Rorug03G0122200

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0007466
Physical Location & Seq
Reverse (-)
9861103 .. 9863580
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0122200.1

Sequence Viewer

Length: 1404 bp
ATGCCTTCATCTTCTTCTTCTGTGACTGTGGTTTCAAAATGCACAGTTTATCCCAACCAAAAATCCACAATCAAATCCCTCAAGCTTTCGGTCTCAGACCTTCCCATGCTCTCCTGCCATTACATTCAGAAGGGAGTTCTGTTTAATTCCCCACCTTACTCCATCAACGACCTTGTCAATTCTCTCAAGCAATCTCTCTCCGTTGCCCTGACTCACTTCCCGGCTCTCGCCGGCCGTTTCGAGACGGACTCCGACGGGTACGTCCACATCCTCTGCAACGACGCCGGCGCTGATTTCATCCAGGCCAAGGCCAAACACCTAACCGTCGACGGCGTTCTGCCTCCTAATTGCGACGTCCCTCATTGCTTCAAAGAGTTCTTCACCTTTGACAGGACCATTAGCTACTCCGGCCACCACAAGCCTTTGGCGGCCGTTCAGGTCACCGAGCTCGCCGACGGCGTCTTCATCGGCTGCACTGTCAACCACTCCGTCACCGATGGGACCTCCTTCTGGCATTTCTTCAACACCTTCGCCGAAATAAACAGAGGCGCCATGAAAATCTCCAAGTCGCCGGACTTGTCCCGCGACACCGTCTTCAACTCTTCGGCGGTGCTTCGTGTCCCGGAAGGCGGCCCTAAGATCACCTTCTCCGGCAACGAGCCGTTAAGAGAGAGAATTTTCCACTTCACTAGAGAATCAATTCTGAAACTGAAATTCAGAGCCAATAACAACGCCGCCCGTAACGGCTTCTCCGAATCCGCCGAGATTTTCGGGAAGGCACGCAACGACACCTGGAATCTCGCTCCCCGAGACAACAACGGCTCCGCCAAAGCACCAACGGAAATCTCGTCCTTCCAGTCGCTGAGCGCGCAGCTCTGGCGCTCGGTGACACGTGTCAGGAGCTTAGACCGGTCCAAACCGACGACGTTTCGGATGGCGGTGAACTGCCGCCACAGGCTGGAGCCGAAGATGGACTCGCACTACTTCGGGAACGCGATTCAGAGCATCCCGACCATCGCCACCGTCGGCGATCTCCTATCTCATGACCTGCGCTGGGGGGCTGATCTGCTGCACAAGAACGTGGTGGCGCACGACAGCGACACGGTGCACCGCGGCGTAGAGGATTGGGAGAGCGCGCCGAGGTTGTTCCCGCTGGGGAACTTCGACGGCGCTTCAATGACGATGGGGAGCTCGCCGAGATTTCCGATGTACAACAATGACTTCGGTTGGGGGATGCCCTTGGCCGTAAGGAGCGGTAGGGCTAATAAGTTCGACGGTAAGATATCGGCGTTTCCGGGACGAGAGGGGAACGGAAGCGTTGATCTGGAGGTGGTTTTGGCGCCGGAGACGATGGCGGGGCTGGAGTGCGATGAGGAGTTCATGCAGTACGTAACTGTGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

467

Amino Acids

51.52

Weight (kDa)

7.26

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 7 - 460 2.9e-100 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 357
Acc36I ACCTGC 1 cut(s) 1056
AccB1I GGYRCC 2 cut(s) 548, 1339
AccB7I CCANNNNNTGG 1 cut(s) 958
AccBSI CCGCTC 1 cut(s) 1254
AccI GTMKAC 1 cut(s) 327
AccII CGCG 5 cut(s) 585, 869, 995, 1113, 1136
AcoI YGGCCR 4 cut(s) 232, 409, 429, 1242
AcsI RAATTY 2 cut(s) 675, 713
AcvI CACGTG 1 cut(s) 893
AcyI GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
AfaI GTAC 3 cut(s) 260, 1211, 1388
