Permuted single zf-CXXC unit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36490 |
| fragaria_vesca | FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_3g04410 FvH4_6g17860 |
| malus_domestica | MD12G1017600.v1.1 MD14G1015300.v1.1 |
| prunus_persica | Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 Prupe.7G118000_v2.0.a1 |
| pyrus_communis | pycom12g01420 pycom12g01430 pycom12g01450 pycom14g01290 pycom14g01300 |
| rosa_chinensis | RchiOBHm_Chr3g0472091 |
| rosa_laevigata | RLG00000024104 |
| rosa_multiflora | Rmu_sc0002532.1_g000017 |
| rosa_roxburghii | Rroxscaffold_6G00409250 |
| rosa_rugosa | Rorug03G0122100 |
| rosa_samantha | Rh3AG174000 Rh3AG174100 Rh3BG199400 Rh3CG190400 Rh3CG190500 Rh3CG197800 Rh3CG197900 Rh3DG175100 |
| rosa_wichuraiana | Rw3G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 123 |
| Acc36I | ACCTGC | 2 cut(s) | 3094, 4902 |
| Acc65I | GGTACC | 2 cut(s) | 3640, 4612 |
| AccB1I | GGYRCC | 3 cut(s) | 3640, 4612, 4655 |
| AccBSI | CCGCTC | 1 cut(s) | 2760 |
| AccI | GTMKAC | 3 cut(s) | 220, 2797, 3853 |
| AciI | CCGC | 4 cut(s) | 590, 2433, 2760, 3487 |
| AclWI | GGATC | 9 cut(s) | 405, 827, 1089, 1102, 1651, 1850, 2092, 2628, 4430 |
| AcoI | YGGCCR | 5 cut(s) | 352, 1874, 3725, 4455, 4917 |
| AcuI | CTGAAG | 4 cut(s) | 1560, 2204, 3153, 3632 |
| AdeI | CACNNNGTG | 2 cut(s) | 2285, 4472 |
| AflII | CTTAAG | 1 cut(s) | 4334 |
| AflIII | ACRYGT | 1 cut(s) | 2600 |
| AgeI | ACCGGT | 1 cut(s) | 3444 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2140 |
| AhlI | ACTAGT | 3 cut(s) | 1013, 2258, 2366 |
| AjiI | CACGTC | 1 cut(s) | 4877 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1787, 1819 |
| Alw21I | GWGCWC | 8 cut(s) | 767, 967, 1434, 2258, 2840, 4142, 4365, 4573 |
| Alw26I | GTCTC | 8 cut(s) | 335, 1300, 1325, 1460, 1898, 2573, 3048, 3131 |
| Alw44I | GTGCAC | 4 cut(s) | 763, 2254, 4138, 4569 |
| AlwI | GGATC | 9 cut(s) | 405, 827, 1089, 1102, 1651, 1850, 2092, 2628, 4430 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 338, 2933, 4310 |
| Ama87I | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| ApaI | GGGCCC | 1 cut(s) | 3903 |
| ApaLI | GTGCAC | 4 cut(s) | 763, 2254, 4138, 4569 |
| AsiGI | ACCGGT | 1 cut(s) | 3444 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 895, 1108 |
| Asp718I | GGTACC | 2 cut(s) | 3640, 4612 |
| AspLEI | GCGC | 2 cut(s) | 1955, 3869 |
| AspS9I | GGNCC | 9 cut(s) | 170, 232, 621, 2430, 3899, 3900, 4177, 4871, 4888 |
