Prupe.7G076000_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
11286457 .. 11288287
1831 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G076000.1

Sequence Viewer

Length: 996 bp
ATGAAAGCTTCGGTCAAATTCCGCGAGGATCAGAAGCCATTGTTGAGGGCCAAGGTGCCCCTCAGCATATTGGGCCTGCCTTTTCAATCTGGAATCGTTGCCGGCGAGTCTAAGGAGCTCACTCTCAACCTCGGCACCTTCTTCGAATCCGGACCCTCCATCCGGGTCGGTTACCGGCCGAATGACTCGTCCAACCCATTCTCCCTCGTCGTCAAGACTGGGACCGGTCCCTTCGGCTCGCCGATCTCCAGTTCCATGCTCATGAGCGCCGAGTTCAATCTGCTCGGCAGCGGGAAAAACCCTAGCTTCATGCTCCACTTCAAGCCTCAGTTCGGAGACTTCTCGATCAAGAAGTCGCAGTCCTCTGTCTTTCAAAAAATCGTAAGTCCAGCTGACGGCGTCGTTTCGGCGGAGACACCAGCAGTGGATACTGCGTTTATGGGGAAGAAAATCACGGTTTTGCCCTCGGAAAATCAAGTGGCCGGAATTCTCGCCGGTGTGTTTTCCGGCGTGGAAATGGCGGCGAGGACGTCGATGCCGGTGTGGAACCGGGGGGTGGTGAACTTGCGGTGGGGGGTTAGGGTGCCGGCGGAGATGAAGAGTACTGGGGCTAATCCGATTGCGTTTCACAAGATCCCGTTCCTGGTGATGAACAAGATCGGGATCGAACACGTGGACGTTGCAGATTCGAAGGGTAAAACCACGAAGGCAGCAGAGATGGAAAAGGGATTGACATTTCCGGGAAATGCCGAGGTGGCGGAGGCTTGCTTCACGGTGAAGCGTCAGCTGGAGGCTTTACAGAGCGAGAACGGGTTGCTGAGAAAGGCTGTGGAGGATCTCAGGCAGGAAATCGCCGGCGCCACAAAGTCGATTTCAAATTCAGGCAATATTGGGGGCAGGAATTCTGGCGGGAAAGTTGACTGGCGGTCAAACAGCGAGAAAGGGCCGTCGGAGGGTGATGTGAGTGAGGAATTGAAGAAGGCACTCAATCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

332

Amino Acids

35.36

Weight (kDa)

9.46

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013312)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 533
AccB1I GGYRCC 4 cut(s) 55, 134, 583, 857
AccII CGCG 1 cut(s) 24
AccIII TCCGGA 1 cut(s) 149
AciI CCGC 9 cut(s) 22, 291, 410, 521, 568, 590, 758, 909, 925
AclWI GGATC 4 cut(s) 36, 628, 671, 843
AcoI YGGCCR 2 cut(s) 176, 480
AcsI RAATTY 4 cut(s) 17, 486, 877, 901
AcvI CACGTG 1 cut(s) 673
AcyI GRCGYC 3 cut(s) 399, 530, 858
AfaI GTAC 1 cut(s) 604
AfiI CCNNNNNNNGG 6 cut(s) 162, 332, 395, 556, 643, 953
AflIII ACRYGT 1 cut(s) 670
AgeI ACCGGT 1 cut(s) 224
AgsI TTSAA 6 cut(s) 86, 277, 322, 374, 876, 976
AhdI GACNNNNNGTC 1 cut(s) 925
AjnI CCWGG 1 cut(s) 642
AluBI AGCT 5 cut(s) 8, 118, 306, 392, 787
AluI AGCT 5 cut(s) 8, 118, 306, 392, 787
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 2 cut(s) 330, 407
AlwI GGATC 4 cut(s) 36, 628, 671, 843
Aor13HI TCCGGA 1 cut(s) 149
AoxI GGCC 5 cut(s) 48, 73, 176, 480, 944
ApeKI GCWGC 2 cut(s) 288, 710
ApoI RAATTY 4 cut(s) 17, 486, 877, 901
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
AsiGI ACCGGT 1 cut(s) 224
AspLEI GCGC 2 cut(s) 269, 860
AspS9I GGNCC 6 cut(s) 48, 73, 152, 222, 227, 944
AsuC2I CCSGG 3 cut(s) 164, 551, 741
AsuHPI GGTGA 4 cut(s) 571, 658, 787, 968
AsuII TTCGAA 2 cut(s) 144, 689
AvaII GGWCC 3 cut(s) 152, 222, 227
