pycom06g09930
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0015660
Physical Location & Seq
Forward (+)
15246972 .. 15249034
2063 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g09930.3

Sequence Viewer

Length: 1191 bp
ATGCTGGTTTGGGTGGCAAACAGCAAGGTTAGCTGGACTGATACAACCAAGAAACATGACAATAAATTAAAATCACCCAAACAAGGAAACCACCACCATCCACACACCATTCTCCACCAAACATCACATTCACATTTACATTCCTCTCTGAAGAAAAACATGTTAACCCTAACAGAAAAACCCAGAAGAAGCCCCAAAAACGAACCCCTAAACAGCTGCGCCAGCTCCTTCGCCGACTATGAAGACTGCATCGTTGGCTTCATGGACGACCTTCAACTTGTCCACTGCGGCCACGACAAGAAGTGTTTGGGGTGCGGAGAAGAGCTAGCCCACCTGACACTAAGAGGTGTGCTGAGGGGTTCAGTGGGTGTGATCGGAGAGAGCAGGCTGGCGATGACTGAGAAGGTGGTGCTGTTGGGAGGTAGGGTTTGTGCTGTGAAAAGGTTTAGGCAAGTGAGCTCCGGAAGGCGTGAGTTTGGGAAGAAAATCGAGCACTTGGCTAGGGTGAGTCAGAAGTGCGAGTATCTTTTGCCTGTCGCTGCATATTTGTATGCTAAGAGGATAAAGTTTGTTCTCTGCGATTATAAACCCATGGGAAGCCTCGCCGACTTGCTCGCCGGTGCTAGGCAGCATGGCCACACAGCATTGGACTGGAACCAAAGGCTCACCATAATTGTTCAAATTGCACGAGGAATTGGATTCATCCACGAACAATACCCTCCATATGAGAAGAAGATGCAGATGAACGTGCATGGGAACATTAGGGTTTGTAATGTCATGGTGAATACCAACTTCTCAGCCTGCTTGTCTGGTTACGGATTCAACCAATTGGCAGAGCCAGTCGAAGTTCTCAACACAGGGCAGCTGATGAAGTCGCCCTGCTGGCAGCAAGAAAATACCACCTACTCTGATGAACTGAGTCAGAAGAGTGACATTTATAATTTTGGGGTTATACTGCTGGACATATTGGCAGGACCAAAGGGTTTGGAAATGACAAAGGGCGTAAAAGAAAAGAAGGCAAGCATGAAATTAGAAGGTGGTTTGGAGTTCTTTGAGTTTTATGTGAAGGAAGGCAAAGAGAGGAGGCAAGTGTCAAAGGTTTTGGAAATTGCTTTGGCATGTATAAGTACCAAACCAGACGCTAGGCCTTTAATAGAAGAGATTAATTATACTATCGTGGAGATATTGTAA

Protein Analysis

397

Amino Acids

44.58

Weight (kDa)