| AsuC2I | CCSGG | 3 cut(s) | 2904, 3695, 4891 |
| AsuHPI | GGTGA | 9 cut(s) | 640, 1019, 1559, 2673, 3572, 3971, 4010, 4116, 4484 |
| AvaI | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| AvaII | GGWCC | 4 cut(s) | 170, 2430, 4177, 4871 |
| BaeGI | GKGCMC | 5 cut(s) | 767, 2258, 3903, 4142, 4573 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1818, 1851, 3594, 3627 |
| BalI | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| BamHI | GGATCC | 1 cut(s) | 1094 |
| BanI | GGYRCC | 3 cut(s) | 3640, 4612, 4655 |
| BanII | GRGCYC | 3 cut(s) | 967, 1137, 3903 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1573, 1605 |
| BbsI | GAAGAC | 5 cut(s) | 2484, 2901, 3238, 3790, 4161 |
| Bbv12I | GWGCWC | 8 cut(s) | 767, 967, 1434, 2258, 2840, 4142, 4365, 4573 |
| BccI | CCATC | 7 cut(s) | 998, 1817, 1952, 2145, 3591, 3630, 4957 |
| BceAI | ACGGC | 2 cut(s) | 3644, 4669 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 175, 209, 2142, 2176, 2707, 2741, 4664, 4698 |
| BclI | TGATCA | 4 cut(s) | 1705, 2974, 4687, 4855 |
| BcnI | CCSGG | 3 cut(s) | 2904, 3695, 4891 |
| BcoDI | GTCTC | 8 cut(s) | 335, 1300, 1325, 1460, 1898, 2573, 3048, 3131 |
| BcuI | ACTAGT | 3 cut(s) | 1013, 2258, 2366 |
| BfmI | CTRYAG | 5 cut(s) | 498, 939, 987, 1048, 3668 |
| BfoI | RGCGCY | 1 cut(s) | 1956 |
| BfrI | CTTAAG | 1 cut(s) | 4334 |
| BfuAI | ACCTGC | 2 cut(s) | 3094, 4902 |
| BlpI | GCTNAGC | 3 cut(s) | 2230, 3255, 3524 |
| BmcAI | AGTACT | 1 cut(s) | 3719 |
| Bme18I | GGWCC | 4 cut(s) | 170, 2430, 4177, 4871 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2140 |
| BmeT110I | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| BmgBI | CACGTC | 1 cut(s) | 4877 |
| BmgT120I | GGNCC | 9 cut(s) | 170, 232, 621, 2430, 3899, 3900, 4177, 4871, 4888 |
| BmrI | ACTGGG | 5 cut(s) | 764, 3274, 3352, 3548, 4898 |
| BmuI | ACTGGG | 5 cut(s) | 764, 3274, 3352, 3548, 4898 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4078 |
| BpiI | GAAGAC | 5 cut(s) | 2484, 2901, 3238, 3790, 4161 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2558, 2590, 4590, 4622 |
| BpmI | CTGGAG | 3 cut(s) | 518, 1427, 4482 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4329 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 2230, 3255, 3524 |
| BpuEI | CTTGAG | 3 cut(s) | 2503, 4503, 4724 |
| BpuMI | CCSGG | 3 cut(s) | 2904, 3695, 4891 |
| Bsa29I | ATCGAT | 1 cut(s) | 4405 |
