Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0002894

Physical Location & Seq

Genomic Coordinates Forward (+)

1193200 .. 1196540

Gene Structure 3341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g01420.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGGTGAACAGGGAGGAGATCAAAGTTCTTGCTGTTGGATGCCACCAACTCCTTACAGGCCTATTCTCACCAGACCGGAGACCAAATTTCGGCCGGAAATTTCGACGTCCTCGAGACCATTGGGGGTAGAAGAAATTCAGGAGAATAGATTAGTTATAGACTTGGATCCGGATCCGGCGGAAGAGAGCGGATTTGTTTACCATGGAGATGGAGTTGGAGCCGGCAGCGGCGTTGAAACTTCAACGGACGCTTATTTCCGCCGCGTGGCACAGTGGAGAGATGTCCCTTGCAAAGAGCTCATGATCCTTGCGGTGGCCTCTGCAAATGATGGGAGCGGTAGTACTGTGCTGCGAGATACTCAGCATGAATTTTCATTCCCTGACAACCATCCTTATGATCTGAATATTCCACCTCCGACTACAAATGGCCAATTTGCACCTATAACACCGGATAAGTCCATGAGAGTAGACAGTGAACAAATGTATCGAATTCCAAGCTCCAATGCTGACGATGGACAAGGCCAGGAGATAGAAGAGCAATGGGATGCTAATTCTGCGACAATTAATATCATTGATCTGGAAAACAATAAAGATATAGAAAAATCTGCTGTGGATTCCTCACAAGCTACTTTCTCCACGCAGCTCCAGGAACATTGCAGCCCTGACAAGGAGGTGAACATCAGTATCGACTTGAACAAGACACCACAACCGAAACAAAGAAGGAGAAAGCACAGGCCGAAGGTGATTATAGAAGGCAAGCCAAAAAGAAACACACAGCCTTCTGGTTCTATGGAAAATCCAAAACCCAAAAGAAAGTATGTGCGCAAGAGTACACTCGACAAAAGCACAACTGCTCCACCGCAGGAATCTACAGAGCATATTGATTCAAATAATCTGCAGCCTACGAAGAGATCTTGCAGAAAGGCTTTAAATTTTGACGCAGAAGAACCAAGAGATGGAAGTTCCTCAAGCAAGTCTTTACATGTGGGTTCACAATCACAGGAGATGAATGTTGGCACCAATGGAGTTCAAACAAATTCAACCGCACCACACAGAAATGAAGTTGAATTGGTGGCAGATAACACCCAAGCAGGCATAGCCCAAGATCTCATCCGTTCTACAAGCCGAATGCTGAAACATTACTTGTCATTGCCAGACCAACAACCTCCAAGCAGACCACAACAAACCAGAGGTTCTACTACATATGTTGAATCCCAAAAGGAGGCTGCAGAAGAAGTAGGACAAATGAGCACTGGTAGTGGATACACTGCACAAACCATGTTGGATCGGGACACTAGATCATCCCAACGAAGTGCAAATGATTCCACCCACAGCACAACTACAGTTCTGACAATAGAAGAACAAGCAAAAAGATCAAAGAGAAATTATTCGAGTGCTGTTGAGCAAGAAGATCCTAGGACCGGAAATTTATACGGGGCAAACTATAATAATTTGCCGGCATACTACAATGTGATGTCATGGGTGCATTTTCCATACATACACAAGAAGAAGAGGACTGATAAGGTGCAAAATTCTACCATACCAAGCACCTCGTATCATGTGAATATGGCAGAAAACATATGGAGACCATCGGCAGCTGGCTGCTTGACTCCTGGTCCTCAAGTAAATGCTGGTAATGTTTCAACTGCACTTGAAGAAGTAGGAAATAACCCTCAGGATAGACCGCAAGGTGTTCACAGTTTCCTGCCCTTGTATCAGACAGAGAGGTCAACAAAGAGAAGATCTAGTTGCCCTACAAGAGTTCGCAACTTGGCTTCACTAACCAGAACACCAGAGCACATTCTGCACAGAACCGGTCTCGCCAATCAACCACCCACTGATGGCAATGGTCAAAGGGTGAATCAATTCGACAGATCTCAGACATGCATTAACGCCCTAGTCACAGATGTGGGTGCAACACTCGCAAAAAGGAAGAGGACAAAGAGAAATCCACTTTCCAGTTCACAACGAGGTCTTGTAATATATAAGAACCAGCCATATTTTGCCAAAGCATCAGGTGTTCCTCCACGAGTACCATTCGAACAACTGCTTTCTGCTATTACTGAGCACTTCAAATGTTTGGACATTAATAGAGAAAATAGCAGCAGATTTGCCTATCACGGGTATAATGTCATCTCTTCTTACAAGGCAAAAGATCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031935 