AfiI CCNNNNNNNGG 6 cut(s) 307, 390, 510, 629, 958, 1054
AflIII ACRYGT 2 cut(s) 890, 892
AgeI ACCGGT 1 cut(s) 909
AgsI TTSAA 5 cut(s) 36, 370, 523, 598, 1176
AjnI CCWGG 2 cut(s) 300, 791
AluBI AGCT 6 cut(s) 85, 402, 448, 874, 903, 1191
AluI AGCT 6 cut(s) 85, 402, 448, 874, 903, 1191
Alw21I GWGCWC 3 cut(s) 450, 1110, 1193
Alw26I GTCTC 4 cut(s) 97, 236, 804, 1340
Alw44I GTGCAC 1 cut(s) 1106
AlwNI CAGNNNCTG 1 cut(s) 862
Ama87I CYCGRG 1 cut(s) 807
AoxI GGCC 7 cut(s) 232, 303, 309, 409, 429, 631, 1242
ApaLI GTGCAC 1 cut(s) 1106
ApeKI GCWGC 3 cut(s) 471, 871, 1069
ApoI RAATTY 2 cut(s) 675, 713
AsiGI ACCGGT 1 cut(s) 909
Asp700I GAANNNNTTC 1 cut(s) 699
AspS9I GGNCC 4 cut(s) 393, 501, 632, 912
AsuC2I CCSGG 3 cut(s) 221, 623, 1296
AsuHPI GGTGA 6 cut(s) 373, 433, 484, 634, 898, 952
AvaI CYCGRG 1 cut(s) 807
AvaII GGWCC 3 cut(s) 393, 501, 912
BaeGI GKGCMC 1 cut(s) 1110
BanI GGYRCC 2 cut(s) 548, 1339
BanII GRGCYC 2 cut(s) 450, 1193
BbrPI CACGTG 1 cut(s) 893
BbsI GAAGAC 2 cut(s) 454, 586
Bbv12I GWGCWC 3 cut(s) 450, 1110, 1193
BbvI GCAGC 3 cut(s) 458, 883, 1056
BccI CCATC 7 cut(s) 170, 491, 928, 964, 1022, 1177, 1345
BceAI ACGGC 9 cut(s) 219, 346, 416, 472, 646, 760, 835, 1183, 1229
BciT130I CCWGG 2 cut(s) 302, 793
BcnI CCSGG 3 cut(s) 221, 623, 1296
BcoDI GTCTC 4 cut(s) 97, 236, 804, 1340
BfaI CTAG 1 cut(s) 690
BfoI RGCGCY 5 cut(s) 291, 552, 883, 1173, 1343
BfuAI ACCTGC 1 cut(s) 1056
BisI GCNGC 8 cut(s) 429, 472, 631, 735, 872, 949, 1070, 1114
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 8 cut(s) 430, 473, 632, 736, 873, 950, 1071, 1115
Bme1390I CCNGG 5 cut(s) 221, 302, 623, 793, 1296
Bme18I GGWCC 3 cut(s) 393, 501, 912
BmeT110I CYCGRG 1 cut(s) 807
BmgT120I GGNCC 4 cut(s) 393, 501, 632, 912
BmiI GGNNCC 5 cut(s) 502, 550, 823, 963, 1341
BmrFI CCNGG 5 cut(s) 221, 302, 623, 793, 1296
BmsI GCATC 2 cut(s) 1014, 1224
BoxI GACNNNNGTC 1 cut(s) 893
BpiI GAAGAC 2 cut(s) 454, 586
BplI GAGNNNNNCTC 2 cut(s) 233, 265
BpmI CTGGAG 3 cut(s) 980, 1346, 1382
Bpu1102I GCTNAGC 1 cut(s) 863
BpuEI CTTGAG 2 cut(s) 65, 170
BpuMI CCSGG 3 cut(s) 221, 623, 1296
BsaAI YACGTR 2 cut(s) 893, 1390
BsaHI GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
BsaI GGTCTC 1 cut(s) 97
BsaJI CCNNGG 4 cut(s) 306, 1111, 1139, 1239
BsaWI WCCGGW 1 cut(s) 909
