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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57990 |
| fragaria_vesca | FvH4_6g22460 |
| malus_domestica | MD12G1059200.v1.1 MD14G1058800.v1.1 |
| prunus_persica | Prupe.7G076000_v2.0.a1 |
| pyrus_communis | pycom12g05180 pycom14g04760 |
| rosa_chinensis | RchiOBHm_Chr3g0479871 |
| rosa_laevigata | RLG00000023529 |
| rosa_multiflora | Rmu_co8502759.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00401940 |
| rosa_rugosa | Rorug03G0179100 |
| rosa_samantha | Rh3AG230000 Rh3BG262700 Rh3CG260000 Rh3DG256100 |
| rosa_wichuraiana | Rw0G015260 Rw0G019240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 338 |
| AatII | GACGTC | 1 cut(s) | 554 |
| AccB1I | GGYRCC | 3 cut(s) | 221, 436, 556 |
| AccBSI | CCGCTC | 1 cut(s) | 624 |
| AccII | CGCG | 1 cut(s) | 165 |
| AccIII | TCCGGA | 1 cut(s) | 89 |
| AciI | CCGC | 8 cut(s) | 589, 611, 624, 641, 740, 743, 755, 785 |
| AclWI | GGATC | 4 cut(s) | 655, 698, 870, 949 |
| AcoI | YGGCCR | 2 cut(s) | 441, 513 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AcuI | CTGAAG | 1 cut(s) | 638 |
| AcvI | CACGTG | 2 cut(s) | 189, 700 |
| AcyI | GRCGYC | 3 cut(s) | 396, 437, 551 |
| AfaI | GTAC | 1 cut(s) | 908 |
| AfeI | AGCGCT | 1 cut(s) | 496 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 326, 670, 916 |
| AflIII | ACRYGT | 1 cut(s) | 186 |
| AgsI | TTSAA | 5 cut(s) | 277, 316, 718, 895, 994 |
| AjnI | CCWGG | 1 cut(s) | 669 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 797, 829 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 185, 217 |
| AluBI | AGCT | 7 cut(s) | 8, 118, 300, 585, 616, 737, 854 |
| AluI | AGCT | 7 cut(s) | 8, 118, 300, 585, 616, 737, 854 |
| Alw21I | GWGCWC | 2 cut(s) | 120, 699 |
| AlwI | GGATC | 4 cut(s) | 655, 698, 870, 949 |
| Ama87I | CYCGRG | 1 cut(s) | 380 |
| Aor13HI | TCCGGA | 1 cut(s) | 89 |
| Aor51HI | AGCGCT | 1 cut(s) | 496 |
| AoxI | GGCC | 6 cut(s) | 48, 73, 152, 426, 441, 513 |
| ApeKI | GCWGC | 2 cut(s) | 497, 737 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 197 |
| AspLEI | GCGC | 3 cut(s) | 269, 439, 497 |
| AspS9I | GGNCC | 4 cut(s) | 28, 48, 73, 152 |
| AsuC2I | CCSGG | 8 cut(s) | 23, 47, 151, 445, 463, 505, 529, 768 |
| AsuHPI | GGTGA | 5 cut(s) | 574, 592, 610, 685, 769 |
| AsuII | TTCGAA | 1 cut(s) | 144 |
| AvaI | CYCGRG | 1 cut(s) | 380 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BanI | GGYRCC | 3 cut(s) | 221, 436, 556 |
| BanII | GRGCYC | 1 cut(s) | 120 |
| BbrPI | CACGTG | 2 cut(s) | 189, 700 |
| Bbv12I | GWGCWC | 2 cut(s) | 120, 699 |
| BbvCI | CCTCAGC | 2 cut(s) | 62, 845 |