GO:0031936 GO:0032259 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035510 GO:0040029 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045815 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0080111 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1902275 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:2000112 GO:2000113 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Perm-CXXC RRM_DME

Protein Analysis

721

Amino Acids

80.21

Weight (kDa)

8.62

Isoelectric Point (pI)

62.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36490
fragaria_vesca	FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_6g17860
malus_domestica	MD12G1017600.v1.1 MD14G1015300.v1.1
prunus_persica	Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1
pyrus_communis	pycom12g01420 pycom12g01430 pycom12g01450 pycom14g01290 pycom14g01300
rosa_chinensis	RchiOBHm_Chr3g0472091
rosa_laevigata	RLG00000024104
rosa_multiflora	Rmu_sc0002532.1_g000017
rosa_roxburghii	Rroxscaffold_6G00409250
rosa_rugosa	Rorug03G0122100
rosa_samantha	Rh3AG174000 Rh3AG174100 Rh3BG199400 Rh3CG190400 Rh3CG190500 Rh3CG197800 Rh3CG197900 Rh3DG175100
rosa_wichuraiana	Rw3G016670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1726
AatII	GACGTC	1 cut(s)	110
Acc16I	TGCGCA	1 cut(s)	824
AccB1I	GGYRCC	1 cut(s)	1016
AccB7I	CCANNNNNTGG	1 cut(s)	956
AccBSI	CCGCTC	2 cut(s)	189, 336
AccI	GTMKAC	1 cut(s)	468
AccII	CGCG	1 cut(s)	264
AccIII	TCCGGA	1 cut(s)	169
AclWI	GGATC	7 cut(s)	161, 167, 174, 180, 298, 1293, 1406
AcoI	YGGCCR	2 cut(s)	92, 427
AcsI	RAATTY	9 cut(s)	86, 99, 135, 368, 489, 931, 1036, 1426, 1531
AcyI	GRCGYC	1 cut(s)	107
AfaI	GTAC	3 cut(s)	343, 832, 2034
AfiI	CCNNNNNNNGG	9 cut(s)	90, 265, 313, 667, 956, 1222, 1421, 1841, 2121
AflIII	ACRYGT	1 cut(s)	982
AgeI	ACCGGT	1 cut(s)	1814
AhdI	GACNNNNNGTC	1 cut(s)	1614
AjnI	CCWGG	3 cut(s)	522, 645, 1612
AleI	CACNNNNGTG	1 cut(s)	1907