BsaXI ACNNNNNCTCC 4 cut(s) 734, 764, 806, 836
Bsc4I CCNNNNNNNGG 6 cut(s) 307, 390, 510, 629, 958, 1054
Bse118I RCCGGY 3 cut(s) 230, 284, 909
Bse1I ACTGG 1 cut(s) 856
Bse3DI GCAATG 1 cut(s) 361
BseBI CCWGG 2 cut(s) 302, 793
BseDI CCNNGG 4 cut(s) 306, 1111, 1139, 1239
BseGI GGATG 5 cut(s) 267, 297, 939, 1005, 1239
BseLI CCNNNNNNNGG 6 cut(s) 307, 390, 510, 629, 958, 1054
BseMI GCAATG 1 cut(s) 361
BseMII CTCAG 2 cut(s) 108, 854
BseNI ACTGG 1 cut(s) 856
BsePI GCGCGC 2 cut(s) 867, 1134
BseRI GAGGAG 1 cut(s) 1388
BseSI GKGCMC 1 cut(s) 1110
BseX3I CGGCCG 2 cut(s) 232, 429
BseXI GCAGC 3 cut(s) 458, 883, 1056
BseYI CCCAGC 2 cut(s) 1053, 1153
BsgI GTGCAG 2 cut(s) 457, 1055
Bsh1236I CGCG 5 cut(s) 585, 869, 995, 1113, 1136
Bsh1285I CGRYCG 2 cut(s) 235, 432
BshFI GGCC 7 cut(s) 234, 305, 311, 411, 431, 633, 1244
BshNI GGYRCC 2 cut(s) 548, 1339
BshTI ACCGGT 1 cut(s) 909
BsiEI CGRYCG 2 cut(s) 235, 432
BsiHKAI GWGCWC 3 cut(s) 450, 1110, 1193
BsiHKCI CYCGRG 1 cut(s) 807
BslFI GGGAC 5 cut(s) 341, 514, 565, 605, 1311
BslI CCNNNNNNNGG 6 cut(s) 307, 390, 510, 629, 958, 1054
BsmAI GTCTC 4 cut(s) 97, 236, 804, 1340
BsmBI CGTCTC 2 cut(s) 236, 1340
BsmFI GGGAC 5 cut(s) 341, 514, 565, 605, 1311
BsnI GGCC 7 cut(s) 234, 305, 311, 411, 431, 633, 1244
Bso31I GGTCTC 1 cut(s) 97
BsoBI CYCGRG 1 cut(s) 807
Bsp1286I GDGCHC 3 cut(s) 450, 1110, 1193
Bsp1407I TGTACA 1 cut(s) 1209
Bsp143I GATC 4 cut(s) 639, 1030, 1063, 1321
Bsp1720I GCTNAGC 1 cut(s) 863
BspANI GGCC 7 cut(s) 234, 305, 311, 411, 431, 633, 1244
BspCNI CTCAG 2 cut(s) 107, 855
BspFNI CGCG 5 cut(s) 585, 869, 995, 1113, 1136
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 5 cut(s) 502, 550, 823, 963, 1341
BspMI ACCTGC 1 cut(s) 1056
BspT107I GGYRCC 2 cut(s) 548, 1339
BspTNI GGTCTC 1 cut(s) 97
BsrBI CCGCTC 1 cut(s) 1254
BsrDI GCAATG 1 cut(s) 361
BsrFI RCCGGY 3 cut(s) 230, 284, 909
BsrGI TGTACA 1 cut(s) 1209
BsrI ACTGG 1 cut(s) 856
BssAI RCCGGY 3 cut(s) 230, 284, 909
BssECI CCNNGG 4 cut(s) 306, 1111, 1139, 1239
BssHII GCGCGC 2 cut(s) 867, 1134
BssMI GATC 4 cut(s) 639, 1030, 1063, 1321
BssNI GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
BssT1I CCWWGG 2 cut(s) 306, 1239
Bst2UI CCWGG 2 cut(s) 302, 793
Bst4CI ACNGT 9 cut(s) 28, 46, 325, 478, 592, 1024, 1105, 1277, 1396
