AT2G36490

,transcriptional activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002894
Physical Location & Seq
Reverse (-)
15307907 .. 15314807
6901 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36490.1

Sequence Viewer

Length: 4182 bp
ATGGAGAAACAGAGGAGAGAAGAAAGCAGCTTTCAACAACCTCCATGGATTCCTCAGACACCCATGAAGCCATTTTCACCGATCTGCCCATACACGGTGGAGGATCAATATCATAGCAGTCAATTGGAGGAAAGGAGATTTGTTGGGAACAAGGATATGAGTGGTCTTGATCACTTGTCTTTTGGGGATTTGCTTGCTCTAGCTAACACTGCATCCCTCATATTCTCTGGTCAGACTCCAATACCTACAAGAAACACAGAGGTTATGCAAAAAGGTACTGAAGAAGTGGAGAGTTTGAGCTCAGTGAGTAACAATGTTGCTGAACAGATCCTCAAGACTCCTGAAAAACCTAAGAGGAAGAAGCATCGGCCAAAGGTTCGTAGAGAAGCTAAACCCAAGAGGGAGCCTAAACCACGAGCTCCGAGGAAGTCTGTTGTCACCGATGGTCAAGAAAGCAAAACACCAAAGAGGAAATATGTGCGGAAGAAGGTTGAAGTCAGTAAGGATCAAGACGCTACTCCGGTTGAATCATCAGCAGCTGTTGAAACTTCAACTCGTCCTAAGAGGCTCTGTAGACGAGTCTTGGATTTTGAAGCCGAAAATGGAGAAAACCAGACCAACGGTGACATTAGAGAAGCAGGTGAGATGGAATCAGCTCTTCAAGAGAAGCAGTTAGATTCTGGGAATCAAGAGTTAAAAGATTGCCTTCTTTCGGCTCCTAGCACGCCCAAGAGAAAGCGCAGCCAAGGTAAAAGAAAGGGAGTTCAACCAAAGAAAAATGGCAGTAATCTAGAAGAAGTCGATATTTCGATGGCGCAAGCTGCAAAGAGAAGACAAGGACCAACTTGTTGCGACATGAATCTATCAGGGATTCAGTATGATGAGCAATGTGACTACCAGAAAATGCATTGGTTGTATTCCCCAAACTTGCAACAGGGAGGGATGAGATATGATGCCATTTGCAGCAAAGTATTCTCTGGACAACAGCACAATTATGTTTCTGCCTTTCACGCTACGTGCTACAGTTCCACATCTCAGCTCAGTGCTAATAGAGTCCTAACCGTTGAAGAAAGACGAGAAGGTATCTTTCAAGGAAGGCAAGAGTCTGAGCTAAATGTTCTCTCGGATAAGATAGACACGCCGATCAAGAAGAAAACAACAGGCCATGCTCGATTCCGGAATTTGTCTTCAATGAATAAACTTGTGGAAGTTCCTGAGCATTTAACCTCAGGATATTGTAGCAAGCCACAGCAAAATAATAAGATTCTTGTTGATACGCGGGTGACTGTGAGCAAAAAGAAGCCAACCAAGTCTGAGAAATCACAAACCAAACAGAAAAATCTTCTTCCGAATCTTTGCCGTTTTCCACCTTCATTTACTGGTCTTTCTCCAGATGAACTTTGGAAACGACGTAACTCGATCGAAACAATCAGTGAGCTATTGCGTCTATTAGACATCAACAGGGAGCATTCTGAAACTGCTCTCGTTCCTTACACAATGAATAGCCAGATTGTACTCTTTGGTGGTGGCGCTGGAGCAATTGTGCCTGTAACTCCTGTTAAAAAACCACGCCCACGACCAAAGGTTGATCTAGACGATGAGACAGACAGAGTGTGGAAACTGCTATTGGAGAATATTAATAGCGAAGGTGTTGACGGATCAGACGAGCAGAAGGCGAAATGGTGGGAGGAAGAACGTAATGTGTTTCGAGGACGAGCTGACTCATTTATTGCAAGGATGCACCTTGTACAAGGGGATCGACGTTTTACGCCTTGGAAGGGATCCGTCGTGGATTCTGTTGTTGGAGTATTTCTCACTCAAAATGTTTCAGACCATCTCTCAAGTTCGGCTTTCATGTCGTTGGCTTCCCAGTTCCCTGTCCCTTTTGTACCGAGCAGTAACTTTGACGCTGGAACAAGCTCGATGCCTTCTATTCAAATAACGTACTTGGACTCAGAGGAAACGATGTCAAGCCCACCCGATCACAATCACAGTTCTGTTACTTTGAAAAATACACAGCCTGATGAGGAGAAGGATTATGTACCTAGCAATGAAACCTCCAGAAGCAGTAGTGAGATTGCCATCTCAGCCCATGAATCAGTTGACAAAACCACGGATTCAAAGGAGTATGTTGATTCAGATCGAAAAGGCTCAAGTGTAGAGGTTGATAAGACGGATGAGAAGTGTCGTGTCCTGAACCTGTTTCCATCTGAAGATTCTGCACTTACATGTCAACATTCGATGGTGTCTGATGCTCCTCAAAATACAGAGAGAGCAGGATCAAGCTCAGAGATCGACTTAGAAGGAGAGTATCGTACTTCCTTTATGAAGCTCCTACAGGGGGTACAAGTCTCTCTAGAAGATTCCAATCAAGTATCACCAAATATGTCTCCGGGTGATTGTAGCTCAGAAATTAAGGGTTTCCAGTCAATGAAAGAGCCCACAAAATCCTCTGTTGATAGTAGTGAACCTGGTTGTTGCTCTCAGCAAGATGGGGATGTTTTGAGTTGTCAGAAACCTACCTTAAAAGAAAAAGGGAAAAAGGTTTTGAAGGAGGAAAAAAAAGCGTTTGACTGGGATTGTTTAAGAAGAGAAGCCCAAGCTAGAGCAGGAATTAGAGAAAAAACAAGAAGTACAATGGACACCGTGGATTGGAAGGCAATACGAGCAGCAGATGTTAAGGAAGTTGCTGAAACAATCAAGAGTCGCGGGATGAACCATAAACTTGCAGAACGTATACAGGGCTTCCTTGATCGACTGGTAAATGACCATGGAAGTATCGATCTTGAATGGTTGAGAGATGTTCCACCAGATAAAGCAAAAGAATATCTTCTGAGCTTTAACGGATTGGGACTGAAAAGTGTGGAGTGTGTGCGGCTTCTAACACTTCACCATCTTGCCTTTCCAGTTGATACAAATGTTGGGCGCATAGCCGTCAGACTTGGATGGGTGCCCCTTCAGCCGCTCCCAGAGTCACTTCAGTTGCATCTTCTGGAAATGTATCCTATGCTTGAATCTATTCAAAAGTATCTTTGGCCCCGTCTCTGCAAACTCGACCAAAAAACATTGTATGAGTTGCACTACCAGATGATTACTTTTGGAAAGGTCTTTTGCACAAAGAGCAAACCTAATTGCAATGCATGTCCGATGAAAGGAGAATGCAGACATTTTGCCAGTGCGTTTGCAAGTGCAAGGCTTGCTTTACCAAGTACAGAGAAAGGTATGGGGACACCTGATAAAAACCCTTTGCCTCTACACCTGCCAGAGCCATTCCAGAGAGAGCAAGGGTCTGAAGTAGTACAGCACTCAGAACCAGCAAAAAAGGTCACATGTTGTGAACCAATCATCGAAGAGCCTGCTTCACCGGAGCCAGAAACCGCAGAAGTATCAATAGCTGACATAGAGGAGGCGTTTTTTGAGGATCCAGAAGAAATTCCTACCATCAGGCTAAACATGGATGCATTTACCAGTAACTTGAAGAAGATAATGGAACACAACAAGGAACTTCAAGACGGAAACATGTCCAGCGCTTTAGTTGCACTTACTGCTGAAACTGCTTCTCTTCCAATGCCTAAGCTCAAGAATATCAGCCAGTTAAGGACAGAACACCGAGTTTACGAACTTCCAGACGAGCATCCTCTTCTAGCTCAGTTGGAAAAGAGAGAACCTGATGATCCATGTTCTTATTTGCTTGCTATATGGACGCCAGGTGAGACGGCTGATTCTATTCAACCGTCTGTTAGTACGTGCATATTCCAAGCAAATGGTATGCTTTGTGACGAGGAGACTTGTTTCTCCTGCAACAGCATCAAGGAGACTAGATCTCAAATTGTGAGAGGGACAATTTTGATTCCTTGTAGAACAGCGATGAGGGGTAGTTTTCCTCTAAATGGAACGTACTTTCAAGTAAATGAGGTGTTTGCGGATCATGCATCCAGCCTAAACCCAATCAATGTCCCAAGGGAATTGATATGGGAATTACCTCGAAGAACGGTCTATTTTGGTACCTCTGTTCCTACGATATTCAAAGGTTTATCAACTGAGAAGATACAGGCTTGCTTTTGGAAAGGGTACGTATGTGTACGTGGATTTGATCGAAAGACGAGGGGACCGAAGCCTTTGATTGCAAGATTGCACTTCCCGGCGAGCAAACTGAAGGGACAACAAGCTAACCTCGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031935 GO:0031936 GO:0032259 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0035510 GO:0040029 GO:0043076 GO:0043078 