3DI	GCAATG	3 cut(s)	280, 1071, 1252
BseBI	CCWGG	3 cut(s)	345, 405, 906
BseDI	CCNNGG	4 cut(s)	344, 351, 403, 523
BseGI	GGATG	1 cut(s)	448
BseLI	CCNNNNNNNGG	4 cut(s)	148, 290, 345, 1088
BseMI	GCAATG	3 cut(s)	280, 1071, 1252
BseMII	CTCAG	2 cut(s)	674, 786
BseNI	ACTGG	1 cut(s)	143
BseRI	GAGGAG	2 cut(s)	306, 368
BseSI	GKGCMC	3 cut(s)	351, 578, 1009
BseXI	GCAGC	3 cut(s)	201, 503, 733
BseYI	CCCAGC	1 cut(s)	1339
BsgI	GTGCAG	2 cut(s)	200, 235
Bsh1236I	CGCG	1 cut(s)	1312
BshFI	GGCC	5 cut(s)	175, 349, 893, 1325, 1355
BshNI	GGYRCC	3 cut(s)	5, 138, 1091
BsiHKAI	GWGCWC	3 cut(s)	578, 801, 1009
BsiHKCI	CYCGRG	2 cut(s)	24, 350
BsiSI	CCGG	1 cut(s)	1327
BslFI	GGGAC	1 cut(s)	1051
BslI	CCNNNNNNNGG	4 cut(s)	148, 290, 345, 1088
BsmFI	GGGAC	1 cut(s)	1051
BsmI	GAATGC	1 cut(s)	429
BsnI	GGCC	5 cut(s)	175, 349, 893, 1325, 1355
BsoBI	CYCGRG	2 cut(s)	24, 350
Bsp120I	GGGCCC	1 cut(s)	347
Bsp1286I	GDGCHC	4 cut(s)	351, 578, 801, 1009
Bsp143I	GATC	5 cut(s)	411, 838, 871, 1123, 1291
BspACI	CCGC	1 cut(s)	1310
BspANI	GGCC	5 cut(s)	175, 349, 893, 1325, 1355
BspCNI	CTCAG	2 cut(s)	673, 787
BspFNI	CGCG	1 cut(s)	1312
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	7 cut(s)	7, 140, 349, 615, 1093, 1204, 1308
BspMAI	CTGCAG	1 cut(s)	37
BspMI	ACCTGC	1 cut(s)	1338
BspPI	GGATC	1 cut(s)	866
BspT107I	GGYRCC	3 cut(s)	5, 138, 1091
BspTI	CTTAAG	1 cut(s)	770
BsrDI	GCAATG	3 cut(s)	280, 1071, 1252
BsrI	ACTGG	1 cut(s)	143
BssECI	CCNNGG	4 cut(s)	344, 351, 403, 523
BssMI	GATC	5 cut(s)	411, 838, 871, 1123, 1291
BssT1I	CCWWGG	1 cut(s)	523
Bst2UI	CCWGG	3 cut(s)	345, 405, 906
Bst4CI	ACNGT	5 cut(s)	55, 468, 654, 1030, 1192
Bst6I	CTCTTC	2 cut(s)	759, 837
BstAFI	CTTAAG	1 cut(s)	770
BstAPI	GCANNNNNTGC	1 cut(s)	335
BstC8I	GCNNGC	3 cut(s)	188, 496, 1345
BstDEI	CTNAG	2 cut(s)	660, 795
BstF5I	GGATG	1 cut(s)	448
BstFNI	CGCG	1 cut(s)	1312
BstHHI	GCGC	1 cut(s)	374
BstKTI	GATC	5 cut(s)	414, 841, 874, 1126, 1294
BstMBI	GATC	5 cut(s)	411, 838, 871, 1123, 1291
BstMWI	GCNNNNNNNGC	4 cut(s)	258, 335, 728, 1013
BstNI	CCWGG	3 cut(s)	345, 405, 906
BstNSI	RCATGY	1 cut(s)	282
BstSCI	CCNGG	4 cut(s)	343, 403, 904, 1325
BstSFI	CTRYAG	1 cut(s)	33
