FvH4_6g23640

Leucine-rich repeat receptor-like tyrosine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0010029
Physical Location & Seq
Reverse (-)
17711347 .. 17715311
3965 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g23640.t2

Sequence Viewer

Length: 2460 bp
ATGACATTTTTGTGGTTGTTGTTGCTTTTTCTAGCTGGGTTCTTGTCCAAGTCACAGTGTCAGCTTGTGGGTGGTGAGCTTCATGATCAGATTACATTGTTAGCCATTAGTGAAGAGCTTGGAGGACTGCCTGGGTGGGGTGGTGTGAACAACTCAGACTACTGTTCTTGGCCTGGCATTAGCTGCGGTTTGAACCATTCAATGGTGGAAAGACTTGACCTTTCTCATCATGAGCTTCGAGGACAAATACCAAATGAAATTCAGGGCCTACATAAGTTAGAGGATTTTCAAATATCTAGTACCAAGCTGAATGGTTCTATCCCACTTTGGGTGGGGAATTTGACCAATCTGAGAGTTTTTACTGCCTATGAGAATCAATTGGGGGGTGAAATTCCAGATAATCTAGGCTCAGCTTCTGACCTTGAATCTTTGAATCTACATTCCAACTGGCTAGAAGGCCCAATCCCTAAGAGCATTTTTGCTTCAGGGAAGCTGGAGTTTTTAGTTCTTACCCAAAACAGATTAAGTGGAGAAATTCCTCCAGAAATAGGAAGCTGCAGCAGCCTTTCTAGTATTCGAATCGGGAACAATGATCTTATAGGTAGCATTCCTCACACAATCGGGAATATTAGTGGCCTAACGTACTTTGAAGCAGACAACAACAATCTTTCTGGTGACATTGTTCCAGAATTTTCCAAGTGCTCAAATCTTACCCTTCTGAATTTAGCCTCAAATGGATTTACTGGAAGGATTCCTCCGGAGCTTGGACAGCTTATGAATCTGCAGGAGTTGATTCTCTCCAGTAACAGTCTGTTTGGAGATATTCCCAAATCAATTCTCGGGTGCAAGAATCTTAACAAGCTGGATCTCAGCAACAACAGAATCAATGGTACATTACCGAATGATATCTGTAACATGTCCAGGTTGCAATACTTGCTATTGAGCCAGAATTCGATAAGGGGGGAGATACCTCATGAGATTGGGAACTGTGTTAAACTGCTTGAGCTGCAAATGGGAAGAAACTATTTGACTGGCAATGTCCCTCCTGAAATTGGTCATATCAAAAACTTGCAGATAGCCTTAAATTTGAGCTTCAACCATCTCCATGGGCCTCTTCCCCCTGAATTAGGGAAACTTGACAAGCTTGTTTCTCTTGATGTCTCCAATAATCAGCTTTCGGATATTATTCCATCTGCGTTTAAGGGAATGCTGAGCTTGATAGAGGTTAATTTCTCAAACAATTTGTTCACTGGGCCAGTACCGACATTCATACCATTCCAGAAAAGTCCAAATTCAAGTTTTCTGGGAAATAAAGGGCTATGTGGTGAACCACTGAGCTCCTCATGTGGAAGTTCTTACAGTGCTGACCATGACAATTACCATCACAGGGTTTCTTACAGGATCATACTCGCAGTTATTGGTTCTAGTTTGACAATTTTTGTCTCAGTAACTGTAGTTGTTCTGCTGTTTATGATGCGAGAAAGACAGGAGAAGGAAGAGAAAGCTGCTGAGACTGAAGATGAAGGAGCCAACAACCTGCCGGTGATAGTGGCAGGGAATGTTTTCATTGAGAATCTCAGACAAGCAATTGATCTCGATTGTGCTGTTAAAGCAACTATGAAGGATTCAAACAAGGTCAGTACTGGGACTTTTAGCACTGTTTACAAGGCTGTAATGCCATCTGGGTTGATTGTATCAGTGAAGCGACTAAAATCCATGGATAGGACAATAGTTCATCACCAAAACAAGATGATTAGAGAGCTTGAAAGGCTGAGTAAACTCTGCCATGATAACCTTGTGCGCCCTATTGGATTTGTTATTTATGAAGATGTTGCTCTTTTGCTGCATCATTACTTGCCCTACGGGACATTGTGTCAGCTTCTTCATGAATCTTCCAAGAAACCTGAATATGAACCCGACTGGCCAACAAGACTTTCTATTGCCATTGGAGTAGCAGAAGGGTTGGCTTTTCTTCATAGTGTGGCAATTATCCACCTTGATATTTCTTCTGGCAATGTTCTTTTGGATGCTAACTCCAAGCCTCTAGTTGGAGAGATCGAGATCTCAAAGCTGTTGGATCCATCTAGAGGCACAGCCAGTATTAGTGCAGTTGCTGGCTCCTTTGGTTATATTCCTCCAGAATATGCATATACAATGCAAGTTACAGCTCCTGGAAATGTATATAGCTATGGCGTTATTTTGCTGGAGATCCTTACTACAAAATTGCCAGTAGATGAGGCCTTTGATGAAGGAGTAGATTTGGTGAAGTGGGTGCATAATGCTCCCATGAGAGGGGAAACCCCAGAGCAGATTCTCGACGCAAGGCTCAGCACGGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCAGCACTGAAGATTGCATTACTCTGTACTGACAGCATCCCAGCCAAACGGCCAAAAATGAAGAAGATTGTGGAAATGCTTCAAGAGATAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

820

Amino Acids

89.81

Weight (kDa)

5.67

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 133 - 219 2.6e-07 Leucine-rich repeat region
LRR_14 PF23598 297 - 466 9.8e-11 Leucine-rich repeat region
LRR_8 PF13855 331 - 390 4.5e-09 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 614 - 885 1.7e-27 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 614 - 820 6.8e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1545
AccB7I CCANNNNNTGG 1 cut(s) 202
AccIII TCCGGA 1 cut(s) 757
AciI CCGC 1 cut(s) 186
AclWI GGATC 5 cut(s) 873, 1409, 2072, 2085, 2203
AcoI YGGCCR 2 cut(s) 1922, 2414
AcsI RAATTY 9 cut(s) 258, 337, 390, 534, 689, 721, 949, 1084, 1291
AcuI CTGAAG 3 cut(s) 468, 1536, 2393
AfaI GTAC 6 cut(s) 301, 644, 892, 1260, 1642, 2392
AflIII ACRYGT 1 cut(s) 915
AhdI GACNNNNNGTC 1 cut(s) 1872
AjnI CCWGG 4 cut(s) 130, 172, 920, 2170
AjuI GAANNNNNNNTTGG 2 cut(s) 1918, 1950
Alw21I GWGCWC 2 cut(s) 704, 1340
Alw26I GTCTC 3 cut(s) 1165, 1447, 1505
AlwI GGATC 5 cut(s) 873, 1409, 2072, 2085, 2203
AlwNI CAGNNNCTG 4 cut(s) 416, 1451, 2114, 2171
Ama87I CYCGRG 1 cut(s) 839
Aor13HI TCCGGA 1 cut(s) 757
AoxI GGCC 9 cut(s) 170, 265, 457, 634, 1109, 1253, 1922, 2238, 2414
ApeKI GCWGC 8 cut(s) 183, 555, 558, 561, 1006, 1505, 1843, 2366
ApoI RAATTY 9 cut(s) 258, 337, 390, 534, 689, 721, 949, 1084, 1291
Asp700I GAANNNNTTC 2 cut(s) 1562, 2442
AspLEI GCGC 1 cut(s) 1803
AspS9I GGNCC 4 cut(s) 265, 458, 1109, 1253
AsuHPI GGTGA 7 cut(s) 86, 398, 686, 1337, 1555, 1730, 2275