AluBI	AGCT	5 cut(s)	298, 498, 626, 643, 1598
AluI	AGCT	5 cut(s)	298, 498, 626, 643, 1598
Alw21I	GWGCWC	4 cut(s)	300, 1253, 1800, 2070
Alw26I	GTCTC	4 cut(s)	74, 109, 1579, 1823
AlwI	GGATC	7 cut(s)	161, 167, 174, 180, 298, 1293, 1406
Ama87I	CYCGRG	1 cut(s)	112
Aor13HI	TCCGGA	1 cut(s)	169
AoxI	GGCC	6 cut(s)	59, 92, 315, 427, 520, 734
ApeKI	GCWGC	9 cut(s)	225, 349, 640, 657, 898, 1226, 1595, 1602, 2103
ApoI	RAATTY	9 cut(s)	86, 99, 135, 368, 489, 931, 1036, 1426, 1531
AseI	ATTAAT	2 cut(s)	564, 2088
AsiGI	ACCGGT	1 cut(s)	1814
Asp700I	GAANNNNTTC	3 cut(s)	135, 1387, 1865
AspA2I	CCTAGG	1 cut(s)	1415
AspLEI	GCGC	1 cut(s)	825
AspS9I	GGNCC	2 cut(s)	1419, 1616
AsuHPI	GGTGA	5 cut(s)	17, 61, 685, 754, 1870
AsuII	TTCGAA	1 cut(s)	2040
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	2 cut(s)	1419, 1616
AvrII	CCTAGG	1 cut(s)	1415
AxyI	CCTNAGG	1 cut(s)	1674
BaeI	ACNNNNGTAYC	4 cut(s)	467, 500, 667, 700
BalI	TGGCCA	1 cut(s)	429
BamHI	GGATCC	2 cut(s)	166, 172
BanI	GGYRCC	1 cut(s)	1016
BanII	GRGCYC	1 cut(s)	300
BauI	CACGAG	1 cut(s)	2028
Bbv12I	GWGCWC	4 cut(s)	300, 1253, 1800, 2070
BbvI	GCAGC	9 cut(s)	237, 336, 652, 669, 910, 1213, 1589, 1607, 2115
BccI	CCATC	7 cut(s)	203, 323, 396, 506, 950, 1597, 1835
BciT130I	CCWGG	3 cut(s)	524, 647, 1614
BciVI	GTATCC	1 cut(s)	1256
BcoDI	GTCTC	4 cut(s)	74, 109, 1579, 1823
BfaI	CTAG	4 cut(s)	1296, 1416, 1746, 1898
BfmI	CTRYAG	4 cut(s)	870, 896, 1227, 1341
BfuI	GTATCC	1 cut(s)	1256
BglII	AGATCT	4 cut(s)	911, 1105, 1742, 1874
BlnI	CCTAGG	1 cut(s)	1415
BmcAI	AGTACT	1 cut(s)	343
Bme1390I	CCNGG	3 cut(s)	524, 647, 1614
Bme18I	GGWCC	2 cut(s)	1419, 1616
BmeRI	GACNNNNNGTC	1 cut(s)	1614
BmeT110I	CYCGRG	1 cut(s)	112
BmgT120I	GGNCC	2 cut(s)	1419, 1616
BmiI	GGNNCC	4 cut(s)	168, 174, 220, 1018
BmrFI	CCNGG	3 cut(s)	524, 647, 1614
BmsI	GCATC	3 cut(s)	30, 535, 2021
BpmI	CTGGAG	1 cut(s)	629
Bpu14I	TTCGAA	1 cut(s)	2040
BpuEI	CTTGAG	2 cut(s)	952, 1605
Bsa29I	ATCGAT	1 cut(s)	2158
BsaBI	GATNNNNATC	1 cut(s)	171
BsaHI	GRCGYC	1 cut(s)	107
BsaI	GGTCTC	4 cut(s)	74, 109, 1579, 1823
BsaJI	CCNNGG	2 cut(s)	202, 1415
BsaWI	WCCGGW	5 cut(s)	76, 169, 448, 1421, 1814
BsaXI	ACNNNNNCTCC	6 cut(s)	198, 228, 325, 355, 838, 868
Bsc4I	CCNNNNNNNGG	9 cut(s)	90, 265, 313, 667, 956, 1222, 1421, 1841, 2121