BstSLI	GKGCMC	3 cut(s)	351, 578, 1009
BstUI	CGCG	1 cut(s)	1312
BstV1I	GCAGC	3 cut(s)	201, 503, 733
BstV2I	GAAGAC	2 cut(s)	238, 387
BstXI	CCANNNNNNTGG	2 cut(s)	1164, 1351
BsuRI	GGCC	5 cut(s)	175, 349, 893, 1325, 1355
BtsCI	GGATG	1 cut(s)	448
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	2 cut(s)	30, 150
BveI	ACCTGC	1 cut(s)	1338
Cac8I	GCNNGC	3 cut(s)	188, 496, 1345
CaiI	CAGNNNCTG	1 cut(s)	746
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	1 cut(s)	374
Cfr13I	GGNCC	5 cut(s)	347, 348, 613, 1307, 1324
CseI	GACGC	1 cut(s)	1301
CsiI	ACCWGGT	1 cut(s)	904
Csp6I	GTAC	4 cut(s)	6, 139, 166, 1195
CviAII	CATG	7 cut(s)	74, 279, 646, 691, 876, 1053, 1127
CviQI	GTAC	4 cut(s)	6, 139, 166, 1195
DdeI	CTNAG	2 cut(s)	660, 795
DpnI	GATC	5 cut(s)	413, 840, 873, 1125, 1293
DpnII	GATC	5 cut(s)	411, 838, 871, 1123, 1291
DraIII	CACNNNGTG	1 cut(s)	908
EaeI	YGGCCR	3 cut(s)	173, 891, 1353
Eam1104I	CTCTTC	2 cut(s)	759, 837
EarI	CTCTTC	2 cut(s)	759, 837
Eco130I	CCWWGG	1 cut(s)	523
Eco24I	GRGCYC	1 cut(s)	351
Eco47I	GGWCC	2 cut(s)	613, 1307
Eco57I	CTGAAG	1 cut(s)	399
Eco88I	CYCGRG	2 cut(s)	24, 350
EcoO109I	RGGNCCY	2 cut(s)	347, 613
EcoRII	CCWGG	3 cut(s)	343, 403, 904
EcoT14I	CCWWGG	1 cut(s)	523
EcoT22I	ATGCAT	1 cut(s)	280
EcoT38I	GRGCYC	1 cut(s)	351
ErhI	CCWWGG	1 cut(s)	523
FaeI	CATG	7 cut(s)	77, 282, 649, 694, 879, 1056, 1130
FaqI	GGGAC	1 cut(s)	1051
FatI	CATG	7 cut(s)	73, 278, 645, 690, 875, 1052, 1126
FbaI	TGATCA	2 cut(s)	1123, 1291
FblI	GTMKAC	1 cut(s)	518
Fnu4HI	GCNGC	3 cut(s)	215, 492, 747
FokI	GGATG	1 cut(s)	435
FriOI	GRGCYC	1 cut(s)	351
Fsp4HI	GCNGC	3 cut(s)	215, 492, 747
FspBI	CTAG	3 cut(s)	48, 524, 836
GlaI	GCGC	1 cut(s)	373
GluI	GCNGC	3 cut(s)	215, 492, 747
GsaI	CCCAGC	1 cut(s)	1343
HaeIII	GGCC	5 cut(s)	175, 349, 893, 1325, 1355
HapII	CCGG	1 cut(s)	1327
HgaI	GACGC	1 cut(s)	1301
HhaI	GCGC	1 cut(s)	374
Hin1II	CATG	7 cut(s)	77, 282, 649, 694, 879, 1056, 1130
Hin6I	GCGC	1 cut(s)	372
HinP1I	GCGC	1 cut(s)	372
HincII	GTYRAC	1 cut(s)	1233
HindII	GTYRAC	1 cut(s)	1233
HindIII	AAGCTT	2 cut(s)	188, 767
HinfI	GANTC	6 cut(s)	27, 152, 821, 1039, 1130, 1174
HpaI	GTTAAC	1 cut(s)	1233
