Permuted single zf-CXXC unit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36490 |
| fragaria_vesca | FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_6g17860 |
| malus_domestica | MD12G1017600.v1.1 MD14G1015300.v1.1 |
| prunus_persica | Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 |
| pyrus_communis | pycom12g01420 pycom12g01430 pycom12g01450 pycom14g01290 pycom14g01300 |
| rosa_chinensis | RchiOBHm_Chr3g0472091 |
| rosa_laevigata | RLG00000024104 |
| rosa_multiflora | Rmu_sc0002532.1_g000017 |
| rosa_roxburghii | Rroxscaffold_6G00409250 |
| rosa_rugosa | Rorug03G0122100 |
| rosa_samantha | Rh3AG174000 Rh3AG174100 Rh3BG199400 Rh3CG190400 Rh3CG190500 Rh3CG197800 Rh3CG197900 Rh3DG175100 |
| rosa_wichuraiana | Rw3G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 173 |
| AarI | CACCTGC | 1 cut(s) | 454 |
| Acc36I | ACCTGC | 2 cut(s) | 454, 999 |
| Acc65I | GGTACC | 1 cut(s) | 3982 |
| AccB1I | GGYRCC | 1 cut(s) | 3982 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 610, 992, 4369, 4970 |
| AccI | GTMKAC | 2 cut(s) | 501, 938 |
| AccII | CGCG | 1 cut(s) | 195 |
| AciI | CCGC | 5 cut(s) | 856, 3907, 3970, 4814, 5027 |
| AclI | AACGTT | 1 cut(s) | 1551 |
| AclWI | GGATC | 9 cut(s) | 198, 1379, 2189, 2914, 2930, 2943, 2976, 4490, 4748 |
| AcoI | YGGCCR | 3 cut(s) | 460, 4067, 5205 |
| AcuI | CTGAAG | 5 cut(s) | 174, 231, 953, 2543, 4293 |
| AcvI | CACGTG | 1 cut(s) | 1328 |
| AdeI | CACNNNGTG | 2 cut(s) | 1811, 4790 |
| AfaI | GTAC | 9 cut(s) | 168, 244, 916, 1469, 2175, 3273, 3984, 4034, 5078 |
| AflIII | ACRYGT | 2 cut(s) | 3051, 3095 |
| AjiI | CACGTC | 3 cut(s) | 1882, 2357, 5195 |
| AjnI | CCWGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| AleI | CACNNNNGTG | 3 cut(s) | 1880, 3807, 4075 |
| Alw21I | GWGCWC | 7 cut(s) | 306, 678, 1256, 1773, 2043, 2218, 3572 |
| AlwI | GGATC | 9 cut(s) | 198, 1379, 2189, 2914, 2930, 2943, 2976, 4490, 4748 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3254, 4628 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2174, 2206 |
| AseI | ATTAAT | 1 cut(s) | 5201 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1192, 1360, 4050 |
| Asp718I | GGTACC | 1 cut(s) | 3982 |
| AspS9I | GGNCC | 8 cut(s) | 768, 960, 1392, 1589, 1724, 3358, 4241, 5189 |
| AsuHPI | GGTGA | 4 cut(s) | 374, 1786, 4601, 4802 |
| AvaII | GGWCC | 2 cut(s) | 1589, 1724 |
| AxyI | CCTNAGG | 1 cut(s) | 4335 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1670, 1703, 2157, 2190 |
| BalI | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| BamHI | GGATCC | 1 cut(s) | 2935 |
| BanI | GGYRCC | 1 cut(s) | 3982 |
| BanII | GRGCYC | 4 cut(s) | 306, 678, 2136, 3888 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 15, 47 |