Bse118I	RCCGGY	3 cut(s)	221, 1456, 1814
Bse1I	ACTGG	2 cut(s)	1258, 1959
Bse21I	CCTNAGG	1 cut(s)	1674
Bse3DI	GCAATG	4 cut(s)	545, 652, 1148, 1852
Bse8I	GATNNNNATC	1 cut(s)	171
BseAI	TCCGGA	1 cut(s)	169
BseBI	CCWGG	3 cut(s)	524, 647, 1614
BseCI	ATCGAT	1 cut(s)	2158
BseDI	CCNNGG	2 cut(s)	202, 1415
BseGI	GGATG	5 cut(s)	45, 388, 550, 1110, 1301
BseJI	GATNNNNATC	1 cut(s)	171
BseLI	CCNNNNNNNGG	9 cut(s)	90, 265, 313, 667, 956, 1222, 1421, 1841, 2121
BseMI	GCAATG	4 cut(s)	545, 652, 1148, 1852
BseMII	CTCAG	4 cut(s)	374, 1688, 1892, 2055
BseNI	ACTGG	2 cut(s)	1258, 1959
BseRI	GAGGAG	1 cut(s)	30
BseX3I	CGGCCG	1 cut(s)	92
BseXI	GCAGC	9 cut(s)	237, 336, 652, 669, 910, 1213, 1589, 1607, 2115
BsgI	GTGCAG	3 cut(s)	1254, 1632, 1790
Bsh1236I	CGCG	1 cut(s)	264
Bsh1285I	CGRYCG	1 cut(s)	95
BshFI	GGCC	6 cut(s)	61, 94, 317, 429, 522, 736
BshNI	GGYRCC	1 cut(s)	1016
BshTI	ACCGGT	1 cut(s)	1814
BshVI	ATCGAT	1 cut(s)	2158
BsiEI	CGRYCG	1 cut(s)	95
BsiHKAI	GWGCWC	4 cut(s)	300, 1253, 1800, 2070
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	9 cut(s)	77, 95, 170, 176, 222, 449, 1422, 1457, 1815
BslFI	GGGAC	2 cut(s)	269, 1304
BslI	CCNNNNNNNGG	9 cut(s)	90, 265, 313, 667, 956, 1222, 1421, 1841, 2121
BsmAI	GTCTC	4 cut(s)	74, 109, 1579, 1823
BsmFI	GGGAC	2 cut(s)	269, 1304
BsmI	GAATGC	1 cut(s)	1134
BsnI	GGCC	6 cut(s)	61, 94, 317, 429, 522, 736
Bso31I	GGTCTC	4 cut(s)	74, 109, 1579, 1823
BsoBI	CYCGRG	1 cut(s)	112
Bsp119I	TTCGAA	1 cut(s)	2040
Bsp1286I	GDGCHC	4 cut(s)	300, 1253, 1800, 2070
Bsp13I	TCCGGA	1 cut(s)	169
Bsp19I	CCATGG	1 cut(s)	202
BspANI	GGCC	6 cut(s)	61, 94, 317, 429, 522, 736
BspCNI	CTCAG	4 cut(s)	373, 1687, 1891, 2056
BspDI	ATCGAT	1 cut(s)	2158
BspEI	TCCGGA	1 cut(s)	169
BspFNI	CGCG	1 cut(s)	264
BspHI	TCATGA	1 cut(s)	300
BspLI	GGNNCC	4 cut(s)	168, 174, 220, 1018
BspMAI	CTGCAG	2 cut(s)	900, 1231
BspPI	GGATC	7 cut(s)	161, 167, 174, 180, 298, 1293, 1406
BspQI	GCTCTTC	1 cut(s)	528
BspT104I	TTCGAA	1 cut(s)	2040
BspT107I	GGYRCC	1 cut(s)	1016
BspTNI	GGTCTC	4 cut(s)	74, 109, 1579, 1823
BsrBI	CCGCTC	2 cut(s)	189, 336
BsrDI	GCAATG	4 cut(s)	545, 652, 1148, 1852
BsrFI	RCCGGY	3 cut(s)	221, 1456, 1814
BsrI	ACTGG	2 cut(s)	1258, 1959