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045815 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0061458 GO:0065007 GO:0070988 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0080111 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1902275 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:2000112 GO:2000113 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Perm-CXXC RRM_DME

Protein Analysis

1393

Amino Acids

156.55

Weight (kDa)

7.13

Isoelectric Point (pI)

49.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Perm-CXXC PF15629 1249 - 1277 2.8e-13 Permuted single zf-CXXC unit
RRM_DME PF15628 1280 - 1380 3.6e-54 RRM in Demeter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 629, 3267
Acc36I ACCTGC 2 cut(s) 629, 3267
Acc65I GGTACC 1 cut(s) 4004
AccB1I GGYRCC 2 cut(s) 2950, 4004
AccBSI CCGCTC 1 cut(s) 2965
AccI GTMKAC 2 cut(s) 574, 2737
AccII CGCG 2 cut(s) 1279, 2709
AccIII TCCGGA 1 cut(s) 1176
AciI CCGC 7 cut(s) 481, 1279, 2709, 2875, 2963, 3378, 3923
AcoI YGGCCR 1 cut(s) 368
AcsI RAATTY 2 cut(s) 1180, 3432
AcuI CTGAAG 6 cut(s) 300, 2232, 2942, 2963, 3312, 4175
AcyI GRCGYC 1 cut(s) 3704
AfeI AGCGCT 1 cut(s) 3529
AfiI CCNNNNNNNGG 7 cut(s) 94, 712, 1778, 2341, 2652, 3152, 3890
AflIII ACRYGT 3 cut(s) 2228, 3329, 3519
AjnI CCWGG 2 cut(s) 2470, 3706
AjuI GAANNNNNNNTTGG 2 cut(s) 1610, 1642
Alw21I GWGCWC 2 cut(s) 302, 421
Alw26I GTCTC 7 cut(s) 1595, 2356, 2394, 3047, 3707, 3779, 3809
AlwNI CAGNNNCTG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 1176
Aor51HI AGCGCT 1 cut(s) 3529
AoxI GGCC 3 cut(s) 368, 1162, 3035
ApeKI GCWGC 6 cut(s) 27, 536, 741, 821, 963, 2669
ApoI RAATTY 2 cut(s) 1180, 3432
AseI ATTAAT 1 cut(s) 1638
Asp700I GAANNNNTTC 3 cut(s) 2829, 3018, 3432
Asp718I GGTACC 1 cut(s) 4004
AspLEI GCGC 5 cut(s) 741, 817, 1532, 2928, 3530
AspS9I GGNCC 3 cut(s) 839, 3036, 4109
AsuC2I CCSGG 2 cut(s) 2394, 4142
AvaII GGWCC 2 cut(s) 839, 4109
AxyI CCTNAGG 1 cut(s) 1228
BaeGI GKGCMC 1 cut(s) 2955
BaeI ACNNNNGTAYC 8 cut(s) 1266, 1299, 2904, 2937, 3996, 4029, 4063, 4096
BamHI GGATCC 2 cut(s) 1781, 3421
BanI GGYRCC 2 cut(s) 2950, 4004
BanII GRGCYC 3 cut(s) 302, 421, 2442
BauI CACGAG 1 cut(s) 414
BbsI GAAGAC 2 cut(s) 838, 1179
Bbv12I GWGCWC 2 cut(s) 302, 421
BbvI GCAGC 6 cut(s) 39, 548, 753, 808, 975, 2681
BceAI ACGGC 3 cut(s) 1344, 2918, 3732
