FvH4_6g26430
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0015660
Physical Location & Seq
Reverse (-)
20220713 .. 20222864
2152 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g26430.t1

Sequence Viewer

Length: 1044 bp
ATGCTGTCTAGAGCCTTGACTGTAACCAGAAAGAGCCCTAAGGATGATGTCTACATACGCGATCTCGCCTGCAGCCAATCGGGCAGCTCCTTCAATGACTACGAGGACTGCATCGTCGGCTTCATGGAGGATTTGCCACTCGTCCCCTGCGACCACGACAAGAAGTGTGTCGGATGTGGGGAGAGCCTGGCACACTTAACCTTGAGGGGTGTGCTTAGAGGTTCGGTGGGTGTGATCGGAGAGAGCCGGTTGGCAATGACGGAGAAGGTGGTGCTCTTGGGAGGAAGAGTGTGTGCGGTCAAGAGGTTTAGGCAGCTGAGTATTAAAAGACGCGAGTTTGGCAAGAGAATTGAGAGGTTGGCTGAGGTGAGTAGGAAGTGTGATTTTCTTGTTCCAGTCACTGCTTATTTGTTTGCCAAGAGGATCAAGTTTGTGCTCTCCGATTATCGCCCCATGGGAAGCCTCGCTGACTTGCTTGCTGGTGCGAGGGATCATGGTCACACGGCGCTGGTTTGGAACCAAAGGCTGGCCATAATTTGCGATATTGTAAAAGCAATATCCTATGTCCACAAACAACCTCCATACCAGAAGAACATGATAATGAACATCCATGGCAGCGTCAAGGCCTCAAACGTGTTAGTGAACATCGATTTCTCAGCATGCTTATCGGATTACGGGTTCACCCAGTTGGCGGAGCAAGTGGAGATTCCGGAAGGGCAGGTGATGAAGTCGCCCCGGTGGCTGGTGGAGAAGACCAACTATTCGAATGAGTTGTCGCAGAGGGCTGACATTTACAACTTTGGGGTGATACTGCTGGACATTTTAGCAGGGCCAAAGGGTCTGAGTCTGCTGAGAATGGGAATGAATGAGAAGAAGGAAGCCATGAGATGTGGTGTTTTGGATTTGGTTGAGTTTGGTGTGAAGGATGGGAAAGAACAGAGGCAAGTATCGAAGCTCTTCGGCATGGCCTTGACATGTACAAATGCCAACCCGGAGGTTAGGAAAACAATAGATGAGGTTAATTTTGAAATCTCGAGGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

348

Amino Acids

38.83

Weight (kDa)

8.96

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 88 - 340 5.3e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 97 - 341 2.2e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015660)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26430
malus_domestica MD06G1104800.v1.1 MD14G1123700.v1.1
prunus_persica Prupe.5G117400_v2.0.a1
pyrus_communis pycom06g09930
rosa_chinensis RchiOBHm_Chr7g0195111
rosa_laevigata RLG00000004145
rosa_multiflora Rmu_co8510033.1_g000001 Rmu_sc0002381.1_g000031
rosa_roxburghii Rroxscaffold_3G00260770
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148200 Rh7BG149000 Rh7CG152400 Rh7DG149300
rosa_wichuraiana Rw7G012650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 709
AasI GACNNNNNNGTC 1 cut(s) 113
Acc36I ACCTGC 1 cut(s) 709
AccB7I CCANNNNNTGG 1 cut(s) 526
AccI GTMKAC 1 cut(s) 51
AccII CGCG 2 cut(s) 60, 333
AccIII TCCGGA 1 cut(s) 709
AciI CCGC 2 cut(s) 296, 692
AclWI GGATC 2 cut(s) 431, 498
AcoI YGGCCR 1 cut(s) 528
AfaI GTAC 1 cut(s) 979
AfiI CCNNNNNNNGG 3 cut(s) 526, 691, 742
AflIII ACRYGT 2 cut(s) 633, 974