| BsaAI | YACGTR | 2 cut(s) | 3082, 3945 |
| BsaI | GGTCTC | 2 cut(s) | 335, 3131 |
| BsaJI | CCNNGG | 9 cut(s) | 624, 900, 2075, 2772, 2903, 3336, 3532, 3896, 3903 |
| BsaWI | WCCGGW | 2 cut(s) | 3444, 3595 |
| Bse118I | RCCGGY | 3 cut(s) | 1468, 1872, 3444 |
| Bse1I | ACTGG | 8 cut(s) | 172, 759, 1593, 3269, 3347, 3543, 4118, 4904 |
| Bse3DI | GCAATG | 7 cut(s) | 51, 1500, 3375, 3832, 4556, 4635, 4816 |
| BseCI | ATCGAT | 1 cut(s) | 4405 |
| BseDI | CCNNGG | 9 cut(s) | 624, 900, 2075, 2772, 2903, 3336, 3532, 3896, 3903 |
| BseMI | GCAATG | 7 cut(s) | 51, 1500, 3375, 3832, 4556, 4635, 4816 |
| BseNI | ACTGG | 8 cut(s) | 172, 759, 1593, 3269, 3347, 3543, 4118, 4904 |
| BseRI | GAGGAG | 6 cut(s) | 622, 726, 1246, 3858, 3920, 4955 |
| BseSI | GKGCMC | 5 cut(s) | 767, 2258, 3903, 4142, 4573 |
| BseYI | CCCAGC | 2 cut(s) | 96, 3631 |
| BsgI | GTGCAG | 6 cut(s) | 243, 2154, 3752, 3787, 4068, 4880 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3600 |
| BshNI | GGYRCC | 3 cut(s) | 3640, 4612, 4655 |
| BshTI | ACCGGT | 1 cut(s) | 3444 |
| BshVI | ATCGAT | 1 cut(s) | 4405 |
| BsiEI | CGRYCG | 1 cut(s) | 3600 |
| BsiHKAI | GWGCWC | 8 cut(s) | 767, 967, 1434, 2258, 2840, 4142, 4365, 4573 |
| BsiHKCI | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| BsiSI | CCGG | 7 cut(s) | 1469, 1873, 2903, 3445, 3596, 3695, 4891 |
| BslFI | GGGAC | 3 cut(s) | 575, 1520, 4615 |
| BsmAI | GTCTC | 8 cut(s) | 335, 1300, 1325, 1460, 1898, 2573, 3048, 3131 |
| BsmFI | GGGAC | 3 cut(s) | 575, 1520, 4615 |
| BsmI | GAATGC | 5 cut(s) | 439, 718, 2046, 2153, 3015 |
| Bso31I | GGTCTC | 2 cut(s) | 335, 3131 |
| BsoBI | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| Bsp120I | GGGCCC | 1 cut(s) | 3899 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 2230, 3255, 3524 |
| Bsp19I | CCATGG | 2 cut(s) | 900, 2075 |
| BspACI | CCGC | 4 cut(s) | 590, 2433, 2760, 3487 |
| BspDI | ATCGAT | 1 cut(s) | 4405 |
| BspHI | TCATGA | 3 cut(s) | 2686, 2710, 4690 |
| BspMAI | CTGCAG | 3 cut(s) | 943, 1052, 3672 |
| BspMI | ACCTGC | 2 cut(s) | 3094, 4902 |
| BspPI | GGATC | 9 cut(s) | 405, 827, 1089, 1102, 1651, 1850, 2092, 2628, 4430 |
| BspQI | GCTCTTC | 3 cut(s) | 417, 1989, 4107 |
| BspT107I | GGYRCC | 3 cut(s) | 3640, 4612, 4655 |
| BspTI | CTTAAG | 1 cut(s) | 4334 |
| BspTNI | GGTCTC | 2 cut(s) | 335, 3131 |
| BsrBI | CCGCTC | 1 cut(s) | 2760 |
| BsrDI | GCAATG | 7 cut(s) | 51, 1500, 3375, 3832, 4556, 4635, 4816 |