BcgI CGANNNNNNTGC 2 cut(s) 3338, 3372
BciT130I CCWGG 2 cut(s) 2472, 3708
BciVI GTATCC 1 cut(s) 3012
BclI TGATCA 1 cut(s) 169
BcnI CCSGG 2 cut(s) 2394, 4142
BcoDI GTCTC 7 cut(s) 1595, 2356, 2394, 3047, 3707, 3779, 3809
BfaI CTAG 9 cut(s) 200, 720, 791, 1592, 2046, 2357, 2604, 3644, 3819
BfmI CTRYAG 3 cut(s) 571, 1021, 2336
BfoI RGCGCY 2 cut(s) 1533, 3531
BfuAI ACCTGC 2 cut(s) 629, 3267
BfuI GTATCC 1 cut(s) 3012
BglII AGATCT 1 cut(s) 3821
BisI GCNGC 8 cut(s) 28, 537, 742, 822, 964, 2670, 2876, 2963
BlsI GCNGC 8 cut(s) 29, 538, 743, 823, 965, 2671, 2877, 2964
Bme1390I CCNGG 4 cut(s) 2394, 2472, 3708, 4142
Bme18I GGWCC 2 cut(s) 839, 4109
BmgT120I GGNCC 3 cut(s) 839, 3036, 4109
BmiI GGNNCC 9 cut(s) 405, 717, 1783, 2952, 3038, 3369, 3423, 4006, 4110
BmrFI CCNGG 4 cut(s) 2394, 2472, 3708, 4142
BmrI ACTGGG 2 cut(s) 1864, 2584
BmuI ACTGGG 2 cut(s) 1864, 2584
BpiI GAAGAC 2 cut(s) 838, 1179
BplI GAGNNNNNCTC 2 cut(s) 1797, 1829
BpmI CTGGAG 3 cut(s) 1374, 1554, 2044
Bpu10I CCTNAGC 2 cut(s) 1215, 3573
BpuEI CTTGAG 4 cut(s) 317, 1825, 2137, 3563
BpuMI CCSGG 2 cut(s) 2394, 4142
Bsa29I ATCGAT 1 cut(s) 2781
BsaAI YACGTR 4 cut(s) 1017, 3747, 4075, 4085
BsaBI GATNNNNATC 5 cut(s) 108, 1986, 2081, 2139, 2367
BsaHI GRCGYC 1 cut(s) 3704
BsaJI CCNNGG 8 cut(s) 44, 422, 745, 1772, 2112, 2646, 2770, 3959
BsaWI WCCGGW 3 cut(s) 520, 1176, 3364
BsaXI ACNNNNNCTCC 2 cut(s) 1527, 1557
Bsc4I CCNNNNNNNGG 7 cut(s) 94, 712, 1778, 2341, 2652, 3152, 3890
Bse1I ACTGG 9 cut(s) 1384, 1870, 2425, 2579, 2763, 2906, 3174, 3468, 3592
Bse21I CCTNAGG 1 cut(s) 1228
Bse3DI GCAATG 3 cut(s) 893, 2056, 3142
Bse8I GATNNNNATC 5 cut(s) 108, 1986, 2081, 2139, 2367
BseAI TCCGGA 1 cut(s) 1176
BseBI CCWGG 2 cut(s) 2472, 3708
BseCI ATCGAT 1 cut(s) 2781
BseDI CCNNGG 8 cut(s) 44, 422, 745, 1772, 2112, 2646, 2770, 3959
BseJI GATNNNNATC 5 cut(s) 108, 1986, 2081, 2139, 2367
BseLI CCNNNNNNNGG 7 cut(s) 94, 712, 1778, 2341, 2652, 3152, 3890
BseMI GCAATG 3 cut(s) 893, 2056, 3142
BseNI ACTGG 9 cut(s) 1384, 1870, 2425, 2579, 2763, 2906, 3174, 3468, 3592
BseRI GAGGAG 5 cut(s) 28, 2042, 2247, 3419, 3797
BseSI GKGCMC 1 cut(s) 2955
BseXI GCAGC 6 cut(s) 39, 548, 753, 808, 975, 2681
BsgI GTGCAG 1 cut(s) 2205
Bsh1236I CGCG 2 cut(s) 1279, 2709
Bsh1285I CGRYCG 1 cut(s) 1422
BshFI GGCC 3 cut(s) 370, 1164, 3037
BshNI GGYRCC 2 cut(s) 2950, 4004