BssAI	RCCGGY	3 cut(s)	221, 1456, 1814
BssECI	CCNNGG	2 cut(s)	202, 1415
BssNI	GRCGYC	1 cut(s)	107
BssSI	CACGAG	1 cut(s)	2028
BssT1I	CCWWGG	2 cut(s)	202, 1415
Bst2BI	CACGAG	1 cut(s)	2028
Bst2UI	CCWGG	3 cut(s)	524, 647, 1614
Bst4CI	ACNGT	5 cut(s)	273, 346, 473, 1345, 1700
Bst6I	CTCTTC	6 cut(s)	177, 528, 902, 1505, 1928, 2143
BstACI	GRCGYC	1 cut(s)	107
BstAPI	GCANNNNNTGC	1 cut(s)	1804
BstBI	TTCGAA	1 cut(s)	2040
BstC8I	GCNNGC	5 cut(s)	223, 758, 1093, 1458, 1600
BstDEI	CTNAG	4 cut(s)	360, 1674, 1878, 2064
BstDSI	CCRYGG	1 cut(s)	202
BstF5I	GGATG	5 cut(s)	45, 388, 550, 1110, 1301
BstFNI	CGCG	1 cut(s)	264
BstHHI	GCGC	1 cut(s)	825
BstMAI	GTCTC	4 cut(s)	74, 109, 1579, 1823
BstMCI	CGRYCG	1 cut(s)	95
BstMWI	GCNNNNNNNGC	4 cut(s)	554, 1097, 1804, 1922
BstNI	CCWGG	3 cut(s)	524, 647, 1614
BstNSI	RCATGY	2 cut(s)	986, 1887
BstSCI	CCNGG	3 cut(s)	522, 645, 1612
BstSFI	CTRYAG	4 cut(s)	870, 896, 1227, 1341
BstUI	CGCG	1 cut(s)	264
BstV1I	GCAGC	9 cut(s)	237, 336, 652, 669, 910, 1213, 1589, 1607, 2115
BstX2I	RGATCY	7 cut(s)	166, 172, 911, 1105, 1411, 1742, 1874
BstXI	CCANNNNNNTGG	1 cut(s)	209
BstYI	RGATCY	7 cut(s)	166, 172, 911, 1105, 1411, 1742, 1874
BstZI	CGGCCG	1 cut(s)	92
Bsu15I	ATCGAT	1 cut(s)	2158
Bsu36I	CCTNAGG	1 cut(s)	1674
BsuI	GTATCC	1 cut(s)	1256
BsuRI	GGCC	6 cut(s)	61, 94, 317, 429, 522, 736
BsuTUI	ATCGAT	1 cut(s)	2158
BtgI	CCRYGG	1 cut(s)	202
BtsCI	GGATG	5 cut(s)	45, 388, 550, 1110, 1301
BtsI	GCAGTG	1 cut(s)	1266
BtsIMutI	CAGTG	5 cut(s)	278, 478, 1251, 1266, 1836
Cac8I	GCNNGC	5 cut(s)	223, 758, 1093, 1458, 1600
CciI	TCATGA	1 cut(s)	300
CfoI	GCGC	1 cut(s)	825
Cfr10I	RCCGGY	3 cut(s)	221, 1456, 1814
Cfr13I	GGNCC	2 cut(s)	1419, 1616
ClaI	ATCGAT	1 cut(s)	2158
CseI	GACGC	2 cut(s)	257, 947
Csp6I	GTAC	3 cut(s)	342, 831, 2033
CspAI	ACCGGT	1 cut(s)	1814
CviAII	CATG	9 cut(s)	203, 301, 365, 460, 983, 1279, 1479, 1559, 1884
CviQI	GTAC	3 cut(s)	342, 831, 2033
DdeI	CTNAG	4 cut(s)	360, 1674, 1878, 2064
DraI	TTTAAA	1 cut(s)	930
DrdI	GACNNNNNNGTC	1 cut(s)	1726
DriI	GACNNNNNGTC	1 cut(s)	1614
DseDI	GACNNNNNNGTC	1 cut(s)	1726
EaeI	YGGCCR	2 cut(s)	92, 427
EagI	CGGCCG	1 cut(s)	92
Eam1104I	CTCTTC	6 cut(s)	177, 528, 902, 1505, 1928, 2143
Eam1105I	GACNNNNNGTC	1 cut(s)	1614