Bst6I CTCTTC 1 cut(s) 607
BstACI GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
BstAUI TGTACA 1 cut(s) 1209
BstBAI YACGTR 2 cut(s) 893, 1390
BstC8I GCNNGC 7 cut(s) 232, 286, 450, 781, 869, 1136, 1193
BstDEI CTNAG 4 cut(s) 94, 636, 863, 904
BstDSI CCRYGG 1 cut(s) 1111
BstEII GGTNACC 1 cut(s) 439
BstENI CCTNNNNNAGG 1 cut(s) 388
BstF5I GGATG 5 cut(s) 267, 297, 939, 1005, 1239
BstFNI CGCG 5 cut(s) 585, 869, 995, 1113, 1136
BstH2I RGCGCY 5 cut(s) 291, 552, 883, 1173, 1343
BstKTI GATC 4 cut(s) 642, 1033, 1066, 1324
BstMAI GTCTC 4 cut(s) 97, 236, 804, 1340
BstMBI GATC 4 cut(s) 639, 1030, 1063, 1321
BstMCI CGRYCG 2 cut(s) 235, 432
BstMWI GCNNNNNNNGC 3 cut(s) 408, 868, 877
BstNI CCWGG 2 cut(s) 302, 793
BstPAI GACNNNNGTC 1 cut(s) 893
BstPI GGTNACC 1 cut(s) 439
BstSCI CCNGG 5 cut(s) 219, 300, 621, 791, 1294
BstSLI GKGCMC 1 cut(s) 1110
BstSNI TACGTA 1 cut(s) 1390
BstUI CGCG 5 cut(s) 585, 869, 995, 1113, 1136
BstV1I GCAGC 3 cut(s) 458, 883, 1056
BstV2I GAAGAC 2 cut(s) 454, 586
BstZI CGGCCG 2 cut(s) 232, 429
BsuRI GGCC 7 cut(s) 234, 305, 311, 411, 431, 633, 1244
BtgI CCRYGG 1 cut(s) 1111
BtgZI GCGATG 2 cut(s) 1000, 1383
BtsCI GGATG 5 cut(s) 267, 297, 939, 1005, 1239
BtsIMutI CAGTG 1 cut(s) 474
BveI ACCTGC 1 cut(s) 1056
Cac8I GCNNGC 7 cut(s) 232, 286, 450, 781, 869, 1136, 1193
CaiI CAGNNNCTG 1 cut(s) 862
CciI TCATGA 1 cut(s) 1042
Cfr10I RCCGGY 3 cut(s) 230, 284, 909
Cfr13I GGNCC 4 cut(s) 393, 501, 632, 912
Cfr42I CCGCGG 1 cut(s) 1114
CseI GACGC 2 cut(s) 290, 448
Csp6I GTAC 3 cut(s) 259, 1210, 1387
CspAI ACCGGT 1 cut(s) 909
CviAII CATG 4 cut(s) 106, 553, 1043, 1381
CviQI GTAC 3 cut(s) 259, 1210, 1387
DdeI CTNAG 4 cut(s) 94, 636, 863, 904
DinI GGCGCC 2 cut(s) 550, 1341
DpnI GATC 4 cut(s) 641, 1032, 1065, 1323
DpnII GATC 4 cut(s) 639, 1030, 1063, 1321
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 4 cut(s) 232, 409, 429, 1242
EagI CGGCCG 2 cut(s) 232, 429
Eam1104I CTCTTC 1 cut(s) 607
EarI CTCTTC 1 cut(s) 607
EciI GGCGGA 2 cut(s) 748, 814
Ecl136II GAGCTC 2 cut(s) 448, 1191
EclXI CGGCCG 2 cut(s) 232, 429
Eco105I TACGTA 1 cut(s) 1390
Eco130I CCWWGG 2 cut(s) 306, 1239
Eco24I GRGCYC 2 cut(s) 450, 1193
Eco31I GGTCTC 1 cut(s) 97
Eco32I GATATC 1 cut(s) 1284
Eco47I GGWCC 3 cut(s) 393, 501, 912