AsuII TTCGAA 1 cut(s) 577
AvaI CYCGRG 1 cut(s) 839
BalI TGGCCA 1 cut(s) 1924
BamHI GGATCC 1 cut(s) 2077
BanII GRGCYC 1 cut(s) 1340
Bbv12I GWGCWC 2 cut(s) 704, 1340
BbvI GCAGC 8 cut(s) 170, 542, 570, 573, 993, 1492, 1830, 2378
BccI CCATC 5 cut(s) 1107, 1198, 1389, 1687, 2089
BceAI ACGGC 1 cut(s) 2429
BciT130I CCWGG 4 cut(s) 132, 174, 922, 2172
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 3 cut(s) 1165, 1447, 1505
BfaI CTAG 8 cut(s) 32, 297, 404, 452, 570, 1425, 2045, 2085
BfmI CTRYAG 3 cut(s) 556, 782, 1452
BfuAI ACCTGC 1 cut(s) 1545
BglII AGATCT 1 cut(s) 2061
BisI GCNGC 8 cut(s) 184, 556, 559, 562, 1007, 1506, 1844, 2367
BlpI GCTNAGC 3 cut(s) 409, 1211, 2327
BlsI GCNGC 8 cut(s) 185, 557, 560, 563, 1008, 1507, 1845, 2368
BmcAI AGTACT 1 cut(s) 1642
Bme1390I CCNGG 4 cut(s) 132, 174, 922, 2172
BmeRI GACNNNNNGTC 1 cut(s) 1872
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 4 cut(s) 265, 458, 1109, 1253
BmiI GGNNCC 3 cut(s) 1528, 2079, 2119
BmrFI CCNGG 4 cut(s) 132, 174, 922, 2172
BmrI ACTGGG 2 cut(s) 1260, 1653
BmsI GCATC 4 cut(s) 1464, 1855, 2017, 2409
BmuI ACTGGG 2 cut(s) 1260, 1653
BpmI CTGGAG 5 cut(s) 515, 525, 784, 2121, 2225
Bpu1102I GCTNAGC 3 cut(s) 409, 1211, 2327
Bpu14I TTCGAA 1 cut(s) 577
BpuEI CTTGAG 1 cut(s) 1022
BsaBI GATNNNNATC 1 cut(s) 2060
BsaJI CCNNGG 3 cut(s) 131, 1105, 1716
BsaWI WCCGGW 1 cut(s) 757
Bse118I RCCGGY 1 cut(s) 1540
Bse3DI GCAATG 2 cut(s) 1042, 2020
Bse8I GATNNNNATC 1 cut(s) 2060
BseAI TCCGGA 1 cut(s) 757
BseBI CCWGG 4 cut(s) 132, 174, 922, 2172
BseDI CCNNGG 3 cut(s) 131, 1105, 1716
BseGI GGATG 2 cut(s) 2032, 2400
BseJI GATNNNNATC 1 cut(s) 2060
BseMI GCAATG 2 cut(s) 1042, 2020
BseRI GAGGAG 1 cut(s) 1330
BseXI GCAGC 8 cut(s) 170, 542, 570, 573, 993, 1492, 1830, 2378
BseYI CCCAGC 2 cut(s) 35, 2404
BsgI GTGCAG 1 cut(s) 2127
BshFI GGCC 9 cut(s) 172, 267, 459, 636, 1111, 1255, 1924, 2240, 2416
BsiHKAI GWGCWC 2 cut(s) 704, 1340
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 2 cut(s) 758, 1541
BslFI GGGAC 3 cut(s) 1025, 1660, 1879
BsmAI GTCTC 3 cut(s) 1165, 1447, 1505
BsmFI GGGAC 3 cut(s) 1025, 1660, 1879
BsmI GAATGC 2 cut(s) 606, 1212