EarI	CTCTTC	6 cut(s)	177, 528, 902, 1505, 1928, 2143
EciI	GGCGGA	2 cut(s)	194, 248
Ecl136II	GAGCTC	1 cut(s)	298
EclXI	CGGCCG	1 cut(s)	92
Eco130I	CCWWGG	2 cut(s)	202, 1415
Eco147I	AGGCCT	1 cut(s)	61
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	4 cut(s)	74, 109, 1579, 1823
Eco47I	GGWCC	2 cut(s)	1419, 1616
Eco52I	CGGCCG	1 cut(s)	92
Eco53kI	GAGCTC	1 cut(s)	298
Eco81I	CCTNAGG	1 cut(s)	1674
Eco88I	CYCGRG	1 cut(s)	112
EcoICRI	GAGCTC	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	489
EcoRII	CCWGG	3 cut(s)	522, 645, 1612
EcoT14I	CCWWGG	2 cut(s)	202, 1415
EcoT22I	ATGCAT	1 cut(s)	1889
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	2 cut(s)	202, 1415
FaeI	CATG	9 cut(s)	206, 304, 368, 463, 986, 1282, 1482, 1562, 1887
FalI	AAGNNNNNCTT	2 cut(s)	961, 993
FaqI	GGGAC	2 cut(s)	269, 1304
FatI	CATG	9 cut(s)	202, 300, 364, 459, 982, 1278, 1478, 1558, 1883
FauNDI	CATATG	2 cut(s)	1204, 1580
FblI	GTMKAC	1 cut(s)	468
FokI	GGATG	5 cut(s)	52, 375, 557, 1097, 1288
FriOI	GRGCYC	1 cut(s)	300
FspBI	CTAG	4 cut(s)	1296, 1416, 1746, 1898
FspI	TGCGCA	1 cut(s)	824
GlaI	GCGC	1 cut(s)	824
GsuI	CTGGAG	1 cut(s)	629
HaeIII	GGCC	6 cut(s)	61, 94, 317, 429, 522, 736
HapII	CCGG	9 cut(s)	77, 95, 170, 176, 222, 449, 1422, 1457, 1815
HgaI	GACGC	2 cut(s)	257, 947
HhaI	GCGC	1 cut(s)	825
Hin1I	GRCGYC	1 cut(s)	107
Hin1II	CATG	9 cut(s)	206, 304, 368, 463, 986, 1282, 1482, 1562, 1887
Hin6I	GCGC	1 cut(s)	823
HinP1I	GCGC	1 cut(s)	823
HincII	GTYRAC	1 cut(s)	1731
HindII	GTYRAC	1 cut(s)	1731
HinfI	GANTC	7 cut(s)	614, 866, 884, 1211, 1322, 1609, 1861
HpaII	CCGG	9 cut(s)	77, 95, 170, 176, 222, 449, 1422, 1457, 1815
HphI	GGTGA	5 cut(s)	17, 61, 685, 754, 1870
Hpy188I	TCNGA	5 cut(s)	402, 417, 1350, 1719, 1881
Hpy188III	TCNNGA	7 cut(s)	114, 140, 170, 301, 578, 1289, 1676
Hpy99I	CGWCG	1 cut(s)	109
HpyAV	CCTTC	4 cut(s)	714, 733, 746, 789
HpyCH4III	ACNGT	5 cut(s)	273, 346, 473, 1345, 1700
HpyCH4IV	ACGT	1 cut(s)	107
HpyF10VI	GCNNNNNNNGC	4 cut(s)	554, 1097, 1804, 1922
HpyF3I	CTNAG	4 cut(s)	360, 1674, 1878, 2064
HpySE526I	ACGT	1 cut(s)	107
Hsp92I	GRCGYC	1 cut(s)	107
Hsp92II	CATG	9 cut(s)	206, 304, 368, 463, 986, 1282, 1482, 1562, 1887
HspAI	GCGC	1 cut(s)	823
Kpn2I	TCCGGA	1 cut(s)	169
KroI	GCCGGC	2 cut(s)	221, 1456