Eco52I CGGCCG 2 cut(s) 232, 429
Eco53kI GAGCTC 2 cut(s) 448, 1191
Eco72I CACGTG 1 cut(s) 893
Eco88I CYCGRG 1 cut(s) 807
Eco91I GGTNACC 1 cut(s) 439
EcoICRI GAGCTC 2 cut(s) 448, 1191
EcoNI CCTNNNNNAGG 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 501
EcoO65I GGTNACC 1 cut(s) 439
EcoRII CCWGG 2 cut(s) 300, 791
EcoRV GATATC 1 cut(s) 1284
EcoT14I CCWWGG 2 cut(s) 306, 1239
EcoT38I GRGCYC 2 cut(s) 450, 1193
EgeI GGCGCC 2 cut(s) 550, 1341
EheI GGCGCC 2 cut(s) 550, 1341
ErhI CCWWGG 2 cut(s) 306, 1239
Esp3I CGTCTC 2 cut(s) 236, 1340
FaeI CATG 4 cut(s) 109, 556, 1046, 1384
FaiI YATR 4 cut(s) 107, 554, 1044, 1382
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 5 cut(s) 341, 514, 565, 605, 1311
FatI CATG 4 cut(s) 105, 552, 1042, 1380
FauI CCCGC 3 cut(s) 590, 1158, 1348
FblI GTMKAC 1 cut(s) 327
Fnu4HI GCNGC 8 cut(s) 429, 472, 631, 735, 872, 949, 1070, 1114
FokI GGATG 5 cut(s) 254, 284, 946, 992, 1246
FriOI GRGCYC 2 cut(s) 450, 1193
Fsp4HI GCNGC 8 cut(s) 429, 472, 631, 735, 872, 949, 1070, 1114
FspBI CTAG 1 cut(s) 690
GluI GCNGC 8 cut(s) 429, 472, 631, 735, 872, 949, 1070, 1114
GsaI CCCAGC 2 cut(s) 1057, 1157
GsuI CTGGAG 3 cut(s) 980, 1346, 1382
HaeII RGCGCY 5 cut(s) 291, 552, 883, 1173, 1343
HaeIII GGCC 7 cut(s) 234, 305, 311, 411, 431, 633, 1244
HgaI GACGC 2 cut(s) 290, 448
Hin1I GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
Hin1II CATG 4 cut(s) 109, 556, 1046, 1384
HincII GTYRAC 2 cut(s) 328, 481
HindII GTYRAC 2 cut(s) 328, 481
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 7 cut(s) 211, 248, 695, 755, 796, 974, 997
HphI GGTGA 6 cut(s) 373, 433, 484, 634, 898, 952
Hpy166II GTNNAC 5 cut(s) 265, 328, 481, 943, 1108
Hpy188I TCNGA 9 cut(s) 97, 129, 253, 705, 719, 754, 933, 1002, 1206
Hpy188III TCNNGA 7 cut(s) 241, 772, 898, 988, 1009, 1043, 1325
Hpy8I GTNNAC 5 cut(s) 265, 328, 481, 943, 1108
HpyAV CCTTC 9 cut(s) 15, 110, 124, 517, 538, 620, 655, 769, 862
HpyCH4III ACNGT 9 cut(s) 28, 46, 325, 478, 592, 1024, 1105, 1277, 1396
HpyCH4IV ACGT 6 cut(s) 261, 354, 892, 926, 1080, 1389
HpyCH4V TGCA 6 cut(s) 42, 276, 474, 1072, 1108, 1384
HpyF10VI GCNNNNNNNGC 3 cut(s) 408, 868, 877
HpyF3I CTNAG 4 cut(s) 94, 636, 863, 904
HpySE526I ACGT 6 cut(s) 261, 354, 892, 926, 1080, 1389
Hsp92I GRCGYC 5 cut(s) 282, 354, 459, 549, 1340