BshVI ATCGAT 1 cut(s) 2781
BsiEI CGRYCG 1 cut(s) 1422
BsiHKAI GWGCWC 2 cut(s) 302, 421
BsiSI CCGG 5 cut(s) 521, 1177, 2393, 3365, 4142
BslFI GGGAC 7 cut(s) 1865, 2865, 3241, 3853, 3941, 4122, 4173
BslI CCNNNNNNNGG 7 cut(s) 94, 712, 1778, 2341, 2652, 3152, 3890
BsmAI GTCTC 7 cut(s) 1595, 2356, 2394, 3047, 3707, 3779, 3809
BsmBI CGTCTC 2 cut(s) 3047, 3707
BsmFI GGGAC 7 cut(s) 1865, 2865, 3241, 3853, 3941, 4122, 4173
BsmI GAATGC 2 cut(s) 1468, 3164
BsnI GGCC 3 cut(s) 370, 1164, 3037
Bsp1286I GDGCHC 4 cut(s) 302, 421, 2442, 2955
Bsp13I TCCGGA 1 cut(s) 1176
Bsp1407I TGTACA 1 cut(s) 1747
Bsp19I CCATGG 2 cut(s) 44, 2770
BspACI CCGC 7 cut(s) 481, 1279, 2709, 2875, 2963, 3378, 3923
BspANI GGCC 3 cut(s) 370, 1164, 3037
BspDI ATCGAT 1 cut(s) 2781
BspEI TCCGGA 1 cut(s) 1176
BspFNI CGCG 2 cut(s) 1279, 2709
BspLI GGNNCC 9 cut(s) 405, 717, 1783, 2952, 3038, 3369, 3423, 4006, 4110
BspMI ACCTGC 2 cut(s) 629, 3267
BspQI GCTCTTC 2 cut(s) 663, 3345
BspT107I GGYRCC 2 cut(s) 2950, 4004
BsrBI CCGCTC 1 cut(s) 2965
BsrDI GCAATG 3 cut(s) 893, 2056, 3142
BsrGI TGTACA 1 cut(s) 1747
BsrI ACTGG 9 cut(s) 1384, 1870, 2425, 2579, 2763, 2906, 3174, 3468, 3592
BssECI CCNNGG 8 cut(s) 44, 422, 745, 1772, 2112, 2646, 2770, 3959
BssNAI GTATAC 1 cut(s) 2738
BssNI GRCGYC 1 cut(s) 3704
BssSI CACGAG 1 cut(s) 414
BssT1I CCWWGG 5 cut(s) 44, 745, 1772, 2770, 3959
Bst1107I GTATAC 1 cut(s) 2738
Bst2BI CACGAG 1 cut(s) 414
Bst2UI CCWGG 2 cut(s) 2472, 3708
Bst4CI ACNGT 9 cut(s) 97, 623, 1025, 1063, 1288, 1994, 2647, 3735, 3994
Bst6I CTCTTC 5 cut(s) 663, 2584, 3345, 3567, 3645
BstACI GRCGYC 1 cut(s) 3704
BstAPI GCANNNNNTGC 2 cut(s) 3197, 3545
BstAUI TGTACA 1 cut(s) 1747
BstBAI YACGTR 4 cut(s) 1017, 3747, 4075, 4085
BstC8I GCNNGC 9 cut(s) 195, 725, 819, 1244, 3198, 3357, 3693, 4057, 4147
BstDSI CCRYGG 4 cut(s) 44, 2112, 2646, 2770
BstFNI CGCG 2 cut(s) 1279, 2709
BstH2I RGCGCY 2 cut(s) 1533, 3531
BstHHI GCGC 5 cut(s) 741, 817, 1532, 2928, 3530
BstMAI GTCTC 7 cut(s) 1595, 2356, 2394, 3047, 3707, 3779, 3809
BstMCI CGRYCG 1 cut(s) 1422
BstNI CCWGG 2 cut(s) 2472, 3708
BstNSI RCATGY 4 cut(s) 2232, 3144, 3333, 3523
BstSCI CCNGG 4 cut(s) 2392, 2470, 3706, 4140
BstSFI CTRYAG 3 cut(s) 571, 1021, 2336
BstSLI GKGCMC 1 cut(s) 2955
BstSNI TACGTA 1 cut(s) 4075
BstUI CGCG 2 cut(s) 1279, 2709
BstV1I GCAGC 6 cut(s) 39, 548, 753, 808, 975, 2681