HpaII	CCGG	1 cut(s)	1327
HphI	GGTGA	3 cut(s)	419, 446, 920
Hpy166II	GTNNAC	7 cut(s)	519, 536, 576, 657, 1007, 1195, 1233
Hpy188I	TCNGA	4 cut(s)	508, 663, 1179, 1296
Hpy188III	TCNNGA	7 cut(s)	48, 818, 836, 956, 1045, 1127, 1148
Hpy8I	GTNNAC	7 cut(s)	519, 536, 576, 657, 1007, 1195, 1233
HpyAV	CCTTC	1 cut(s)	21
HpyCH4III	ACNGT	5 cut(s)	55, 468, 654, 1030, 1192
HpyF10VI	GCNNNNNNNGC	4 cut(s)	258, 335, 728, 1013
HpyF3I	CTNAG	2 cut(s)	660, 795
Hsp92II	CATG	7 cut(s)	77, 282, 649, 694, 879, 1056, 1130
HspAI	GCGC	1 cut(s)	372
KpnI	GGTACC	2 cut(s)	9, 142
Ksp22I	TGATCA	2 cut(s)	1123, 1291
KspAI	GTTAAC	1 cut(s)	1233
Kzo9I	GATC	5 cut(s)	411, 838, 871, 1123, 1291
LmnI	GCTCC	1 cut(s)	1074
Lsp1109I	GCAGC	3 cut(s)	201, 503, 733
LweI	GCATC	3 cut(s)	50, 733, 758
MabI	ACCWGGT	1 cut(s)	904
MaeI	CTAG	3 cut(s)	48, 524, 836
MaeIII	GTNAC	2 cut(s)	28, 76
MalI	GATC	5 cut(s)	413, 840, 873, 1125, 1293
MboI	GATC	5 cut(s)	411, 838, 871, 1123, 1291
MboII	GAAGA	6 cut(s)	36, 238, 392, 560, 746, 824
MhlI	GDGCHC	4 cut(s)	351, 578, 801, 1009
MlsI	TGGCCA	3 cut(s)	175, 893, 1355
MluCI	AATT	9 cut(s)	268, 540, 624, 633, 673, 880, 959, 968, 1245
MluNI	TGGCCA	3 cut(s)	175, 893, 1355
MlyI	GAGTC	2 cut(s)	36, 1033
MmeI	TCCRAC	2 cut(s)	450, 831
Mox20I	TGGCCA	3 cut(s)	175, 893, 1355
Mph1103I	ATGCAT	1 cut(s)	280
MscI	TGGCCA	3 cut(s)	175, 893, 1355
MseI	TTAA	7 cut(s)	636, 642, 771, 1086, 1107, 1232, 1319
Msp20I	TGGCCA	3 cut(s)	175, 893, 1355
MspCI	CTTAAG	1 cut(s)	770
MspI	CCGG	1 cut(s)	1327
MspR9I	CCNGG	4 cut(s)	345, 405, 906, 1327
Mva1269I	GAATGC	1 cut(s)	429
MvaI	CCWGG	3 cut(s)	345, 405, 906
MvnI	CGCG	1 cut(s)	1312
MwoI	GCNNNNNNNGC	4 cut(s)	258, 335, 728, 1013
NciI	CCSGG	1 cut(s)	1327
NdeII	GATC	5 cut(s)	411, 838, 871, 1123, 1291
NlaIII	CATG	7 cut(s)	77, 282, 649, 694, 879, 1056, 1130
NlaIV	GGNNCC	7 cut(s)	7, 140, 349, 615, 1093, 1204, 1308
NmuCI	GTSAC	2 cut(s)	28, 76
NsiI	ATGCAT	1 cut(s)	280
NspI	RCATGY	1 cut(s)	282
PagI	TCATGA	1 cut(s)	1126
PctI	GAATGC	1 cut(s)	429
PfeI	GAWTC	4 cut(s)	152, 821, 1130, 1174
PkrI	GCNGC	3 cut(s)	216, 493, 748
PleI	GAGTC	2 cut(s)	35, 1033
PpsI	GAGTC	2 cut(s)	35, 1033