KroNI	GCCGGC	2 cut(s)	223, 1458
LguI	GCTCTTC	1 cut(s)	528
LmnI	GCTCC	5 cut(s)	218, 333, 503, 648, 859
Lsp1109I	GCAGC	9 cut(s)	237, 336, 652, 669, 910, 1213, 1589, 1607, 2115
LweI	GCATC	3 cut(s)	30, 535, 2021
MaeI	CTAG	4 cut(s)	1296, 1416, 1746, 1898
MaeII	ACGT	1 cut(s)	107
MaeIII	GTNAC	1 cut(s)	1900
MbiI	CCGCTC	2 cut(s)	189, 336
MflI	RGATCY	7 cut(s)	166, 172, 911, 1105, 1411, 1742, 1874
MhlI	GDGCHC	4 cut(s)	300, 1253, 1800, 2070
MlsI	TGGCCA	1 cut(s)	429
MluNI	TGGCCA	1 cut(s)	429
MlyI	GAGTC	1 cut(s)	1603
MmeI	TCCRAC	4 cut(s)	17, 196, 440, 1263
Mox20I	TGGCCA	1 cut(s)	429
Mph1103I	ATGCAT	1 cut(s)	1889
MroI	TCCGGA	1 cut(s)	169
MroNI	GCCGGC	2 cut(s)	221, 1456
MroXI	GAANNNNTTC	3 cut(s)	135, 1387, 1865
MscI	TGGCCA	1 cut(s)	429
MseI	TTAA	4 cut(s)	564, 929, 1890, 2088
MslI	CAYNNNNRTG	4 cut(s)	207, 393, 1056, 1907
Msp20I	TGGCCA	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	228, 1598
MspI	CCGG	9 cut(s)	77, 95, 170, 176, 222, 449, 1422, 1457, 1815
MspR9I	CCNGG	3 cut(s)	524, 647, 1614
Mva1269I	GAATGC	1 cut(s)	1134
MvaI	CCWGG	3 cut(s)	524, 647, 1614
MvnI	CGCG	1 cut(s)	264
MwoI	GCNNNNNNNGC	4 cut(s)	554, 1097, 1804, 1922
NaeI	GCCGGC	2 cut(s)	223, 1458
NcoI	CCATGG	1 cut(s)	202
NdeI	CATATG	2 cut(s)	1204, 1580
NgoMIV	GCCGGC	2 cut(s)	221, 1456
NlaIII	CATG	9 cut(s)	206, 304, 368, 463, 986, 1282, 1482, 1562, 1887
NlaIV	GGNNCC	4 cut(s)	168, 174, 220, 1018
NmuCI	GTSAC	1 cut(s)	1900
NsbI	TGCGCA	1 cut(s)	824
NsiI	ATGCAT	1 cut(s)	1889
NspI	RCATGY	2 cut(s)	986, 1887
NspV	TTCGAA	1 cut(s)	2040
OliI	CACNNNNGTG	1 cut(s)	1907
PaeR7I	CTCGAG	1 cut(s)	112
PagI	TCATGA	1 cut(s)	300
PceI	AGGCCT	1 cut(s)	61
PciI	ACATGT	1 cut(s)	982
PciSI	GCTCTTC	1 cut(s)	528
PcsI	WCGNNNNNNNCGW	1 cut(s)	110
PctI	GAATGC	1 cut(s)	1134
PdiI	GCCGGC	2 cut(s)	223, 1458
PdmI	GAANNNNTTC	3 cut(s)	135, 1387, 1865
PfeI	GAWTC	6 cut(s)	614, 866, 884, 1211, 1322, 1861
PflMI	CCANNNNNTGG	1 cut(s)	956
PfoI	TCCNGGA	1 cut(s)	645
PinAI	ACCGGT	1 cut(s)	1814
PleI	GAGTC	1 cut(s)	1603
PpsI	GAGTC	1 cut(s)	1603
PscI	ACATGT	1 cut(s)	982
PshBI	ATTAAT	2 cut(s)	564, 2088
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	3 cut(s)	522, 645, 1612
PspGI	CCWGG	3 cut(s)	522, 645, 1612
PspN4I	GGNNCC	4 cut(s)	168, 174, 220, 1018