BstV2I GAAGAC 2 cut(s) 838, 1179
BstX2I RGATCY 4 cut(s) 327, 1781, 3421, 3821
BstXI CCANNNNNNTGG 1 cut(s) 3764
BstYI RGATCY 4 cut(s) 327, 1781, 3421, 3821
BstZ17I GTATAC 1 cut(s) 2738
Bsu15I ATCGAT 1 cut(s) 2781
Bsu36I CCTNAGG 1 cut(s) 1228
BsuI GTATCC 1 cut(s) 3012
BsuRI GGCC 3 cut(s) 370, 1164, 3037
BsuTUI ATCGAT 1 cut(s) 2781
BtgI CCRYGG 4 cut(s) 44, 2112, 2646, 2770
BtgZI GCGATG 1 cut(s) 3881
BtsI GCAGTG 1 cut(s) 207
BtsIMutI CAGTG 5 cut(s) 207, 309, 1048, 1438, 3181
BveI ACCTGC 2 cut(s) 629, 3267
Cac8I GCNNGC 9 cut(s) 195, 725, 819, 1244, 3198, 3357, 3693, 4057, 4147
CaiI CAGNNNCTG 1 cut(s) 539
CfoI GCGC 5 cut(s) 741, 817, 1532, 2928, 3530
Cfr13I GGNCC 3 cut(s) 839, 3036, 4109
ClaI ATCGAT 1 cut(s) 2781
CseI GACGC 4 cut(s) 521, 1433, 1916, 3712
CsiI ACCWGGT 1 cut(s) 2470
EaeI YGGCCR 1 cut(s) 368
Eam1104I CTCTTC 5 cut(s) 663, 2584, 3345, 3567, 3645
EarI CTCTTC 5 cut(s) 663, 2584, 3345, 3567, 3645
Ecl136II GAGCTC 2 cut(s) 300, 419
Eco105I TACGTA 1 cut(s) 4075
Eco130I CCWWGG 5 cut(s) 44, 745, 1772, 2770, 3959
Eco24I GRGCYC 3 cut(s) 302, 421, 2442
Eco47I GGWCC 2 cut(s) 839, 4109
Eco47III AGCGCT 1 cut(s) 3529
Eco53kI GAGCTC 2 cut(s) 300, 419
Eco57I CTGAAG 6 cut(s) 300, 2232, 2942, 2963, 3312, 4175
Eco81I CCTNAGG 1 cut(s) 1228
EcoICRI GAGCTC 2 cut(s) 300, 419
EcoRII CCWGG 2 cut(s) 2470, 3706
EcoT14I CCWWGG 5 cut(s) 44, 745, 1772, 2770, 3959
EcoT22I ATGCAT 4 cut(s) 909, 3142, 3463, 3934
EcoT38I GRGCYC 3 cut(s) 302, 421, 2442
ErhI CCWWGG 5 cut(s) 44, 745, 1772, 2770, 3959
Esp3I CGTCTC 2 cut(s) 3047, 3707
FalI AAGNNNNNCTT 8 cut(s) 690, 722, 1834, 1866, 2814, 2846, 3184, 3216
FaqI GGGAC 7 cut(s) 1865, 2865, 3241, 3853, 3941, 4122, 4173
FauI CCCGC 2 cut(s) 1272, 2702
FbaI TGATCA 1 cut(s) 169
FblI GTMKAC 2 cut(s) 574, 2737
Fnu4HI GCNGC 8 cut(s) 28, 537, 742, 822, 964, 2670, 2876, 2963
FriOI GRGCYC 3 cut(s) 302, 421, 2442
Fsp4HI GCNGC 8 cut(s) 28, 537, 742, 822, 964, 2670, 2876, 2963
FspBI CTAG 9 cut(s) 200, 720, 791, 1592, 2046, 2357, 2604, 3644, 3819
GlaI GCGC 5 cut(s) 740, 816, 1531, 2927, 3529
GluI GCNGC 8 cut(s) 28, 537, 742, 822, 964, 2670, 2876, 2963
GsuI CTGGAG 3 cut(s) 1374, 1554, 2044
HaeII RGCGCY 2 cut(s) 1533, 3531
HaeIII GGCC 3 cut(s) 370, 1164, 3037
HapII CCGG 5 cut(s) 521, 1177, 2393, 3365, 4142
HgaI GACGC 4 cut(s) 521, 1433, 1916, 3712