| BauI | CACGAG | 2 cut(s) | 493, 5184 |
| BbrPI | CACGTG | 1 cut(s) | 1328 |
| BbsI | GAAGAC | 3 cut(s) | 3222, 4132, 4488 |
| Bbv12I | GWGCWC | 7 cut(s) | 306, 678, 1256, 1773, 2043, 2218, 3572 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3218, 3252, 4982, 5016 |
| BciT130I | CCWGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| BciVI | GTATCC | 2 cut(s) | 1219, 4352 |
| BclI | TGATCA | 1 cut(s) | 2236 |
| BfmI | CTRYAG | 3 cut(s) | 2629, 3476, 3989 |
| BfuAI | ACCTGC | 2 cut(s) | 454, 999 |
| BfuI | GTATCC | 2 cut(s) | 1219, 4352 |
| BglII | AGATCT | 3 cut(s) | 625, 1715, 5042 |
| BlpI | GCTNAGC | 1 cut(s) | 3866 |
| BmcAI | AGTACT | 1 cut(s) | 168 |
| Bme1390I | CCNGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| Bme18I | GGWCC | 2 cut(s) | 1589, 1724 |
| BmgBI | CACGTC | 3 cut(s) | 1882, 2357, 5195 |
| BmgT120I | GGNCC | 8 cut(s) | 768, 960, 1392, 1589, 1724, 3358, 4241, 5189 |
| BmiI | GGNNCC | 6 cut(s) | 276, 335, 1348, 2937, 3984, 5086 |
| BmrFI | CCNGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| BmrI | ACTGGG | 3 cut(s) | 3355, 3890, 4031 |
| BmuI | ACTGGG | 3 cut(s) | 3355, 3890, 4031 |
| BoxI | GACNNNNGTC | 1 cut(s) | 417 |
| BpiI | GAAGAC | 3 cut(s) | 3222, 4132, 4488 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1776, 1808, 2906, 2938, 4908, 4940 |
| BpmI | CTGGAG | 4 cut(s) | 255, 662, 1983, 3477 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3224, 3411 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3866 |
| BpuEI | CTTGAG | 3 cut(s) | 1632, 3023, 4821 |
| BsaAI | YACGTR | 1 cut(s) | 1328 |
| BsaI | GGTCTC | 2 cut(s) | 1552, 3455 |
| BsaWI | WCCGGW | 1 cut(s) | 3937 |
| Bse1I | ACTGG | 7 cut(s) | 238, 2148, 3258, 3361, 3795, 3885, 4037 |
| Bse21I | CCTNAGG | 1 cut(s) | 4335 |
| Bse3DI | GCAATG | 6 cut(s) | 578, 1063, 3995, 4174, 4953, 5141 |
| BseBI | CCWGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| BseMI | GCAATG | 6 cut(s) | 578, 1063, 3995, 4174, 4953, 5141 |
| BseNI | ACTGG | 7 cut(s) | 238, 2148, 3258, 3361, 3795, 3885, 4037 |
| BseRI | GAGGAG | 6 cut(s) | 296, 581, 876, 2837, 4200, 4262 |
| BseYI | CCCAGC | 3 cut(s) | 329, 379, 5221 |
| Bsh1236I | CGCG | 1 cut(s) | 195 |
| BshNI | GGYRCC | 1 cut(s) | 3982 |
| BsiHKAI | GWGCWC | 7 cut(s) | 306, 678, 1256, 1773, 2043, 2218, 3572 |
| BsiSI | CCGG | 2 cut(s) | 104, 3938 |
| BslFI | GGGAC | 1 cut(s) | 3623 |
| BsmFI | GGGAC | 1 cut(s) | 3623 |
| BsmI | GAATGC | 5 cut(s) | 868, 2385, 2492, 2741, 4323 |
| Bso31I | GGTCTC | 2 cut(s) | 1552, 3455 |
| Bsp1286I | GDGCHC | 9 cut(s) | 306, 678, 1256, 1773, 2043, 2136, 2218, 3572, 3888 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3866 |
| Bsp19I | CCATGG | 3 cut(s) | 220, 2350, 2414 |