BaeGI GKGCMC 1 cut(s) 60
BanI GGYRCC 4 cut(s) 55, 134, 583, 857
BanII GRGCYC 1 cut(s) 120
BbrPI CACGTG 1 cut(s) 673
Bbv12I GWGCWC 1 cut(s) 120
BbvCI CCTCAGC 1 cut(s) 62
BbvI GCAGC 2 cut(s) 300, 722
BccI CCATC 2 cut(s) 167, 712
BceAI ACGGC 2 cut(s) 412, 931
BcgI CGANNNNNNTGC 2 cut(s) 124, 158
BciT130I CCWGG 1 cut(s) 644
BciVI GTATCC 1 cut(s) 421
BcnI CCSGG 3 cut(s) 164, 551, 741
BcoDI GTCTC 2 cut(s) 330, 407
BfaI CTAG 1 cut(s) 303
BfoI RGCGCY 2 cut(s) 270, 861
BfuI GTATCC 1 cut(s) 421
BglI GCCNNNNNGGC 1 cut(s) 755
BisI GCNGC 3 cut(s) 289, 522, 711
BlsI GCNGC 3 cut(s) 290, 523, 712
BmcAI AGTACT 1 cut(s) 604
Bme1390I CCNGG 4 cut(s) 164, 551, 644, 741
Bme18I GGWCC 3 cut(s) 152, 222, 227
BmeRI GACNNNNNGTC 1 cut(s) 925
BmgT120I GGNCC 6 cut(s) 48, 73, 152, 222, 227, 944
BmiI GGNNCC 8 cut(s) 57, 136, 154, 223, 229, 548, 585, 859
BmrFI CCNGG 4 cut(s) 164, 551, 644, 741
BmrI ACTGGG 2 cut(s) 228, 615
BmsI GCATC 1 cut(s) 525
BmuI ACTGGG 2 cut(s) 228, 615
BpmI CTGGAG 2 cut(s) 232, 809
Bpu10I CCTNAGC 1 cut(s) 62
Bpu14I TTCGAA 2 cut(s) 144, 689
BpuMI CCSGG 3 cut(s) 164, 551, 741
BsaAI YACGTR 1 cut(s) 673
BsaBI GATNNNNATC 1 cut(s) 662
BsaHI GRCGYC 3 cut(s) 399, 530, 858
BsaJI CCNNGG 5 cut(s) 51, 130, 465, 550, 750
BsaWI WCCGGW 2 cut(s) 149, 224
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 6 cut(s) 162, 332, 395, 556, 643, 953
Bse118I RCCGGY 7 cut(s) 101, 174, 224, 494, 538, 586, 854
Bse1I ACTGG 4 cut(s) 223, 249, 610, 926
Bse8I GATNNNNATC 1 cut(s) 662
BseAI TCCGGA 1 cut(s) 149
BseBI CCWGG 1 cut(s) 644
BseDI CCNNGG 5 cut(s) 51, 130, 465, 550, 750
BseGI GGATG 1 cut(s) 159
BseJI GATNNNNATC 1 cut(s) 662
BseLI CCNNNNNNNGG 6 cut(s) 162, 332, 395, 556, 643, 953
BseMII CTCAG 4 cut(s) 76, 341, 809, 853
BseNI ACTGG 4 cut(s) 223, 249, 610, 926
BseSI GKGCMC 1 cut(s) 60
BseX3I CGGCCG 1 cut(s) 176
BseXI GCAGC 2 cut(s) 300, 722
Bsh1236I CGCG 1 cut(s) 24
Bsh1285I CGRYCG 1 cut(s) 179
BshFI GGCC 5 cut(s) 50, 75, 178, 482, 946
BshNI GGYRCC 4 cut(s) 55, 134, 583, 857
BshTI ACCGGT 1 cut(s) 224
BsiEI CGRYCG 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 120
BslFI GGGAC 2 cut(s) 213, 235
BslI CCNNNNNNNGG 6 cut(s) 162, 332, 395, 556, 643, 953
BsmAI GTCTC 2 cut(s) 330, 407
BsmFI GGGAC 2 cut(s) 213, 235
BsnI GGCC 5 cut(s) 50, 75, 178, 482, 946
Bsp119I TTCGAA 2 cut(s) 144, 689
Bsp1286I GDGCHC 2 cut(s) 60, 120
Bsp13I TCCGGA 1 cut(s) 149
Bsp143I GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
BspACI CCGC 9 cut(s) 22, 291, 410, 521, 568, 590, 758, 909, 925
BspANI GGCC 5 cut(s) 50, 75, 178, 482, 946
BspCNI CTCAG 4 cut(s) 75, 340, 810, 852
BspEI TCCGGA 1 cut(s) 149