AgsI TTSAA 2 cut(s) 94, 1028
AjnI CCWGG 1 cut(s) 186
AloI GAACNNNNNNTCC 2 cut(s) 662, 694
AluBI AGCT 3 cut(s) 87, 316, 955
AluI AGCT 3 cut(s) 87, 316, 955
Alw21I GWGCWC 2 cut(s) 276, 438
AlwI GGATC 2 cut(s) 431, 498
AlwNI CAGNNNCTG 1 cut(s) 401
Ama87I CYCGRG 1 cut(s) 1033
Aor13HI TCCGGA 1 cut(s) 709
AoxI GGCC 4 cut(s) 528, 624, 830, 966
ApeKI GCWGC 4 cut(s) 72, 84, 313, 615
ArsI GACNNNNNNTTYG 4 cut(s) 745, 758, 777, 790
Asp700I GAANNNNTTC 1 cut(s) 956
AspLEI GCGC 1 cut(s) 508
AspS9I GGNCC 1 cut(s) 830
AsuC2I CCSGG 2 cut(s) 736, 992
AsuHPI GGTGA 4 cut(s) 379, 673, 733, 817
AsuII TTCGAA 1 cut(s) 764
AvaI CYCGRG 1 cut(s) 1033
AxyI CCTNAGG 1 cut(s) 39
BalI TGGCCA 1 cut(s) 530
BanII GRGCYC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 758
Bbv12I GWGCWC 2 cut(s) 276, 438
BbvCI CCTCAGC 1 cut(s) 363
BbvI GCAGC 4 cut(s) 84, 96, 325, 627
BccI CCATC 1 cut(s) 920
BceAI ACGGC 1 cut(s) 519
BcgI CGANNNNNNTGC 2 cut(s) 648, 682
BciT130I CCWGG 1 cut(s) 188
BcnI CCSGG 2 cut(s) 736, 992
BfaI CTAG 1 cut(s) 9
BfmI CTRYAG 1 cut(s) 70
BfoI RGCGCY 1 cut(s) 509
BfuAI ACCTGC 1 cut(s) 709
BglI GCCNNNNNGGC 2 cut(s) 81, 739
BisI GCNGC 4 cut(s) 73, 85, 314, 616
BlsI GCNGC 4 cut(s) 74, 86, 315, 617
Bme1390I CCNGG 3 cut(s) 188, 736, 992
BmeT110I CYCGRG 1 cut(s) 1033
BmgT120I GGNCC 1 cut(s) 830
BmiI GGNNCC 1 cut(s) 518
BmrFI CCNGG 3 cut(s) 188, 736, 992
BmrI ACTGGG 1 cut(s) 679
BmsI GCATC 1 cut(s) 120
BmuI ACTGGG 1 cut(s) 679
BpiI GAAGAC 1 cut(s) 758
Bpu10I CCTNAGC 1 cut(s) 363
Bpu14I TTCGAA 1 cut(s) 764
BpuEI CTTGAG 1 cut(s) 223
BpuMI CCSGG 2 cut(s) 736, 992
Bsa29I ATCGAT 1 cut(s) 648
BsaJI CCNNGG 3 cut(s) 453, 610, 734
BsaWI WCCGGW 1 cut(s) 709
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 526, 691, 742
Bse118I RCCGGY 1 cut(s) 246
Bse1I ACTGG 2 cut(s) 395, 685
Bse21I CCTNAGG 1 cut(s) 39
Bse3DI GCAATG 1 cut(s) 261
BseAI TCCGGA 1 cut(s) 709
BseBI CCWGG 1 cut(s) 188
BseCI ATCGAT 1 cut(s) 648
BseDI CCNNGG 3 cut(s) 453, 610, 734
BseGI GGATG 5 cut(s) 49, 179, 606, 931, 1044
BseLI CCNNNNNNNGG 3 cut(s) 526, 691, 742
BseMI GCAATG 1 cut(s) 261
BseMII CTCAG 5 cut(s) 308, 354, 669, 833, 842
BseNI ACTGG 2 cut(s) 395, 685
BseXI GCAGC 4 cut(s) 84, 96, 325, 627
Bsh1236I CGCG 2 cut(s) 60, 333
BshFI GGCC 4 cut(s) 530, 626, 832, 968
BshVI ATCGAT 1 cut(s) 648
BsiHKAI GWGCWC 2 cut(s) 276, 438
BsiHKCI CYCGRG 1 cut(s) 1033
BsiSI CCGG 4 cut(s) 247, 710, 736, 992
BslFI GGGAC 1 cut(s) 128
BslI CCNNNNNNNGG 3 cut(s) 526, 691, 742
BsmFI GGGAC 1 cut(s) 128