BsnI GGCC 9 cut(s) 172, 267, 459, 636, 1111, 1255, 1924, 2240, 2416
BsoBI CYCGRG 1 cut(s) 839
Bsp119I TTCGAA 1 cut(s) 577
Bsp1286I GDGCHC 2 cut(s) 704, 1340
Bsp13I TCCGGA 1 cut(s) 757
Bsp143I GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
Bsp1720I GCTNAGC 3 cut(s) 409, 1211, 2327
Bsp19I CCATGG 2 cut(s) 1105, 1716
BspACI CCGC 1 cut(s) 186
BspANI GGCC 9 cut(s) 172, 267, 459, 636, 1111, 1255, 1924, 2240, 2416
BspEI TCCGGA 1 cut(s) 757
BspHI TCATGA 4 cut(s) 82, 229, 973, 1885
BspLI GGNNCC 3 cut(s) 1528, 2079, 2119
BspMAI CTGCAG 2 cut(s) 560, 786
BspMI ACCTGC 1 cut(s) 1545
BspPI GGATC 5 cut(s) 873, 1409, 2072, 2085, 2203
BspQI GCTCTTC 1 cut(s) 108
BspT104I TTCGAA 1 cut(s) 577
BsrDI GCAATG 2 cut(s) 1042, 2020
BsrFI RCCGGY 1 cut(s) 1540
BssAI RCCGGY 1 cut(s) 1540
BssECI CCNNGG 3 cut(s) 131, 1105, 1716
BssMI GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
BssT1I CCWWGG 2 cut(s) 1105, 1716
Bst2UI CCWGG 4 cut(s) 132, 174, 922, 2172
Bst4CI ACNGT 8 cut(s) 57, 164, 809, 989, 1361, 1453, 1660, 2335
Bst6I CTCTTC 3 cut(s) 108, 1119, 1491
BstAPI GCANNNNNTGC 2 cut(s) 183, 934
BstBI TTCGAA 1 cut(s) 577
BstC8I GCNNGC 2 cut(s) 2116, 2364
BstDSI CCRYGG 2 cut(s) 1105, 1716
BstENI CCTNNNNNAGG 1 cut(s) 1125
BstF5I GGATG 2 cut(s) 2032, 2400
BstHHI GCGC 1 cut(s) 1803
BstKTI GATC 9 cut(s) 88, 595, 868, 1404, 1594, 2058, 2064, 2080, 2211
BstMAI GTCTC 3 cut(s) 1165, 1447, 1505
BstMBI GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
BstMWI GCNNNNNNNGC 7 cut(s) 183, 561, 769, 934, 1006, 1610, 1768
BstNI CCWGG 4 cut(s) 132, 174, 922, 2172
BstNSI RCATGY 1 cut(s) 919
BstSCI CCNGG 4 cut(s) 130, 172, 920, 2170
BstSFI CTRYAG 3 cut(s) 556, 782, 1452
BstV1I GCAGC 8 cut(s) 170, 542, 570, 573, 993, 1492, 1830, 2378
BstX2I RGATCY 4 cut(s) 865, 2061, 2077, 2208
BstXI CCANNNNNNTGG 1 cut(s) 1106
BstYI RGATCY 4 cut(s) 865, 2061, 2077, 2208
BsuRI GGCC 9 cut(s) 172, 267, 459, 636, 1111, 1255, 1924, 2240, 2416
BtgI CCRYGG 2 cut(s) 1105, 1716
BtsCI GGATG 2 cut(s) 2032, 2400
BtsIMutI CAGTG 7 cut(s) 62, 1248, 1331, 1366, 1656, 1704, 2369
BveI ACCTGC 1 cut(s) 1545
Cac8I GCNNGC 2 cut(s) 2116, 2364
CaiI CAGNNNCTG 4 cut(s) 416, 1451, 2114, 2171