| Bsp68I | TCGCGA | 1 cut(s) | 195 |
| BspACI | CCGC | 5 cut(s) | 856, 3907, 3970, 4814, 5027 |
| BspFNI | CGCG | 1 cut(s) | 195 |
| BspLI | GGNNCC | 6 cut(s) | 276, 335, 1348, 2937, 3984, 5086 |
| BspMAI | CTGCAG | 2 cut(s) | 2633, 3480 |
| BspMI | ACCTGC | 2 cut(s) | 454, 999 |
| BspPI | GGATC | 9 cut(s) | 198, 1379, 2189, 2914, 2930, 2943, 2976, 4490, 4748 |
| BspQI | GCTCTTC | 3 cut(s) | 52, 2328, 4239 |
| BspT107I | GGYRCC | 1 cut(s) | 3982 |
| BspTNI | GGTCTC | 2 cut(s) | 1552, 3455 |
| BsrDI | GCAATG | 6 cut(s) | 578, 1063, 3995, 4174, 4953, 5141 |
| BsrI | ACTGG | 7 cut(s) | 238, 2148, 3258, 3361, 3795, 3885, 4037 |
| BssSI | CACGAG | 2 cut(s) | 493, 5184 |
| BssT1I | CCWWGG | 7 cut(s) | 220, 771, 833, 1388, 2350, 2414, 3678 |
| Bst2BI | CACGAG | 2 cut(s) | 493, 5184 |
| Bst2UI | CCWGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 587, 1777, 1895, 2389, 3254, 4229 |
| BstBAI | YACGTR | 1 cut(s) | 1328 |
| BstDSI | CCRYGG | 4 cut(s) | 220, 278, 2350, 2414 |
| BstEII | GGTNACC | 1 cut(s) | 3083 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| BstFNI | CGCG | 1 cut(s) | 195 |
| BstNI | CCWGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| BstNSI | RCATGY | 6 cut(s) | 659, 1860, 2550, 3055, 3099, 4176 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 417 |
| BstPI | GGTNACC | 1 cut(s) | 3083 |
| BstSCI | CCNGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| BstSFI | CTRYAG | 3 cut(s) | 2629, 3476, 3989 |
| BstUI | CGCG | 1 cut(s) | 195 |
| BstV2I | GAAGAC | 3 cut(s) | 3222, 4132, 4488 |
| BstX2I | RGATCY | 5 cut(s) | 625, 1384, 1715, 2935, 5042 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 227, 2143, 5046 |
| BstYI | RGATCY | 5 cut(s) | 625, 1384, 1715, 2935, 5042 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4335 |
| BsuI | GTATCC | 2 cut(s) | 1219, 4352 |
| BtgI | CCRYGG | 4 cut(s) | 220, 278, 2350, 2414 |
| BtgZI | GCGATG | 1 cut(s) | 2356 |
| BtrI | CACGTC | 3 cut(s) | 1882, 2357, 5195 |
| BtsI | GCAGTG | 5 cut(s) | 381, 650, 1148, 3917, 4007 |
| BtuMI | TCGCGA | 1 cut(s) | 195 |
| BveI | ACCTGC | 2 cut(s) | 454, 999 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3254, 4628 |
| Cfr13I | GGNCC | 8 cut(s) | 768, 960, 1392, 1589, 1724, 3358, 4241, 5189 |
| CseI | GACGC | 1 cut(s) | 2412 |
| CsiI | ACCWGGT | 2 cut(s) | 2761, 4786 |
| Csp6I | GTAC | 9 cut(s) | 167, 243, 915, 1468, 2174, 3272, 3983, 4033, 5077 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2965, 3000 |
| CviQI | GTAC | 9 cut(s) | 167, 243, 915, 1468, 2174, 3272, 3983, 4033, 5077 |
| DraI | TTTAAA | 3 cut(s) | 3201, 3501, 5107 |
| DraIII | CACNNNGTG | 2 cut(s) | 1811, 4790 |
| EaeI | YGGCCR | 3 cut(s) | 460, 4067, 5205 |
| Ecl136II | GAGCTC | 2 cut(s) | 304, 676 |