| BbvI | GCAGC | 2 cut(s) | 484, 724 |
| BccI | CCATC | 3 cut(s) | 526, 910, 1000 |
| BceAI | ACGGC | 5 cut(s) | 139, 409, 413, 560, 654 |
| BciT130I | CCWGG | 1 cut(s) | 671 |
| BcnI | CCSGG | 8 cut(s) | 23, 47, 151, 445, 463, 505, 529, 768 |
| BfaI | CTAG | 2 cut(s) | 297, 945 |
| BfoI | RGCGCY | 3 cut(s) | 270, 440, 498 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 434, 506 |
| BisI | GCNGC | 4 cut(s) | 498, 738, 741, 744 |
| BlsI | GCNGC | 4 cut(s) | 499, 739, 742, 745 |
| Bme1390I | CCNGG | 9 cut(s) | 23, 47, 151, 445, 463, 505, 529, 671, 768 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmeT110I | CYCGRG | 1 cut(s) | 380 |
| BmgT120I | GGNCC | 4 cut(s) | 28, 48, 73, 152 |
| BmiI | GGNNCC | 7 cut(s) | 194, 223, 229, 411, 438, 558, 606 |
| BmrFI | CCNGG | 9 cut(s) | 23, 47, 151, 445, 463, 505, 529, 671, 768 |
| BmsI | GCATC | 2 cut(s) | 75, 366 |
| Bpu10I | CCTNAGC | 2 cut(s) | 62, 845 |
| Bpu14I | TTCGAA | 1 cut(s) | 144 |
| BpuMI | CCSGG | 8 cut(s) | 23, 47, 151, 445, 463, 505, 529, 768 |
| BsaAI | YACGTR | 2 cut(s) | 189, 700 |
| BsaBI | GATNNNNATC | 1 cut(s) | 689 |
| BsaHI | GRCGYC | 3 cut(s) | 396, 437, 551 |
| BsaJI | CCNNGG | 8 cut(s) | 111, 232, 429, 444, 504, 576, 767, 910 |
| BsaWI | WCCGGW | 1 cut(s) | 89 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 440, 470 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 326, 670, 916 |
| Bse118I | RCCGGY | 6 cut(s) | 101, 218, 224, 439, 515, 559 |
| Bse8I | GATNNNNATC | 1 cut(s) | 689 |
| BseAI | TCCGGA | 1 cut(s) | 89 |
| BseBI | CCWGG | 1 cut(s) | 671 |
| BseDI | CCNNGG | 8 cut(s) | 111, 232, 429, 444, 504, 576, 767, 910 |
| BseGI | GGATG | 2 cut(s) | 537, 921 |
| BseJI | GATNNNNATC | 1 cut(s) | 689 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 326, 670, 916 |
| BseMII | CTCAG | 3 cut(s) | 76, 335, 836 |
| BseRI | GAGGAG | 4 cut(s) | 241, 272, 937, 1001 |
| BseX3I | CGGCCG | 1 cut(s) | 441 |
| BseXI | GCAGC | 2 cut(s) | 484, 724 |
| Bsh1236I | CGCG | 1 cut(s) | 165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 444 |
| BshFI | GGCC | 6 cut(s) | 50, 75, 154, 428, 443, 515 |
| BshNI | GGYRCC | 3 cut(s) | 221, 436, 556 |
| BsiEI | CGRYCG | 1 cut(s) | 444 |
| BsiHKAI | GWGCWC | 2 cut(s) | 120, 699 |
| BsiHKCI | CYCGRG | 1 cut(s) | 380 |
| BslFI | GGGAC | 3 cut(s) | 41, 344, 649 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 326, 670, 916 |
| BsmFI | GGGAC | 3 cut(s) | 41, 344, 649 |
| BsnI | GGCC | 6 cut(s) | 50, 75, 154, 428, 443, 515 |
| BsoBI | CYCGRG | 1 cut(s) | 380 |
| Bsp119I | TTCGAA | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 2 cut(s) | 120, 699 |