9.05

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015660)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26430
malus_domestica MD06G1104800.v1.1 MD14G1123700.v1.1
prunus_persica Prupe.5G117400_v2.0.a1
pyrus_communis pycom06g09930
rosa_chinensis RchiOBHm_Chr7g0195111
rosa_laevigata RLG00000004145
rosa_multiflora Rmu_co8510033.1_g000001 Rmu_sc0002381.1_g000031
rosa_roxburghii Rroxscaffold_3G00260770
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148200 Rh7BG149000 Rh7CG152400 Rh7DG149300
rosa_wichuraiana Rw7G012650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 585, 939
AccIII TCCGGA 1 cut(s) 461
AciI CCGC 2 cut(s) 288, 315
AcoI YGGCCR 2 cut(s) 289, 634
AcuI CTGAAG 1 cut(s) 170
AfaI GTAC 1 cut(s) 1129
AfiI CCNNNNNNNGG 2 cut(s) 83, 624
AflIII ACRYGT 1 cut(s) 159
AgsI TTSAA 3 cut(s) 275, 680, 823
AluBI AGCT 6 cut(s) 33, 216, 225, 325, 459, 865
AluI AGCT 6 cut(s) 33, 216, 225, 325, 459, 865
Alw21I GWGCWC 2 cut(s) 461, 495
Aor13HI TCCGGA 1 cut(s) 461
AoxI GGCC 3 cut(s) 289, 634, 1145
ApeKI GCWGC 5 cut(s) 216, 539, 628, 862, 886
AseI ATTAAT 1 cut(s) 1164
AspLEI GCGC 1 cut(s) 221
AspS9I GGNCC 1 cut(s) 974
AsuHPI GGTGA 4 cut(s) 66, 517, 658, 793
AsuNHI GCTAGC 1 cut(s) 325
AvaII GGWCC 1 cut(s) 974
BalI TGGCCA 1 cut(s) 636
BanII GRGCYC 1 cut(s) 461
BauI CACGAG 1 cut(s) 687
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 2 cut(s) 461, 495
BbvCI CCTCAGC 1 cut(s) 353
BbvI GCAGC 5 cut(s) 203, 526, 640, 874, 898
BccI CCATC 1 cut(s) 105
BfaI CTAG 4 cut(s) 326, 501, 624, 1143
BglI GCCNNNNNGGC 1 cut(s) 883
BisI GCNGC 6 cut(s) 217, 289, 540, 629, 863, 887
BlsI GCNGC 6 cut(s) 218, 290, 541, 630, 864, 888
Bme18I GGWCC 1 cut(s) 974
BmgT120I GGNCC 1 cut(s) 974
BmiI GGNNCC 1 cut(s) 656
BmsI GCATC 2 cut(s) 258, 726
BmtI GCTAGC 1 cut(s) 329
BpiI GAAGAC 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 353
BsaJI CCNNGG 1 cut(s) 591
BsaWI WCCGGW 1 cut(s) 461
BsaXI ACNNNNNCTCC 3 cut(s) 411, 441, 1172
Bsc4I CCNNNNNNNGG 2 cut(s) 83, 624
Bse118I RCCGGY 1 cut(s) 617
Bse1I ACTGG 2 cut(s) 656, 839
BseAI TCCGGA 1 cut(s) 461
BseDI CCNNGG 1 cut(s) 591
BseGI GGATG 2 cut(s) 97, 702
BseLI CCNNNNNNNGG 2 cut(s) 83, 624
BseMII CTCAG 4 cut(s) 344, 390, 810, 908
BseNI ACTGG 2 cut(s) 656, 839
BseRI GAGGAG 1 cut(s) 1096
BseXI GCAGC 5 cut(s) 203, 526, 640, 874, 898
BshFI GGCC 3 cut(s) 291, 636, 1147
BsiHKAI GWGCWC 2 cut(s) 461, 495
BsiSI CCGG 2 cut(s) 462, 618
BslI CCNNNNNNNGG 2 cut(s) 83, 624
BsnI GGCC 3 cut(s) 291, 636, 1147
Bsp1286I GDGCHC 2 cut(s) 461, 495
Bsp13I TCCGGA 1 cut(s) 461
Bsp143I GATC 1 cut(s) 372
Bsp19I CCATGG 1 cut(s) 591
BspACI CCGC 2 cut(s) 288, 315
BspANI GGCC 3 cut(s) 291, 636, 1147
BspCNI CTCAG 4 cut(s) 345, 391, 809, 909
BspEI TCCGGA 1 cut(s) 461
BspLI GGNNCC 1 cut(s) 656
BspOI GCTAGC 1 cut(s) 329
BspQI GCTCTTC 1 cut(s) 315
BsrFI RCCGGY 1 cut(s) 617
BsrI ACTGG 2 cut(s) 656, 839
BssAI RCCGGY 1 cut(s) 617