BspFNI CGCG 1 cut(s) 24
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 8 cut(s) 57, 136, 154, 223, 229, 548, 585, 859
BspPI GGATC 4 cut(s) 36, 628, 671, 843
BspT104I TTCGAA 2 cut(s) 144, 689
BspT107I GGYRCC 4 cut(s) 55, 134, 583, 857
BsrFI RCCGGY 7 cut(s) 101, 174, 224, 494, 538, 586, 854
BsrI ACTGG 4 cut(s) 223, 249, 610, 926
BssAI RCCGGY 7 cut(s) 101, 174, 224, 494, 538, 586, 854
BssECI CCNNGG 5 cut(s) 51, 130, 465, 550, 750
BssMI GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
BssNI GRCGYC 3 cut(s) 399, 530, 858
BssT1I CCWWGG 1 cut(s) 51
Bst2UI CCWGG 1 cut(s) 644
Bst4CI ACNGT 2 cut(s) 457, 775
Bst6I CTCTTC 1 cut(s) 593
BstACI GRCGYC 3 cut(s) 399, 530, 858
BstBAI YACGTR 1 cut(s) 673
BstBI TTCGAA 2 cut(s) 144, 689
BstC8I GCNNGC 6 cut(s) 77, 103, 239, 588, 766, 856
BstDEI CTNAG 5 cut(s) 62, 111, 327, 818, 839
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 1 cut(s) 159
BstFNI CGCG 1 cut(s) 24
BstH2I RGCGCY 2 cut(s) 270, 861
BstHHI GCGC 2 cut(s) 269, 860
BstKTI GATC 7 cut(s) 31, 246, 348, 636, 660, 666, 838
BstMAI GTCTC 2 cut(s) 330, 407
BstMBI GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
BstMCI CGRYCG 1 cut(s) 179
BstMWI GCNNNNNNNGC 2 cut(s) 72, 755
BstNI CCWGG 1 cut(s) 644
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 4 cut(s) 162, 549, 642, 739
BstSLI GKGCMC 1 cut(s) 60
BstUI CGCG 1 cut(s) 24
BstV1I GCAGC 2 cut(s) 300, 722
BstX2I RGATCY 2 cut(s) 633, 835
BstYI RGATCY 2 cut(s) 633, 835
BstZI CGGCCG 1 cut(s) 176
BsuI GTATCC 1 cut(s) 421
BsuRI GGCC 5 cut(s) 50, 75, 178, 482, 946
BtsCI GGATG 1 cut(s) 159
BtsI GCAGTG 1 cut(s) 429
BtsIMutI CAGTG 2 cut(s) 429, 991
Cac8I GCNNGC 6 cut(s) 77, 103, 239, 588, 766, 856
CciI TCATGA 1 cut(s) 261
CfoI GCGC 2 cut(s) 269, 860
Cfr10I RCCGGY 7 cut(s) 101, 174, 224, 494, 538, 586, 854
Cfr13I GGNCC 6 cut(s) 48, 73, 152, 222, 227, 944
CseI GACGC 2 cut(s) 388, 770
Csp6I GTAC 1 cut(s) 603
CspAI ACCGGT 1 cut(s) 224
CviAII CATG 3 cut(s) 256, 262, 310
CviQI GTAC 1 cut(s) 603
DdeI CTNAG 5 cut(s) 62, 111, 327, 818, 839
DinI GGCGCC 1 cut(s) 859
DpnI GATC 7 cut(s) 30, 245, 347, 635, 659, 665, 837
DpnII GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
DriI GACNNNNNGTC 1 cut(s) 925
EaeI YGGCCR 2 cut(s) 176, 480
EagI CGGCCG 1 cut(s) 176
Eam1104I CTCTTC 1 cut(s) 593
Eam1105I GACNNNNNGTC 1 cut(s) 925
EarI CTCTTC 1 cut(s) 593
EciI GGCGGA 3 cut(s) 425, 605, 773
Ecl136II GAGCTC 1 cut(s) 118
EclXI CGGCCG 1 cut(s) 176
Eco130I CCWWGG 1 cut(s) 51
Eco24I GRGCYC 1 cut(s) 120
Eco47I GGWCC 3 cut(s) 152, 222, 227
Eco52I CGGCCG 1 cut(s) 176
Eco53kI GAGCTC 1 cut(s) 118
Eco72I CACGTG 1 cut(s) 673
Eco91I GGTNACC 1 cut(s) 170