BsnI GGCC 4 cut(s) 530, 626, 832, 968
BsoBI CYCGRG 1 cut(s) 1033
Bsp119I TTCGAA 1 cut(s) 764
Bsp1286I GDGCHC 3 cut(s) 38, 276, 438
Bsp13I TCCGGA 1 cut(s) 709
Bsp1407I TGTACA 1 cut(s) 977
Bsp143I GATC 4 cut(s) 61, 234, 423, 490
Bsp19I CCATGG 2 cut(s) 453, 610
BspACI CCGC 2 cut(s) 296, 692
BspANI GGCC 4 cut(s) 530, 626, 832, 968
BspCNI CTCAG 5 cut(s) 309, 355, 668, 834, 843
BspDI ATCGAT 1 cut(s) 648
BspEI TCCGGA 1 cut(s) 709
BspFNI CGCG 2 cut(s) 60, 333
BspLI GGNNCC 1 cut(s) 518
BspMAI CTGCAG 1 cut(s) 74
BspMI ACCTGC 1 cut(s) 709
BspPI GGATC 2 cut(s) 431, 498
BspQI GCTCTTC 1 cut(s) 962
BspT104I TTCGAA 1 cut(s) 764
BsrDI GCAATG 1 cut(s) 261
BsrFI RCCGGY 1 cut(s) 246
BsrGI TGTACA 1 cut(s) 977
BsrI ACTGG 2 cut(s) 395, 685
BssAI RCCGGY 1 cut(s) 246
BssECI CCNNGG 3 cut(s) 453, 610, 734
BssMI GATC 4 cut(s) 61, 234, 423, 490
BssT1I CCWWGG 2 cut(s) 453, 610
Bst2UI CCWGG 1 cut(s) 188
Bst4CI ACNGT 1 cut(s) 22
Bst6I CTCTTC 2 cut(s) 280, 962
BstAUI TGTACA 1 cut(s) 977
BstBI TTCGAA 1 cut(s) 764
BstC8I GCNNGC 4 cut(s) 70, 477, 528, 661
BstDEI CTNAG 7 cut(s) 39, 215, 317, 363, 655, 842, 851
BstDSI CCRYGG 2 cut(s) 453, 610
BstF5I GGATG 5 cut(s) 49, 179, 606, 931, 1044
BstFNI CGCG 2 cut(s) 60, 333
BstH2I RGCGCY 1 cut(s) 509
BstHHI GCGC 1 cut(s) 508
BstKTI GATC 4 cut(s) 64, 237, 426, 493
BstMBI GATC 4 cut(s) 61, 234, 423, 490
BstMWI GCNNNNNNNGC 4 cut(s) 81, 117, 339, 739
BstNI CCWGG 1 cut(s) 188
BstNSI RCATGY 2 cut(s) 663, 978
BstSCI CCNGG 3 cut(s) 186, 734, 990
BstSFI CTRYAG 1 cut(s) 70
BstUI CGCG 2 cut(s) 60, 333
BstV1I GCAGC 4 cut(s) 84, 96, 325, 627
BstV2I GAAGAC 1 cut(s) 758
Bsu15I ATCGAT 1 cut(s) 648
Bsu36I CCTNAGG 1 cut(s) 39
BsuRI GGCC 4 cut(s) 530, 626, 832, 968
BsuTUI ATCGAT 1 cut(s) 648
BtgI CCRYGG 2 cut(s) 453, 610
BtsCI GGATG 5 cut(s) 49, 179, 606, 931, 1044
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 1 cut(s) 399
BveI ACCTGC 1 cut(s) 709
Cac8I GCNNGC 4 cut(s) 70, 477, 528, 661
CaiI CAGNNNCTG 1 cut(s) 401
CfoI GCGC 1 cut(s) 508
Cfr10I RCCGGY 1 cut(s) 246
Cfr13I GGNCC 1 cut(s) 830
ClaI ATCGAT 1 cut(s) 648
CseI GACGC 2 cut(s) 339, 607
Csp6I GTAC 1 cut(s) 978
CviAII CATG 9 cut(s) 124, 454, 494, 595, 611, 660, 883, 964, 975
CviQI GTAC 1 cut(s) 978
DdeI CTNAG 7 cut(s) 39, 215, 317, 363, 655, 842, 851
DpnI GATC 4 cut(s) 63, 236, 425, 492
DpnII GATC 4 cut(s) 61, 234, 423, 490
DrdI GACNNNNNNGTC 1 cut(s) 113
DseDI GACNNNNNNGTC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 528