| Eco130I | CCWWGG | 7 cut(s) | 220, 771, 833, 1388, 2350, 2414, 3678 |
| Eco147I | AGGCCT | 1 cut(s) | 82 |
| Eco24I | GRGCYC | 4 cut(s) | 306, 678, 2136, 3888 |
| Eco31I | GGTCTC | 2 cut(s) | 1552, 3455 |
| Eco47I | GGWCC | 2 cut(s) | 1589, 1724 |
| Eco53kI | GAGCTC | 2 cut(s) | 304, 676 |
| Eco57I | CTGAAG | 5 cut(s) | 174, 231, 953, 2543, 4293 |
| Eco72I | CACGTG | 1 cut(s) | 1328 |
| Eco81I | CCTNAGG | 1 cut(s) | 4335 |
| Eco91I | GGTNACC | 1 cut(s) | 3083 |
| EcoICRI | GAGCTC | 2 cut(s) | 304, 676 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| EcoO109I | RGGNCCY | 2 cut(s) | 960, 1724 |
| EcoO65I | GGTNACC | 1 cut(s) | 3083 |
| EcoRI | GAATTC | 4 cut(s) | 288, 398, 1045, 2605 |
| EcoRII | CCWGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| EcoT14I | CCWWGG | 7 cut(s) | 220, 771, 833, 1388, 2350, 2414, 3678 |
| EcoT22I | ATGCAT | 5 cut(s) | 1862, 2385, 2548, 3435, 4174 |
| EcoT38I | GRGCYC | 4 cut(s) | 306, 678, 2136, 3888 |
| ErhI | CCWWGG | 7 cut(s) | 220, 771, 833, 1388, 2350, 2414, 3678 |
| FaqI | GGGAC | 1 cut(s) | 3623 |
| FauI | CCCGC | 1 cut(s) | 5034 |
| FauNDI | CATATG | 2 cut(s) | 270, 457 |
| FbaI | TGATCA | 1 cut(s) | 2236 |
| FblI | GTMKAC | 2 cut(s) | 501, 938 |
| FriOI | GRGCYC | 4 cut(s) | 306, 678, 2136, 3888 |
| GsaI | CCCAGC | 3 cut(s) | 333, 383, 5225 |
| GsuI | CTGGAG | 4 cut(s) | 255, 662, 1983, 3477 |
| HapII | CCGG | 2 cut(s) | 104, 3938 |
| HgaI | GACGC | 1 cut(s) | 2412 |
| HincII | GTYRAC | 5 cut(s) | 1704, 2230, 2677, 2781, 4990 |
| HindII | GTYRAC | 5 cut(s) | 1704, 2230, 2677, 2781, 4990 |
| HindIII | AAGCTT | 6 cut(s) | 636, 1662, 2261, 2566, 4082, 4602 |
| HpaI | GTTAAC | 2 cut(s) | 2677, 4990 |
| HpaII | CCGG | 2 cut(s) | 104, 3938 |
| HphI | GGTGA | 4 cut(s) | 374, 1786, 4601, 4802 |
| Hpy99I | CGWCG | 1 cut(s) | 2214 |
| HpyAV | CCTTC | 9 cut(s) | 747, 779, 951, 1188, 2282, 2413, 2995, 3074, 3636 |
| HpyCH4IV | ACGT | 8 cut(s) | 418, 1327, 1551, 1881, 2209, 2356, 3958, 5194 |
| HpySE526I | ACGT | 8 cut(s) | 418, 1327, 1551, 1881, 2209, 2356, 3958, 5194 |
| KpnI | GGTACC | 1 cut(s) | 3986 |
| Ksp22I | TGATCA | 1 cut(s) | 2236 |
| KspAI | GTTAAC | 2 cut(s) | 2677, 4990 |
| LguI | GCTCTTC | 3 cut(s) | 52, 2328, 4239 |
| LmnI | GCTCC | 9 cut(s) | 224, 236, 280, 309, 568, 681, 910, 3415, 4956 |
| MabI | ACCWGGT | 2 cut(s) | 2761, 4786 |
| MaeII | ACGT | 8 cut(s) | 418, 1327, 1551, 1881, 2209, 2356, 3958, 5194 |
| MfeI | CAATTG | 3 cut(s) | 55, 4013, 4367 |
| MflI | RGATCY | 5 cut(s) | 625, 1384, 1715, 2935, 5042 |
| MhlI | GDGCHC | 9 cut(s) | 306, 678, 1256, 1773, 2043, 2136, 2218, 3572, 3888 |
| MlsI | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| MluNI | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| MlyI | GAGTC | 4 cut(s) | 263, 2357, 3500, 4013 |