| BsrFI | RCCGGY | 3 cut(s) | 1468, 1872, 3444 |
| BsrI | ACTGG | 8 cut(s) | 172, 759, 1593, 3269, 3347, 3543, 4118, 4904 |
| BssAI | RCCGGY | 3 cut(s) | 1468, 1872, 3444 |
| BssECI | CCNNGG | 9 cut(s) | 624, 900, 2075, 2772, 2903, 3336, 3532, 3896, 3903 |
| BssNAI | GTATAC | 2 cut(s) | 221, 2798 |
| BssT1I | CCWWGG | 3 cut(s) | 624, 900, 2075 |
| Bst1107I | GTATAC | 2 cut(s) | 221, 2798 |
| BstAFI | CTTAAG | 1 cut(s) | 4334 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 494, 1438, 2050, 3887, 4292 |
| BstBAI | YACGTR | 2 cut(s) | 3082, 3945 |
| BstDSI | CCRYGG | 4 cut(s) | 900, 2075, 3336, 3532 |
| BstH2I | RGCGCY | 1 cut(s) | 1956 |
| BstHHI | GCGC | 2 cut(s) | 1955, 3869 |
| BstMAI | GTCTC | 8 cut(s) | 335, 1300, 1325, 1460, 1898, 2573, 3048, 3131 |
| BstMCI | CGRYCG | 1 cut(s) | 3600 |
| BstNSI | RCATGY | 7 cut(s) | 245, 515, 1521, 1674, 2604, 2728, 3834 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4078 |
| BstSFI | CTRYAG | 5 cut(s) | 498, 939, 987, 1048, 3668 |
| BstSLI | GKGCMC | 5 cut(s) | 767, 2258, 3903, 4142, 4573 |
| BstSNI | TACGTA | 2 cut(s) | 3082, 3945 |
| BstV2I | GAAGAC | 5 cut(s) | 2484, 2901, 3238, 3790, 4161 |
| BstX2I | RGATCY | 2 cut(s) | 832, 1094 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4728 |
| BstYI | RGATCY | 2 cut(s) | 832, 1094 |
| BstZ17I | GTATAC | 2 cut(s) | 221, 2798 |
| Bsu15I | ATCGAT | 1 cut(s) | 4405 |
| BsuTUI | ATCGAT | 1 cut(s) | 4405 |
| BtgI | CCRYGG | 4 cut(s) | 900, 2075, 3336, 3532 |
| BtrI | CACGTC | 1 cut(s) | 4877 |
| BtsI | GCAGTG | 4 cut(s) | 867, 936, 2353, 3665 |
| BveI | ACCTGC | 2 cut(s) | 3094, 4902 |
| CaiI | CAGNNNCTG | 3 cut(s) | 338, 2933, 4310 |
| CciI | TCATGA | 3 cut(s) | 2686, 2710, 4690 |
| CfoI | GCGC | 2 cut(s) | 1955, 3869 |
| Cfr10I | RCCGGY | 3 cut(s) | 1468, 1872, 3444 |
| Cfr13I | GGNCC | 9 cut(s) | 170, 232, 621, 2430, 3899, 3900, 4177, 4871, 4888 |
| ClaI | ATCGAT | 1 cut(s) | 4405 |
| CseI | GACGC | 4 cut(s) | 2073, 2597, 2786, 4316 |
| CsiI | ACCWGGT | 3 cut(s) | 172, 4087, 4468 |
| CspAI | ACCGGT | 1 cut(s) | 3444 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 299, 334 |
| DraIII | CACNNNGTG | 2 cut(s) | 2285, 4472 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2140 |
| EaeI | YGGCCR | 5 cut(s) | 352, 1874, 3725, 4455, 4917 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2140 |
| EciI | GGCGGA | 1 cut(s) | 2422 |
| Ecl136II | GAGCTC | 1 cut(s) | 965 |