PpuMI	RGGWCCY	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	613
Psp6I	CCWGG	3 cut(s)	343, 403, 904
PspFI	CCCAGC	1 cut(s)	1339
PspGI	CCWGG	3 cut(s)	343, 403, 904
PspN4I	GGNNCC	7 cut(s)	7, 140, 349, 615, 1093, 1204, 1308
PspOMI	GGGCCC	1 cut(s)	347
PspPI	GGNCC	5 cut(s)	347, 348, 613, 1307, 1324
PspPPI	RGGWCCY	1 cut(s)	613
PstI	CTGCAG	1 cut(s)	37
PstNI	CAGNNNCTG	1 cut(s)	746
RsaI	GTAC	4 cut(s)	7, 140, 167, 1196
RsaNI	GTAC	4 cut(s)	6, 139, 166, 1195
SaqAI	TTAA	7 cut(s)	636, 642, 771, 1086, 1107, 1232, 1319
SatI	GCNGC	3 cut(s)	215, 492, 747
Sau3AI	GATC	5 cut(s)	411, 838, 871, 1123, 1291
Sau96I	GGNCC	5 cut(s)	347, 348, 613, 1307, 1324
ScaI	AGTACT	1 cut(s)	167
SchI	GAGTC	2 cut(s)	36, 1033
ScrFI	CCNGG	4 cut(s)	345, 405, 906, 1327
SduI	GDGCHC	4 cut(s)	351, 578, 801, 1009
SexAI	ACCWGGT	1 cut(s)	904
SfaNI	GCATC	3 cut(s)	50, 733, 758
SfcI	CTRYAG	1 cut(s)	33
SinI	GGWCC	2 cut(s)	613, 1307
SmlI	CTYRAG	3 cut(s)	770, 954, 1139
SmoI	CTYRAG	3 cut(s)	770, 954, 1139
Sse9I	AATT	9 cut(s)	268, 540, 624, 633, 673, 880, 959, 968, 1245
SsiI	CCGC	1 cut(s)	1310
SspI	AATATT	1 cut(s)	1221
SspMI	CTAG	3 cut(s)	48, 524, 836
StyD4I	CCNGG	4 cut(s)	343, 403, 904, 1325
StyI	CCWWGG	1 cut(s)	523
TaaI	ACNGT	5 cut(s)	55, 468, 654, 1030, 1192
TaqI	TCGA	1 cut(s)	1033
TasI	AATT	9 cut(s)	268, 540, 624, 633, 673, 880, 959, 968, 1245
TatI	WGTACW	2 cut(s)	165, 1194
TfiI	GAWTC	4 cut(s)	152, 821, 1130, 1174
Tru1I	TTAA	7 cut(s)	636, 642, 771, 1086, 1107, 1232, 1319
Tru9I	TTAA	7 cut(s)	636, 642, 771, 1086, 1107, 1232, 1319
TscAI	CASTG	2 cut(s)	37, 150
TseFI	GTSAC	2 cut(s)	28, 76
TseI	GCWGC	3 cut(s)	214, 491, 746
Tsp45I	GTSAC	2 cut(s)	28, 76
TspDTI	ATGAA	3 cut(s)	122, 636, 825
TspRI	CASTG	2 cut(s)	37, 150
Vha464I	CTTAAG	1 cut(s)	770
VneI	GTGCAC	2 cut(s)	574, 1005
VpaK11BI	GGWCC	2 cut(s)	613, 1307
XapI	RAATTY	3 cut(s)	624, 959, 1245
XbaI	TCTAGA	2 cut(s)	47, 835
XceI	RCATGY	1 cut(s)	282
XcmI	CCANNNNNNNNNTGG	1 cut(s)	80
XmaJI	CCTAGG	1 cut(s)	523
XmiI	GTMKAC	1 cut(s)	518
XspI	CTAG	3 cut(s)	48, 524, 836
ZrmI	AGTACT	1 cut(s)	167
Zsp2I	ATGCAT	1 cut(s)	280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.