| MmeI | TCCRAC | 8 cut(s) | 2222, 2425, 2542, 3934, 4332, 4664, 4713, 4919 |
| Mox20I | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| Mph1103I | ATGCAT | 5 cut(s) | 1862, 2385, 2548, 3435, 4174 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1192, 1360, 4050 |
| MscI | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1880, 2355, 2652, 3807, 4075 |
| Msp20I | TGGCCA | 3 cut(s) | 462, 4069, 5207 |
| MspI | CCGG | 2 cut(s) | 104, 3938 |
| MspR9I | CCNGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| MunI | CAATTG | 3 cut(s) | 55, 4013, 4367 |
| Mva1269I | GAATGC | 5 cut(s) | 868, 2385, 2492, 2741, 4323 |
| MvaI | CCWGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| MvnI | CGCG | 1 cut(s) | 195 |
| NcoI | CCATGG | 3 cut(s) | 220, 2350, 2414 |
| NdeI | CATATG | 2 cut(s) | 270, 457 |
| NlaIV | GGNNCC | 6 cut(s) | 276, 335, 1348, 2937, 3984, 5086 |
| NmuCI | GTSAC | 8 cut(s) | 1146, 1298, 1739, 1873, 2499, 2624, 4005, 4856 |
| NruI | TCGCGA | 1 cut(s) | 195 |
| NsiI | ATGCAT | 5 cut(s) | 1862, 2385, 2548, 3435, 4174 |
| NspI | RCATGY | 6 cut(s) | 659, 1860, 2550, 3055, 3099, 4176 |
| OliI | CACNNNNGTG | 3 cut(s) | 1880, 3807, 4075 |
| PaeI | GCATGC | 2 cut(s) | 659, 2550 |
| PaqCI | CACCTGC | 1 cut(s) | 454 |
| PceI | AGGCCT | 1 cut(s) | 82 |
| PciI | ACATGT | 2 cut(s) | 3051, 3095 |
| PciSI | GCTCTTC | 3 cut(s) | 52, 2328, 4239 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 947, 2215, 5191 |
| PctI | GAATGC | 5 cut(s) | 868, 2385, 2492, 2741, 4323 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1192, 1360, 4050 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 610, 992, 4369, 4970 |
| PfoI | TCCNGGA | 1 cut(s) | 678 |
| PleI | GAGTC | 4 cut(s) | 262, 2357, 3499, 4012 |
| PmaCI | CACGTG | 1 cut(s) | 1328 |
| PmlI | CACGTG | 1 cut(s) | 1328 |
| PpsI | GAGTC | 4 cut(s) | 262, 2357, 3499, 4012 |
| Ppu21I | YACGTR | 1 cut(s) | 1328 |
| PpuMI | RGGWCCY | 1 cut(s) | 1724 |
| PscI | ACATGT | 2 cut(s) | 3051, 3095 |
| PshAI | GACNNNNGTC | 1 cut(s) | 417 |
| PshBI | ATTAAT | 1 cut(s) | 5201 |
| PsiI | TTATAA | 1 cut(s) | 173 |
| Psp124BI | GAGCTC | 2 cut(s) | 306, 678 |
| Psp1406I | AACGTT | 1 cut(s) | 1551 |
| Psp5II | RGGWCCY | 1 cut(s) | 1724 |
| Psp6I | CCWGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| PspCI | CACGTG | 1 cut(s) | 1328 |
| PspEI | GGTNACC | 1 cut(s) | 3083 |
| PspFI | CCCAGC | 3 cut(s) | 329, 379, 5221 |
| PspGI | CCWGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| PspN4I | GGNNCC | 6 cut(s) | 276, 335, 1348, 2937, 3984, 5086 |
| PspPI | GGNCC | 8 cut(s) | 768, 960, 1392, 1589, 1724, 3358, 4241, 5189 |
| PspPPI | RGGWCCY | 1 cut(s) | 1724 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4273, 4305 |