CciI TCATGA 4 cut(s) 82, 229, 973, 1885
CfoI GCGC 1 cut(s) 1803
Cfr10I RCCGGY 1 cut(s) 1540
Cfr13I GGNCC 4 cut(s) 265, 458, 1109, 1253
CseI GACGC 1 cut(s) 2327
Csp6I GTAC 6 cut(s) 300, 643, 891, 1259, 1641, 2391
CviQI GTAC 6 cut(s) 300, 643, 891, 1259, 1641, 2391
DpnI GATC 9 cut(s) 87, 594, 867, 1403, 1593, 2057, 2063, 2079, 2210
DpnII GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
DriI GACNNNNNGTC 1 cut(s) 1872
EaeI YGGCCR 2 cut(s) 1922, 2414
Eam1104I CTCTTC 3 cut(s) 108, 1119, 1491
Eam1105I GACNNNNNGTC 1 cut(s) 1872
EarI CTCTTC 3 cut(s) 108, 1119, 1491
Ecl136II GAGCTC 1 cut(s) 1338
Eco130I CCWWGG 2 cut(s) 1105, 1716
Eco147I AGGCCT 1 cut(s) 2240
Eco24I GRGCYC 1 cut(s) 1340
Eco32I GATATC 1 cut(s) 907
Eco53kI GAGCTC 1 cut(s) 1338
Eco57I CTGAAG 3 cut(s) 468, 1536, 2393
Eco88I CYCGRG 1 cut(s) 839
EcoICRI GAGCTC 1 cut(s) 1338
EcoNI CCTNNNNNAGG 1 cut(s) 1125
EcoO109I RGGNCCY 1 cut(s) 265
EcoRI GAATTC 1 cut(s) 949
EcoRII CCWGG 4 cut(s) 130, 172, 920, 2170
EcoRV GATATC 1 cut(s) 907
EcoT14I CCWWGG 2 cut(s) 1105, 1716
EcoT22I ATGCAT 1 cut(s) 2149
EcoT38I GRGCYC 1 cut(s) 1340
ErhI CCWWGG 2 cut(s) 1105, 1716
FalI AAGNNNNNCTT 2 cut(s) 2346, 2378
FaqI GGGAC 3 cut(s) 1025, 1660, 1879
FbaI TGATCA 1 cut(s) 85
Fnu4HI GCNGC 8 cut(s) 184, 556, 559, 562, 1007, 1506, 1844, 2367
FokI GGATG 2 cut(s) 2039, 2387
FriOI GRGCYC 1 cut(s) 1340
Fsp4HI GCNGC 8 cut(s) 184, 556, 559, 562, 1007, 1506, 1844, 2367
FspBI CTAG 8 cut(s) 32, 297, 404, 452, 570, 1425, 2045, 2085
GlaI GCGC 1 cut(s) 1802
GluI GCNGC 8 cut(s) 184, 556, 559, 562, 1007, 1506, 1844, 2367
GsaI CCCAGC 2 cut(s) 39, 2408
GsuI CTGGAG 5 cut(s) 515, 525, 784, 2121, 2225
HaeIII GGCC 9 cut(s) 172, 267, 459, 636, 1111, 1255, 1924, 2240, 2416
HapII CCGG 2 cut(s) 758, 1541
HgaI GACGC 1 cut(s) 2327
HhaI GCGC 1 cut(s) 1803
Hin6I GCGC 1 cut(s) 1801
HinP1I GCGC 1 cut(s) 1801
HindIII AAGCTT 1 cut(s) 1142
HpaII CCGG 2 cut(s) 758, 1541
HphI GGTGA 7 cut(s) 86, 398, 686, 1337, 1555, 1730, 2275
Hpy166II GTNNAC 5 cut(s) 148, 1248, 1328, 1663, 1778
Hpy188I TCNGA 7 cut(s) 90, 157, 351, 418, 720, 1180, 1580
Hpy8I GTNNAC 5 cut(s) 148, 1248, 1328, 1663, 1778
Hpy99I CGWCG 1 cut(s) 2321