| Bsp13I | TCCGGA | 1 cut(s) | 89 |
| Bsp143I | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| BspACI | CCGC | 8 cut(s) | 589, 611, 624, 641, 740, 743, 755, 785 |
| BspANI | GGCC | 6 cut(s) | 50, 75, 154, 428, 443, 515 |
| BspCNI | CTCAG | 3 cut(s) | 75, 334, 837 |
| BspEI | TCCGGA | 1 cut(s) | 89 |
| BspFNI | CGCG | 1 cut(s) | 165 |
| BspHI | TCATGA | 1 cut(s) | 261 |
| BspLI | GGNNCC | 7 cut(s) | 194, 223, 229, 411, 438, 558, 606 |
| BspPI | GGATC | 4 cut(s) | 655, 698, 870, 949 |
| BspQI | GCTCTTC | 1 cut(s) | 614 |
| BspT104I | TTCGAA | 1 cut(s) | 144 |
| BspT107I | GGYRCC | 3 cut(s) | 221, 436, 556 |
| BsrBI | CCGCTC | 1 cut(s) | 624 |
| BsrFI | RCCGGY | 6 cut(s) | 101, 218, 224, 439, 515, 559 |
| BssAI | RCCGGY | 6 cut(s) | 101, 218, 224, 439, 515, 559 |
| BssECI | CCNNGG | 8 cut(s) | 111, 232, 429, 444, 504, 576, 767, 910 |
| BssMI | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| BssNI | GRCGYC | 3 cut(s) | 396, 437, 551 |
| BssT1I | CCWWGG | 1 cut(s) | 111 |
| Bst2UI | CCWGG | 1 cut(s) | 671 |
| Bst4CI | ACNGT | 4 cut(s) | 478, 707, 802, 911 |
| Bst6I | CTCTTC | 1 cut(s) | 614 |
| BstACI | GRCGYC | 3 cut(s) | 396, 437, 551 |
| BstBAI | YACGTR | 2 cut(s) | 189, 700 |
| BstBI | TTCGAA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 3 cut(s) | 103, 441, 587 |
| BstDEI | CTNAG | 3 cut(s) | 62, 321, 845 |
| BstDSI | CCRYGG | 3 cut(s) | 429, 576, 910 |
| BstF5I | GGATG | 2 cut(s) | 537, 921 |
| BstFNI | CGCG | 1 cut(s) | 165 |
| BstH2I | RGCGCY | 3 cut(s) | 270, 440, 498 |
| BstHHI | GCGC | 3 cut(s) | 269, 439, 497 |
| BstKTI | GATC | 6 cut(s) | 246, 663, 687, 693, 865, 944 |
| BstMBI | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| BstMCI | CGRYCG | 1 cut(s) | 444 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 72, 234, 385, 434, 506, 647, 743, 752 |
| BstNI | CCWGG | 1 cut(s) | 671 |
| BstSCI | CCNGG | 9 cut(s) | 21, 45, 149, 443, 461, 503, 527, 669, 766 |
| BstUI | CGCG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 2 cut(s) | 484, 724 |
| BstX2I | RGATCY | 3 cut(s) | 660, 862, 941 |
| BstYI | RGATCY | 3 cut(s) | 660, 862, 941 |
| BstZI | CGGCCG | 1 cut(s) | 441 |
| BsuRI | GGCC | 6 cut(s) | 50, 75, 154, 428, 443, 515 |
| BtgI | CCRYGG | 3 cut(s) | 429, 576, 910 |
| BtsCI | GGATG | 2 cut(s) | 537, 921 |
| BtsI | GCAGTG | 1 cut(s) | 38 |
| BtsIMutI | CAGTG | 3 cut(s) | 38, 798, 1001 |
| Cac8I | GCNNGC | 3 cut(s) | 103, 441, 587 |
| CciI | TCATGA | 1 cut(s) | 261 |
| CfoI | GCGC | 3 cut(s) | 269, 439, 497 |
| Cfr10I | RCCGGY | 6 cut(s) | 101, 218, 224, 439, 515, 559 |
| Cfr13I | GGNCC | 4 cut(s) | 28, 48, 73, 152 |