Eam1104I CTCTTC 2 cut(s) 280, 962
EarI CTCTTC 2 cut(s) 280, 962
EciI GGCGGA 1 cut(s) 707
Eco130I CCWWGG 2 cut(s) 453, 610
Eco147I AGGCCT 1 cut(s) 626
Eco24I GRGCYC 1 cut(s) 38
Eco81I CCTNAGG 1 cut(s) 39
Eco88I CYCGRG 1 cut(s) 1033
EcoRII CCWGG 1 cut(s) 186
EcoT14I CCWWGG 2 cut(s) 453, 610
EcoT38I GRGCYC 1 cut(s) 38
ErhI CCWWGG 2 cut(s) 453, 610
FaeI CATG 9 cut(s) 127, 457, 497, 598, 614, 663, 886, 967, 978
FaqI GGGAC 1 cut(s) 128
FatI CATG 9 cut(s) 123, 453, 493, 594, 610, 659, 882, 963, 974
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 4 cut(s) 73, 85, 314, 616
FokI GGATG 4 cut(s) 56, 186, 593, 938
FriOI GRGCYC 1 cut(s) 38
Fsp4HI GCNGC 4 cut(s) 73, 85, 314, 616
FspBI CTAG 1 cut(s) 9
GlaI GCGC 1 cut(s) 507
GluI GCNGC 4 cut(s) 73, 85, 314, 616
HaeII RGCGCY 1 cut(s) 509
HaeIII GGCC 4 cut(s) 530, 626, 832, 968
HapII CCGG 4 cut(s) 247, 710, 736, 992
HgaI GACGC 2 cut(s) 339, 607
HhaI GCGC 1 cut(s) 508
Hin1II CATG 9 cut(s) 127, 457, 497, 598, 614, 663, 886, 967, 978
Hin6I GCGC 1 cut(s) 506
HinP1I GCGC 1 cut(s) 506
HinfI GANTC 2 cut(s) 706, 844
HpaII CCGG 4 cut(s) 247, 710, 736, 992
HphI GGTGA 4 cut(s) 379, 673, 733, 817
Hpy166II GTNNAC 4 cut(s) 52, 568, 643, 681
Hpy188I TCNGA 5 cut(s) 173, 239, 442, 670, 843
Hpy188III TCNNGA 4 cut(s) 9, 301, 710, 1033
Hpy8I GTNNAC 4 cut(s) 52, 568, 643, 681
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 5 cut(s) 100, 259, 707, 868, 916
HpyCH4III ACNGT 1 cut(s) 22
HpyCH4IV ACGT 1 cut(s) 633
HpyCH4V TGCA 2 cut(s) 72, 111
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 117, 339, 739
HpyF3I CTNAG 7 cut(s) 39, 215, 317, 363, 655, 842, 851
HpySE526I ACGT 1 cut(s) 633
Hsp92II CATG 9 cut(s) 127, 457, 497, 598, 614, 663, 886, 967, 978
HspAI GCGC 1 cut(s) 506
Kpn2I TCCGGA 1 cut(s) 709
Kzo9I GATC 4 cut(s) 61, 234, 423, 490
LguI GCTCTTC 1 cut(s) 962
LmnI GCTCC 2 cut(s) 92, 694
Lsp1109I GCAGC 4 cut(s) 84, 96, 325, 627
LweI GCATC 1 cut(s) 120
MaeI CTAG 1 cut(s) 9
MaeII ACGT 1 cut(s) 633
MaeIII GTNAC 3 cut(s) 22, 397, 497
MalI GATC 4 cut(s) 63, 236, 425, 492
MboI GATC 4 cut(s) 61, 234, 423, 490
MboII GAAGA 5 cut(s) 297, 601, 763, 883, 949
MhlI GDGCHC 3 cut(s) 38, 276, 438
MlsI TGGCCA 1 cut(s) 530
MluCI AATT 3 cut(s) 348, 534, 1021
MluNI TGGCCA 1 cut(s) 530
MlyI GAGTC 1 cut(s) 853
MmeI TCCRAC 1 cut(s) 151
Mox20I TGGCCA 1 cut(s) 530
MroI TCCGGA 1 cut(s) 709
MroXI GAANNNNTTC 1 cut(s) 956
MscI TGGCCA 1 cut(s) 530
MseI TTAA 3 cut(s) 197, 324, 1020
MslI CAYNNNNRTG 1 cut(s) 599