HpyAV CCTTC 8 cut(s) 449, 725, 741, 1486, 1517, 1615, 1952, 2243
HpyCH4III ACNGT 8 cut(s) 57, 164, 809, 989, 1361, 1453, 1660, 2335
HpyCH4IV ACGT 1 cut(s) 641
HpyF10VI GCNNNNNNNGC 7 cut(s) 183, 561, 769, 934, 1006, 1610, 1768
HpySE526I ACGT 1 cut(s) 641
HspAI GCGC 1 cut(s) 1801
Kpn2I TCCGGA 1 cut(s) 757
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 6 cut(s) 760, 1343, 1526, 2123, 2173, 2287
Lsp1109I GCAGC 8 cut(s) 170, 542, 570, 573, 993, 1492, 1830, 2378
LweI GCATC 4 cut(s) 1464, 1855, 2017, 2409
MaeI CTAG 8 cut(s) 32, 297, 404, 452, 570, 1425, 2045, 2085
MaeII ACGT 1 cut(s) 641
MaeIII GTNAC 6 cut(s) 51, 674, 803, 911, 1447, 2161
MalI GATC 9 cut(s) 87, 594, 867, 1403, 1593, 2057, 2063, 2079, 2210
MboI GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
MfeI CAATTG 2 cut(s) 377, 1587
MflI RGATCY 4 cut(s) 865, 2061, 2077, 2208
MhlI GDGCHC 2 cut(s) 704, 1340
MlsI TGGCCA 1 cut(s) 1924
MluNI TGGCCA 1 cut(s) 1924
MmeI TCCRAC 4 cut(s) 468, 2029, 2055, 2327
Mox20I TGGCCA 1 cut(s) 1924
Mph1103I ATGCAT 1 cut(s) 2149
MroI TCCGGA 1 cut(s) 757
MroXI GAANNNNTTC 2 cut(s) 1562, 2442
MscI TGGCCA 1 cut(s) 1924
MseI TTAA 7 cut(s) 524, 855, 993, 1082, 1200, 1227, 1608
MslI CAYNNNNRTG 2 cut(s) 10, 1104
Msp20I TGGCCA 1 cut(s) 1924
MspI CCGG 2 cut(s) 758, 1541
MspR9I CCNGG 4 cut(s) 132, 174, 922, 2172
MunI CAATTG 2 cut(s) 377, 1587
Mva1269I GAATGC 2 cut(s) 606, 1212
MvaI CCWGG 4 cut(s) 132, 174, 922, 2172
MwoI GCNNNNNNNGC 7 cut(s) 183, 561, 769, 934, 1006, 1610, 1768
NcoI CCATGG 2 cut(s) 1105, 1716
NdeII GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
NlaIV GGNNCC 3 cut(s) 1528, 2079, 2119
NmuCI GTSAC 2 cut(s) 51, 674
NsiI ATGCAT 1 cut(s) 2149
NspI RCATGY 1 cut(s) 919
NspV TTCGAA 1 cut(s) 577
PagI TCATGA 4 cut(s) 82, 229, 973, 1885
PceI AGGCCT 1 cut(s) 2240
PciI ACATGT 1 cut(s) 915
PciSI GCTCTTC 1 cut(s) 108
PctI GAATGC 2 cut(s) 606, 1212
PdmI GAANNNNTTC 2 cut(s) 1562, 2442
PflMI CCANNNNNTGG 1 cut(s) 202
PfoI TCCNGGA 1 cut(s) 2170
PkrI GCNGC 8 cut(s) 185, 557, 560, 563, 1008, 1507, 1845, 2368
PscI ACATGT 1 cut(s) 915
Psp124BI GAGCTC 1 cut(s) 1340
Psp6I CCWGG 4 cut(s) 130, 172, 920, 2170
PspFI CCCAGC 2 cut(s) 35, 2404