Hsp92II CATG 4 cut(s) 109, 556, 1046, 1384
KasI GGCGCC 2 cut(s) 548, 1339
KroI GCCGGC 2 cut(s) 230, 284
KroNI GCCGGC 2 cut(s) 232, 286
KspI CCGCGG 1 cut(s) 1114
Kzo9I GATC 4 cut(s) 639, 1030, 1063, 1321
LmnI GCTCC 6 cut(s) 808, 827, 900, 961, 1188, 1251
Lsp1109I GCAGC 3 cut(s) 458, 883, 1056
LweI GCATC 2 cut(s) 1014, 1224
MaeI CTAG 1 cut(s) 690
MaeII ACGT 6 cut(s) 261, 354, 892, 926, 1080, 1389
MaeIII GTNAC 6 cut(s) 22, 439, 490, 740, 886, 1390
MalI GATC 4 cut(s) 641, 1032, 1065, 1323
MbiI CCGCTC 1 cut(s) 1254
MboI GATC 4 cut(s) 639, 1030, 1063, 1321
MboII GAAGA 9 cut(s) 3, 6, 9, 370, 454, 511, 586, 594, 979
MhlI GDGCHC 3 cut(s) 450, 1110, 1193
MluCI AATT 6 cut(s) 145, 178, 346, 675, 699, 713
Mly113I GGCGCC 2 cut(s) 549, 1340
MlyI GAGTC 3 cut(s) 205, 242, 968
MmeI TCCRAC 1 cut(s) 276
MreI CGCCGGCG 1 cut(s) 284
MroNI GCCGGC 2 cut(s) 230, 284
MroXI GAANNNNTTC 1 cut(s) 699
MseI TTAA 2 cut(s) 144, 665
MspA1I CMGCKG 2 cut(s) 1113, 1153
MspR9I CCNGG 5 cut(s) 221, 302, 623, 793, 1296
MvaI CCWGG 2 cut(s) 302, 793
MvnI CGCG 5 cut(s) 585, 869, 995, 1113, 1136
MwoI GCNNNNNNNGC 3 cut(s) 408, 868, 877
NaeI GCCGGC 2 cut(s) 232, 286
NarI GGCGCC 2 cut(s) 549, 1340
NciI CCSGG 3 cut(s) 221, 623, 1296
NdeII GATC 4 cut(s) 639, 1030, 1063, 1321
NgoMIV GCCGGC 2 cut(s) 230, 284
NlaIII CATG 4 cut(s) 109, 556, 1046, 1384
NlaIV GGNNCC 5 cut(s) 502, 550, 823, 963, 1341
NmeAIII GCCGAG 3 cut(s) 787, 1164, 1221
NmuCI GTSAC 4 cut(s) 22, 439, 490, 886
PagI TCATGA 1 cut(s) 1042
PauI GCGCGC 2 cut(s) 867, 1134
PcsI WCGNNNNNNNCGW 3 cut(s) 456, 750, 845
PdiI GCCGGC 2 cut(s) 232, 286
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 4 cut(s) 695, 755, 796, 997
PflFI GACNNNGTC 3 cut(s) 173, 458, 590
PflMI CCANNNNNTGG 1 cut(s) 958
PfoI TCCNGGA 2 cut(s) 621, 1294
PinAI ACCGGT 1 cut(s) 909
PkrI GCNGC 8 cut(s) 430, 473, 632, 736, 873, 950, 1071, 1115
PleI GAGTC 3 cut(s) 205, 242, 968
PluTI GGCGCC 2 cut(s) 552, 1343
PmaCI CACGTG 1 cut(s) 893
PmlI CACGTG 1 cut(s) 893
PpsI GAGTC 3 cut(s) 205, 242, 968
Ppu21I YACGTR 2 cut(s) 893, 1390
PpuMI RGGWCCY 1 cut(s) 501
PshAI GACNNNNGTC 1 cut(s) 893
Psp124BI GAGCTC 2 cut(s) 450, 1193
Psp5II RGGWCCY 1 cut(s) 501
Psp6I CCWGG 2 cut(s) 300, 791
PspCI CACGTG 1 cut(s) 893
PspEI GGTNACC 1 cut(s) 439