| Eco105I | TACGTA | 2 cut(s) | 3082, 3945 |
| Eco130I | CCWWGG | 3 cut(s) | 624, 900, 2075 |
| Eco24I | GRGCYC | 3 cut(s) | 967, 1137, 3903 |
| Eco31I | GGTCTC | 2 cut(s) | 335, 3131 |
| Eco47I | GGWCC | 4 cut(s) | 170, 2430, 4177, 4871 |
| Eco53kI | GAGCTC | 1 cut(s) | 965 |
| Eco57I | CTGAAG | 4 cut(s) | 1560, 2204, 3153, 3632 |
| Eco88I | CYCGRG | 3 cut(s) | 194, 3659, 3902 |
| EcoICRI | GAGCTC | 1 cut(s) | 965 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3899, 4177 |
| EcoRI | GAATTC | 3 cut(s) | 328, 3434, 4523 |
| EcoT14I | CCWWGG | 3 cut(s) | 624, 900, 2075 |
| EcoT22I | ATGCAT | 9 cut(s) | 282, 1209, 1523, 1804, 2046, 2209, 2726, 3156, 3832 |
| EcoT38I | GRGCYC | 3 cut(s) | 967, 1137, 3903 |
| ErhI | CCWWGG | 3 cut(s) | 624, 900, 2075 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1878, 1910 |
| FaqI | GGGAC | 3 cut(s) | 575, 1520, 4615 |
| FauI | CCCGC | 1 cut(s) | 3480 |
| FauNDI | CATATG | 1 cut(s) | 1183 |
| FbaI | TGATCA | 4 cut(s) | 1705, 2974, 4687, 4855 |
| FblI | GTMKAC | 3 cut(s) | 220, 2797, 3853 |
| FriOI | GRGCYC | 3 cut(s) | 967, 1137, 3903 |
| GlaI | GCGC | 2 cut(s) | 1954, 3868 |
| GsaI | CCCAGC | 2 cut(s) | 100, 3635 |
| GsuI | CTGGAG | 3 cut(s) | 518, 1427, 4482 |
| HaeII | RGCGCY | 1 cut(s) | 1956 |
| HapII | CCGG | 7 cut(s) | 1469, 1873, 2903, 3445, 3596, 3695, 4891 |
| HgaI | GACGC | 4 cut(s) | 2073, 2597, 2786, 4316 |
| HhaI | GCGC | 2 cut(s) | 1955, 3869 |
| Hin6I | GCGC | 2 cut(s) | 1953, 3867 |
| HinP1I | GCGC | 2 cut(s) | 1953, 3867 |
| HincII | GTYRAC | 6 cut(s) | 1891, 2341, 2409, 2425, 4672, 4797 |
| HindII | GTYRAC | 6 cut(s) | 1891, 2341, 2409, 2425, 4672, 4797 |
| HindIII | AAGCTT | 5 cut(s) | 2960, 3178, 3413, 3740, 4331 |
| HpaI | GTTAAC | 4 cut(s) | 2409, 2425, 4672, 4797 |
| HpaII | CCGG | 7 cut(s) | 1469, 1873, 2903, 3445, 3596, 3695, 4891 |
| HphI | GGTGA | 9 cut(s) | 640, 1019, 1559, 2673, 3572, 3971, 4010, 4116, 4484 |
| HpyCH4IV | ACGT | 4 cut(s) | 3081, 3616, 3944, 4876 |
| HpySE526I | ACGT | 4 cut(s) | 3081, 3616, 3944, 4876 |
| HspAI | GCGC | 2 cut(s) | 1953, 3867 |
| KpnI | GGTACC | 2 cut(s) | 3644, 4616 |
| KroI | GCCGGC | 1 cut(s) | 1872 |
| KroNI | GCCGGC | 1 cut(s) | 1874 |
| Ksp22I | TGATCA | 4 cut(s) | 1705, 2974, 4687, 4855 |
| KspAI | GTTAAC | 4 cut(s) | 2409, 2425, 4672, 4797 |
| LguI | GCTCTTC | 3 cut(s) | 417, 1989, 4107 |
| LmnI | GCTCC | 6 cut(s) | 61, 537, 1390, 1446, 2765, 4638 |
| MabI | ACCWGGT | 3 cut(s) | 172, 4087, 4468 |