| CseI | GACGC | 3 cut(s) | 154, 385, 797 |
| Csp6I | GTAC | 1 cut(s) | 907 |
| CviAII | CATG | 3 cut(s) | 256, 262, 304 |
| CviQI | GTAC | 1 cut(s) | 907 |
| DdeI | CTNAG | 3 cut(s) | 62, 321, 845 |
| DinI | GGCGCC | 1 cut(s) | 438 |
| DpnI | GATC | 6 cut(s) | 245, 662, 686, 692, 864, 943 |
| DpnII | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 338 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 338 |
| EaeI | YGGCCR | 2 cut(s) | 441, 513 |
| EagI | CGGCCG | 1 cut(s) | 441 |
| Eam1104I | CTCTTC | 1 cut(s) | 614 |
| EarI | CTCTTC | 1 cut(s) | 614 |
| EciI | GGCGGA | 1 cut(s) | 626 |
| Ecl136II | GAGCTC | 1 cut(s) | 118 |
| EclXI | CGGCCG | 1 cut(s) | 441 |
| Eco130I | CCWWGG | 1 cut(s) | 111 |
| Eco24I | GRGCYC | 1 cut(s) | 120 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| Eco47III | AGCGCT | 1 cut(s) | 496 |
| Eco52I | CGGCCG | 1 cut(s) | 441 |
| Eco53kI | GAGCTC | 1 cut(s) | 118 |
| Eco57I | CTGAAG | 1 cut(s) | 638 |
| Eco72I | CACGTG | 2 cut(s) | 189, 700 |
| Eco88I | CYCGRG | 1 cut(s) | 380 |
| EcoICRI | GAGCTC | 1 cut(s) | 118 |
| EcoRII | CCWGG | 1 cut(s) | 669 |
| EcoT14I | CCWWGG | 1 cut(s) | 111 |
| EcoT38I | GRGCYC | 1 cut(s) | 120 |
| EgeI | GGCGCC | 1 cut(s) | 438 |
| EheI | GGCGCC | 1 cut(s) | 438 |
| ErhI | CCWWGG | 1 cut(s) | 111 |
| FaeI | CATG | 3 cut(s) | 259, 265, 307 |
| FaiI | YATR | 4 cut(s) | 257, 263, 305, 633 |
| FaqI | GGGAC | 3 cut(s) | 41, 344, 649 |
| FatI | CATG | 3 cut(s) | 255, 261, 303 |
| FauI | CCCGC | 1 cut(s) | 634 |
| Fnu4HI | GCNGC | 4 cut(s) | 498, 738, 741, 744 |
| FokI | GGATG | 2 cut(s) | 544, 928 |
| FriOI | GRGCYC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 4 cut(s) | 498, 738, 741, 744 |
| FspBI | CTAG | 2 cut(s) | 297, 945 |
| GlaI | GCGC | 3 cut(s) | 268, 438, 496 |
| GluI | GCNGC | 4 cut(s) | 498, 738, 741, 744 |
| HaeII | RGCGCY | 3 cut(s) | 270, 440, 498 |
| HaeIII | GGCC | 6 cut(s) | 50, 75, 154, 428, 443, 515 |
| HgaI | GACGC | 3 cut(s) | 154, 385, 797 |
| HhaI | GCGC | 3 cut(s) | 269, 439, 497 |
| Hin1I | GRCGYC | 3 cut(s) | 396, 437, 551 |
| Hin1II | CATG | 3 cut(s) | 259, 265, 307 |
| Hin6I | GCGC | 3 cut(s) | 267, 437, 495 |
| HinP1I | GCGC | 3 cut(s) | 267, 437, 495 |
| HindIII | AAGCTT | 1 cut(s) | 6 |
| HinfI | GANTC | 4 cut(s) | 93, 107, 146, 568 |
| HphI | GGTGA | 5 cut(s) | 574, 592, 610, 685, 769 |
| Hpy166II | GTNNAC | 1 cut(s) | 703 |
| Hpy188I | TCNGA | 3 cut(s) | 243, 417, 657 |
| Hpy188III | TCNNGA | 5 cut(s) | 90, 214, 262, 343, 688 |
| Hpy8I | GTNNAC | 1 cut(s) | 703 |
| Hpy99I | CGWCG | 7 cut(s) | 101, 170, 212, 355, 401, 421, 556 |
| HpyAV | CCTTC | 5 cut(s) | 91, 148, 208, 712, 991 |