EcoICRI GAGCTC 1 cut(s) 118
EcoO65I GGTNACC 1 cut(s) 170
EcoRI GAATTC 2 cut(s) 486, 901
EcoRII CCWGG 1 cut(s) 642
EcoT14I CCWWGG 1 cut(s) 51
EcoT38I GRGCYC 1 cut(s) 120
EgeI GGCGCC 1 cut(s) 859
EheI GGCGCC 1 cut(s) 859
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 3 cut(s) 259, 265, 313
FaiI YATR 5 cut(s) 68, 257, 263, 311, 440
FaqI GGGAC 2 cut(s) 213, 235
FatI CATG 3 cut(s) 255, 261, 309
FauI CCCGC 2 cut(s) 284, 902
Fnu4HI GCNGC 3 cut(s) 289, 522, 711
FokI GGATG 1 cut(s) 146
FriOI GRGCYC 1 cut(s) 120
Fsp4HI GCNGC 3 cut(s) 289, 522, 711
FspBI CTAG 1 cut(s) 303
GlaI GCGC 2 cut(s) 268, 859
GluI GCNGC 3 cut(s) 289, 522, 711
GsuI CTGGAG 2 cut(s) 232, 809
HaeII RGCGCY 2 cut(s) 270, 861
HaeIII GGCC 5 cut(s) 50, 75, 178, 482, 946
HgaI GACGC 2 cut(s) 388, 770
HhaI GCGC 2 cut(s) 269, 860
Hin1I GRCGYC 3 cut(s) 399, 530, 858
Hin1II CATG 3 cut(s) 259, 265, 313
Hin6I GCGC 2 cut(s) 267, 858
HinP1I GCGC 2 cut(s) 267, 858
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 5 cut(s) 93, 107, 146, 185, 686
HphI GGTGA 4 cut(s) 571, 658, 787, 968
Hpy166II GTNNAC 3 cut(s) 562, 676, 919
Hpy188I TCNGA 5 cut(s) 33, 335, 469, 618, 952
Hpy188III TCNNGA 7 cut(s) 90, 150, 214, 262, 343, 349, 661
Hpy8I GTNNAC 3 cut(s) 562, 676, 919
Hpy99I CGWCG 4 cut(s) 212, 404, 535, 952
HpyAV CCTTC 5 cut(s) 148, 241, 685, 700, 973
HpyCH4III ACNGT 2 cut(s) 457, 775
HpyCH4IV ACGT 3 cut(s) 530, 672, 678
HpyCH4V TGCA 1 cut(s) 683
HpyF10VI GCNNNNNNNGC 2 cut(s) 72, 755
HpyF3I CTNAG 5 cut(s) 62, 111, 327, 818, 839
HpySE526I ACGT 3 cut(s) 530, 672, 678
Hsp92I GRCGYC 3 cut(s) 399, 530, 858
Hsp92II CATG 3 cut(s) 259, 265, 313
HspAI GCGC 2 cut(s) 267, 858
KasI GGCGCC 1 cut(s) 857
Kpn2I TCCGGA 1 cut(s) 149
KroI GCCGGC 3 cut(s) 101, 586, 854
KroNI GCCGGC 3 cut(s) 103, 588, 856
Kzo9I GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
LmnI GCTCC 2 cut(s) 115, 318
Lsp1109I GCAGC 2 cut(s) 300, 722
LweI GCATC 1 cut(s) 525
MaeI CTAG 1 cut(s) 303
MaeII ACGT 3 cut(s) 530, 672, 678
MaeIII GTNAC 1 cut(s) 170
MalI GATC 7 cut(s) 30, 245, 347, 635, 659, 665, 837
MboI GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
MboII GAAGA 4 cut(s) 133, 457, 610, 988
MflI RGATCY 2 cut(s) 633, 835
MhlI GDGCHC 2 cut(s) 60, 120
MluCI AATT 5 cut(s) 17, 486, 877, 901, 971
Mly113I GGCGCC 1 cut(s) 858
MlyI GAGTC 2 cut(s) 116, 179
MmeI TCCRAC 2 cut(s) 216, 930
MreI CGCCGGCG 1 cut(s) 854
MroI TCCGGA 1 cut(s) 149
MroNI GCCGGC 3 cut(s) 101, 586, 854
MslI CAYNNNNRTG 1 cut(s) 260
MspA1I CMGCKG 3 cut(s) 291, 392, 787
MspR9I CCNGG 4 cut(s) 164, 551, 644, 741
MvaI CCWGG 1 cut(s) 644
MvnI CGCG 1 cut(s) 24