BssECI CCNNGG 1 cut(s) 591
BssMI GATC 1 cut(s) 372
BssSI CACGAG 1 cut(s) 687
BssT1I CCWWGG 1 cut(s) 591
Bst2BI CACGAG 1 cut(s) 687
Bst6I CTCTTC 3 cut(s) 315, 920, 1152
BstC8I GCNNGC 8 cut(s) 223, 327, 386, 390, 615, 802, 884, 1021
BstDEI CTNAG 6 cut(s) 341, 353, 399, 555, 796, 917
BstDSI CCRYGG 1 cut(s) 591
BstF5I GGATG 2 cut(s) 97, 702
BstHHI GCGC 1 cut(s) 221
BstKTI GATC 1 cut(s) 375
BstMBI GATC 1 cut(s) 372
BstMWI GCNNNNNNNGC 4 cut(s) 30, 222, 255, 883
BstNSI RCATGY 2 cut(s) 163, 1122
BstV1I GCAGC 5 cut(s) 203, 526, 640, 874, 898
BstV2I GAAGAC 1 cut(s) 249
BsuRI GGCC 3 cut(s) 291, 636, 1147
BtgI CCRYGG 1 cut(s) 591
BtgZI GCGATG 1 cut(s) 407
BtsCI GGATG 2 cut(s) 97, 702
BtsI GCAGTG 1 cut(s) 283
BtsIMutI CAGTG 2 cut(s) 283, 369
Cac8I GCNNGC 8 cut(s) 223, 327, 386, 390, 615, 802, 884, 1021
CfoI GCGC 1 cut(s) 221
Cfr10I RCCGGY 1 cut(s) 617
Cfr13I GGNCC 1 cut(s) 974
CseI GACGC 1 cut(s) 1148
Csp6I GTAC 1 cut(s) 1128
CviAII CATG 9 cut(s) 56, 160, 262, 592, 632, 752, 778, 1024, 1119
CviQI GTAC 1 cut(s) 1128
DdeI CTNAG 6 cut(s) 341, 353, 399, 555, 796, 917
DpnI GATC 1 cut(s) 374
DpnII GATC 1 cut(s) 372
EaeI YGGCCR 2 cut(s) 289, 634
Eam1104I CTCTTC 3 cut(s) 315, 920, 1152
EarI CTCTTC 3 cut(s) 315, 920, 1152
Ecl136II GAGCTC 1 cut(s) 459
Eco130I CCWWGG 1 cut(s) 591
Eco147I AGGCCT 1 cut(s) 1147
Eco24I GRGCYC 1 cut(s) 461
Eco47I GGWCC 1 cut(s) 974
Eco53kI GAGCTC 1 cut(s) 459
Eco57I CTGAAG 1 cut(s) 170
EcoICRI GAGCTC 1 cut(s) 459
EcoT14I CCWWGG 1 cut(s) 591
EcoT38I GRGCYC 1 cut(s) 461
ErhI CCWWGG 1 cut(s) 591
FaeI CATG 9 cut(s) 59, 163, 265, 595, 635, 755, 781, 1027, 1122
FatI CATG 9 cut(s) 55, 159, 261, 591, 631, 751, 777, 1023, 1118
FauNDI CATATG 1 cut(s) 724
Fnu4HI GCNGC 6 cut(s) 217, 289, 540, 629, 863, 887
FokI GGATG 2 cut(s) 84, 689
FriOI GRGCYC 1 cut(s) 461
Fsp4HI GCNGC 6 cut(s) 217, 289, 540, 629, 863, 887
FspBI CTAG 4 cut(s) 326, 501, 624, 1143
GlaI GCGC 1 cut(s) 220
GluI GCNGC 6 cut(s) 217, 289, 540, 629, 863, 887
HaeIII GGCC 3 cut(s) 291, 636, 1147
HapII CCGG 2 cut(s) 462, 618
HgaI GACGC 1 cut(s) 1148
HhaI GCGC 1 cut(s) 221
Hin1II CATG 9 cut(s) 59, 163, 265, 595, 635, 755, 781, 1027, 1122
Hin6I GCGC 1 cut(s) 219
HinP1I GCGC 1 cut(s) 219
HincII GTYRAC 1 cut(s) 165
HindII GTYRAC 1 cut(s) 165
HinfI GANTC 4 cut(s) 508, 699, 819, 919
HpaI GTTAAC 1 cut(s) 165
HpaII CCGG 2 cut(s) 462, 618
HphI GGTGA 4 cut(s) 66, 517, 658, 793
Hpy166II GTNNAC 2 cut(s) 165, 283
Hpy188I TCNGA 5 cut(s) 150, 377, 513, 910, 924
Hpy188III TCNNGA 1 cut(s) 462
Hpy8I GTNNAC 2 cut(s) 165, 283
HpyAV CCTTC 8 cut(s) 238, 281, 397, 459, 1009, 1028, 1060, 1064
HpyCH4IV ACGT 1 cut(s) 747
HpyCH4V TGCA 5 cut(s) 249, 542, 686, 739, 751
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 222, 255, 883
HpyF3I CTNAG 6 cut(s) 341, 353, 399, 555, 796, 917
HpySE526I ACGT 1 cut(s) 747
Hsp92II CATG 9 cut(s) 59, 163, 265, 595, 635, 755, 781, 1027, 1122