PspPI	GGNCC	2 cut(s)	1419, 1616
PstI	CTGCAG	2 cut(s)	900, 1231
PsuI	RGATCY	7 cut(s)	166, 172, 911, 1105, 1411, 1742, 1874
PvuII	CAGCTG	1 cut(s)	1598
RsaI	GTAC	3 cut(s)	343, 832, 2034
RsaNI	GTAC	3 cut(s)	342, 831, 2033
RseI	CAYNNNNRTG	4 cut(s)	207, 393, 1056, 1907
SacI	GAGCTC	1 cut(s)	300
SapI	GCTCTTC	1 cut(s)	528
SaqAI	TTAA	4 cut(s)	564, 929, 1890, 2088
Sau96I	GGNCC	2 cut(s)	1419, 1616
ScaI	AGTACT	1 cut(s)	343
SchI	GAGTC	1 cut(s)	1603
ScrFI	CCNGG	3 cut(s)	524, 647, 1614
SduI	GDGCHC	4 cut(s)	300, 1253, 1800, 2070
SfaNI	GCATC	3 cut(s)	30, 535, 2021
SfcI	CTRYAG	4 cut(s)	870, 896, 1227, 1341
Sfr274I	CTCGAG	1 cut(s)	112
SfuI	TTCGAA	1 cut(s)	2040
SinI	GGWCC	2 cut(s)	1419, 1616
SlaI	CTCGAG	1 cut(s)	112
SmiMI	CAYNNNNRTG	4 cut(s)	207, 393, 1056, 1907
SmlI	CTYRAG	3 cut(s)	112, 967, 1620
SmoI	CTYRAG	3 cut(s)	112, 967, 1620
SseBI	AGGCCT	1 cut(s)	61
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	4 cut(s)	1296, 1416, 1746, 1898
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	1 cut(s)	61
StyD4I	CCNGG	3 cut(s)	522, 645, 1612
StyI	CCWWGG	2 cut(s)	202, 1415
TaaI	ACNGT	5 cut(s)	273, 346, 473, 1345, 1700
TaiI	ACGT	1 cut(s)	110
TaqI	TCGA	9 cut(s)	104, 113, 487, 687, 837, 1391, 1869, 2040, 2158
TatI	WGTACW	2 cut(s)	341, 830
TauI	GCSGC	2 cut(s)	231, 264
TfiI	GAWTC	6 cut(s)	614, 866, 884, 1211, 1322, 1861
Tru1I	TTAA	4 cut(s)	564, 929, 1890, 2088
Tru9I	TTAA	4 cut(s)	564, 929, 1890, 2088
TscAI	CASTG	5 cut(s)	278, 478, 1258, 1273, 1843
TseFI	GTSAC	1 cut(s)	1900
TseI	GCWGC	9 cut(s)	225, 349, 640, 657, 898, 1226, 1595, 1602, 2103
Tsp45I	GTSAC	1 cut(s)	1900
TspDTI	ATGAA	4 cut(s)	363, 381, 1022, 1074
TspGWI	ACGGA	2 cut(s)	260, 1103
TspRI	CASTG	5 cut(s)	278, 478, 1258, 1273, 1843
Van91I	CCANNNNNTGG	1 cut(s)	956
VpaK11BI	GGWCC	2 cut(s)	1419, 1616
VspI	ATTAAT	2 cut(s)	564, 2088
XapI	RAATTY	9 cut(s)	86, 99, 135, 368, 489, 931, 1036, 1426, 1531
XceI	RCATGY	2 cut(s)	986, 1887
XhoI	CTCGAG	1 cut(s)	112
XmaJI	CCTAGG	1 cut(s)	1415
XmiI	GTMKAC	1 cut(s)	468
XmnI	GAANNNNTTC	3 cut(s)	135, 1387, 1865
XspI	CTAG	4 cut(s)	1296, 1416, 1746, 1898
ZraI	GACGTC	1 cut(s)	108
ZrmI	AGTACT	1 cut(s)	343
Zsp2I	ATGCAT	1 cut(s)	1889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.