HhaI GCGC 5 cut(s) 741, 817, 1532, 2928, 3530
Hin1I GRCGYC 1 cut(s) 3704
Hin6I GCGC 5 cut(s) 739, 815, 1530, 2926, 3528
HinP1I GCGC 5 cut(s) 739, 815, 1530, 2926, 3528
HincII GTYRAC 3 cut(s) 1654, 2104, 2234
HindII GTYRAC 3 cut(s) 1654, 2104, 2234
HpaII CCGG 5 cut(s) 521, 1177, 2393, 3365, 4142
Hpy166II GTNNAC 9 cut(s) 575, 1654, 2104, 2234, 2468, 2738, 3338, 3616, 4082
Hpy8I GTNNAC 9 cut(s) 575, 1654, 2104, 2234, 2468, 2738, 3338, 3616, 4082
Hpy99I CGWCG 3 cut(s) 1413, 1764, 1790
HpyCH4III ACNGT 9 cut(s) 97, 623, 1025, 1063, 1288, 1994, 2647, 3735, 3994
Hsp92I GRCGYC 1 cut(s) 3704
HspAI GCGC 5 cut(s) 739, 815, 1530, 2926, 3528
Kpn2I TCCGGA 1 cut(s) 1176
KpnI GGTACC 1 cut(s) 4008
Ksp22I TGATCA 1 cut(s) 169
LguI GCTCTTC 2 cut(s) 663, 3345
LmnI GCTCC 9 cut(s) 403, 424, 721, 1465, 1535, 2260, 2337, 2970, 3367
Lsp1109I GCAGC 6 cut(s) 39, 548, 753, 808, 975, 2681
MabI ACCWGGT 1 cut(s) 2470
MaeI CTAG 9 cut(s) 200, 720, 791, 1592, 2046, 2357, 2604, 3644, 3819
MbiI CCGCTC 1 cut(s) 2965
MfeI CAATTG 2 cut(s) 122, 1539
MflI RGATCY 4 cut(s) 327, 1781, 3421, 3821
MhlI GDGCHC 4 cut(s) 302, 421, 2442, 2955
MlyI GAGTC 9 cut(s) 229, 331, 588, 1062, 1112, 1715, 1946, 2713, 2981
MmeI TCCRAC 2 cut(s) 1783, 3633
Mph1103I ATGCAT 4 cut(s) 909, 3142, 3463, 3934
MroI TCCGGA 1 cut(s) 1176
MroXI GAANNNNTTC 3 cut(s) 2829, 3018, 3432
MslI CAYNNNNRTG 2 cut(s) 993, 2227
MspA1I CMGCKG 1 cut(s) 539
MspI CCGG 5 cut(s) 521, 1177, 2393, 3365, 4142
MspR9I CCNGG 4 cut(s) 2394, 2472, 3708, 4142
MunI CAATTG 2 cut(s) 122, 1539
Mva1269I GAATGC 2 cut(s) 1468, 3164
MvaI CCWGG 2 cut(s) 2472, 3708
MvnI CGCG 2 cut(s) 1279, 2709
NciI CCSGG 2 cut(s) 2394, 4142
NcoI CCATGG 2 cut(s) 44, 2770
NlaIV GGNNCC 9 cut(s) 405, 717, 1783, 2952, 3038, 3369, 3423, 4006, 4110
NmuCI GTSAC 7 cut(s) 436, 623, 890, 1282, 2973, 3325, 3776
NsiI ATGCAT 4 cut(s) 909, 3142, 3463, 3934
NspI RCATGY 4 cut(s) 2232, 3144, 3333, 3523
PaqCI CACCTGC 2 cut(s) 629, 3267
PciI ACATGT 3 cut(s) 2228, 3329, 3519
PciSI GCTCTTC 2 cut(s) 663, 3345
PcsI WCGNNNNNNNCGW 2 cut(s) 1662, 4109
PctI GAATGC 2 cut(s) 1468, 3164
PdmI GAANNNNTTC 3 cut(s) 2829, 3018, 3432
PkrI GCNGC 8 cut(s) 29, 538, 743, 823, 965, 2671, 2877, 2964
Ple19I CGATCG 1 cut(s) 1422
PleI GAGTC 9 cut(s) 229, 331, 587, 1061, 1111, 1715, 1946, 2712, 2980