HspAI GCGC 1 cut(s) 219
Kpn2I TCCGGA 1 cut(s) 461
KspAI GTTAAC 1 cut(s) 165
Kzo9I GATC 1 cut(s) 372
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 2 cut(s) 230, 464
Lsp1109I GCAGC 5 cut(s) 203, 526, 640, 874, 898
LweI GCATC 2 cut(s) 258, 726
MaeI CTAG 4 cut(s) 326, 501, 624, 1143
MaeII ACGT 1 cut(s) 747
MaeIII GTNAC 2 cut(s) 812, 929
MalI GATC 1 cut(s) 374
MboI GATC 1 cut(s) 372
MboII GAAGA 9 cut(s) 163, 198, 254, 332, 493, 742, 745, 937, 1169
MfeI CAATTG 1 cut(s) 827
MhlI GDGCHC 2 cut(s) 461, 495
MlsI TGGCCA 1 cut(s) 636
MluCI AATT 9 cut(s) 65, 672, 681, 693, 827, 940, 1028, 1107, 1165
MluNI TGGCCA 1 cut(s) 636
MlyI GAGTC 2 cut(s) 517, 928
Mox20I TGGCCA 1 cut(s) 636
MroI TCCGGA 1 cut(s) 461
MscI TGGCCA 1 cut(s) 636
MseI TTAA 4 cut(s) 68, 164, 1151, 1164
Msp20I TGGCCA 1 cut(s) 636
MspA1I CMGCKG 2 cut(s) 216, 865
MspI CCGG 2 cut(s) 462, 618
MunI CAATTG 1 cut(s) 827
MwoI GCNNNNNNNGC 4 cut(s) 30, 222, 255, 883
NcoI CCATGG 1 cut(s) 591
NdeI CATATG 1 cut(s) 724
NdeII GATC 1 cut(s) 372
NheI GCTAGC 1 cut(s) 325
NlaIII CATG 9 cut(s) 59, 163, 265, 595, 635, 755, 781, 1027, 1122
NlaIV GGNNCC 1 cut(s) 656
NmuCI GTSAC 1 cut(s) 929
NspI RCATGY 2 cut(s) 163, 1122
PceI AGGCCT 1 cut(s) 1147
PciI ACATGT 1 cut(s) 159
PciSI GCTCTTC 1 cut(s) 315
PfeI GAWTC 2 cut(s) 699, 819
PkrI GCNGC 6 cut(s) 218, 290, 541, 630, 864, 888
PleI GAGTC 2 cut(s) 516, 927
PpsI GAGTC 2 cut(s) 516, 927
PscI ACATGT 1 cut(s) 159
PshBI ATTAAT 1 cut(s) 1164
PsiI TTATAA 2 cut(s) 585, 939
Psp124BI GAGCTC 1 cut(s) 461
PspN4I GGNNCC 1 cut(s) 656
PspPI GGNCC 1 cut(s) 974
PvuII CAGCTG 2 cut(s) 216, 865
RsaI GTAC 1 cut(s) 1129
RsaNI GTAC 1 cut(s) 1128
SacI GAGCTC 1 cut(s) 461
SapI GCTCTTC 1 cut(s) 315
SaqAI TTAA 4 cut(s) 68, 164, 1151, 1164
SatI GCNGC 6 cut(s) 217, 289, 540, 629, 863, 887
Sau3AI GATC 1 cut(s) 372
Sau96I GGNCC 1 cut(s) 974
SchI GAGTC 2 cut(s) 517, 928
SduI GDGCHC 2 cut(s) 461, 495
SfaNI GCATC 2 cut(s) 258, 726
SgrAI CRCCGGYG 1 cut(s) 617
SinI GGWCC 1 cut(s) 974
Sse9I AATT 9 cut(s) 65, 672, 681, 693, 827, 940, 1028, 1107, 1165
SseBI AGGCCT 1 cut(s) 1147
SsiI CCGC 2 cut(s) 288, 315
SspMI CTAG 4 cut(s) 326, 501, 624, 1143
SstI GAGCTC 1 cut(s) 461
StuI AGGCCT 1 cut(s) 1147
StyI CCWWGG 1 cut(s) 591
TaiI ACGT 1 cut(s) 750
TaqI TCGA 2 cut(s) 489, 843
TasI AATT 9 cut(s) 65, 672, 681, 693, 827, 940, 1028, 1107, 1165
TauI GCSGC 1 cut(s) 291
TfiI GAWTC 2 cut(s) 699, 819
Tru1I TTAA 4 cut(s) 68, 164, 1151, 1164
Tru9I TTAA 4 cut(s) 68, 164, 1151, 1164
TscAI CASTG 2 cut(s) 290, 369
TseFI GTSAC 1 cut(s) 929
TseI GCWGC 5 cut(s) 216, 539, 628, 862, 886
Tsp45I GTSAC 1 cut(s) 929
TspDTI ATGAA 7 cut(s) 250, 255, 691, 758, 884, 927, 1040
TspGWI ACGGA 1 cut(s) 831
TspRI CASTG 2 cut(s) 290, 369
VpaK11BI GGWCC 1 cut(s) 974
VspI ATTAAT 1 cut(s) 1164
XceI RCATGY 2 cut(s) 163, 1122
XspI CTAG 4 cut(s) 326, 501, 624, 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.