PspGI CCWGG 4 cut(s) 130, 172, 920, 2170
PspN4I GGNNCC 3 cut(s) 1528, 2079, 2119
PspPI GGNCC 4 cut(s) 265, 458, 1109, 1253
PstI CTGCAG 2 cut(s) 560, 786
PstNI CAGNNNCTG 4 cut(s) 416, 1451, 2114, 2171
PsuI RGATCY 4 cut(s) 865, 2061, 2077, 2208
RsaI GTAC 6 cut(s) 301, 644, 892, 1260, 1642, 2392
RsaNI GTAC 6 cut(s) 300, 643, 891, 1259, 1641, 2391
RseI CAYNNNNRTG 2 cut(s) 10, 1104
SacI GAGCTC 1 cut(s) 1340
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 7 cut(s) 524, 855, 993, 1082, 1200, 1227, 1608
SatI GCNGC 8 cut(s) 184, 556, 559, 562, 1007, 1506, 1844, 2367
Sau3AI GATC 9 cut(s) 85, 592, 865, 1401, 1591, 2055, 2061, 2077, 2208
Sau96I GGNCC 4 cut(s) 265, 458, 1109, 1253
ScaI AGTACT 1 cut(s) 1642
ScrFI CCNGG 4 cut(s) 132, 174, 922, 2172
SduI GDGCHC 2 cut(s) 704, 1340
SfaNI GCATC 4 cut(s) 1464, 1855, 2017, 2409
SfcI CTRYAG 3 cut(s) 556, 782, 1452
SfuI TTCGAA 1 cut(s) 577
SmiMI CAYNNNNRTG 2 cut(s) 10, 1104
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
SseBI AGGCCT 1 cut(s) 2240
SsiI CCGC 1 cut(s) 186
SspI AATATT 1 cut(s) 628
SspMI CTAG 8 cut(s) 32, 297, 404, 452, 570, 1425, 2045, 2085
SstI GAGCTC 1 cut(s) 1340
StuI AGGCCT 1 cut(s) 2240
StyD4I CCNGG 4 cut(s) 130, 172, 920, 2170
StyI CCWWGG 2 cut(s) 1105, 1716
TaaI ACNGT 8 cut(s) 57, 164, 809, 989, 1361, 1453, 1660, 2335
TaiI ACGT 1 cut(s) 644
TaqI TCGA 6 cut(s) 238, 577, 953, 1596, 2058, 2316
TatI WGTACW 2 cut(s) 1640, 2390
Tru1I TTAA 7 cut(s) 524, 855, 993, 1082, 1200, 1227, 1608
Tru9I TTAA 7 cut(s) 524, 855, 993, 1082, 1200, 1227, 1608
TscAI CASTG 7 cut(s) 62, 1255, 1338, 1366, 1663, 1704, 2376
TseFI GTSAC 2 cut(s) 51, 674
TseI GCWGC 8 cut(s) 183, 555, 558, 561, 1006, 1505, 1843, 2366
Tsp45I GTSAC 2 cut(s) 51, 674
TspRI CASTG 7 cut(s) 62, 1255, 1338, 1366, 1663, 1704, 2376
Van91I CCANNNNNTGG 1 cut(s) 202
XagI CCTNNNNNAGG 1 cut(s) 1125
XapI RAATTY 9 cut(s) 258, 337, 390, 534, 689, 721, 949, 1084, 1291
XbaI TCTAGA 1 cut(s) 2084
XceI RCATGY 1 cut(s) 919
XmnI GAANNNNTTC 2 cut(s) 1562, 2442
XspI CTAG 8 cut(s) 32, 297, 404, 452, 570, 1425, 2045, 2085
ZrmI AGTACT 1 cut(s) 1642
Zsp2I ATGCAT 1 cut(s) 2149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.