| MaeII | ACGT | 4 cut(s) | 3081, 3616, 3944, 4876 |
| MbiI | CCGCTC | 1 cut(s) | 2760 |
| MfeI | CAATTG | 1 cut(s) | 1839 |
| MflI | RGATCY | 2 cut(s) | 832, 1094 |
| MlsI | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| MluNI | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| MlyI | GAGTC | 8 cut(s) | 1034, 2090, 2113, 2947, 3176, 3671, 4379, 4597 |
| MmeI | TCCRAC | 5 cut(s) | 83, 981, 1412, 3592, 4395 |
| Mox20I | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| Mph1103I | ATGCAT | 9 cut(s) | 282, 1209, 1523, 1804, 2046, 2209, 2726, 3156, 3832 |
| MroNI | GCCGGC | 1 cut(s) | 1872 |
| MroXI | GAANNNNTTC | 2 cut(s) | 895, 1108 |
| MscI | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| MslI | CAYNNNNRTG | 5 cut(s) | 294, 981, 2461, 2989, 3465 |
| Msp20I | TGGCCA | 4 cut(s) | 354, 3727, 4457, 4919 |
| MspA1I | CMGCKG | 1 cut(s) | 595 |
| MspCI | CTTAAG | 1 cut(s) | 4334 |
| MspI | CCGG | 7 cut(s) | 1469, 1873, 2903, 3445, 3596, 3695, 4891 |
| MunI | CAATTG | 1 cut(s) | 1839 |
| Mva1269I | GAATGC | 5 cut(s) | 439, 718, 2046, 2153, 3015 |
| NaeI | GCCGGC | 1 cut(s) | 1874 |
| NciI | CCSGG | 3 cut(s) | 2904, 3695, 4891 |
| NcoI | CCATGG | 2 cut(s) | 900, 2075 |
| NdeI | CATATG | 1 cut(s) | 1183 |
| NgoMIV | GCCGGC | 1 cut(s) | 1872 |
| NmuCI | GTSAC | 7 cut(s) | 1007, 1282, 1400, 1547, 2679, 3663, 4538 |
| NsiI | ATGCAT | 9 cut(s) | 282, 1209, 1523, 1804, 2046, 2209, 2726, 3156, 3832 |
| NspI | RCATGY | 7 cut(s) | 245, 515, 1521, 1674, 2604, 2728, 3834 |
| PaeI | GCATGC | 3 cut(s) | 245, 1674, 2728 |
| PaeR7I | CTCGAG | 1 cut(s) | 194 |
| PagI | TCATGA | 3 cut(s) | 2686, 2710, 4690 |
| PciI | ACATGT | 1 cut(s) | 2600 |
| PciSI | GCTCTTC | 3 cut(s) | 417, 1989, 4107 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1876 |
| PctI | GAATGC | 5 cut(s) | 439, 718, 2046, 2153, 3015 |
| PdiI | GCCGGC | 1 cut(s) | 1874 |
| PdmI | GAANNNNTTC | 2 cut(s) | 895, 1108 |
| PfoI | TCCNGGA | 2 cut(s) | 534, 835 |
| PinAI | ACCGGT | 1 cut(s) | 3444 |
| PleI | GAGTC | 8 cut(s) | 1034, 2090, 2113, 2946, 3175, 3670, 4379, 4597 |
| PpsI | GAGTC | 8 cut(s) | 1034, 2090, 2113, 2946, 3175, 3670, 4379, 4597 |
| Ppu21I | YACGTR | 2 cut(s) | 3082, 3945 |
| PpuMI | RGGWCCY | 1 cut(s) | 4177 |
| PscI | ACATGT | 1 cut(s) | 2600 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4078 |
| PsiI | TTATAA | 1 cut(s) | 123 |
| Psp124BI | GAGCTC | 1 cut(s) | 967 |
| Psp5II | RGGWCCY | 1 cut(s) | 4177 |