| HpyCH4III | ACNGT | 4 cut(s) | 478, 707, 802, 911 |
| HpyCH4IV | ACGT | 4 cut(s) | 188, 551, 699, 761 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 72, 234, 385, 434, 506, 647, 743, 752 |
| HpyF3I | CTNAG | 3 cut(s) | 62, 321, 845 |
| HpySE526I | ACGT | 4 cut(s) | 188, 551, 699, 761 |
| Hsp92I | GRCGYC | 3 cut(s) | 396, 437, 551 |
| Hsp92II | CATG | 3 cut(s) | 259, 265, 307 |
| HspAI | GCGC | 3 cut(s) | 267, 437, 495 |
| KasI | GGCGCC | 1 cut(s) | 436 |
| Kpn2I | TCCGGA | 1 cut(s) | 89 |
| KroI | GCCGGC | 2 cut(s) | 101, 439 |
| KroNI | GCCGGC | 2 cut(s) | 103, 441 |
| Kzo9I | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| LguI | GCTCTTC | 1 cut(s) | 614 |
| LmnI | GCTCC | 6 cut(s) | 48, 115, 233, 312, 409, 613 |
| Lsp1109I | GCAGC | 2 cut(s) | 484, 724 |
| LweI | GCATC | 2 cut(s) | 75, 366 |
| MaeI | CTAG | 2 cut(s) | 297, 945 |
| MaeII | ACGT | 4 cut(s) | 188, 551, 699, 761 |
| MaeIII | GTNAC | 1 cut(s) | 757 |
| MalI | GATC | 6 cut(s) | 245, 662, 686, 692, 864, 943 |
| MbiI | CCGCTC | 1 cut(s) | 624 |
| MboI | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| MboII | GAAGA | 7 cut(s) | 133, 478, 631, 670, 857, 970, 1006 |
| MflI | RGATCY | 3 cut(s) | 660, 862, 941 |
| MhlI | GDGCHC | 2 cut(s) | 120, 699 |
| MluCI | AATT | 4 cut(s) | 17, 471, 895, 934 |
| Mly113I | GGCGCC | 1 cut(s) | 437 |
| MlyI | GAGTC | 1 cut(s) | 116 |
| MmeI | TCCRAC | 2 cut(s) | 440, 795 |
| MreI | CGCCGGCG | 1 cut(s) | 101 |
| MroI | TCCGGA | 1 cut(s) | 89 |
| MroNI | GCCGGC | 2 cut(s) | 101, 439 |
| MroXI | GAANNNNTTC | 1 cut(s) | 197 |
| MseI | TTAA | 1 cut(s) | 423 |
| MslI | CAYNNNNRTG | 1 cut(s) | 260 |
| MspR9I | CCNGG | 9 cut(s) | 23, 47, 151, 445, 463, 505, 529, 671, 768 |
| MvaI | CCWGG | 1 cut(s) | 671 |
| MvnI | CGCG | 1 cut(s) | 165 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 72, 234, 385, 434, 506, 647, 743, 752 |
| NaeI | GCCGGC | 2 cut(s) | 103, 441 |
| NarI | GGCGCC | 1 cut(s) | 437 |
| NciI | CCSGG | 8 cut(s) | 23, 47, 151, 445, 463, 505, 529, 768 |
| NdeII | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| NgoMIV | GCCGGC | 2 cut(s) | 101, 439 |
| NlaIII | CATG | 3 cut(s) | 259, 265, 307 |
| NlaIV | GGNNCC | 7 cut(s) | 194, 223, 229, 411, 438, 558, 606 |
| NmeAIII | GCCGAG | 2 cut(s) | 213, 295 |
| NmuCI | GTSAC | 1 cut(s) | 757 |
| NspV | TTCGAA | 1 cut(s) | 144 |
| PagI | TCATGA | 1 cut(s) | 261 |
| PciSI | GCTCTTC | 1 cut(s) | 614 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 102, 356, 548 |
| PdiI | GCCGGC | 2 cut(s) | 103, 441 |
| PdmI | GAANNNNTTC | 1 cut(s) | 197 |
| PfeI | GAWTC | 3 cut(s) | 93, 146, 568 |