PpsI GAGTC 9 cut(s) 229, 331, 587, 1061, 1111, 1715, 1946, 2712, 2980
Ppu21I YACGTR 4 cut(s) 1017, 3747, 4075, 4085
PscI ACATGT 3 cut(s) 2228, 3329, 3519
PshBI ATTAAT 1 cut(s) 1638
Psp124BI GAGCTC 2 cut(s) 302, 421
Psp6I CCWGG 2 cut(s) 2470, 3706
PspGI CCWGG 2 cut(s) 2470, 3706
PspN4I GGNNCC 9 cut(s) 405, 717, 1783, 2952, 3038, 3369, 3423, 4006, 4110
PspPI GGNCC 3 cut(s) 839, 3036, 4109
PstNI CAGNNNCTG 1 cut(s) 539
PsuI RGATCY 4 cut(s) 327, 1781, 3421, 3821
PvuI CGATCG 1 cut(s) 1422
PvuII CAGCTG 1 cut(s) 539
RseI CAYNNNNRTG 2 cut(s) 993, 2227
SacI GAGCTC 2 cut(s) 302, 421
SapI GCTCTTC 2 cut(s) 663, 3345
SatI GCNGC 8 cut(s) 28, 537, 742, 822, 964, 2670, 2876, 2963
Sau96I GGNCC 3 cut(s) 839, 3036, 4109
SchI GAGTC 9 cut(s) 229, 331, 588, 1062, 1112, 1715, 1946, 2713, 2981
ScrFI CCNGG 4 cut(s) 2394, 2472, 3708, 4142
SduI GDGCHC 4 cut(s) 302, 421, 2442, 2955
SexAI ACCWGGT 1 cut(s) 2470
SfcI CTRYAG 3 cut(s) 571, 1021, 2336
SinI GGWCC 2 cut(s) 839, 4109
SmiMI CAYNNNNRTG 2 cut(s) 993, 2227
SmlI CTYRAG 4 cut(s) 332, 1840, 2152, 3578
SmoI CTYRAG 4 cut(s) 332, 1840, 2152, 3578
SnaBI TACGTA 1 cut(s) 4075
SsiI CCGC 7 cut(s) 481, 1279, 2709, 2875, 2963, 3378, 3923
SspI AATATT 1 cut(s) 1636
SspMI CTAG 9 cut(s) 200, 720, 791, 1592, 2046, 2357, 2604, 3644, 3819
SstI GAGCTC 2 cut(s) 302, 421
StyD4I CCNGG 4 cut(s) 2392, 2470, 3706, 4140
StyI CCWWGG 5 cut(s) 44, 745, 1772, 2770, 3959
TaaI ACNGT 9 cut(s) 97, 623, 1025, 1063, 1288, 1994, 2647, 3735, 3994
TaqII GACCGA 1 cut(s) 4126
TatI WGTACW 5 cut(s) 1513, 1747, 2633, 3209, 3298
TauI GCSGC 2 cut(s) 2878, 2965
TscAI CASTG 5 cut(s) 214, 309, 1048, 1438, 3181
TseFI GTSAC 7 cut(s) 436, 623, 890, 1282, 2973, 3325, 3776
TseI GCWGC 6 cut(s) 27, 536, 741, 821, 963, 2669
Tsp45I GTSAC 7 cut(s) 436, 623, 890, 1282, 2973, 3325, 3776
TspGWI ACGGA 6 cut(s) 1671, 1774, 2129, 2189, 2859, 3528
TspRI CASTG 5 cut(s) 214, 309, 1048, 1438, 3181
VpaK11BI GGWCC 2 cut(s) 839, 4109
VspI ATTAAT 1 cut(s) 1638
XapI RAATTY 2 cut(s) 1180, 3432
XbaI TCTAGA 3 cut(s) 790, 1591, 2356
XceI RCATGY 4 cut(s) 2232, 3144, 3333, 3523
XcmI CCANNNNNNNNNTGG 1 cut(s) 1398
XmiI GTMKAC 2 cut(s) 574, 2737
XmnI GAANNNNTTC 3 cut(s) 2829, 3018, 3432
XspI CTAG 9 cut(s) 200, 720, 791, 1592, 2046, 2357, 2604, 3644, 3819
Zsp2I ATGCAT 4 cut(s) 909, 3142, 3463, 3934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.