| PspFI | CCCAGC | 2 cut(s) | 96, 3631 |
| PspOMI | GGGCCC | 1 cut(s) | 3899 |
| PspPI | GGNCC | 9 cut(s) | 170, 232, 621, 2430, 3899, 3900, 4177, 4871, 4888 |
| PspPPI | RGGWCCY | 1 cut(s) | 4177 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2901, 2933 |
| PstI | CTGCAG | 3 cut(s) | 943, 1052, 3672 |
| PstNI | CAGNNNCTG | 3 cut(s) | 338, 2933, 4310 |
| PsuI | RGATCY | 2 cut(s) | 832, 1094 |
| PvuII | CAGCTG | 1 cut(s) | 595 |
| RseI | CAYNNNNRTG | 5 cut(s) | 294, 981, 2461, 2989, 3465 |
| SacI | GAGCTC | 1 cut(s) | 967 |
| SapI | GCTCTTC | 3 cut(s) | 417, 1989, 4107 |
| Sau96I | GGNCC | 9 cut(s) | 170, 232, 621, 2430, 3899, 3900, 4177, 4871, 4888 |
| ScaI | AGTACT | 1 cut(s) | 3719 |
| SchI | GAGTC | 8 cut(s) | 1034, 2090, 2113, 2947, 3176, 3671, 4379, 4597 |
| SexAI | ACCWGGT | 3 cut(s) | 172, 4087, 4468 |
| SfcI | CTRYAG | 5 cut(s) | 498, 939, 987, 1048, 3668 |
| Sfr274I | CTCGAG | 1 cut(s) | 194 |
| SinI | GGWCC | 4 cut(s) | 170, 2430, 4177, 4871 |
| SlaI | CTCGAG | 1 cut(s) | 194 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 294, 981, 2461, 2989, 3465 |
| SmlI | CTYRAG | 5 cut(s) | 194, 2482, 4334, 4518, 4703 |
| SmoI | CTYRAG | 5 cut(s) | 194, 2482, 4334, 4518, 4703 |
| SnaBI | TACGTA | 2 cut(s) | 3082, 3945 |
| SpeI | ACTAGT | 3 cut(s) | 1013, 2258, 2366 |
| SphI | GCATGC | 3 cut(s) | 245, 1674, 2728 |
| SsiI | CCGC | 4 cut(s) | 590, 2433, 2760, 3487 |
| SspI | AATATT | 4 cut(s) | 1109, 2748, 2875, 4785 |
| SstI | GAGCTC | 1 cut(s) | 967 |
| StyI | CCWWGG | 3 cut(s) | 624, 900, 2075 |
| TaiI | ACGT | 4 cut(s) | 3084, 3619, 3947, 4879 |
| TaqI | TCGA | 9 cut(s) | 195, 203, 462, 1351, 3600, 3949, 4405, 4597, 4697 |
| TatI | WGTACW | 3 cut(s) | 2917, 3717, 4758 |
| TseFI | GTSAC | 7 cut(s) | 1007, 1282, 1400, 1547, 2679, 3663, 4538 |
| Tsp45I | GTSAC | 7 cut(s) | 1007, 1282, 1400, 1547, 2679, 3663, 4538 |
| TspGWI | ACGGA | 4 cut(s) | 1979, 2287, 3325, 3521 |
| Vha464I | CTTAAG | 1 cut(s) | 4334 |
| VneI | GTGCAC | 4 cut(s) | 763, 2254, 4138, 4569 |
| VpaK11BI | GGWCC | 4 cut(s) | 170, 2430, 4177, 4871 |
| XbaI | TCTAGA | 2 cut(s) | 3682, 4399 |
| XceI | RCATGY | 7 cut(s) | 245, 515, 1521, 1674, 2604, 2728, 3834 |
| XhoI | CTCGAG | 1 cut(s) | 194 |
| XmiI | GTMKAC | 3 cut(s) | 220, 2797, 3853 |
| XmnI | GAANNNNTTC | 2 cut(s) | 895, 1108 |
| ZrmI | AGTACT | 1 cut(s) | 3719 |
| Zsp2I | ATGCAT | 9 cut(s) | 282, 1209, 1523, 1804, 2046, 2209, 2726, 3156, 3832 |