| PflFI | GACNNNGTC | 1 cut(s) | 395 |
| PfoI | TCCNGGA | 3 cut(s) | 21, 461, 527 |
| PkrI | GCNGC | 4 cut(s) | 499, 739, 742, 745 |
| PleI | GAGTC | 1 cut(s) | 115 |
| PluTI | GGCGCC | 1 cut(s) | 440 |
| PmaCI | CACGTG | 2 cut(s) | 189, 700 |
| PmlI | CACGTG | 2 cut(s) | 189, 700 |
| PpsI | GAGTC | 1 cut(s) | 115 |
| Ppu21I | YACGTR | 2 cut(s) | 189, 700 |
| Psp124BI | GAGCTC | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 669 |
| PspCI | CACGTG | 2 cut(s) | 189, 700 |
| PspGI | CCWGG | 1 cut(s) | 669 |
| PspN4I | GGNNCC | 7 cut(s) | 194, 223, 229, 411, 438, 558, 606 |
| PspPI | GGNCC | 4 cut(s) | 28, 48, 73, 152 |
| PsuI | RGATCY | 3 cut(s) | 660, 862, 941 |
| PsyI | GACNNNGTC | 1 cut(s) | 395 |
| RsaI | GTAC | 1 cut(s) | 908 |
| RsaNI | GTAC | 1 cut(s) | 907 |
| RseI | CAYNNNNRTG | 1 cut(s) | 260 |
| SacI | GAGCTC | 1 cut(s) | 120 |
| SapI | GCTCTTC | 1 cut(s) | 614 |
| SaqAI | TTAA | 1 cut(s) | 423 |
| SatI | GCNGC | 4 cut(s) | 498, 738, 741, 744 |
| Sau3AI | GATC | 6 cut(s) | 243, 660, 684, 690, 862, 941 |
| Sau96I | GGNCC | 4 cut(s) | 28, 48, 73, 152 |
| SchI | GAGTC | 1 cut(s) | 116 |
| ScrFI | CCNGG | 9 cut(s) | 23, 47, 151, 445, 463, 505, 529, 671, 768 |
| SduI | GDGCHC | 2 cut(s) | 120, 699 |
| SfaNI | GCATC | 2 cut(s) | 75, 366 |
| SfoI | GGCGCC | 1 cut(s) | 438 |
| SfuI | TTCGAA | 1 cut(s) | 144 |
| SgrAI | CRCCGGYG | 1 cut(s) | 101 |
| SinI | GGWCC | 1 cut(s) | 28 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 260 |
| Sse9I | AATT | 4 cut(s) | 17, 471, 895, 934 |
| SsiI | CCGC | 8 cut(s) | 589, 611, 624, 641, 740, 743, 755, 785 |
| SspDI | GGCGCC | 1 cut(s) | 436 |
| SspMI | CTAG | 2 cut(s) | 297, 945 |
| SstI | GAGCTC | 1 cut(s) | 120 |
| StyD4I | CCNGG | 9 cut(s) | 21, 45, 149, 443, 461, 503, 527, 669, 766 |
| StyI | CCWWGG | 1 cut(s) | 111 |
| TaaI | ACNGT | 4 cut(s) | 478, 707, 802, 911 |
| TaiI | ACGT | 4 cut(s) | 191, 554, 702, 764 |
| TaqI | TCGA | 2 cut(s) | 144, 693 |
| TasI | AATT | 4 cut(s) | 17, 471, 895, 934 |
| TauI | GCSGC | 2 cut(s) | 743, 746 |
| TfiI | GAWTC | 3 cut(s) | 93, 146, 568 |
| Tru1I | TTAA | 1 cut(s) | 423 |
| Tru9I | TTAA | 1 cut(s) | 423 |
| TscAI | CASTG | 3 cut(s) | 45, 805, 1008 |
| TseFI | GTSAC | 1 cut(s) | 757 |
| TseI | GCWGC | 2 cut(s) | 497, 737 |
| Tsp45I | GTSAC | 1 cut(s) | 757 |
| TspDTI | ATGAA | 3 cut(s) | 17, 292, 692 |
| TspGWI | ACGGA | 1 cut(s) | 328 |
| TspRI | CASTG | 3 cut(s) | 45, 805, 1008 |
| Tth111I | GACNNNGTC | 1 cut(s) | 395 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XmnI | GAANNNNTTC | 1 cut(s) | 197 |
| XspI | CTAG | 2 cut(s) | 297, 945 |
| ZraI | GACGTC | 1 cut(s) | 552 |