PspFI CCCAGC 2 cut(s) 1053, 1153
PspGI CCWGG 2 cut(s) 300, 791
PspN4I GGNNCC 5 cut(s) 502, 550, 823, 963, 1341
PspPI GGNCC 4 cut(s) 393, 501, 632, 912
PspPPI RGGWCCY 1 cut(s) 501
PstNI CAGNNNCTG 1 cut(s) 862
PsyI GACNNNGTC 3 cut(s) 173, 458, 590
PteI GCGCGC 2 cut(s) 867, 1134
RsaI GTAC 3 cut(s) 260, 1211, 1388
RsaNI GTAC 3 cut(s) 259, 1210, 1387
SacI GAGCTC 2 cut(s) 450, 1193
SacII CCGCGG 1 cut(s) 1114
SalI GTCGAC 1 cut(s) 326
SaqAI TTAA 2 cut(s) 144, 665
SatI GCNGC 8 cut(s) 429, 472, 631, 735, 872, 949, 1070, 1114
Sau3AI GATC 4 cut(s) 639, 1030, 1063, 1321
Sau96I GGNCC 4 cut(s) 393, 501, 632, 912
SchI GAGTC 3 cut(s) 205, 242, 968
ScrFI CCNGG 5 cut(s) 221, 302, 623, 793, 1296
SduI GDGCHC 3 cut(s) 450, 1110, 1193
SfaNI GCATC 2 cut(s) 1014, 1224
SfoI GGCGCC 2 cut(s) 550, 1341
Sfr303I CCGCGG 1 cut(s) 1114
SgrAI CRCCGGYG 1 cut(s) 284
SgrBI CCGCGG 1 cut(s) 1114
SgrDI CGTCGACG 1 cut(s) 326
SinI GGWCC 3 cut(s) 393, 501, 912
SmlI CTYRAG 2 cut(s) 80, 185
SmoI CTYRAG 2 cut(s) 80, 185
SnaBI TACGTA 1 cut(s) 1390
Sse9I AATT 6 cut(s) 145, 178, 346, 675, 699, 713
SspDI GGCGCC 2 cut(s) 548, 1339
SspMI CTAG 1 cut(s) 690
SstI GAGCTC 2 cut(s) 450, 1193
StyD4I CCNGG 5 cut(s) 219, 300, 621, 791, 1294
StyI CCWWGG 2 cut(s) 306, 1239
TaaI ACNGT 9 cut(s) 28, 46, 325, 478, 592, 1024, 1105, 1277, 1396
TaiI ACGT 6 cut(s) 264, 357, 895, 929, 1083, 1392
TaqI TCGA 4 cut(s) 240, 327, 1164, 1272
TaqII GACCGA 1 cut(s) 79
TasI AATT 6 cut(s) 145, 178, 346, 675, 699, 713
TatI WGTACW 1 cut(s) 1209
TauI GCSGC 5 cut(s) 431, 633, 737, 951, 1116
TfiI GAWTC 4 cut(s) 695, 755, 796, 997
Tru1I TTAA 2 cut(s) 144, 665
Tru9I TTAA 2 cut(s) 144, 665
TscAI CASTG 1 cut(s) 481
TseFI GTSAC 4 cut(s) 22, 439, 490, 886
TseI GCWGC 3 cut(s) 471, 871, 1069
Tsp45I GTSAC 4 cut(s) 22, 439, 490, 886
TspDTI ATGAA 4 cut(s) 286, 454, 569, 1369
TspGWI ACGGA 5 cut(s) 190, 260, 478, 854, 1326
TspRI CASTG 1 cut(s) 481
Tth111I GACNNNGTC 3 cut(s) 173, 458, 590
Van91I CCANNNNNTGG 1 cut(s) 958
VneI GTGCAC 1 cut(s) 1106
VpaK11BI GGWCC 3 cut(s) 393, 501, 912
XagI CCTNNNNNAGG 1 cut(s) 388
XapI RAATTY 2 cut(s) 675, 713
XmiI GTMKAC 1 cut(s) 327
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 1 cut(s) 690
ZraI GACGTC 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.