| PstI | CTGCAG | 2 cut(s) | 2633, 3480 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3254, 4628 |
| PsuI | RGATCY | 5 cut(s) | 625, 1384, 1715, 2935, 5042 |
| RruI | TCGCGA | 1 cut(s) | 195 |
| RsaI | GTAC | 9 cut(s) | 168, 244, 916, 1469, 2175, 3273, 3984, 4034, 5078 |
| RsaNI | GTAC | 9 cut(s) | 167, 243, 915, 1468, 2174, 3272, 3983, 4033, 5077 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1880, 2355, 2652, 3807, 4075 |
| SacI | GAGCTC | 2 cut(s) | 306, 678 |
| SapI | GCTCTTC | 3 cut(s) | 52, 2328, 4239 |
| Sau96I | GGNCC | 8 cut(s) | 768, 960, 1392, 1589, 1724, 3358, 4241, 5189 |
| ScaI | AGTACT | 1 cut(s) | 168 |
| SchI | GAGTC | 4 cut(s) | 263, 2357, 3500, 4013 |
| ScrFI | CCNGG | 7 cut(s) | 557, 680, 816, 987, 2763, 4239, 4788 |
| SduI | GDGCHC | 9 cut(s) | 306, 678, 1256, 1773, 2043, 2136, 2218, 3572, 3888 |
| SexAI | ACCWGGT | 2 cut(s) | 2761, 4786 |
| SfcI | CTRYAG | 3 cut(s) | 2629, 3476, 3989 |
| SinI | GGWCC | 2 cut(s) | 1589, 1724 |
| SmiI | ATTTAAAT | 1 cut(s) | 3501 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1880, 2355, 2652, 3807, 4075 |
| SmlI | CTYRAG | 3 cut(s) | 1647, 3038, 4836 |
| SmoI | CTYRAG | 3 cut(s) | 1647, 3038, 4836 |
| SphI | GCATGC | 2 cut(s) | 659, 2550 |
| SseBI | AGGCCT | 1 cut(s) | 82 |
| SsiI | CCGC | 5 cut(s) | 856, 3907, 3970, 4814, 5027 |
| SspI | AATATT | 3 cut(s) | 1675, 3405, 4061 |
| SstI | GAGCTC | 2 cut(s) | 306, 678 |
| StuI | AGGCCT | 1 cut(s) | 82 |
| StyD4I | CCNGG | 7 cut(s) | 555, 678, 814, 985, 2761, 4237, 4786 |
| StyI | CCWWGG | 7 cut(s) | 220, 771, 833, 1388, 2350, 2414, 3678 |
| SwaI | ATTTAAAT | 1 cut(s) | 3501 |
| TaiI | ACGT | 8 cut(s) | 421, 1330, 1554, 1884, 2212, 2359, 3961, 5197 |
| TaqI | TCGA | 3 cut(s) | 2212, 4026, 5015 |
| TatI | WGTACW | 4 cut(s) | 166, 242, 3271, 5076 |
| TauI | GCSGC | 2 cut(s) | 3910, 3973 |
| TseFI | GTSAC | 8 cut(s) | 1146, 1298, 1739, 1873, 2499, 2624, 4005, 4856 |
| Tsp45I | GTSAC | 8 cut(s) | 1146, 1298, 1739, 1873, 2499, 2624, 4005, 4856 |
| TspGWI | ACGGA | 6 cut(s) | 267, 414, 914, 1455, 2313, 2694 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 610, 992, 4369, 4970 |
| VpaK11BI | GGWCC | 2 cut(s) | 1589, 1724 |
| VspI | ATTAAT | 1 cut(s) | 5201 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1006 |
| XbaI | TCTAGA | 3 cut(s) | 1718, 3317, 4717 |
| XceI | RCATGY | 6 cut(s) | 659, 1860, 2550, 3055, 3099, 4176 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2558, 3368 |
| XmiI | GTMKAC | 2 cut(s) | 501, 938 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1192, 1360, 4050 |
| ZrmI | AGTACT | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 5 cut(s) | 1862, 2385, 2548, 3435, 4174 |