Msp20I TGGCCA 1 cut(s) 530
MspA1I CMGCKG 1 cut(s) 316
MspI CCGG 4 cut(s) 247, 710, 736, 992
MspR9I CCNGG 3 cut(s) 188, 736, 992
MvaI CCWGG 1 cut(s) 188
MvnI CGCG 2 cut(s) 60, 333
MwoI GCNNNNNNNGC 4 cut(s) 81, 117, 339, 739
NciI CCSGG 2 cut(s) 736, 992
NcoI CCATGG 2 cut(s) 453, 610
NdeII GATC 4 cut(s) 61, 234, 423, 490
NlaIII CATG 9 cut(s) 127, 457, 497, 598, 614, 663, 886, 967, 978
NlaIV GGNNCC 1 cut(s) 518
NmuCI GTSAC 2 cut(s) 397, 497
NspI RCATGY 2 cut(s) 663, 978
NspV TTCGAA 1 cut(s) 764
PaeI GCATGC 1 cut(s) 663
PaeR7I CTCGAG 1 cut(s) 1033
PaqCI CACCTGC 1 cut(s) 709
PceI AGGCCT 1 cut(s) 626
PciI ACATGT 1 cut(s) 974
PciSI GCTCTTC 1 cut(s) 962
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 1 cut(s) 706
PflMI CCANNNNNTGG 1 cut(s) 526
PkrI GCNGC 4 cut(s) 74, 86, 315, 617
PleI GAGTC 1 cut(s) 852
PpsI GAGTC 1 cut(s) 852
PscI ACATGT 1 cut(s) 974
Psp6I CCWGG 1 cut(s) 186
PspGI CCWGG 1 cut(s) 186
PspN4I GGNNCC 1 cut(s) 518
PspPI GGNCC 1 cut(s) 830
PstI CTGCAG 1 cut(s) 74
PstNI CAGNNNCTG 1 cut(s) 401
PvuII CAGCTG 1 cut(s) 316
RsaI GTAC 1 cut(s) 979
RsaNI GTAC 1 cut(s) 978
RseI CAYNNNNRTG 1 cut(s) 599
SapI GCTCTTC 1 cut(s) 962
SaqAI TTAA 3 cut(s) 197, 324, 1020
SatI GCNGC 4 cut(s) 73, 85, 314, 616
Sau3AI GATC 4 cut(s) 61, 234, 423, 490
Sau96I GGNCC 1 cut(s) 830
SchI GAGTC 1 cut(s) 853
ScrFI CCNGG 3 cut(s) 188, 736, 992
SduI GDGCHC 3 cut(s) 38, 276, 438
SfaNI GCATC 1 cut(s) 120
SfcI CTRYAG 1 cut(s) 70
Sfr274I CTCGAG 1 cut(s) 1033
SfuI TTCGAA 1 cut(s) 764
SlaI CTCGAG 1 cut(s) 1033
SmiMI CAYNNNNRTG 1 cut(s) 599
SmlI CTYRAG 2 cut(s) 202, 1033
SmoI CTYRAG 2 cut(s) 202, 1033
SphI GCATGC 1 cut(s) 663
Sse9I AATT 3 cut(s) 348, 534, 1021
SseBI AGGCCT 1 cut(s) 626
SsiI CCGC 2 cut(s) 296, 692
SspMI CTAG 1 cut(s) 9
StuI AGGCCT 1 cut(s) 626
StyD4I CCNGG 3 cut(s) 186, 734, 990
StyI CCWWGG 2 cut(s) 453, 610
TaaI ACNGT 1 cut(s) 22
TaiI ACGT 1 cut(s) 636
TaqI TCGA 4 cut(s) 648, 764, 950, 1034
TasI AATT 3 cut(s) 348, 534, 1021
TatI WGTACW 1 cut(s) 977
TfiI GAWTC 1 cut(s) 706
Tru1I TTAA 3 cut(s) 197, 324, 1020
Tru9I TTAA 3 cut(s) 197, 324, 1020
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 2 cut(s) 397, 497
TseI GCWGC 4 cut(s) 72, 84, 313, 615
Tsp45I GTSAC 2 cut(s) 397, 497
TspDTI ATGAA 4 cut(s) 112, 617, 740, 878
TspGWI ACGGA 1 cut(s) 275
TspRI CASTG 1 cut(s) 406
Van91I CCANNNNNTGG 1 cut(s) 526
XbaI TCTAGA 1 cut(s) 8
XceI RCATGY 2 cut(s) 663, 978
XhoI CTCGAG 1 cut(s) 1033
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.