MwoI GCNNNNNNNGC 2 cut(s) 72, 755
NaeI GCCGGC 3 cut(s) 103, 588, 856
NarI GGCGCC 1 cut(s) 858
NciI CCSGG 3 cut(s) 164, 551, 741
NdeII GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
NgoMIV GCCGGC 3 cut(s) 101, 586, 854
NlaIII CATG 3 cut(s) 259, 265, 313
NlaIV GGNNCC 8 cut(s) 57, 136, 154, 223, 229, 548, 585, 859
NmeAIII GCCGAG 4 cut(s) 111, 264, 295, 775
NspV TTCGAA 2 cut(s) 144, 689
PagI TCATGA 1 cut(s) 261
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PdiI GCCGGC 3 cut(s) 103, 588, 856
PfeI GAWTC 3 cut(s) 93, 146, 686
PflFI GACNNNGTC 1 cut(s) 398
PfoI TCCNGGA 1 cut(s) 739
PinAI ACCGGT 1 cut(s) 224
PkrI GCNGC 3 cut(s) 290, 523, 712
PleI GAGTC 2 cut(s) 115, 179
PluTI GGCGCC 1 cut(s) 861
PmaCI CACGTG 1 cut(s) 673
PmlI CACGTG 1 cut(s) 673
PpsI GAGTC 2 cut(s) 115, 179
Ppu21I YACGTR 1 cut(s) 673
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 1 cut(s) 642
PspCI CACGTG 1 cut(s) 673
PspEI GGTNACC 1 cut(s) 170
PspGI CCWGG 1 cut(s) 642
PspN4I GGNNCC 8 cut(s) 57, 136, 154, 223, 229, 548, 585, 859
PspPI GGNCC 6 cut(s) 48, 73, 152, 222, 227, 944
PsuI RGATCY 2 cut(s) 633, 835
PsyI GACNNNGTC 1 cut(s) 398
PvuII CAGCTG 2 cut(s) 392, 787
RsaI GTAC 1 cut(s) 604
RsaNI GTAC 1 cut(s) 603
RseI CAYNNNNRTG 1 cut(s) 260
SacI GAGCTC 1 cut(s) 120
SatI GCNGC 3 cut(s) 289, 522, 711
Sau3AI GATC 7 cut(s) 28, 243, 345, 633, 657, 663, 835
Sau96I GGNCC 6 cut(s) 48, 73, 152, 222, 227, 944
ScaI AGTACT 1 cut(s) 604
SchI GAGTC 2 cut(s) 116, 179
ScrFI CCNGG 4 cut(s) 164, 551, 644, 741
SduI GDGCHC 2 cut(s) 60, 120
SfaNI GCATC 1 cut(s) 525
SfoI GGCGCC 1 cut(s) 859
SfuI TTCGAA 2 cut(s) 144, 689
SgrAI CRCCGGYG 2 cut(s) 494, 854
SinI GGWCC 3 cut(s) 152, 222, 227
SmiMI CAYNNNNRTG 1 cut(s) 260
Sse9I AATT 5 cut(s) 17, 486, 877, 901, 971
SsiI CCGC 9 cut(s) 22, 291, 410, 521, 568, 590, 758, 909, 925
SspDI GGCGCC 1 cut(s) 857
SspI AATATT 1 cut(s) 889
SspMI CTAG 1 cut(s) 303
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 4 cut(s) 162, 549, 642, 739
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 2 cut(s) 457, 775
TaiI ACGT 3 cut(s) 533, 675, 681
TaqI TCGA 6 cut(s) 144, 344, 533, 666, 689, 869
TasI AATT 5 cut(s) 17, 486, 877, 901, 971
TatI WGTACW 1 cut(s) 602
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 3 cut(s) 93, 146, 686
TscAI CASTG 1 cut(s) 429
TseI GCWGC 2 cut(s) 288, 710
TspDTI ATGAA 4 cut(s) 17, 298, 611, 665
TspRI CASTG 1 cut(s) 429
Tth111I GACNNNGTC 1 cut(s) 398
VpaK11BI GGWCC 3 cut(s) 152, 222, 227
XapI RAATTY 4 cut(s) 17, 486, 877, 901
XspI CTAG 1 cut(s) 303
ZraI GACGTC 1 cut(s) 531
ZrmI AGTACT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.